Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:57:08 (32238): wrapper (7.7.26015): starting
05:57:08 (32238): wrapper: running run_atlas (--nthreads 8)
[2025-06-06 05:57:08] Arguments: --nthreads 8
[2025-06-06 05:57:08] Threads: 8
[2025-06-06 05:57:08] Checking for CVMFS
[2025-06-06 05:57:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 05:57:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 05:57:09] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 05:57:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 05:57:09] 2.11.2.0 2931 38363 78420 146847 0 1 19254517 20275201 1 130560 0 11933724 99.976 7043544 8517 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-06 05:57:09] CVMFS is ok
[2025-06-06 05:57:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 05:57:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 05:57:09] Further information can be found at the LHC@home message board.
[2025-06-06 05:57:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 05:57:09] Checking for apptainer binary...
[2025-06-06 05:57:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 05:57:09] Running /usr/bin/apptainer --version
[2025-06-06 05:57:09] apptainer version 1.3.2-1.el7
[2025-06-06 05:57:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 05:57:11] c-115-5.aglt2.org
[2025-06-06 05:57:11] apptainer works
[2025-06-06 05:57:11] Set ATHENA_PROC_NUMBER=8
[2025-06-06 05:57:11] Set ATHENA_CORE_NUMBER=8
[2025-06-06 05:57:11] Starting ATLAS job with PandaID=6669237907
[2025-06-06 05:57:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 08:25:26]  *** The last 200 lines of the pilot log: ***
[2025-06-06 08:25:26] 2025-06-06 12:25:06,642 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 08:25:26] 2025-06-06 12:25:09,146 | INFO     | monitor loop #656: job 0:6669237907 is in state 'finished'
[2025-06-06 08:25:26] 2025-06-06 12:25:09,147 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 08:25:26] 2025-06-06 12:25:11,650 | INFO     | monitor loop #657: job 0:6669237907 is in state 'finished'
[2025-06-06 08:25:26] 2025-06-06 12:25:11,650 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 08:25:26] 2025-06-06 12:25:12,010 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-06 08:25:26] 2025-06-06 12:25:12,011 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6669237907/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 08:25:26] 2025-06-06 12:25:12,013 | INFO     | extracted standard info from prmon json
[2025-06-06 08:25:26] 2025-06-06 12:25:12,014 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 08:25:26] 2025-06-06 12:25:12,014 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 08:25:26] 2025-06-06 12:25:12,015 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 08:25:26] 2025-06-06 12:25:12,015 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 08:25:26] 2025-06-06 12:25:12,019 | INFO     | fitting pss+swap vs Time
[2025-06-06 08:25:26] 2025-06-06 12:25:12,019 | INFO     | sum of square deviations: 945282840.0
[2025-06-06 08:25:26] 2025-06-06 12:25:12,020 | INFO     | sum of deviations: 7420645059.000002
[2025-06-06 08:25:26] 2025-06-06 12:25:12,020 | INFO     | mean x: 1749208275.0
[2025-06-06 08:25:26] 2025-06-06 12:25:12,020 | INFO     | mean y: 2501308.1172413793
[2025-06-06 08:25:26] 2025-06-06 12:25:12,020 | INFO     | -- intersect: -13729107046.309956
[2025-06-06 08:25:26] 2025-06-06 12:25:12,020 | INFO     | intersect: -13729107046.309956
[2025-06-06 08:25:26] 2025-06-06 12:25:12,021 | INFO     | chi2: 1.5999271967504844
[2025-06-06 08:25:26] 2025-06-06 12:25:12,021 | INFO     | sum of square deviations: 850825255.0
[2025-06-06 08:25:26] 2025-06-06 12:25:12,022 | INFO     | sum of deviations: 7099734947.500002
[2025-06-06 08:25:26] 2025-06-06 12:25:12,022 | INFO     | mean x: 1749208122.5
[2025-06-06 08:25:26] 2025-06-06 12:25:12,022 | INFO     | mean y: 2500789.8357142857
[2025-06-06 08:25:26] 2025-06-06 12:25:12,022 | INFO     | -- intersect: -14593814922.212717
[2025-06-06 08:25:26] 2025-06-06 12:25:12,022 | INFO     | intersect: -14593814922.212717
[2025-06-06 08:25:26] 2025-06-06 12:25:12,022 | INFO     | chi2: 1.6013056585963463
[2025-06-06 08:25:26] 2025-06-06 12:25:12,022 | INFO     | current chi2=1.6013056585963463 (change=-0.08615778572059958 %)
[2025-06-06 08:25:26] 2025-06-06 12:25:12,023 | INFO     | right removable region: 139
[2025-06-06 08:25:26] 2025-06-06 12:25:12,023 | INFO     | sum of square deviations: 850825255.0
[2025-06-06 08:25:26] 2025-06-06 12:25:12,023 | INFO     | sum of deviations: -14134343061.999998
[2025-06-06 08:25:26] 2025-06-06 12:25:12,024 | INFO     | mean x: 1749208427.5
[2025-06-06 08:25:26] 2025-06-06 12:25:12,024 | INFO     | mean y: 2535535.785714286
[2025-06-06 08:25:26] 2025-06-06 12:25:12,024 | INFO     | -- intersect: 29061278040.116463
[2025-06-06 08:25:26] 2025-06-06 12:25:12,024 | INFO     | intersect: 29061278040.116463
[2025-06-06 08:25:26] 2025-06-06 12:25:12,024 | INFO     | chi2: 0.12537302777852433
[2025-06-06 08:25:26] 2025-06-06 12:25:12,024 | INFO     | current chi2=0.12537302777852433 (change=92.16382920215608 %)
[2025-06-06 08:25:26] 2025-06-06 12:25:12,025 | INFO     | sum of square deviations: 762879420.0
[2025-06-06 08:25:26] 2025-06-06 12:25:12,025 | INFO     | sum of deviations: -11555498949.0
[2025-06-06 08:25:26] 2025-06-06 12:25:12,025 | INFO     | mean x: 1749208580.0
[2025-06-06 08:25:26] 2025-06-06 12:25:12,025 | INFO     | mean y: 2530992.1407407406
[2025-06-06 08:25:26] 2025-06-06 12:25:12,025 | INFO     | -- intersect: 26498170247.649536
[2025-06-06 08:25:26] 2025-06-06 12:25:12,026 | INFO     | intersect: 26498170247.649536
[2025-06-06 08:25:26] 2025-06-06 12:25:12,026 | INFO     | chi2: 0.11257994621702272
[2025-06-06 08:25:26] 2025-06-06 12:25:12,026 | INFO     | current chi2=0.11257994621702272 (change=10.204014203199286 %)
[2025-06-06 08:25:26] 2025-06-06 12:25:12,026 | INFO     | left removable region: 20
[2025-06-06 08:25:26] 2025-06-06 12:25:12,026 | INFO     | sum of square deviations: 522502820.0
[2025-06-06 08:25:26] 2025-06-06 12:25:12,027 | INFO     | sum of deviations: -1855181532.0
[2025-06-06 08:25:26] 2025-06-06 12:25:12,027 | INFO     | mean x: 1749208702.0
[2025-06-06 08:25:26] 2025-06-06 12:25:12,027 | INFO     | mean y: 2511745.3529411764
[2025-06-06 08:25:26] 2025-06-06 12:25:12,027 | INFO     | -- intersect: 6213195315.566192
[2025-06-06 08:25:26] 2025-06-06 12:25:12,027 | INFO     | intersect: 6213195315.566192
[2025-06-06 08:25:26] 2025-06-06 12:25:12,028 | INFO     | chi2: 0.04717865177785648
[2025-06-06 08:25:26] 2025-06-06 12:25:12,028 | INFO     | -- intersect: 6213195315.566192
[2025-06-06 08:25:26] 2025-06-06 12:25:12,028 | INFO     | current memory leak: -3.55 B/s (using 119 data points, chi2=0.05)
[2025-06-06 08:25:26] 2025-06-06 12:25:12,029 | INFO     | ..............................
[2025-06-06 08:25:26] 2025-06-06 12:25:12,029 | INFO     | . Timing measurements:
[2025-06-06 08:25:26] 2025-06-06 12:25:12,029 | INFO     | . get job = 0 s
[2025-06-06 08:25:26] 2025-06-06 12:25:12,029 | INFO     | . initial setup = 2 s
[2025-06-06 08:25:26] 2025-06-06 12:25:12,029 | INFO     | . payload setup = 11 s
[2025-06-06 08:25:26] 2025-06-06 12:25:12,029 | INFO     | . stage-in = 0 s
[2025-06-06 08:25:26] 2025-06-06 12:25:12,029 | INFO     | . payload execution = 8821 s
[2025-06-06 08:25:26] 2025-06-06 12:25:12,029 | INFO     | . stage-out = 1 s
[2025-06-06 08:25:26] 2025-06-06 12:25:12,029 | INFO     | . log creation = 0 s
[2025-06-06 08:25:26] 2025-06-06 12:25:12,029 | INFO     | ..............................
[2025-06-06 08:25:26] 2025-06-06 12:25:12,117 | INFO     | 
[2025-06-06 08:25:26] 2025-06-06 12:25:12,118 | INFO     | job summary report
[2025-06-06 08:25:26] 2025-06-06 12:25:12,118 | INFO     | --------------------------------------------------
[2025-06-06 08:25:26] 2025-06-06 12:25:12,118 | INFO     | PanDA job id: 6669237907
[2025-06-06 08:25:26] 2025-06-06 12:25:12,118 | INFO     | task id: 44871837
[2025-06-06 08:25:26] 2025-06-06 12:25:12,118 | INFO     | errors: (none)
[2025-06-06 08:25:26] 2025-06-06 12:25:12,119 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 08:25:26] 2025-06-06 12:25:12,119 | INFO     | pilot state: finished 
[2025-06-06 08:25:26] 2025-06-06 12:25:12,119 | INFO     | transexitcode: 0
[2025-06-06 08:25:26] 2025-06-06 12:25:12,119 | INFO     | exeerrorcode: 0
[2025-06-06 08:25:26] 2025-06-06 12:25:12,119 | INFO     | exeerrordiag: 
[2025-06-06 08:25:26] 2025-06-06 12:25:12,120 | INFO     | exitcode: 0
[2025-06-06 08:25:26] 2025-06-06 12:25:12,120 | INFO     | exitmsg: OK
[2025-06-06 08:25:26] 2025-06-06 12:25:12,120 | INFO     | cpuconsumptiontime: 66795 s
[2025-06-06 08:25:26] 2025-06-06 12:25:12,120 | INFO     | nevents: 400
[2025-06-06 08:25:26] 2025-06-06 12:25:12,120 | INFO     | neventsw: 0
[2025-06-06 08:25:26] 2025-06-06 12:25:12,120 | INFO     | pid: 11506
[2025-06-06 08:25:26] 2025-06-06 12:25:12,121 | INFO     | pgrp: 11506
[2025-06-06 08:25:26] 2025-06-06 12:25:12,121 | INFO     | corecount: 8
[2025-06-06 08:25:26] 2025-06-06 12:25:12,121 | INFO     | event service: False
[2025-06-06 08:25:26] 2025-06-06 12:25:12,122 | INFO     | sizes: {0: 2397219, 1: 2397418, 6: 2397624, 11: 2397652, 8836: 2425663, 8837: 2434604, 8839: 2434788, 8845: 2434958}
[2025-06-06 08:25:26] 2025-06-06 12:25:12,122 | INFO     | --------------------------------------------------
[2025-06-06 08:25:26] 2025-06-06 12:25:12,122 | INFO     | 
[2025-06-06 08:25:26] 2025-06-06 12:25:12,122 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 08:25:26] 2025-06-06 12:25:12,151 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 08:25:26] 2025-06-06 12:25:12,151 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 08:25:26] 2025-06-06 12:25:12,152 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 08:25:26] 2025-06-06 12:25:12,152 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 08:25:26] 2025-06-06 12:25:12,152 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 08:25:26] 2025-06-06 12:25:12,152 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 08:25:26] 2025-06-06 12:25:12,152 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 08:25:26] 2025-06-06 12:25:12,152 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 08:25:26] 2025-06-06 12:25:12,153 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 08:25:26] 2025-06-06 12:25:12,153 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 08:25:26] 2025-06-06 12:25:12,153 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 08:25:26] 2025-06-06 12:25:12,153 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 08:25:26] 2025-06-06 12:25:12,153 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 08:25:26] 2025-06-06 12:25:12,153 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 08:25:26] 2025-06-06 12:25:12,154 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 08:25:26] 2025-06-06 12:25:12,154 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 08:25:26] 2025-06-06 12:25:12,154 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 08:25:26] 2025-06-06 12:25:12,154 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 08:25:26] 2025-06-06 12:25:12,154 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 08:25:26] 2025-06-06 12:25:12,154 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 08:25:26] 2025-06-06 12:25:12,155 | INFO     | job 6669237907 has completed (purged errors)
[2025-06-06 08:25:26] 2025-06-06 12:25:12,155 | INFO     | overall cleanup function is called
[2025-06-06 08:25:26] 2025-06-06 12:25:13,163 | INFO     | --- collectZombieJob: --- 10, [11506]
[2025-06-06 08:25:26] 2025-06-06 12:25:13,163 | INFO     | zombie collector waiting for pid 11506
[2025-06-06 08:25:26] 2025-06-06 12:25:13,163 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 08:25:26] 2025-06-06 12:25:13,164 | INFO     | collected zombie processes
[2025-06-06 08:25:26] 2025-06-06 12:25:13,164 | INFO     | will attempt to kill all subprocesses of pid=11506
[2025-06-06 08:25:26] 2025-06-06 12:25:13,252 | INFO     | process IDs to be killed: [11506] (in reverse order)
[2025-06-06 08:25:26] 2025-06-06 12:25:13,307 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 08:25:26] 2025-06-06 12:25:13,308 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 08:25:26] 2025-06-06 12:25:13,314 | INFO     | did not find any defunct processes belonging to 11506
[2025-06-06 08:25:26] 2025-06-06 12:25:13,317 | INFO     | did not find any defunct processes belonging to 11506
[2025-06-06 08:25:26] 2025-06-06 12:25:13,318 | INFO     | ready for new job
[2025-06-06 08:25:26] 2025-06-06 12:25:13,318 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 08:25:26] 2025-06-06 12:25:13,320 | INFO     | **************************************
[2025-06-06 08:25:26] 2025-06-06 12:25:13,320 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 08:25:26] 2025-06-06 12:25:13,320 | INFO     | **************************************
[2025-06-06 08:25:26] 2025-06-06 12:25:13,320 | INFO     | 
[2025-06-06 08:25:26] 2025-06-06 12:25:13,321 | INFO     | architecture information:
[2025-06-06 08:25:26] 2025-06-06 12:25:13,321 | INFO     | executing command: cat /etc/os-release
[2025-06-06 08:25:26] 2025-06-06 12:25:13,339 | INFO     | cat /etc/os-release:
[2025-06-06 08:25:26] NAME="CentOS Linux"
[2025-06-06 08:25:26] VERSION="7 (Core)"
[2025-06-06 08:25:26] ID="centos"
[2025-06-06 08:25:26] ID_LIKE="rhel fedora"
[2025-06-06 08:25:26] VERSION_ID="7"
[2025-06-06 08:25:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 08:25:26] ANSI_COLOR="0;31"
[2025-06-06 08:25:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 08:25:26] HOME_URL="https://www.centos.org/"
[2025-06-06 08:25:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 08:25:26] 
[2025-06-06 08:25:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 08:25:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 08:25:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 08:25:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 08:25:26] 
[2025-06-06 08:25:26] 2025-06-06 12:25:13,340 | INFO     | **************************************
[2025-06-06 08:25:26] 2025-06-06 12:25:13,843 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 08:25:26] 2025-06-06 12:25:13,863 | INFO     | sufficient remaining disk space (18600689664 B)
[2025-06-06 08:25:26] 2025-06-06 12:25:13,863 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 08:25:26] 2025-06-06 12:25:13,864 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 08:25:26] 2025-06-06 12:25:13,864 | INFO     | update_server=False
[2025-06-06 08:25:26] 2025-06-06 12:25:13,864 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 08:25:26] 2025-06-06 12:25:13,865 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 08:25:26] 2025-06-06 12:25:13,865 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 08:25:26] 2025-06-06 12:25:13,866 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 08:25:26] 2025-06-06 12:25:13,866 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 08:25:26] 2025-06-06 12:25:13,866 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 08:25:26] 2025-06-06 12:25:14,154 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 08:25:26] 2025-06-06 12:25:14,154 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 08:25:26] 2025-06-06 12:25:14,155 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 08:25:26] 2025-06-06 12:25:14,155 | INFO     | will abort loop
[2025-06-06 08:25:26] 2025-06-06 12:25:14,232 | INFO     | all job control threads have been joined
[2025-06-06 08:25:26] 2025-06-06 12:25:14,533 | INFO     | all payload control threads have been joined
[2025-06-06 08:25:26] 2025-06-06 12:25:14,575 | INFO     | all data control threads have been joined
[2025-06-06 08:25:26] 2025-06-06 12:25:14,708 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 08:25:26] 2025-06-06 12:25:14,870 | INFO     | [job] retrieve thread has finished
[2025-06-06 08:25:26] 2025-06-06 12:25:14,871 | INFO     | [job] queue monitor thread has finished
[2025-06-06 08:25:26] 2025-06-06 12:25:15,160 | INFO     | [job] job monitor thread has finished
[2025-06-06 08:25:26] 2025-06-06 12:25:15,237 | INFO     | [job] control thread has finished
[2025-06-06 08:25:26] 2025-06-06 12:25:15,467 | INFO     | [job] validate thread has finished
[2025-06-06 08:25:26] 2025-06-06 12:25:15,536 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 08:25:26] 2025-06-06 12:25:15,537 | INFO     | [payload] control thread has finished
[2025-06-06 08:25:26] 2025-06-06 12:25:15,581 | INFO     | [data] control thread has finished
[2025-06-06 08:25:26] 2025-06-06 12:25:15,679 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 08:25:26] 2025-06-06 12:25:16,021 | INFO     | [payload] failed_post thread has finished
[2025-06-06 08:25:26] 2025-06-06 12:25:16,025 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 08:25:26] 2025-06-06 12:25:16,054 | INFO     | [data] copytool_in thread has finished
[2025-06-06 08:25:26] 2025-06-06 12:25:16,148 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 08:25:26] 2025-06-06 12:25:16,421 | INFO     | [payload] validate_post thread has finished
[2025-06-06 08:25:26] 2025-06-06 12:25:16,662 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 08:25:26] 2025-06-06 12:25:16,711 | INFO     | [data] copytool_out thread has finished
[2025-06-06 08:25:26] 2025-06-06 12:25:20,668 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 08:25:26] 2025-06-06 12:25:20,765 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140489226581824)>', '<ExcThread(monitor, started 140488497682176)>']
[2025-06-06 08:25:26] 2025-06-06 12:25:20,901 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 08:25:26] 2025-06-06 12:25:20,901 | INFO     | [monitor] control thread has ended
[2025-06-06 08:25:26] 2025-06-06 12:25:25,791 | INFO     | all workflow threads have been joined
[2025-06-06 08:25:26] 2025-06-06 12:25:25,791 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 08:25:26] 2025-06-06 12:25:25,792 | INFO     | traces error code: 0
[2025-06-06 08:25:26] 2025-06-06 12:25:25,792 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 08:25:26] 2025-06-06 12:25:25,894 [wrapper] ==== pilot stdout END ====
[2025-06-06 08:25:26] 2025-06-06 12:25:25,900 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 08:25:26] 2025-06-06 12:25:25,905 [wrapper] pilotpid: 3996
[2025-06-06 08:25:26] 2025-06-06 12:25:25,910 [wrapper] Pilot exit status: 0
[2025-06-06 08:25:26] 2025-06-06 12:25:25,929 [wrapper] pandaids: 6669237907
[2025-06-06 08:25:26] 2025-06-06 12:25:25,974 [wrapper] cleanup supervisor_pilot 30235 3997
[2025-06-06 08:25:26] 2025-06-06 12:25:25,979 [wrapper] Test setup, not cleaning
[2025-06-06 08:25:26] 2025-06-06 12:25:25,984 [wrapper] apfmon messages muted
[2025-06-06 08:25:26] 2025-06-06 12:25:25,989 [wrapper] ==== wrapper stdout END ====
[2025-06-06 08:25:26] 2025-06-06 12:25:25,993 [wrapper] ==== wrapper stderr END ====
[2025-06-06 08:25:26]  *** Error codes and diagnostics ***
[2025-06-06 08:25:26]     "exeErrorCode": 0,
[2025-06-06 08:25:26]     "exeErrorDiag": "",
[2025-06-06 08:25:26]     "pilotErrorCode": 0,
[2025-06-06 08:25:26]     "pilotErrorDiag": "",
[2025-06-06 08:25:26]  *** Listing of results directory ***
[2025-06-06 08:25:26] total 419768
[2025-06-06 08:25:26] -rw-r--r-- 1 boincer umatlas    495897 May 29 00:11 pilot3.tar.gz
[2025-06-06 08:25:26] -rw-r--r-- 1 boincer umatlas      5111 May 29 00:15 queuedata.json
[2025-06-06 08:25:26] -rwx------ 1 boincer umatlas     37140 May 29 00:17 runpilot2-wrapper.sh
[2025-06-06 08:25:26] -rw-r--r-- 1 boincer umatlas       100 Jun  6 05:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 08:25:26] -rwxr-xr-x 1 boincer umatlas      7986 Jun  6 05:57 run_atlas
[2025-06-06 08:25:26] -rw-r--r-- 1 boincer umatlas       105 Jun  6 05:57 job.xml
[2025-06-06 08:25:26] -rw-r--r-- 2 boincer umatlas 222842233 Jun  6 05:57 EVNT.44871834._003686.pool.root.1
[2025-06-06 08:25:26] -rw-r--r-- 2 boincer umatlas     15093 Jun  6 05:57 start_atlas.sh
[2025-06-06 08:25:26] drwxrwx--x 2 boincer umatlas      4096 Jun  6 05:57 shared
[2025-06-06 08:25:26] -rw-r--r-- 2 boincer umatlas    508879 Jun  6 05:57 input.tar.gz
[2025-06-06 08:25:26] -rw-r--r-- 1 boincer umatlas         0 Jun  6 05:57 boinc_lockfile
[2025-06-06 08:25:26] -rw-r--r-- 1 boincer umatlas      2558 Jun  6 05:57 pandaJob.out
[2025-06-06 08:25:26] -rw------- 1 boincer umatlas    987967 Jun  6 05:57 agis_schedconf.cvmfs.json
[2025-06-06 08:25:26] -rw------- 1 boincer umatlas   1598969 Jun  6 05:57 agis_ddmendpoints.agis.ALL.json
[2025-06-06 08:25:26] drwx------ 4 boincer umatlas      4096 Jun  6 05:57 pilot3
[2025-06-06 08:25:26] -rw-r--r-- 1 boincer umatlas      5824 Jun  6 08:20 init_data.xml
[2025-06-06 08:25:26] -rw------- 1 boincer umatlas        95 Jun  6 08:24 pilot_heartbeat.json
[2025-06-06 08:25:26] -rw------- 1 boincer umatlas 200894286 Jun  6 08:24 HITS.44871837._094878.pool.root.1
[2025-06-06 08:25:26] -rw-r--r-- 1 boincer umatlas       529 Jun  6 08:24 boinc_task_state.xml
[2025-06-06 08:25:26] -rw------- 1 boincer umatlas      1049 Jun  6 08:24 memory_monitor_summary.json
[2025-06-06 08:25:26] -rw------- 1 boincer umatlas    332660 Jun  6 08:25 log.44871837._094878.job.log.tgz.1
[2025-06-06 08:25:26] -rw------- 1 boincer umatlas      7752 Jun  6 08:25 heartbeat.json
[2025-06-06 08:25:26] -rw-r--r-- 1 boincer umatlas        27 Jun  6 08:25 wrapper_checkpoint.txt
[2025-06-06 08:25:26] -rw-r--r-- 1 boincer umatlas      8192 Jun  6 08:25 boinc_mmap_file
[2025-06-06 08:25:26] -rw------- 1 boincer umatlas      4662 Jun  6 08:25 pilotlog.txt
[2025-06-06 08:25:26] -rw------- 1 boincer umatlas    801069 Jun  6 08:25 log.44871837._094878.job.log.1
[2025-06-06 08:25:26] -rw------- 1 boincer umatlas       357 Jun  6 08:25 output.list
[2025-06-06 08:25:26] -rw-r--r-- 1 boincer umatlas       620 Jun  6 08:25 runtime_log
[2025-06-06 08:25:26] -rw------- 1 boincer umatlas   1157120 Jun  6 08:25 result.tar.gz
[2025-06-06 08:25:26] -rw-r--r-- 1 boincer umatlas      8654 Jun  6 08:25 runtime_log.err
[2025-06-06 08:25:26] -rw------- 1 boincer umatlas       660 Jun  6 08:25 f9PLDmrsje7n9Rq4apOajLDm4fhM0noT9bVof3QYDmmcUKDmoxauRn.diag
[2025-06-06 08:25:26] -rw-r--r-- 1 boincer umatlas     21068 Jun  6 08:25 stderr.txt
[2025-06-06 08:25:26] HITS file was successfully produced:
[2025-06-06 08:25:26] -rw------- 1 boincer umatlas 200894286 Jun  6 08:24 shared/HITS.pool.root.1
[2025-06-06 08:25:26]  *** Contents of shared directory: ***
[2025-06-06 08:25:26] total 415460
[2025-06-06 08:25:26] -rw-r--r-- 2 boincer umatlas 222842233 Jun  6 05:57 ATLAS.root_0
[2025-06-06 08:25:26] -rw-r--r-- 2 boincer umatlas     15093 Jun  6 05:57 start_atlas.sh
[2025-06-06 08:25:26] -rw-r--r-- 2 boincer umatlas    508879 Jun  6 05:57 input.tar.gz
[2025-06-06 08:25:26] -rw------- 1 boincer umatlas 200894286 Jun  6 08:24 HITS.pool.root.1
[2025-06-06 08:25:26] -rw------- 1 boincer umatlas   1157120 Jun  6 08:25 result.tar.gz
08:25:27 (32238): run_atlas exited; CPU time 66728.336742
08:25:27 (32238): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN