Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:54:49 (2940769): wrapper (7.7.26015): starting
05:54:49 (2940769): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 05:54:49] Arguments: --nthreads 12
[2025-06-06 05:54:49] Threads: 12
[2025-06-06 05:54:49] Checking for CVMFS
[2025-06-06 05:54:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 05:54:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 05:54:49] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 05:54:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 05:54:50] 2.12.6.0 40552 3524 211324 146847 1 1046 20141998 32935937 9374 16776704 0 9541932 99.387 16083135 37490 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-06 05:54:50] CVMFS is ok
[2025-06-06 05:54:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 05:54:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 05:54:50] Further information can be found at the LHC@home message board.
[2025-06-06 05:54:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 05:54:50] Checking for apptainer binary...
[2025-06-06 05:54:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 05:54:50] Running /usr/bin/apptainer --version
[2025-06-06 05:54:50] apptainer version 1.4.1-1.el9
[2025-06-06 05:54:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 05:54:50] c6-1-26-4.aglt2.org
[2025-06-06 05:54:50] apptainer works
[2025-06-06 05:54:50] Set ATHENA_PROC_NUMBER=12
[2025-06-06 05:54:50] Set ATHENA_CORE_NUMBER=12
[2025-06-06 05:54:50] Starting ATLAS job with PandaID=6677469491
[2025-06-06 05:54:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 06:46:50]  *** The last 200 lines of the pilot log: ***
[2025-06-06 06:46:50]  domain=
[2025-06-06 06:46:50]  filesize=349777
[2025-06-06 06:46:50]  filetype=log
[2025-06-06 06:46:50]  guid=c4317671-8cac-4d67-bb80-374c9674f49b
[2025-06-06 06:46:50]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-06 06:46:50]  is_altstaged=None
[2025-06-06 06:46:50]  is_tar=False
[2025-06-06 06:46:50]  lfn=log.45006595._020192.job.log.tgz.1
[2025-06-06 06:46:50]  mtime=0
[2025-06-06 06:46:50]  protocol_id=None
[2025-06-06 06:46:50]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 06:46:50]  replicas=None
[2025-06-06 06:46:50]  scope=mc23_13p6TeV
[2025-06-06 06:46:50]  status=None
[2025-06-06 06:46:50]  status_code=0
[2025-06-06 06:46:50]  storage_token=
[2025-06-06 06:46:50]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677469491/log.45006595._020192.job.log.tgz.1
[2025-06-06 06:46:50]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c3/c3/log.45006595._020192.job.log.tgz.1
[2025-06-06 06:46:50]  workdir=None
[2025-06-06 06:46:50] ]
[2025-06-06 06:46:50] 2025-06-06 10:46:26,203 | INFO     | transferring file log.45006595._020192.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677469491/log.45006595._020192.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-06 06:46:50] 2025-06-06 10:46:26,203 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677469491/log.45006595._020192.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._020192.job
[2025-06-06 06:46:50] 2025-06-06 10:46:26,218 | INFO     | adding to output.list: log.45006595._020192.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c3/c3/log.45006595._020192.job.log.tg
[2025-06-06 06:46:50] 2025-06-06 10:46:26,219 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 06:46:50] 2025-06-06 10:46:26,219 | INFO     | summary of transferred files:
[2025-06-06 06:46:50] 2025-06-06 10:46:26,219 | INFO     |  -- lfn=log.45006595._020192.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 06:46:50] 2025-06-06 10:46:26,219 | INFO     | stage-out finished correctly
[2025-06-06 06:46:50] 2025-06-06 10:46:26,293 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 06:46:50] 2025-06-06 10:46:26,556 | INFO     | job 6677469491 has state=finished
[2025-06-06 06:46:50] 2025-06-06 10:46:26,556 | INFO     | preparing for final server update for job 6677469491 in state='finished'
[2025-06-06 06:46:50] 2025-06-06 10:46:26,557 | INFO     | this job has now completed (state=finished)
[2025-06-06 06:46:50] 2025-06-06 10:46:26,557 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 06:46:50] 2025-06-06 10:46:26,557 | INFO     | log transfer has been attempted: DONE
[2025-06-06 06:46:50] 2025-06-06 10:46:26,557 | INFO     | job 6677469491 has finished - writing final server update
[2025-06-06 06:46:50] 2025-06-06 10:46:26,557 | INFO     | total number of processed events: 400 (read)
[2025-06-06 06:46:50] 2025-06-06 10:46:26,573 | INFO     | executing command: lscpu
[2025-06-06 06:46:50] 2025-06-06 10:46:26,641 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 06:46:50] 2025-06-06 10:46:28,118 | INFO     | monitor loop #231: job 0:6677469491 is in state 'finished'
[2025-06-06 06:46:50] 2025-06-06 10:46:28,119 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 06:46:50] 2025-06-06 10:46:30,455 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-06 06:46:50] 2025-06-06 10:46:30,456 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677469491/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 06:46:50] 2025-06-06 10:46:30,457 | INFO     | extracted standard info from prmon json
[2025-06-06 06:46:50] 2025-06-06 10:46:30,457 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 06:46:50] 2025-06-06 10:46:30,457 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 06:46:50] 2025-06-06 10:46:30,458 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 06:46:50] 2025-06-06 10:46:30,458 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 06:46:50] 2025-06-06 10:46:30,460 | INFO     | fitting pss+swap vs Time
[2025-06-06 06:46:50] 2025-06-06 10:46:30,460 | INFO     | sum of square deviations: 26400495.0
[2025-06-06 06:46:50] 2025-06-06 10:46:30,461 | INFO     | sum of deviations: -5746701297.999999
[2025-06-06 06:46:50] 2025-06-06 10:46:30,461 | INFO     | mean x: 1749205343.5
[2025-06-06 06:46:50] 2025-06-06 10:46:30,461 | INFO     | mean y: 2560459.6363636362
[2025-06-06 06:46:50] 2025-06-06 10:46:30,461 | INFO     | -- intersect: 380759081046.08685
[2025-06-06 06:46:50] 2025-06-06 10:46:30,461 | INFO     | intersect: 380759081046.08685
[2025-06-06 06:46:50] 2025-06-06 10:46:30,461 | INFO     | chi2: 0.07829118065758948
[2025-06-06 06:46:50] 2025-06-06 10:46:30,461 | INFO     | -- intersect: 380759081046.08685
[2025-06-06 06:46:50] 2025-06-06 10:46:30,462 | INFO     | current memory leak: -217.67 B/s (using 44 data points, chi2=0.08)
[2025-06-06 06:46:50] 2025-06-06 10:46:30,462 | INFO     | ..............................
[2025-06-06 06:46:50] 2025-06-06 10:46:30,462 | INFO     | . Timing measurements:
[2025-06-06 06:46:50] 2025-06-06 10:46:30,462 | INFO     | . get job = 0 s
[2025-06-06 06:46:50] 2025-06-06 10:46:30,462 | INFO     | . initial setup = 2 s
[2025-06-06 06:46:50] 2025-06-06 10:46:30,463 | INFO     | . payload setup = 6 s
[2025-06-06 06:46:50] 2025-06-06 10:46:30,463 | INFO     | . stage-in = 0 s
[2025-06-06 06:46:50] 2025-06-06 10:46:30,463 | INFO     | . payload execution = 3058 s
[2025-06-06 06:46:50] 2025-06-06 10:46:30,463 | INFO     | . stage-out = 0 s
[2025-06-06 06:46:50] 2025-06-06 10:46:30,463 | INFO     | . log creation = 0 s
[2025-06-06 06:46:50] 2025-06-06 10:46:30,463 | INFO     | ..............................
[2025-06-06 06:46:50] 2025-06-06 10:46:30,571 | INFO     | 
[2025-06-06 06:46:50] 2025-06-06 10:46:30,571 | INFO     | job summary report
[2025-06-06 06:46:50] 2025-06-06 10:46:30,572 | INFO     | --------------------------------------------------
[2025-06-06 06:46:50] 2025-06-06 10:46:30,572 | INFO     | PanDA job id: 6677469491
[2025-06-06 06:46:50] 2025-06-06 10:46:30,572 | INFO     | task id: 45006595
[2025-06-06 06:46:50] 2025-06-06 10:46:30,572 | INFO     | errors: (none)
[2025-06-06 06:46:50] 2025-06-06 10:46:30,572 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 06:46:50] 2025-06-06 10:46:30,572 | INFO     | pilot state: finished 
[2025-06-06 06:46:50] 2025-06-06 10:46:30,572 | INFO     | transexitcode: 0
[2025-06-06 06:46:50] 2025-06-06 10:46:30,572 | INFO     | exeerrorcode: 0
[2025-06-06 06:46:50] 2025-06-06 10:46:30,572 | INFO     | exeerrordiag: 
[2025-06-06 06:46:50] 2025-06-06 10:46:30,572 | INFO     | exitcode: 0
[2025-06-06 06:46:50] 2025-06-06 10:46:30,572 | INFO     | exitmsg: OK
[2025-06-06 06:46:50] 2025-06-06 10:46:30,572 | INFO     | cpuconsumptiontime: 33153 s
[2025-06-06 06:46:50] 2025-06-06 10:46:30,572 | INFO     | nevents: 400
[2025-06-06 06:46:50] 2025-06-06 10:46:30,573 | INFO     | neventsw: 0
[2025-06-06 06:46:50] 2025-06-06 10:46:30,573 | INFO     | pid: 2952482
[2025-06-06 06:46:50] 2025-06-06 10:46:30,573 | INFO     | pgrp: 2952482
[2025-06-06 06:46:50] 2025-06-06 10:46:30,573 | INFO     | corecount: 12
[2025-06-06 06:46:50] 2025-06-06 10:46:30,573 | INFO     | event service: False
[2025-06-06 06:46:50] 2025-06-06 10:46:30,573 | INFO     | sizes: {0: 2397118, 1: 2397317, 5: 2397523, 11: 2397579, 3069: 2422967, 3070: 2432092, 3075: 2432206}
[2025-06-06 06:46:50] 2025-06-06 10:46:30,573 | INFO     | --------------------------------------------------
[2025-06-06 06:46:50] 2025-06-06 10:46:30,573 | INFO     | 
[2025-06-06 06:46:50] 2025-06-06 10:46:30,574 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 06:46:50] 2025-06-06 10:46:30,593 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 06:46:50] 2025-06-06 10:46:30,594 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 06:46:50] 2025-06-06 10:46:30,594 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 06:46:50] 2025-06-06 10:46:30,594 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 06:46:50] 2025-06-06 10:46:30,594 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 06:46:50] 2025-06-06 10:46:30,594 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 06:46:50] 2025-06-06 10:46:30,594 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 06:46:50] 2025-06-06 10:46:30,594 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 06:46:50] 2025-06-06 10:46:30,594 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 06:46:50] 2025-06-06 10:46:30,594 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 06:46:50] 2025-06-06 10:46:30,594 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 06:46:50] 2025-06-06 10:46:30,594 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 06:46:50] 2025-06-06 10:46:30,594 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 06:46:50] 2025-06-06 10:46:30,595 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 06:46:50] 2025-06-06 10:46:30,595 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 06:46:50] 2025-06-06 10:46:30,595 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 06:46:50] 2025-06-06 10:46:30,595 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 06:46:50] 2025-06-06 10:46:30,595 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 06:46:50] 2025-06-06 10:46:30,595 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 06:46:50] 2025-06-06 10:46:30,595 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 06:46:50] 2025-06-06 10:46:30,595 | INFO     | job 6677469491 has completed (purged errors)
[2025-06-06 06:46:50] 2025-06-06 10:46:30,595 | INFO     | overall cleanup function is called
[2025-06-06 06:46:50] 2025-06-06 10:46:31,603 | INFO     | --- collectZombieJob: --- 10, [2952482]
[2025-06-06 06:46:50] 2025-06-06 10:46:31,604 | INFO     | zombie collector waiting for pid 2952482
[2025-06-06 06:46:50] 2025-06-06 10:46:31,604 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 06:46:50] 2025-06-06 10:46:31,604 | INFO     | collected zombie processes
[2025-06-06 06:46:50] 2025-06-06 10:46:31,604 | INFO     | will attempt to kill all subprocesses of pid=2952482
[2025-06-06 06:46:50] 2025-06-06 10:46:31,837 | INFO     | process IDs to be killed: [2952482] (in reverse order)
[2025-06-06 06:46:50] 2025-06-06 10:46:31,934 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 06:46:50] 2025-06-06 10:46:31,934 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 06:46:50] 2025-06-06 10:46:31,944 | INFO     | did not find any defunct processes belonging to 2952482
[2025-06-06 06:46:50] 2025-06-06 10:46:31,954 | INFO     | did not find any defunct processes belonging to 2952482
[2025-06-06 06:46:50] 2025-06-06 10:46:31,955 | INFO     | ready for new job
[2025-06-06 06:46:50] 2025-06-06 10:46:31,955 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 06:46:50] 2025-06-06 10:46:31,956 | INFO     | **************************************
[2025-06-06 06:46:50] 2025-06-06 10:46:31,956 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 06:46:50] 2025-06-06 10:46:31,956 | INFO     | **************************************
[2025-06-06 06:46:50] 2025-06-06 10:46:31,956 | INFO     | 
[2025-06-06 06:46:50] 2025-06-06 10:46:31,971 | INFO     | architecture information:
[2025-06-06 06:46:50] 2025-06-06 10:46:31,971 | INFO     | executing command: cat /etc/os-release
[2025-06-06 06:46:50] 2025-06-06 10:46:31,985 | INFO     | cat /etc/os-release:
[2025-06-06 06:46:50] NAME="CentOS Linux"
[2025-06-06 06:46:50] VERSION="7 (Core)"
[2025-06-06 06:46:50] ID="centos"
[2025-06-06 06:46:50] ID_LIKE="rhel fedora"
[2025-06-06 06:46:50] VERSION_ID="7"
[2025-06-06 06:46:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 06:46:50] ANSI_COLOR="0;31"
[2025-06-06 06:46:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 06:46:50] HOME_URL="https://www.centos.org/"
[2025-06-06 06:46:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 06:46:50] 
[2025-06-06 06:46:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 06:46:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 06:46:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 06:46:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 06:46:50] 
[2025-06-06 06:46:50] 2025-06-06 10:46:31,986 | INFO     | **************************************
[2025-06-06 06:46:50] 2025-06-06 10:46:32,488 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 06:46:50] 2025-06-06 10:46:32,504 | INFO     | sufficient remaining disk space (75898028032 B)
[2025-06-06 06:46:50] 2025-06-06 10:46:32,504 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 06:46:50] 2025-06-06 10:46:32,505 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 06:46:50] 2025-06-06 10:46:32,505 | INFO     | update_server=False
[2025-06-06 06:46:50] 2025-06-06 10:46:32,505 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 06:46:50] 2025-06-06 10:46:32,505 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 06:46:50] 2025-06-06 10:46:32,505 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 06:46:50] 2025-06-06 10:46:32,505 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 06:46:50] 2025-06-06 10:46:32,506 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 06:46:50] 2025-06-06 10:46:32,506 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 06:46:50] 2025-06-06 10:46:32,506 | INFO     | aborting loop
[2025-06-06 06:46:50] 2025-06-06 10:46:32,507 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 06:46:50] 2025-06-06 10:46:32,507 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 06:46:50] 2025-06-06 10:46:32,507 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 06:46:50] 2025-06-06 10:46:32,920 | INFO     | all job control threads have been joined
[2025-06-06 06:46:50] 2025-06-06 10:46:33,009 | INFO     | all data control threads have been joined
[2025-06-06 06:46:50] 2025-06-06 10:46:33,022 | INFO     | all payload control threads have been joined
[2025-06-06 06:46:50] 2025-06-06 10:46:33,509 | INFO     | [job] retrieve thread has finished
[2025-06-06 06:46:50] 2025-06-06 10:46:33,511 | INFO     | [job] job monitor thread has finished
[2025-06-06 06:46:50] 2025-06-06 10:46:33,512 | INFO     | [job] queue monitor thread has finished
[2025-06-06 06:46:50] 2025-06-06 10:46:33,585 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 06:46:50] 2025-06-06 10:46:33,754 | INFO     | [data] copytool_in thread has finished
[2025-06-06 06:46:50] 2025-06-06 10:46:33,892 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 06:46:50] 2025-06-06 10:46:33,926 | INFO     | [job] control thread has finished
[2025-06-06 06:46:50] 2025-06-06 10:46:33,983 | INFO     | [payload] failed_post thread has finished
[2025-06-06 06:46:50] 2025-06-06 10:46:34,014 | INFO     | [data] control thread has finished
[2025-06-06 06:46:50] 2025-06-06 10:46:34,027 | INFO     | [payload] control thread has finished
[2025-06-06 06:46:50] 2025-06-06 10:46:34,171 | INFO     | [payload] validate_post thread has finished
[2025-06-06 06:46:50] 2025-06-06 10:46:34,509 | INFO     | [data] copytool_out thread has finished
[2025-06-06 06:46:50] 2025-06-06 10:46:34,787 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 06:46:50] 2025-06-06 10:46:34,794 | INFO     | [job] validate thread has finished
[2025-06-06 06:46:50] 2025-06-06 10:46:36,512 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 06:46:50] 2025-06-06 10:46:42,890 | INFO     | job.realtimelogging is not enabled
[2025-06-06 06:46:50] 2025-06-06 10:46:43,895 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 06:46:50] 2025-06-06 10:46:44,876 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140023652906816)>', '<ExcThread(monitor, started 140023022208768)>']
[2025-06-06 06:46:50] 2025-06-06 10:46:45,569 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 06:46:50] 2025-06-06 10:46:45,569 | INFO     | [monitor] control thread has ended
[2025-06-06 06:46:50] 2025-06-06 10:46:49,897 | INFO     | all workflow threads have been joined
[2025-06-06 06:46:50] 2025-06-06 10:46:49,897 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 06:46:50] 2025-06-06 10:46:49,897 | INFO     | traces error code: 0
[2025-06-06 06:46:50] 2025-06-06 10:46:49,897 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 06:46:50] 2025-06-06 10:46:50,035 [wrapper] ==== pilot stdout END ====
[2025-06-06 06:46:50] 2025-06-06 10:46:50,038 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 06:46:50] 2025-06-06 10:46:50,040 [wrapper] pilotpid: 2944522
[2025-06-06 06:46:50] 2025-06-06 10:46:50,042 [wrapper] Pilot exit status: 0
[2025-06-06 06:46:50] 2025-06-06 10:46:50,052 [wrapper] pandaids: 6677469491
[2025-06-06 06:46:50] 2025-06-06 10:46:50,109 [wrapper] cleanup supervisor_pilot 3167124 2944523
[2025-06-06 06:46:50] 2025-06-06 10:46:50,112 [wrapper] Test setup, not cleaning
[2025-06-06 06:46:50] 2025-06-06 10:46:50,114 [wrapper] apfmon messages muted
[2025-06-06 06:46:50] 2025-06-06 10:46:50,116 [wrapper] ==== wrapper stdout END ====
[2025-06-06 06:46:50] 2025-06-06 10:46:50,119 [wrapper] ==== wrapper stderr END ====
[2025-06-06 06:46:50]  *** Error codes and diagnostics ***
[2025-06-06 06:46:50]     "exeErrorCode": 0,
[2025-06-06 06:46:50]     "exeErrorDiag": "",
[2025-06-06 06:46:50]     "pilotErrorCode": 0,
[2025-06-06 06:46:50]     "pilotErrorDiag": "",
[2025-06-06 06:46:50]  *** Listing of results directory ***
[2025-06-06 06:46:50] total 391776
[2025-06-06 06:46:50] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 00:53 pilot3.tar.gz
[2025-06-06 06:46:50] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 01:02 queuedata.json
[2025-06-06 06:46:50] -rwx------. 1 boincer umatlas     37140 Jun  3 01:03 runpilot2-wrapper.sh
[2025-06-06 06:46:50] -rw-r--r--. 1 boincer umatlas       100 Jun  6 05:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 06:46:50] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  6 05:54 run_atlas
[2025-06-06 06:46:50] -rw-r--r--. 1 boincer umatlas       105 Jun  6 05:54 job.xml
[2025-06-06 06:46:50] -rw-r--r--. 2 boincer umatlas 213769728 Jun  6 05:54 EVNT.45006593._000808.pool.root.1
[2025-06-06 06:46:50] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 05:54 start_atlas.sh
[2025-06-06 06:46:50] drwxrwx--x. 2 boincer umatlas      4096 Jun  6 05:54 shared
[2025-06-06 06:46:50] -rw-r--r--. 2 boincer umatlas    508883 Jun  6 05:54 input.tar.gz
[2025-06-06 06:46:50] -rw-r--r--. 1 boincer umatlas         0 Jun  6 05:54 boinc_lockfile
[2025-06-06 06:46:50] -rw-r--r--. 1 boincer umatlas      2523 Jun  6 05:54 pandaJob.out
[2025-06-06 06:46:50] -rw-------. 1 boincer umatlas    987967 Jun  6 05:54 agis_schedconf.cvmfs.json
[2025-06-06 06:46:50] -rw-------. 1 boincer umatlas   1598969 Jun  6 05:54 agis_ddmendpoints.agis.ALL.json
[2025-06-06 06:46:50] drwx------. 4 boincer umatlas      4096 Jun  6 05:55 pilot3
[2025-06-06 06:46:50] -rw-r--r--. 1 boincer umatlas      6841 Jun  6 06:40 init_data.xml
[2025-06-06 06:46:50] -rw-------. 1 boincer umatlas 182225594 Jun  6 06:45 HITS.45006595._020192.pool.root.1
[2025-06-06 06:46:50] -rw-r--r--. 1 boincer umatlas       529 Jun  6 06:45 boinc_task_state.xml
[2025-06-06 06:46:50] -rw-------. 1 boincer umatlas        95 Jun  6 06:46 pilot_heartbeat.json
[2025-06-06 06:46:50] -rw-------. 1 boincer umatlas      1036 Jun  6 06:46 memory_monitor_summary.json
[2025-06-06 06:46:50] -rw-------. 1 boincer umatlas    349777 Jun  6 06:46 log.45006595._020192.job.log.tgz.1
[2025-06-06 06:46:50] -rw-------. 1 boincer umatlas      7720 Jun  6 06:46 heartbeat.json
[2025-06-06 06:46:50] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 06:46 boinc_mmap_file
[2025-06-06 06:46:50] -rw-r--r--. 1 boincer umatlas        27 Jun  6 06:46 wrapper_checkpoint.txt
[2025-06-06 06:46:50] -rw-------. 1 boincer umatlas      4548 Jun  6 06:46 pilotlog.txt
[2025-06-06 06:46:50] -rw-------. 1 boincer umatlas    323481 Jun  6 06:46 log.45006595._020192.job.log.1
[2025-06-06 06:46:50] -rw-------. 1 boincer umatlas       357 Jun  6 06:46 output.list
[2025-06-06 06:46:50] -rw-r--r--. 1 boincer umatlas       620 Jun  6 06:46 runtime_log
[2025-06-06 06:46:50] -rw-------. 1 boincer umatlas    696320 Jun  6 06:46 result.tar.gz
[2025-06-06 06:46:50] -rw-r--r--. 1 boincer umatlas      8666 Jun  6 06:46 runtime_log.err
[2025-06-06 06:46:50] -rw-------. 1 boincer umatlas       655 Jun  6 06:46 MEkMDmFzYg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmx4hKDmEJTOJn.diag
[2025-06-06 06:46:50] -rw-r--r--. 1 boincer umatlas     21026 Jun  6 06:46 stderr.txt
[2025-06-06 06:46:50] HITS file was successfully produced:
[2025-06-06 06:46:50] -rw-------. 1 boincer umatlas 182225594 Jun  6 06:45 shared/HITS.pool.root.1
[2025-06-06 06:46:50]  *** Contents of shared directory: ***
[2025-06-06 06:46:50] total 387920
[2025-06-06 06:46:50] -rw-r--r--. 2 boincer umatlas 213769728 Jun  6 05:54 ATLAS.root_0
[2025-06-06 06:46:50] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 05:54 start_atlas.sh
[2025-06-06 06:46:50] -rw-r--r--. 2 boincer umatlas    508883 Jun  6 05:54 input.tar.gz
[2025-06-06 06:46:50] -rw-------. 1 boincer umatlas 182225594 Jun  6 06:45 HITS.pool.root.1
[2025-06-06 06:46:50] -rw-------. 1 boincer umatlas    696320 Jun  6 06:46 result.tar.gz
06:46:51 (2940769): run_atlas exited; CPU time 33211.756321
06:46:51 (2940769): called boinc_finish(0)

</stderr_txt>
]]>

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