Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:42:46 (27082): wrapper (7.7.26015): starting
11:42:46 (27082): wrapper: running run_atlas (--nthreads 8)
[2025-06-06 11:42:46] Arguments: --nthreads 8
[2025-06-06 11:42:46] Threads: 8
[2025-06-06 11:42:46] Checking for CVMFS
[2025-06-06 11:42:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 11:42:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 11:42:49] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 11:42:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 11:42:50] 2.11.2.0 20400 35923 96816 146847 1 208 22145570 25165825 3153 130560 0 18626016 99.829 22974332 2426 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-06 11:42:50] CVMFS is ok
[2025-06-06 11:42:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 11:42:50] Checking for apptainer binary...
[2025-06-06 11:42:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 11:42:50] Running /usr/bin/apptainer --version
[2025-06-06 11:42:50] apptainer version 1.3.2-1.el7
[2025-06-06 11:42:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 11:45:57] cg-vwn368.simple-grid.lan
[2025-06-06 11:45:57] apptainer works
[2025-06-06 11:45:57] Set ATHENA_PROC_NUMBER=8
[2025-06-06 11:45:57] Set ATHENA_CORE_NUMBER=8
[2025-06-06 11:45:58] Starting ATLAS job with PandaID=6678070881
[2025-06-06 11:45:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 15:37:29]  *** The last 200 lines of the pilot log: ***
[2025-06-06 15:37:29] 2025-06-06 13:30:00,041 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6678070881/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 15:37:29] 2025-06-06 13:30:00,042 | INFO     | extracted standard info from prmon json
[2025-06-06 15:37:29] 2025-06-06 13:30:00,042 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 15:37:29] 2025-06-06 13:30:00,042 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 15:37:29] 2025-06-06 13:30:00,043 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 15:37:29] 2025-06-06 13:30:00,043 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 15:37:29] 2025-06-06 13:30:00,048 | INFO     | fitting pss+swap vs Time
[2025-06-06 15:37:29] 2025-06-06 13:30:00,048 | INFO     | sum of square deviations: 2954447953.0
[2025-06-06 15:37:29] 2025-06-06 13:30:00,050 | INFO     | sum of deviations: 365376640.9999981
[2025-06-06 15:37:29] 2025-06-06 13:30:00,050 | INFO     | mean x: 1749210007.5
[2025-06-06 15:37:29] 2025-06-06 13:30:00,050 | INFO     | mean y: 2473472.9905660376
[2025-06-06 15:37:29] 2025-06-06 13:30:00,050 | INFO     | -- intersect: -213851365.73098156
[2025-06-06 15:37:29] 2025-06-06 13:30:00,051 | INFO     | intersect: -213851365.73098156
[2025-06-06 15:37:29] 2025-06-06 13:30:00,051 | INFO     | chi2: 2.6471396377104903
[2025-06-06 15:37:29] 2025-06-06 13:30:00,052 | INFO     | sum of square deviations: 2750295288.0
[2025-06-06 15:37:29] 2025-06-06 13:30:00,053 | INFO     | sum of deviations: 14976664368.000002
[2025-06-06 15:37:29] 2025-06-06 13:30:00,054 | INFO     | mean x: 1749209855.0
[2025-06-06 15:37:29] 2025-06-06 13:30:00,054 | INFO     | mean y: 2484175.531400966
[2025-06-06 15:37:29] 2025-06-06 13:30:00,054 | INFO     | -- intersect: -9522794445.217539
[2025-06-06 15:37:29] 2025-06-06 13:30:00,054 | INFO     | intersect: -9522794445.217539
[2025-06-06 15:37:29] 2025-06-06 13:30:00,054 | INFO     | chi2: 1.7801880085326227
[2025-06-06 15:37:29] 2025-06-06 13:30:00,054 | INFO     | current chi2=1.7801880085326227 (change=32.75050612470499 %)
[2025-06-06 15:37:29] 2025-06-06 13:30:00,055 | INFO     | sum of square deviations: 2555770710.5
[2025-06-06 15:37:29] 2025-06-06 13:30:00,056 | INFO     | sum of deviations: 14509216671.000006
[2025-06-06 15:37:29] 2025-06-06 13:30:00,056 | INFO     | mean x: 1749209702.5
[2025-06-06 15:37:29] 2025-06-06 13:30:00,057 | INFO     | mean y: 2483808.376237624
[2025-06-06 15:37:29] 2025-06-06 13:30:00,057 | INFO     | -- intersect: -9927852458.613375
[2025-06-06 15:37:29] 2025-06-06 13:30:00,057 | INFO     | intersect: -9927852458.613375
[2025-06-06 15:37:29] 2025-06-06 13:30:00,057 | INFO     | chi2: 1.7811759651056043
[2025-06-06 15:37:29] 2025-06-06 13:30:00,057 | INFO     | current chi2=1.7811759651056043 (change=-0.05549731647703425 %)
[2025-06-06 15:37:29] 2025-06-06 13:30:00,057 | INFO     | right removable region: 201
[2025-06-06 15:37:29] 2025-06-06 13:30:00,058 | INFO     | sum of square deviations: 2750295288.0
[2025-06-06 15:37:29] 2025-06-06 13:30:00,059 | INFO     | sum of deviations: -35438377732.0
[2025-06-06 15:37:29] 2025-06-06 13:30:00,060 | INFO     | mean x: 1749210160.0
[2025-06-06 15:37:29] 2025-06-06 13:30:00,060 | INFO     | mean y: 2499972.2512077293
[2025-06-06 15:37:29] 2025-06-06 13:30:00,060 | INFO     | -- intersect: 22541596284.273163
[2025-06-06 15:37:29] 2025-06-06 13:30:00,060 | INFO     | intersect: 22541596284.273163
[2025-06-06 15:37:29] 2025-06-06 13:30:00,060 | INFO     | chi2: 1.0539015625429742
[2025-06-06 15:37:29] 2025-06-06 13:30:00,061 | INFO     | current chi2=1.0539015625429742 (change=60.18715644881911 %)
[2025-06-06 15:37:29] 2025-06-06 13:30:00,061 | INFO     | sum of square deviations: 2555770710.5
[2025-06-06 15:37:29] 2025-06-06 13:30:00,062 | INFO     | sum of deviations: -32763457978.5
[2025-06-06 15:37:29] 2025-06-06 13:30:00,063 | INFO     | mean x: 1749210312.5
[2025-06-06 15:37:29] 2025-06-06 13:30:00,063 | INFO     | mean y: 2497832.3514851485
[2025-06-06 15:37:29] 2025-06-06 13:30:00,063 | INFO     | -- intersect: 22426331994.66595
[2025-06-06 15:37:29] 2025-06-06 13:30:00,063 | INFO     | intersect: 22426331994.66595
[2025-06-06 15:37:29] 2025-06-06 13:30:00,063 | INFO     | chi2: 1.0384695261580572
[2025-06-06 15:37:29] 2025-06-06 13:30:00,063 | INFO     | current chi2=1.0384695261580572 (change=1.4642768293919963 %)
[2025-06-06 15:37:29] 2025-06-06 13:30:00,063 | INFO     | left removable region: 20
[2025-06-06 15:37:29] 2025-06-06 13:30:00,064 | INFO     | sum of square deviations: 1838657730.0
[2025-06-06 15:37:29] 2025-06-06 13:30:00,065 | INFO     | sum of deviations: -4384183338.0
[2025-06-06 15:37:29] 2025-06-06 13:30:00,065 | INFO     | mean x: 1749210282.0
[2025-06-06 15:37:29] 2025-06-06 13:30:00,065 | INFO     | mean y: 2497370.364640884
[2025-06-06 15:37:29] 2025-06-06 13:30:00,066 | INFO     | -- intersect: 4173397939.7722383
[2025-06-06 15:37:29] 2025-06-06 13:30:00,066 | INFO     | intersect: 4173397939.7722383
[2025-06-06 15:37:29] 2025-06-06 13:30:00,066 | INFO     | chi2: 0.07816926721488664
[2025-06-06 15:37:29] 2025-06-06 13:30:00,066 | INFO     | -- intersect: 4173397939.7722383
[2025-06-06 15:37:29] 2025-06-06 13:30:00,066 | INFO     | current memory leak: -2.38 B/s (using 181 data points, chi2=0.08)
[2025-06-06 15:37:29] 2025-06-06 13:30:00,067 | INFO     | ..............................
[2025-06-06 15:37:29] 2025-06-06 13:30:00,067 | INFO     | . Timing measurements:
[2025-06-06 15:37:29] 2025-06-06 13:30:00,067 | INFO     | . get job = 0 s
[2025-06-06 15:37:29] 2025-06-06 13:30:00,067 | INFO     | . initial setup = 7 s
[2025-06-06 15:37:29] 2025-06-06 13:30:00,067 | INFO     | . payload setup = 21 s
[2025-06-06 15:37:29] 2025-06-06 13:30:00,068 | INFO     | . stage-in = 0 s
[2025-06-06 15:37:29] 2025-06-06 13:30:00,068 | INFO     | . payload execution = 12959 s
[2025-06-06 15:37:29] 2025-06-06 13:30:00,069 | INFO     | . stage-out = 4 s
[2025-06-06 15:37:29] 2025-06-06 13:30:00,069 | INFO     | . log creation = 1 s
[2025-06-06 15:37:29] 2025-06-06 13:30:00,069 | INFO     | ..............................
[2025-06-06 15:37:29] 2025-06-06 13:30:00,286 | INFO     | 
[2025-06-06 15:37:29] 2025-06-06 13:30:00,286 | INFO     | job summary report
[2025-06-06 15:37:29] 2025-06-06 13:30:00,286 | INFO     | --------------------------------------------------
[2025-06-06 15:37:29] 2025-06-06 13:30:00,286 | INFO     | PanDA job id: 6678070881
[2025-06-06 15:37:29] 2025-06-06 13:30:00,286 | INFO     | task id: 45006595
[2025-06-06 15:37:29] 2025-06-06 13:30:00,286 | INFO     | errors: (none)
[2025-06-06 15:37:29] 2025-06-06 13:30:00,286 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 15:37:29] 2025-06-06 13:30:00,287 | INFO     | pilot state: finished 
[2025-06-06 15:37:29] 2025-06-06 13:30:00,287 | INFO     | transexitcode: 0
[2025-06-06 15:37:29] 2025-06-06 13:30:00,287 | INFO     | exeerrorcode: 0
[2025-06-06 15:37:29] 2025-06-06 13:30:00,287 | INFO     | exeerrordiag: 
[2025-06-06 15:37:29] 2025-06-06 13:30:00,287 | INFO     | exitcode: 0
[2025-06-06 15:37:29] 2025-06-06 13:30:00,287 | INFO     | exitmsg: OK
[2025-06-06 15:37:29] 2025-06-06 13:30:00,287 | INFO     | cpuconsumptiontime: 48098 s
[2025-06-06 15:37:29] 2025-06-06 13:30:00,287 | INFO     | nevents: 400
[2025-06-06 15:37:29] 2025-06-06 13:30:00,287 | INFO     | neventsw: 0
[2025-06-06 15:37:29] 2025-06-06 13:30:00,287 | INFO     | pid: 7400
[2025-06-06 15:37:29] 2025-06-06 13:30:00,287 | INFO     | pgrp: 7400
[2025-06-06 15:37:29] 2025-06-06 13:30:00,287 | INFO     | corecount: 8
[2025-06-06 15:37:29] 2025-06-06 13:30:00,288 | INFO     | event service: False
[2025-06-06 15:37:29] 2025-06-06 13:30:00,288 | INFO     | sizes: {0: 2396514, 1: 2397370, 12: 2397370, 23: 2397398, 34: 2397426, 44: 2397454, 55: 2397610, 66: 2397638, 77: 2397666, 87: 2397722, 89: 2397956, 98: 2398292, 1
[2025-06-06 15:37:29] 2025-06-06 13:30:00,288 | INFO     | --------------------------------------------------
[2025-06-06 15:37:29] 2025-06-06 13:30:00,288 | INFO     | 
[2025-06-06 15:37:29] 2025-06-06 13:30:00,288 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-06-06 15:37:29] 2025-06-06 13:30:00,550 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 15:37:29] 2025-06-06 13:30:00,551 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 15:37:29] 2025-06-06 13:30:00,551 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 15:37:29] 2025-06-06 13:30:00,551 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 15:37:29] 2025-06-06 13:30:00,551 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 15:37:29] 2025-06-06 13:30:00,551 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 15:37:29] 2025-06-06 13:30:00,551 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 15:37:29] 2025-06-06 13:30:00,551 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 15:37:29] 2025-06-06 13:30:00,551 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 15:37:29] 2025-06-06 13:30:00,551 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 15:37:29] 2025-06-06 13:30:00,552 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 15:37:29] 2025-06-06 13:30:00,552 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 15:37:29] 2025-06-06 13:30:00,552 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 15:37:29] 2025-06-06 13:30:00,552 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 15:37:29] 2025-06-06 13:30:00,552 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 15:37:29] 2025-06-06 13:30:00,552 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 15:37:29] 2025-06-06 13:30:00,552 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 15:37:29] 2025-06-06 13:30:00,552 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 15:37:29] 2025-06-06 13:30:00,552 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 15:37:29] 2025-06-06 13:30:00,552 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 15:37:29] 2025-06-06 13:30:00,553 | INFO     | job 6678070881 has completed (purged errors)
[2025-06-06 15:37:29] 2025-06-06 13:30:00,553 | INFO     | overall cleanup function is called
[2025-06-06 15:37:29] 2025-06-06 13:30:01,563 | INFO     | --- collectZombieJob: --- 10, [7400]
[2025-06-06 15:37:29] 2025-06-06 13:30:01,563 | INFO     | zombie collector waiting for pid 7400
[2025-06-06 15:37:29] 2025-06-06 13:30:01,563 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 15:37:29] 2025-06-06 13:30:01,563 | INFO     | collected zombie processes
[2025-06-06 15:37:29] 2025-06-06 13:30:01,563 | INFO     | will attempt to kill all subprocesses of pid=7400
[2025-06-06 15:37:29] 2025-06-06 13:30:01,665 | INFO     | process IDs to be killed: [7400] (in reverse order)
[2025-06-06 15:37:29] 2025-06-06 13:30:02,517 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 15:37:29] 2025-06-06 13:30:02,518 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 15:37:29] 2025-06-06 13:30:02,521 | INFO     | did not find any defunct processes belonging to 7400
[2025-06-06 15:37:29] 2025-06-06 13:30:02,524 | INFO     | did not find any defunct processes belonging to 7400
[2025-06-06 15:37:29] 2025-06-06 13:30:02,524 | INFO     | ready for new job
[2025-06-06 15:37:29] 2025-06-06 13:30:02,524 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 15:37:29] 2025-06-06 13:30:02,534 | INFO     | **************************************
[2025-06-06 15:37:29] 2025-06-06 13:30:02,534 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 15:37:29] 2025-06-06 13:30:02,534 | INFO     | **************************************
[2025-06-06 15:37:29] 2025-06-06 13:30:02,534 | INFO     | 
[2025-06-06 15:37:29] 2025-06-06 13:30:02,535 | INFO     | pilot is running in a VM
[2025-06-06 15:37:29] 2025-06-06 13:30:02,535 | INFO     | architecture information:
[2025-06-06 15:37:29] 2025-06-06 13:30:02,535 | INFO     | executing command: cat /etc/os-release
[2025-06-06 15:37:29] 2025-06-06 13:30:02,810 | INFO     | cat /etc/os-release:
[2025-06-06 15:37:29] NAME="CentOS Linux"
[2025-06-06 15:37:29] VERSION="7 (Core)"
[2025-06-06 15:37:29] ID="centos"
[2025-06-06 15:37:29] ID_LIKE="rhel fedora"
[2025-06-06 15:37:29] VERSION_ID="7"
[2025-06-06 15:37:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 15:37:29] ANSI_COLOR="0;31"
[2025-06-06 15:37:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 15:37:29] HOME_URL="https://www.centos.org/"
[2025-06-06 15:37:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 15:37:29] 
[2025-06-06 15:37:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 15:37:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 15:37:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 15:37:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 15:37:29] 
[2025-06-06 15:37:29] 2025-06-06 13:30:02,811 | INFO     | **************************************
[2025-06-06 15:37:29] 2025-06-06 13:30:03,314 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-06-06 15:37:29] 2025-06-06 13:30:03,535 | INFO     | sufficient remaining disk space (470873538560 B)
[2025-06-06 15:37:29] 2025-06-06 13:30:03,535 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 15:37:29] 2025-06-06 13:30:03,535 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 15:37:29] 2025-06-06 13:30:03,535 | INFO     | update_server=False
[2025-06-06 15:37:29] 2025-06-06 13:30:03,535 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 15:37:29] 2025-06-06 13:30:03,537 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 15:37:29] 2025-06-06 13:30:03,541 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 15:37:29] 2025-06-06 13:30:03,541 | INFO     | aborting loop
[2025-06-06 15:37:29] 2025-06-06 13:30:03,582 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 15:37:29] 2025-06-06 13:30:03,600 | INFO     | all data control threads have been joined
[2025-06-06 15:37:29] 2025-06-06 13:30:03,852 | INFO     | all job control threads have been joined
[2025-06-06 15:37:29] 2025-06-06 13:30:03,974 | INFO     | all payload control threads have been joined
[2025-06-06 15:37:29] 2025-06-06 13:30:04,198 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 15:37:29] 2025-06-06 13:30:04,198 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 15:37:29] 2025-06-06 13:30:04,198 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 15:37:29] 2025-06-06 13:30:04,542 | INFO     | [job] retrieve thread has finished
[2025-06-06 15:37:29] 2025-06-06 13:30:04,547 | INFO     | [job] job monitor thread has finished
[2025-06-06 15:37:29] 2025-06-06 13:30:04,606 | INFO     | [data] control thread has finished
[2025-06-06 15:37:29] 2025-06-06 13:30:04,703 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 15:37:29] 2025-06-06 13:30:04,721 | INFO     | [job] validate thread has finished
[2025-06-06 15:37:29] 2025-06-06 13:30:04,726 | INFO     | [payload] failed_post thread has finished
[2025-06-06 15:37:29] 2025-06-06 13:30:04,858 | INFO     | [job] control thread has finished
[2025-06-06 15:37:29] 2025-06-06 13:30:04,980 | INFO     | [payload] control thread has finished
[2025-06-06 15:37:29] 2025-06-06 13:30:04,994 | INFO     | [payload] validate_post thread has finished
[2025-06-06 15:37:29] 2025-06-06 13:30:05,218 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 15:37:29] 2025-06-06 13:30:05,290 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 15:37:29] 2025-06-06 13:30:05,493 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 15:37:29] 2025-06-06 13:30:05,588 | INFO     | [data] copytool_out thread has finished
[2025-06-06 15:37:29] 2025-06-06 13:30:05,601 | INFO     | [data] copytool_in thread has finished
[2025-06-06 15:37:29] 2025-06-06 13:30:05,643 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 15:37:29] 2025-06-06 13:30:06,224 | INFO     | [job] queue monitor thread has finished
[2025-06-06 15:37:29] 2025-06-06 13:30:07,546 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 15:37:29] 2025-06-06 13:30:08,757 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140082464732992)>', '<ExcThread(monitor, started 140081868289792)>']
[2025-06-06 15:37:29] 2025-06-06 13:30:09,229 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 15:37:29] 2025-06-06 13:30:09,229 | INFO     | [monitor] control thread has ended
[2025-06-06 15:37:29] 2025-06-06 13:30:13,784 | INFO     | all workflow threads have been joined
[2025-06-06 15:37:29] 2025-06-06 13:30:13,784 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 15:37:29] 2025-06-06 13:30:13,784 | INFO     | traces error code: 0
[2025-06-06 15:37:29] 2025-06-06 13:30:13,785 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 15:37:29] 2025-06-06 13:30:14,172 [wrapper] ==== pilot stdout END ====
[2025-06-06 15:37:29] 2025-06-06 13:30:14,222 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 15:37:29] 2025-06-06 13:30:14,273 [wrapper] pilotpid: 730
[2025-06-06 15:37:29] 2025-06-06 13:30:14,349 [wrapper] Pilot exit status: 0
[2025-06-06 15:37:29] 2025-06-06 13:30:14,771 [wrapper] pandaids: 6678070881
[2025-06-06 15:37:29] 2025-06-06 13:30:15,348 [wrapper] cleanup supervisor_pilot 10613 731
[2025-06-06 15:37:29] 2025-06-06 13:30:15,416 [wrapper] Test setup, not cleaning
[2025-06-06 15:37:29] 2025-06-06 13:30:15,492 [wrapper] apfmon messages muted
[2025-06-06 15:37:29] 2025-06-06 13:30:15,600 [wrapper] ==== wrapper stdout END ====
[2025-06-06 15:37:29] 2025-06-06 13:30:15,692 [wrapper] ==== wrapper stderr END ====
[2025-06-06 15:37:29]  *** Error codes and diagnostics ***
[2025-06-06 15:37:29]     "exeErrorCode": 0,
[2025-06-06 15:37:29]     "exeErrorDiag": "",
[2025-06-06 15:37:29]     "pilotErrorCode": 0,
[2025-06-06 15:37:29]     "pilotErrorDiag": "",
[2025-06-06 15:37:29]  *** Listing of results directory ***
[2025-06-06 15:37:29] total 386748
[2025-06-06 15:37:29] -rw-r--r--. 1 boinc boinc    495897 Jun  3 22:09 pilot3.tar.gz
[2025-06-06 15:37:29] -rw-r--r--. 1 boinc boinc      5111 Jun  3 22:16 queuedata.json
[2025-06-06 15:37:29] -rwx------. 1 boinc boinc     37140 Jun  3 22:17 runpilot2-wrapper.sh
[2025-06-06 15:37:29] -rw-r--r--. 1 boinc boinc       100 Jun  6 11:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 15:37:29] -rwxr-xr-x. 1 boinc boinc      7986 Jun  6 11:42 run_atlas
[2025-06-06 15:37:29] -rw-r--r--. 1 boinc boinc       105 Jun  6 11:42 job.xml
[2025-06-06 15:37:29] -rw-r--r--. 2 boinc boinc 212968513 Jun  6 11:42 EVNT.45006593._001794.pool.root.1
[2025-06-06 15:37:29] -rw-r--r--. 2 boinc boinc     15093 Jun  6 11:42 start_atlas.sh
[2025-06-06 15:37:29] drwxrwx--x. 2 boinc boinc        68 Jun  6 11:42 shared
[2025-06-06 15:37:29] -rw-r--r--. 2 boinc boinc    508885 Jun  6 11:42 input.tar.gz
[2025-06-06 15:37:29] -rw-r--r--. 1 boinc boinc      6391 Jun  6 11:42 init_data.xml
[2025-06-06 15:37:29] -rw-r--r--. 1 boinc boinc         0 Jun  6 11:42 boinc_lockfile
[2025-06-06 15:37:29] -rw-r--r--. 1 boinc boinc      2525 Jun  6 11:45 pandaJob.out
[2025-06-06 15:37:29] -rw-------. 1 boinc boinc    987967 Jun  6 11:49 agis_schedconf.cvmfs.json
[2025-06-06 15:37:29] drwx------. 4 boinc boinc      4096 Jun  6 11:49 pilot3
[2025-06-06 15:37:29] -rw-------. 1 boinc boinc 176165212 Jun  6 15:27 HITS.45006595._044756.pool.root.1
[2025-06-06 15:37:29] -rw-r--r--. 1 boinc boinc       531 Jun  6 15:27 boinc_task_state.xml
[2025-06-06 15:37:29] -rw-------. 1 boinc boinc      1016 Jun  6 15:28 memory_monitor_summary.json
[2025-06-06 15:37:29] -rw-------. 1 boinc boinc   1598969 Jun  6 15:28 agis_ddmendpoints.agis.ALL.json
[2025-06-06 15:37:29] -rw-------. 1 boinc boinc    389848 Jun  6 15:28 log.45006595._044756.job.log.tgz.1
[2025-06-06 15:37:29] -rw-------. 1 boinc boinc        95 Jun  6 15:29 pilot_heartbeat.json
[2025-06-06 15:37:29] -rw-------. 1 boinc boinc      7688 Jun  6 15:30 heartbeat.json
[2025-06-06 15:37:29] -rw-------. 1 boinc boinc      4416 Jun  6 15:30 pilotlog.txt
[2025-06-06 15:37:29] -rw-------. 1 boinc boinc   1143111 Jun  6 15:30 log.45006595._044756.job.log.1
[2025-06-06 15:37:29] -rw-------. 1 boinc boinc       357 Jun  6 15:30 output.list
[2025-06-06 15:37:29] -rw-r--r--. 1 boinc boinc       620 Jun  6 15:30 runtime_log
[2025-06-06 15:37:29] -rw-------. 1 boinc boinc   1556480 Jun  6 15:30 result.tar.gz
[2025-06-06 15:37:29] -rw-------. 1 boinc boinc       657 Jun  6 15:30 ynXMDmNFng7n9Rq4apOajLDm4fhM0noT9bVof3QYDmyrZKDmeYL7To.diag
[2025-06-06 15:37:29] -rw-r--r--. 1 boinc boinc      8659 Jun  6 15:30 runtime_log.err
[2025-06-06 15:37:29] -rw-r--r--. 1 boinc boinc      8192 Jun  6 15:37 boinc_mmap_file
[2025-06-06 15:37:29] -rw-r--r--. 1 boinc boinc        28 Jun  6 15:37 wrapper_checkpoint.txt
[2025-06-06 15:37:29] -rw-r--r--. 1 boinc boinc     20521 Jun  6 15:37 stderr.txt
[2025-06-06 15:37:29] HITS file was successfully produced:
[2025-06-06 15:37:29] -rw-------. 1 boinc boinc 176165212 Jun  6 15:27 shared/HITS.pool.root.1
[2025-06-06 15:37:29]  *** Contents of shared directory: ***
[2025-06-06 15:37:29] total 382056
[2025-06-06 15:37:29] -rw-r--r--. 2 boinc boinc 212968513 Jun  6 11:42 ATLAS.root_0
[2025-06-06 15:37:29] -rw-r--r--. 2 boinc boinc     15093 Jun  6 11:42 start_atlas.sh
[2025-06-06 15:37:29] -rw-r--r--. 2 boinc boinc    508885 Jun  6 11:42 input.tar.gz
[2025-06-06 15:37:29] -rw-------. 1 boinc boinc 176165212 Jun  6 15:27 HITS.pool.root.1
[2025-06-06 15:37:29] -rw-------. 1 boinc boinc   1556480 Jun  6 15:30 result.tar.gz
15:37:31 (27082): run_atlas exited; CPU time 48269.002327
15:37:31 (27082): called boinc_finish(0)

</stderr_txt>
]]>

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