Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:28:53 (718431): wrapper (7.7.26015): starting
05:28:53 (718431): wrapper: running run_atlas (--nthreads 8)
[2025-06-06 05:28:53] Arguments: --nthreads 8
[2025-06-06 05:28:53] Threads: 8
[2025-06-06 05:28:53] Checking for CVMFS
[2025-06-06 05:28:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 05:28:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 05:28:53] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 05:28:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 05:28:53] 2.12.6.0 274037 174623 1084784 146847 1 760 30925682 40960001 28489 130560 2 776664649 99.755 500984203 19223 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-06 05:28:53] CVMFS is ok
[2025-06-06 05:28:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 05:28:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 05:28:53] Further information can be found at the LHC@home message board.
[2025-06-06 05:28:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 05:28:53] Checking for apptainer binary...
[2025-06-06 05:28:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 05:28:53] Running /usr/bin/apptainer --version
[2025-06-06 05:28:53] apptainer version 1.4.1-1.el9
[2025-06-06 05:28:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 05:28:53] lc-12-9.aglt2.org
[2025-06-06 05:28:53] apptainer works
[2025-06-06 05:28:53] Set ATHENA_PROC_NUMBER=8
[2025-06-06 05:28:53] Set ATHENA_CORE_NUMBER=8
[2025-06-06 05:28:53] Starting ATLAS job with PandaID=6679455510
[2025-06-06 05:28:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 06:57:20]  *** The last 200 lines of the pilot log: ***
[2025-06-06 06:57:20]  guid=d2443d83-6072-4fce-9ceb-63b2fbdd2c9c
[2025-06-06 06:57:20]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-06 06:57:20]  is_altstaged=None
[2025-06-06 06:57:20]  is_tar=False
[2025-06-06 06:57:20]  lfn=log.45006595._056327.job.log.tgz.1
[2025-06-06 06:57:20]  mtime=0
[2025-06-06 06:57:20]  protocol_id=None
[2025-06-06 06:57:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 06:57:20]  replicas=None
[2025-06-06 06:57:20]  scope=mc23_13p6TeV
[2025-06-06 06:57:20]  status=None
[2025-06-06 06:57:20]  status_code=0
[2025-06-06 06:57:20]  storage_token=
[2025-06-06 06:57:20]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6679455510/log.45006595._056327.job.log.tgz.1
[2025-06-06 06:57:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2d/25/log.45006595._056327.job.log.tgz.1
[2025-06-06 06:57:20]  workdir=None
[2025-06-06 06:57:20] ]
[2025-06-06 06:57:20] 2025-06-06 10:56:55,175 | INFO     | transferring file log.45006595._056327.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6679455510/log.45006595._056327.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-06 06:57:20] 2025-06-06 10:56:55,175 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6679455510/log.45006595._056327.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._056327.job
[2025-06-06 06:57:20] 2025-06-06 10:56:55,195 | INFO     | adding to output.list: log.45006595._056327.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2d/25/log.45006595._056327.job.log.tg
[2025-06-06 06:57:20] 2025-06-06 10:56:55,196 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 06:57:20] 2025-06-06 10:56:55,196 | INFO     | summary of transferred files:
[2025-06-06 06:57:20] 2025-06-06 10:56:55,196 | INFO     |  -- lfn=log.45006595._056327.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 06:57:20] 2025-06-06 10:56:55,197 | INFO     | stage-out finished correctly
[2025-06-06 06:57:20] 2025-06-06 10:56:56,630 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 06:57:20] 2025-06-06 10:56:56,721 | INFO     | job 6679455510 has state=finished
[2025-06-06 06:57:20] 2025-06-06 10:56:56,722 | INFO     | preparing for final server update for job 6679455510 in state='finished'
[2025-06-06 06:57:20] 2025-06-06 10:56:56,722 | INFO     | this job has now completed (state=finished)
[2025-06-06 06:57:20] 2025-06-06 10:56:56,722 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 06:57:20] 2025-06-06 10:56:56,722 | INFO     | log transfer has been attempted: DONE
[2025-06-06 06:57:20] 2025-06-06 10:56:56,722 | INFO     | job 6679455510 has finished - writing final server update
[2025-06-06 06:57:20] 2025-06-06 10:56:56,723 | INFO     | total number of processed events: 400 (read)
[2025-06-06 06:57:20] 2025-06-06 10:56:56,740 | INFO     | executing command: lscpu
[2025-06-06 06:57:20] 2025-06-06 10:56:56,815 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 06:57:20] 2025-06-06 10:56:57,791 | INFO     | 5274s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-06 06:57:20] 2025-06-06 10:56:59,699 | WARNING  | process 731464 can no longer be monitored (due to stat problems) - aborting
[2025-06-06 06:57:20] 2025-06-06 10:56:59,700 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679455510/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 06:57:20] 2025-06-06 10:57:00,065 | INFO     | number of running child processes to parent process 731464: 1
[2025-06-06 06:57:20] 2025-06-06 10:57:00,065 | INFO     | maximum number of monitored processes: 6
[2025-06-06 06:57:20] 2025-06-06 10:57:00,486 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-06 06:57:20] 2025-06-06 10:57:00,486 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679455510/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 06:57:20] 2025-06-06 10:57:00,487 | INFO     | extracted standard info from prmon json
[2025-06-06 06:57:20] 2025-06-06 10:57:00,487 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 06:57:20] 2025-06-06 10:57:00,487 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 06:57:20] 2025-06-06 10:57:00,487 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 06:57:20] 2025-06-06 10:57:00,487 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 06:57:20] 2025-06-06 10:57:00,489 | INFO     | fitting pss+swap vs Time
[2025-06-06 06:57:20] 2025-06-06 10:57:00,489 | INFO     | sum of square deviations: 152858680.0
[2025-06-06 06:57:20] 2025-06-06 10:57:00,490 | INFO     | sum of deviations: -16136233254.00001
[2025-06-06 06:57:20] 2025-06-06 10:57:00,490 | INFO     | mean x: 1749204860.0
[2025-06-06 06:57:20] 2025-06-06 10:57:00,490 | INFO     | mean y: 2440663.506329114
[2025-06-06 06:57:20] 2025-06-06 10:57:00,490 | INFO     | -- intersect: 184653895392.74008
[2025-06-06 06:57:20] 2025-06-06 10:57:00,490 | INFO     | intersect: 184653895392.74008
[2025-06-06 06:57:20] 2025-06-06 10:57:00,490 | INFO     | chi2: 0.22675531224284864
[2025-06-06 06:57:20] 2025-06-06 10:57:00,490 | INFO     | -- intersect: 184653895392.74008
[2025-06-06 06:57:20] 2025-06-06 10:57:00,490 | INFO     | current memory leak: -105.56 B/s (using 79 data points, chi2=0.23)
[2025-06-06 06:57:20] 2025-06-06 10:57:00,491 | INFO     | ..............................
[2025-06-06 06:57:20] 2025-06-06 10:57:00,491 | INFO     | . Timing measurements:
[2025-06-06 06:57:20] 2025-06-06 10:57:00,491 | INFO     | . get job = 0 s
[2025-06-06 06:57:20] 2025-06-06 10:57:00,491 | INFO     | . initial setup = 3 s
[2025-06-06 06:57:20] 2025-06-06 10:57:00,491 | INFO     | . payload setup = 9 s
[2025-06-06 06:57:20] 2025-06-06 10:57:00,491 | INFO     | . stage-in = 0 s
[2025-06-06 06:57:20] 2025-06-06 10:57:00,491 | INFO     | . payload execution = 5238 s
[2025-06-06 06:57:20] 2025-06-06 10:57:00,491 | INFO     | . stage-out = 0 s
[2025-06-06 06:57:20] 2025-06-06 10:57:00,491 | INFO     | . log creation = 0 s
[2025-06-06 06:57:20] 2025-06-06 10:57:00,491 | INFO     | ..............................
[2025-06-06 06:57:20] 2025-06-06 10:57:00,979 | INFO     | 
[2025-06-06 06:57:20] 2025-06-06 10:57:00,979 | INFO     | job summary report
[2025-06-06 06:57:20] 2025-06-06 10:57:00,979 | INFO     | --------------------------------------------------
[2025-06-06 06:57:20] 2025-06-06 10:57:00,980 | INFO     | PanDA job id: 6679455510
[2025-06-06 06:57:20] 2025-06-06 10:57:00,980 | INFO     | task id: 45006595
[2025-06-06 06:57:20] 2025-06-06 10:57:00,980 | INFO     | errors: (none)
[2025-06-06 06:57:20] 2025-06-06 10:57:00,980 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 06:57:20] 2025-06-06 10:57:00,980 | INFO     | pilot state: finished 
[2025-06-06 06:57:20] 2025-06-06 10:57:00,980 | INFO     | transexitcode: 0
[2025-06-06 06:57:20] 2025-06-06 10:57:00,980 | INFO     | exeerrorcode: 0
[2025-06-06 06:57:20] 2025-06-06 10:57:00,980 | INFO     | exeerrordiag: 
[2025-06-06 06:57:20] 2025-06-06 10:57:00,980 | INFO     | exitcode: 0
[2025-06-06 06:57:20] 2025-06-06 10:57:00,980 | INFO     | exitmsg: OK
[2025-06-06 06:57:20] 2025-06-06 10:57:00,981 | INFO     | cpuconsumptiontime: 36462 s
[2025-06-06 06:57:20] 2025-06-06 10:57:00,981 | INFO     | nevents: 400
[2025-06-06 06:57:20] 2025-06-06 10:57:00,981 | INFO     | neventsw: 0
[2025-06-06 06:57:20] 2025-06-06 10:57:00,981 | INFO     | pid: 731464
[2025-06-06 06:57:20] 2025-06-06 10:57:00,981 | INFO     | pgrp: 731464
[2025-06-06 06:57:20] 2025-06-06 10:57:00,981 | INFO     | corecount: 8
[2025-06-06 06:57:20] 2025-06-06 10:57:00,981 | INFO     | event service: False
[2025-06-06 06:57:20] 2025-06-06 10:57:00,981 | INFO     | sizes: {0: 2397292, 5: 2397498, 11: 2397554, 5252: 2423899, 5253: 2432840, 5255: 2432896, 5259: 2433194}
[2025-06-06 06:57:20] 2025-06-06 10:57:00,981 | INFO     | --------------------------------------------------
[2025-06-06 06:57:20] 2025-06-06 10:57:00,981 | INFO     | 
[2025-06-06 06:57:20] 2025-06-06 10:57:00,981 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 06:57:20] 2025-06-06 10:57:01,002 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 06:57:20] 2025-06-06 10:57:01,002 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 06:57:20] 2025-06-06 10:57:01,002 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 06:57:20] 2025-06-06 10:57:01,002 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 06:57:20] 2025-06-06 10:57:01,003 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 06:57:20] 2025-06-06 10:57:01,003 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 06:57:20] 2025-06-06 10:57:01,003 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 06:57:20] 2025-06-06 10:57:01,003 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 06:57:20] 2025-06-06 10:57:01,003 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 06:57:20] 2025-06-06 10:57:01,003 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 06:57:20] 2025-06-06 10:57:01,003 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 06:57:20] 2025-06-06 10:57:01,003 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 06:57:20] 2025-06-06 10:57:01,003 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 06:57:20] 2025-06-06 10:57:01,003 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 06:57:20] 2025-06-06 10:57:01,003 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 06:57:20] 2025-06-06 10:57:01,003 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 06:57:20] 2025-06-06 10:57:01,003 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 06:57:20] 2025-06-06 10:57:01,003 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 06:57:20] 2025-06-06 10:57:01,004 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 06:57:20] 2025-06-06 10:57:01,004 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 06:57:20] 2025-06-06 10:57:01,004 | INFO     | job 6679455510 has completed (purged errors)
[2025-06-06 06:57:20] 2025-06-06 10:57:01,004 | INFO     | overall cleanup function is called
[2025-06-06 06:57:20] 2025-06-06 10:57:02,011 | INFO     | --- collectZombieJob: --- 10, [731464]
[2025-06-06 06:57:20] 2025-06-06 10:57:02,011 | INFO     | zombie collector waiting for pid 731464
[2025-06-06 06:57:20] 2025-06-06 10:57:02,012 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 06:57:20] 2025-06-06 10:57:02,012 | INFO     | collected zombie processes
[2025-06-06 06:57:20] 2025-06-06 10:57:02,012 | INFO     | will attempt to kill all subprocesses of pid=731464
[2025-06-06 06:57:20] 2025-06-06 10:57:02,437 | INFO     | process IDs to be killed: [731464] (in reverse order)
[2025-06-06 06:57:20] 2025-06-06 10:57:02,572 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 06:57:20] 2025-06-06 10:57:02,572 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 06:57:20] 2025-06-06 10:57:02,591 | INFO     | did not find any defunct processes belonging to 731464
[2025-06-06 06:57:20] 2025-06-06 10:57:02,609 | INFO     | did not find any defunct processes belonging to 731464
[2025-06-06 06:57:20] 2025-06-06 10:57:02,609 | INFO     | ready for new job
[2025-06-06 06:57:20] 2025-06-06 10:57:02,609 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 06:57:20] 2025-06-06 10:57:02,610 | INFO     | **************************************
[2025-06-06 06:57:20] 2025-06-06 10:57:02,610 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 06:57:20] 2025-06-06 10:57:02,610 | INFO     | **************************************
[2025-06-06 06:57:20] 2025-06-06 10:57:02,611 | INFO     | 
[2025-06-06 06:57:20] 2025-06-06 10:57:02,627 | INFO     | architecture information:
[2025-06-06 06:57:20] 2025-06-06 10:57:02,628 | INFO     | executing command: cat /etc/os-release
[2025-06-06 06:57:20] 2025-06-06 10:57:02,644 | INFO     | cat /etc/os-release:
[2025-06-06 06:57:20] NAME="CentOS Linux"
[2025-06-06 06:57:20] VERSION="7 (Core)"
[2025-06-06 06:57:20] ID="centos"
[2025-06-06 06:57:20] ID_LIKE="rhel fedora"
[2025-06-06 06:57:20] VERSION_ID="7"
[2025-06-06 06:57:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 06:57:20] ANSI_COLOR="0;31"
[2025-06-06 06:57:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 06:57:20] HOME_URL="https://www.centos.org/"
[2025-06-06 06:57:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 06:57:20] 
[2025-06-06 06:57:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 06:57:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 06:57:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 06:57:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 06:57:20] 
[2025-06-06 06:57:20] 2025-06-06 10:57:02,644 | INFO     | **************************************
[2025-06-06 06:57:20] 2025-06-06 10:57:03,147 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 06:57:20] 2025-06-06 10:57:03,163 | INFO     | sufficient remaining disk space (420200054784 B)
[2025-06-06 06:57:20] 2025-06-06 10:57:03,163 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 06:57:20] 2025-06-06 10:57:03,163 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 06:57:20] 2025-06-06 10:57:03,164 | INFO     | update_server=False
[2025-06-06 06:57:20] 2025-06-06 10:57:03,164 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 06:57:20] 2025-06-06 10:57:03,164 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 06:57:20] 2025-06-06 10:57:03,164 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 06:57:20] 2025-06-06 10:57:03,164 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 06:57:20] 2025-06-06 10:57:03,165 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 06:57:20] 2025-06-06 10:57:03,165 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 06:57:20] 2025-06-06 10:57:03,304 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 06:57:20] 2025-06-06 10:57:03,390 | INFO     | all payload control threads have been joined
[2025-06-06 06:57:20] 2025-06-06 10:57:03,573 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 06:57:20] 2025-06-06 10:57:03,573 | INFO     | aborting loop
[2025-06-06 06:57:20] 2025-06-06 10:57:03,591 | INFO     | all job control threads have been joined
[2025-06-06 06:57:20] 2025-06-06 10:57:03,791 | INFO     | all data control threads have been joined
[2025-06-06 06:57:20] 2025-06-06 10:57:04,168 | INFO     | [job] retrieve thread has finished
[2025-06-06 06:57:20] 2025-06-06 10:57:04,303 | INFO     | [payload] validate_post thread has finished
[2025-06-06 06:57:20] 2025-06-06 10:57:04,393 | INFO     | [payload] control thread has finished
[2025-06-06 06:57:20] 2025-06-06 10:57:04,557 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 06:57:20] 2025-06-06 10:57:04,579 | INFO     | [job] job monitor thread has finished
[2025-06-06 06:57:20] 2025-06-06 10:57:04,596 | INFO     | [job] control thread has finished
[2025-06-06 06:57:20] 2025-06-06 10:57:04,669 | INFO     | [data] copytool_in thread has finished
[2025-06-06 06:57:20] 2025-06-06 10:57:04,670 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 06:57:20] 2025-06-06 10:57:04,796 | INFO     | [data] control thread has finished
[2025-06-06 06:57:20] 2025-06-06 10:57:04,929 | INFO     | [payload] failed_post thread has finished
[2025-06-06 06:57:20] 2025-06-06 10:57:05,172 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 06:57:20] 2025-06-06 10:57:05,203 | INFO     | [job] validate thread has finished
[2025-06-06 06:57:20] 2025-06-06 10:57:05,309 | INFO     | [data] copytool_out thread has finished
[2025-06-06 06:57:20] 2025-06-06 10:57:05,596 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 06:57:20] 2025-06-06 10:57:06,601 | INFO     | [job] queue monitor thread has finished
[2025-06-06 06:57:20] 2025-06-06 10:57:07,170 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 06:57:20] 2025-06-06 10:57:13,604 | INFO     | job.realtimelogging is not enabled
[2025-06-06 06:57:20] 2025-06-06 10:57:14,610 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 06:57:20] 2025-06-06 10:57:15,013 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140289629013824)>', '<ExcThread(monitor, started 140288865597184)>']
[2025-06-06 06:57:20] 2025-06-06 10:57:15,224 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 06:57:20] 2025-06-06 10:57:15,224 | INFO     | [monitor] control thread has ended
[2025-06-06 06:57:20] 2025-06-06 10:57:20,038 | INFO     | all workflow threads have been joined
[2025-06-06 06:57:20] 2025-06-06 10:57:20,039 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 06:57:20] 2025-06-06 10:57:20,039 | INFO     | traces error code: 0
[2025-06-06 06:57:20] 2025-06-06 10:57:20,039 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 06:57:20] 2025-06-06 10:57:20,195 [wrapper] ==== pilot stdout END ====
[2025-06-06 06:57:20] 2025-06-06 10:57:20,198 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 06:57:20] 2025-06-06 10:57:20,199 [wrapper] pilotpid: 722332
[2025-06-06 06:57:20] 2025-06-06 10:57:20,201 [wrapper] Pilot exit status: 0
[2025-06-06 06:57:20] 2025-06-06 10:57:20,209 [wrapper] pandaids: 6679455510
[2025-06-06 06:57:20] 2025-06-06 10:57:20,295 [wrapper] cleanup supervisor_pilot 1181474 722333
[2025-06-06 06:57:20] 2025-06-06 10:57:20,297 [wrapper] Test setup, not cleaning
[2025-06-06 06:57:20] 2025-06-06 10:57:20,300 [wrapper] apfmon messages muted
[2025-06-06 06:57:20] 2025-06-06 10:57:20,302 [wrapper] ==== wrapper stdout END ====
[2025-06-06 06:57:20] 2025-06-06 10:57:20,304 [wrapper] ==== wrapper stderr END ====
[2025-06-06 06:57:20]  *** Error codes and diagnostics ***
[2025-06-06 06:57:20]     "exeErrorCode": 0,
[2025-06-06 06:57:20]     "exeErrorDiag": "",
[2025-06-06 06:57:20]     "pilotErrorCode": 0,
[2025-06-06 06:57:20]     "pilotErrorDiag": "",
[2025-06-06 06:57:20]  *** Listing of results directory ***
[2025-06-06 06:57:20] total 394476
[2025-06-06 06:57:20] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 05:03 queuedata.json
[2025-06-06 06:57:20] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 05:04 pilot3.tar.gz
[2025-06-06 06:57:20] -rwx------. 1 boincer umatlas     37140 Jun  4 05:04 runpilot2-wrapper.sh
[2025-06-06 06:57:20] -rw-r--r--. 1 boincer umatlas       100 Jun  6 05:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 06:57:20] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  6 05:28 run_atlas
[2025-06-06 06:57:20] -rw-r--r--. 1 boincer umatlas       105 Jun  6 05:28 job.xml
[2025-06-06 06:57:20] -rw-r--r--. 2 boincer umatlas 217024011 Jun  6 05:28 EVNT.45006593._001028.pool.root.1
[2025-06-06 06:57:20] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 05:28 start_atlas.sh
[2025-06-06 06:57:20] drwxrwx--x. 2 boincer umatlas        68 Jun  6 05:28 shared
[2025-06-06 06:57:20] -rw-r--r--. 2 boincer umatlas    508883 Jun  6 05:28 input.tar.gz
[2025-06-06 06:57:20] -rw-r--r--. 1 boincer umatlas         0 Jun  6 05:28 boinc_lockfile
[2025-06-06 06:57:20] -rw-r--r--. 1 boincer umatlas      2525 Jun  6 05:28 pandaJob.out
[2025-06-06 06:57:20] -rw-------. 1 boincer umatlas    987967 Jun  6 05:29 agis_schedconf.cvmfs.json
[2025-06-06 06:57:20] -rw-------. 1 boincer umatlas   1598969 Jun  6 05:29 agis_ddmendpoints.agis.ALL.json
[2025-06-06 06:57:20] drwx------. 4 boincer umatlas      4096 Jun  6 05:29 pilot3
[2025-06-06 06:57:20] -rw-r--r--. 1 boincer umatlas      6879 Jun  6 06:54 init_data.xml
[2025-06-06 06:57:20] -rw-r--r--. 1 boincer umatlas       529 Jun  6 06:56 boinc_task_state.xml
[2025-06-06 06:57:20] -rw-------. 1 boincer umatlas 181458620 Jun  6 06:56 HITS.45006595._056327.pool.root.1
[2025-06-06 06:57:20] -rw-------. 1 boincer umatlas        95 Jun  6 06:56 pilot_heartbeat.json
[2025-06-06 06:57:20] -rw-------. 1 boincer umatlas      1041 Jun  6 06:56 memory_monitor_summary.json
[2025-06-06 06:57:20] -rw-------. 1 boincer umatlas    316260 Jun  6 06:56 log.45006595._056327.job.log.tgz.1
[2025-06-06 06:57:20] -rw-------. 1 boincer umatlas      7724 Jun  6 06:57 heartbeat.json
[2025-06-06 06:57:20] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 06:57 boinc_mmap_file
[2025-06-06 06:57:20] -rw-r--r--. 1 boincer umatlas        27 Jun  6 06:57 wrapper_checkpoint.txt
[2025-06-06 06:57:20] -rw-------. 1 boincer umatlas      4549 Jun  6 06:57 pilotlog.txt
[2025-06-06 06:57:20] -rw-------. 1 boincer umatlas    501609 Jun  6 06:57 log.45006595._056327.job.log.1
[2025-06-06 06:57:20] -rw-------. 1 boincer umatlas       357 Jun  6 06:57 output.list
[2025-06-06 06:57:20] -rw-r--r--. 1 boincer umatlas       620 Jun  6 06:57 runtime_log
[2025-06-06 06:57:20] -rw-------. 1 boincer umatlas    839680 Jun  6 06:57 result.tar.gz
[2025-06-06 06:57:20] -rw-r--r--. 1 boincer umatlas      8654 Jun  6 06:57 runtime_log.err
[2025-06-06 06:57:20] -rw-------. 1 boincer umatlas       652 Jun  6 06:57 6NsLDmTEzg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBvnKDmDmUFHn.diag
[2025-06-06 06:57:20] -rw-r--r--. 1 boincer umatlas     21307 Jun  6 06:57 stderr.txt
[2025-06-06 06:57:20] HITS file was successfully produced:
[2025-06-06 06:57:20] -rw-------. 1 boincer umatlas 181458620 Jun  6 06:56 shared/HITS.pool.root.1
[2025-06-06 06:57:20]  *** Contents of shared directory: ***
[2025-06-06 06:57:20] total 390484
[2025-06-06 06:57:20] -rw-r--r--. 2 boincer umatlas 217024011 Jun  6 05:28 ATLAS.root_0
[2025-06-06 06:57:20] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 05:28 start_atlas.sh
[2025-06-06 06:57:20] -rw-r--r--. 2 boincer umatlas    508883 Jun  6 05:28 input.tar.gz
[2025-06-06 06:57:20] -rw-------. 1 boincer umatlas 181458620 Jun  6 06:56 HITS.pool.root.1
[2025-06-06 06:57:20] -rw-------. 1 boincer umatlas    839680 Jun  6 06:57 result.tar.gz
06:57:21 (718431): run_atlas exited; CPU time 36701.383574
06:57:21 (718431): called boinc_finish(0)

</stderr_txt>
]]>

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