Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:09:11 (1218310): wrapper (7.7.26015): starting
05:09:11 (1218310): wrapper: running run_atlas (--nthreads 10)
[2025-06-06 05:09:11] Arguments: --nthreads 10
[2025-06-06 05:09:11] Threads: 10
[2025-06-06 05:09:11] Checking for CVMFS
[2025-06-06 05:09:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 05:09:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 05:09:11] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 05:09:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 05:09:12] 2.12.6.0 709574 223439 342044 146847 3 630 23816865 32935937 14637 130560 1 381856739 99.641 369579256 26903 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-06 05:09:12] CVMFS is ok
[2025-06-06 05:09:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 05:09:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 05:09:12] Further information can be found at the LHC@home message board.
[2025-06-06 05:09:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 05:09:12] Checking for apptainer binary...
[2025-06-06 05:09:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 05:09:12] Running /usr/bin/apptainer --version
[2025-06-06 05:09:12] apptainer version 1.4.1-1.el9
[2025-06-06 05:09:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 05:09:12] c-5-6.aglt2.org
[2025-06-06 05:09:12] apptainer works
[2025-06-06 05:09:12] Set ATHENA_PROC_NUMBER=10
[2025-06-06 05:09:12] Set ATHENA_CORE_NUMBER=10
[2025-06-06 05:09:12] Starting ATLAS job with PandaID=6671981863
[2025-06-06 05:09:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 09:53:20]  *** The last 200 lines of the pilot log: ***
[2025-06-06 09:53:20] 2025-06-06 13:53:00,179 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 09:53:20] 2025-06-06 13:53:00,180 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 09:53:20] 2025-06-06 13:53:00,180 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 09:53:20] 2025-06-06 13:53:00,185 | INFO     | fitting pss+swap vs Time
[2025-06-06 09:53:20] 2025-06-06 13:53:00,186 | INFO     | sum of square deviations: 6733838698.774218
[2025-06-06 09:53:20] 2025-06-06 13:53:00,188 | INFO     | sum of deviations: -149491216387.52682
[2025-06-06 09:53:20] 2025-06-06 13:53:00,189 | INFO     | mean x: 1749209471.5591397
[2025-06-06 09:53:20] 2025-06-06 13:53:00,189 | INFO     | mean y: 2529615.6379928314
[2025-06-06 09:53:20] 2025-06-06 13:53:00,189 | INFO     | -- intersect: 38834979176.326004
[2025-06-06 09:53:20] 2025-06-06 13:53:00,189 | INFO     | intersect: 38834979176.326004
[2025-06-06 09:53:20] 2025-06-06 13:53:00,189 | INFO     | chi2: 2.808565964506551
[2025-06-06 09:53:20] 2025-06-06 13:53:00,190 | INFO     | sum of square deviations: 6378279609.682472
[2025-06-06 09:53:20] 2025-06-06 13:53:00,192 | INFO     | sum of deviations: -121567583526.50723
[2025-06-06 09:53:20] 2025-06-06 13:53:00,193 | INFO     | mean x: 1749209319.069343
[2025-06-06 09:53:20] 2025-06-06 13:53:00,193 | INFO     | mean y: 2541482.2372262776
[2025-06-06 09:53:20] 2025-06-06 13:53:00,193 | INFO     | -- intersect: 33341805831.592606
[2025-06-06 09:53:20] 2025-06-06 13:53:00,193 | INFO     | intersect: 33341805831.592606
[2025-06-06 09:53:20] 2025-06-06 13:53:00,193 | INFO     | chi2: 2.104573732275219
[2025-06-06 09:53:20] 2025-06-06 13:53:00,194 | INFO     | current chi2=2.104573732275219 (change=25.065896301816764 %)
[2025-06-06 09:53:20] 2025-06-06 13:53:00,194 | INFO     | sum of square deviations: 6035448109.687776
[2025-06-06 09:53:20] 2025-06-06 13:53:00,196 | INFO     | sum of deviations: -117836593735.42372
[2025-06-06 09:53:20] 2025-06-06 13:53:00,196 | INFO     | mean x: 1749209166.576208
[2025-06-06 09:53:20] 2025-06-06 13:53:00,197 | INFO     | mean y: 2543144.9962825277
[2025-06-06 09:53:20] 2025-06-06 13:53:00,197 | INFO     | -- intersect: 34154249227.808205
[2025-06-06 09:53:20] 2025-06-06 13:53:00,197 | INFO     | intersect: 34154249227.808205
[2025-06-06 09:53:20] 2025-06-06 13:53:00,197 | INFO     | chi2: 2.096093593140277
[2025-06-06 09:53:20] 2025-06-06 13:53:00,197 | INFO     | current chi2=2.096093593140277 (change=0.4029385620894403 %)
[2025-06-06 09:53:20] 2025-06-06 13:53:00,198 | INFO     | right removable region: 268
[2025-06-06 09:53:20] 2025-06-06 13:53:00,198 | INFO     | sum of square deviations: 6378184449.682472
[2025-06-06 09:53:20] 2025-06-06 13:53:00,200 | INFO     | sum of deviations: -191181525839.09848
[2025-06-06 09:53:20] 2025-06-06 13:53:00,200 | INFO     | mean x: 1749209624.069343
[2025-06-06 09:53:20] 2025-06-06 13:53:00,201 | INFO     | mean y: 2547342.9525547447
[2025-06-06 09:53:20] 2025-06-06 13:53:00,201 | INFO     | -- intersect: 52433857158.500656
[2025-06-06 09:53:20] 2025-06-06 13:53:00,201 | INFO     | intersect: 52433857158.500656
[2025-06-06 09:53:20] 2025-06-06 13:53:00,201 | INFO     | chi2: 1.3247363960494252
[2025-06-06 09:53:20] 2025-06-06 13:53:00,201 | INFO     | current chi2=1.3247363960494252 (change=52.83228477483263 %)
[2025-06-06 09:53:20] 2025-06-06 13:53:00,202 | INFO     | sum of square deviations: 6035274625.531606
[2025-06-06 09:53:20] 2025-06-06 13:53:00,204 | INFO     | sum of deviations: -184188129069.70636
[2025-06-06 09:53:20] 2025-06-06 13:53:00,204 | INFO     | mean x: 1749209776.5799255
[2025-06-06 09:53:20] 2025-06-06 13:53:00,204 | INFO     | mean y: 2544205.68401487
[2025-06-06 09:53:20] 2025-06-06 13:53:00,205 | INFO     | -- intersect: 53385976789.80053
[2025-06-06 09:53:20] 2025-06-06 13:53:00,205 | INFO     | intersect: 53385976789.80053
[2025-06-06 09:53:20] 2025-06-06 13:53:00,205 | INFO     | chi2: 1.303452390246902
[2025-06-06 09:53:20] 2025-06-06 13:53:00,205 | INFO     | current chi2=1.303452390246902 (change=1.6066596996953886 %)
[2025-06-06 09:53:20] 2025-06-06 13:53:00,205 | INFO     | left removable region: 20
[2025-06-06 09:53:20] 2025-06-06 13:53:00,206 | INFO     | sum of square deviations: 4729213622.838735
[2025-06-06 09:53:20] 2025-06-06 13:53:00,208 | INFO     | sum of deviations: -127168965474.79024
[2025-06-06 09:53:20] 2025-06-06 13:53:00,208 | INFO     | mean x: 1749209746.112903
[2025-06-06 09:53:20] 2025-06-06 13:53:00,208 | INFO     | mean y: 2547668.2782258065
[2025-06-06 09:53:20] 2025-06-06 13:53:00,208 | INFO     | -- intersect: 47038949817.11466
[2025-06-06 09:53:20] 2025-06-06 13:53:00,208 | INFO     | intersect: 47038949817.11466
[2025-06-06 09:53:20] 2025-06-06 13:53:00,209 | INFO     | chi2: 0.5607817246547648
[2025-06-06 09:53:20] 2025-06-06 13:53:00,209 | INFO     | -- intersect: 47038949817.11466
[2025-06-06 09:53:20] 2025-06-06 13:53:00,209 | INFO     | current memory leak: -26.89 B/s (using 248 data points, chi2=0.56)
[2025-06-06 09:53:20] 2025-06-06 13:53:00,210 | INFO     | ..............................
[2025-06-06 09:53:20] 2025-06-06 13:53:00,210 | INFO     | . Timing measurements:
[2025-06-06 09:53:20] 2025-06-06 13:53:00,210 | INFO     | . get job = 0 s
[2025-06-06 09:53:20] 2025-06-06 13:53:00,210 | INFO     | . initial setup = 3 s
[2025-06-06 09:53:20] 2025-06-06 13:53:00,210 | INFO     | . payload setup = 8 s
[2025-06-06 09:53:20] 2025-06-06 13:53:00,210 | INFO     | . stage-in = 0 s
[2025-06-06 09:53:20] 2025-06-06 13:53:00,211 | INFO     | . payload execution = 16979 s
[2025-06-06 09:53:20] 2025-06-06 13:53:00,211 | INFO     | . stage-out = 2 s
[2025-06-06 09:53:20] 2025-06-06 13:53:00,211 | INFO     | . log creation = 0 s
[2025-06-06 09:53:20] 2025-06-06 13:53:00,211 | INFO     | ..............................
[2025-06-06 09:53:20] 2025-06-06 13:53:00,317 | INFO     | 
[2025-06-06 09:53:20] 2025-06-06 13:53:00,317 | INFO     | job summary report
[2025-06-06 09:53:20] 2025-06-06 13:53:00,317 | INFO     | --------------------------------------------------
[2025-06-06 09:53:20] 2025-06-06 13:53:00,317 | INFO     | PanDA job id: 6671981863
[2025-06-06 09:53:20] 2025-06-06 13:53:00,317 | INFO     | task id: 44871837
[2025-06-06 09:53:20] 2025-06-06 13:53:00,318 | INFO     | errors: (none)
[2025-06-06 09:53:20] 2025-06-06 13:53:00,318 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 09:53:20] 2025-06-06 13:53:00,318 | INFO     | pilot state: finished 
[2025-06-06 09:53:20] 2025-06-06 13:53:00,318 | INFO     | transexitcode: 0
[2025-06-06 09:53:20] 2025-06-06 13:53:00,318 | INFO     | exeerrorcode: 0
[2025-06-06 09:53:20] 2025-06-06 13:53:00,318 | INFO     | exeerrordiag: 
[2025-06-06 09:53:20] 2025-06-06 13:53:00,318 | INFO     | exitcode: 0
[2025-06-06 09:53:20] 2025-06-06 13:53:00,318 | INFO     | exitmsg: OK
[2025-06-06 09:53:20] 2025-06-06 13:53:00,318 | INFO     | cpuconsumptiontime: 65602 s
[2025-06-06 09:53:20] 2025-06-06 13:53:00,318 | INFO     | nevents: 400
[2025-06-06 09:53:20] 2025-06-06 13:53:00,319 | INFO     | neventsw: 0
[2025-06-06 09:53:20] 2025-06-06 13:53:00,319 | INFO     | pid: 1234830
[2025-06-06 09:53:20] 2025-06-06 13:53:00,319 | INFO     | pgrp: 1234830
[2025-06-06 09:53:20] 2025-06-06 13:53:00,319 | INFO     | corecount: 10
[2025-06-06 09:53:20] 2025-06-06 13:53:00,319 | INFO     | event service: False
[2025-06-06 09:53:20] 2025-06-06 13:53:00,319 | INFO     | sizes: {0: 2397342, 4: 2397548, 11: 2397576, 16988: 2429155, 16989: 2429154, 16992: 2438151, 16993: 2438335, 17001: 2438505}
[2025-06-06 09:53:20] 2025-06-06 13:53:00,319 | INFO     | --------------------------------------------------
[2025-06-06 09:53:20] 2025-06-06 13:53:00,319 | INFO     | 
[2025-06-06 09:53:20] 2025-06-06 13:53:00,319 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 09:53:20] 2025-06-06 13:53:00,337 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 09:53:20] 2025-06-06 13:53:00,338 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 09:53:20] 2025-06-06 13:53:00,338 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 09:53:20] 2025-06-06 13:53:00,338 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 09:53:20] 2025-06-06 13:53:00,338 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 09:53:20] 2025-06-06 13:53:00,338 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 09:53:20] 2025-06-06 13:53:00,338 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 09:53:20] 2025-06-06 13:53:00,338 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 09:53:20] 2025-06-06 13:53:00,338 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 09:53:20] 2025-06-06 13:53:00,339 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 09:53:20] 2025-06-06 13:53:00,339 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 09:53:20] 2025-06-06 13:53:00,339 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 09:53:20] 2025-06-06 13:53:00,339 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 09:53:20] 2025-06-06 13:53:00,339 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 09:53:20] 2025-06-06 13:53:00,339 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 09:53:20] 2025-06-06 13:53:00,339 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 09:53:20] 2025-06-06 13:53:00,339 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 09:53:20] 2025-06-06 13:53:00,339 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 09:53:20] 2025-06-06 13:53:00,339 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 09:53:20] 2025-06-06 13:53:00,340 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 09:53:20] 2025-06-06 13:53:00,340 | INFO     | job 6671981863 has completed (purged errors)
[2025-06-06 09:53:20] 2025-06-06 13:53:00,340 | INFO     | overall cleanup function is called
[2025-06-06 09:53:20] 2025-06-06 13:53:01,348 | INFO     | --- collectZombieJob: --- 10, [1234830]
[2025-06-06 09:53:20] 2025-06-06 13:53:01,348 | INFO     | zombie collector waiting for pid 1234830
[2025-06-06 09:53:20] 2025-06-06 13:53:01,348 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 09:53:20] 2025-06-06 13:53:01,348 | INFO     | collected zombie processes
[2025-06-06 09:53:20] 2025-06-06 13:53:01,348 | INFO     | will attempt to kill all subprocesses of pid=1234830
[2025-06-06 09:53:20] 2025-06-06 13:53:01,715 | INFO     | process IDs to be killed: [1234830] (in reverse order)
[2025-06-06 09:53:20] 2025-06-06 13:53:01,824 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 09:53:20] 2025-06-06 13:53:01,824 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 09:53:20] 2025-06-06 13:53:01,838 | INFO     | did not find any defunct processes belonging to 1234830
[2025-06-06 09:53:20] 2025-06-06 13:53:01,853 | INFO     | did not find any defunct processes belonging to 1234830
[2025-06-06 09:53:20] 2025-06-06 13:53:01,853 | INFO     | ready for new job
[2025-06-06 09:53:20] 2025-06-06 13:53:01,853 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 09:53:20] 2025-06-06 13:53:01,864 | INFO     | **************************************
[2025-06-06 09:53:20] 2025-06-06 13:53:01,865 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 09:53:20] 2025-06-06 13:53:01,865 | INFO     | **************************************
[2025-06-06 09:53:20] 2025-06-06 13:53:01,865 | INFO     | 
[2025-06-06 09:53:20] 2025-06-06 13:53:01,883 | INFO     | architecture information:
[2025-06-06 09:53:20] 2025-06-06 13:53:01,883 | INFO     | executing command: cat /etc/os-release
[2025-06-06 09:53:20] 2025-06-06 13:53:01,931 | INFO     | cat /etc/os-release:
[2025-06-06 09:53:20] NAME="CentOS Linux"
[2025-06-06 09:53:20] VERSION="7 (Core)"
[2025-06-06 09:53:20] ID="centos"
[2025-06-06 09:53:20] ID_LIKE="rhel fedora"
[2025-06-06 09:53:20] VERSION_ID="7"
[2025-06-06 09:53:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 09:53:20] ANSI_COLOR="0;31"
[2025-06-06 09:53:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 09:53:20] HOME_URL="https://www.centos.org/"
[2025-06-06 09:53:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 09:53:20] 
[2025-06-06 09:53:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 09:53:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 09:53:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 09:53:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 09:53:20] 
[2025-06-06 09:53:20] 2025-06-06 13:53:01,931 | INFO     | **************************************
[2025-06-06 09:53:20] 2025-06-06 13:53:02,434 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 09:53:20] 2025-06-06 13:53:02,452 | INFO     | sufficient remaining disk space (76478939136 B)
[2025-06-06 09:53:20] 2025-06-06 13:53:02,452 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 09:53:20] 2025-06-06 13:53:02,452 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 09:53:20] 2025-06-06 13:53:02,452 | INFO     | update_server=False
[2025-06-06 09:53:20] 2025-06-06 13:53:02,452 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 09:53:20] 2025-06-06 13:53:02,453 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 09:53:20] 2025-06-06 13:53:02,453 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 09:53:20] 2025-06-06 13:53:02,453 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 09:53:20] 2025-06-06 13:53:02,453 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 09:53:20] 2025-06-06 13:53:02,454 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 09:53:20] 2025-06-06 13:53:02,546 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 09:53:20] 2025-06-06 13:53:02,546 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 09:53:20] 2025-06-06 13:53:02,546 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 09:53:20] 2025-06-06 13:53:02,547 | INFO     | will abort loop
[2025-06-06 09:53:20] 2025-06-06 13:53:02,601 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 09:53:20] 2025-06-06 13:53:03,246 | INFO     | all data control threads have been joined
[2025-06-06 09:53:20] 2025-06-06 13:53:03,458 | INFO     | [job] retrieve thread has finished
[2025-06-06 09:53:20] 2025-06-06 13:53:03,552 | INFO     | [job] validate thread has finished
[2025-06-06 09:53:20] 2025-06-06 13:53:03,552 | INFO     | [job] job monitor thread has finished
[2025-06-06 09:53:20] 2025-06-06 13:53:03,559 | INFO     | all job control threads have been joined
[2025-06-06 09:53:20] 2025-06-06 13:53:03,628 | INFO     | all payload control threads have been joined
[2025-06-06 09:53:20] 2025-06-06 13:53:04,113 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 09:53:20] 2025-06-06 13:53:04,177 | INFO     | [data] copytool_in thread has finished
[2025-06-06 09:53:20] 2025-06-06 13:53:04,184 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 09:53:20] 2025-06-06 13:53:04,252 | INFO     | [data] control thread has finished
[2025-06-06 09:53:20] 2025-06-06 13:53:04,266 | INFO     | [payload] failed_post thread has finished
[2025-06-06 09:53:20] 2025-06-06 13:53:04,460 | INFO     | [data] copytool_out thread has finished
[2025-06-06 09:53:20] 2025-06-06 13:53:04,565 | INFO     | [job] control thread has finished
[2025-06-06 09:53:20] 2025-06-06 13:53:04,633 | INFO     | [payload] control thread has finished
[2025-06-06 09:53:20] 2025-06-06 13:53:04,838 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 09:53:20] 2025-06-06 13:53:04,890 | INFO     | [payload] validate_post thread has finished
[2025-06-06 09:53:20] 2025-06-06 13:53:05,333 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 09:53:20] 2025-06-06 13:53:06,338 | INFO     | [job] queue monitor thread has finished
[2025-06-06 09:53:20] 2025-06-06 13:53:06,607 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 09:53:20] 2025-06-06 13:53:13,501 | INFO     | job.realtimelogging is not enabled
[2025-06-06 09:53:20] 2025-06-06 13:53:14,507 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 09:53:20] 2025-06-06 13:53:15,124 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139966461454144)>', '<ExcThread(monitor, started 139965971281664)>']
[2025-06-06 09:53:20] 2025-06-06 13:53:15,521 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 09:53:20] 2025-06-06 13:53:15,522 | INFO     | [monitor] control thread has ended
[2025-06-06 09:53:20] 2025-06-06 13:53:20,149 | INFO     | all workflow threads have been joined
[2025-06-06 09:53:20] 2025-06-06 13:53:20,149 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 09:53:20] 2025-06-06 13:53:20,149 | INFO     | traces error code: 0
[2025-06-06 09:53:20] 2025-06-06 13:53:20,150 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 09:53:20] 2025-06-06 13:53:20,303 [wrapper] ==== pilot stdout END ====
[2025-06-06 09:53:20] 2025-06-06 13:53:20,306 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 09:53:20] 2025-06-06 13:53:20,310 [wrapper] pilotpid: 1221893
[2025-06-06 09:53:20] 2025-06-06 13:53:20,315 [wrapper] Pilot exit status: 0
[2025-06-06 09:53:20] 2025-06-06 13:53:20,368 [wrapper] pandaids: 6671981863
[2025-06-06 09:53:20] 2025-06-06 13:53:20,444 [wrapper] cleanup supervisor_pilot 2460946 1221894
[2025-06-06 09:53:20] 2025-06-06 13:53:20,449 [wrapper] Test setup, not cleaning
[2025-06-06 09:53:20] 2025-06-06 13:53:20,453 [wrapper] apfmon messages muted
[2025-06-06 09:53:20] 2025-06-06 13:53:20,456 [wrapper] ==== wrapper stdout END ====
[2025-06-06 09:53:20] 2025-06-06 13:53:20,460 [wrapper] ==== wrapper stderr END ====
[2025-06-06 09:53:20]  *** Error codes and diagnostics ***
[2025-06-06 09:53:20]     "exeErrorCode": 0,
[2025-06-06 09:53:20]     "exeErrorDiag": "",
[2025-06-06 09:53:20]     "pilotErrorCode": 0,
[2025-06-06 09:53:20]     "pilotErrorDiag": "",
[2025-06-06 09:53:20]  *** Listing of results directory ***
[2025-06-06 09:53:20] total 422500
[2025-06-06 09:53:20] -rw-r--r--. 1 boincer umatlas    495897 May 29 09:13 pilot3.tar.gz
[2025-06-06 09:53:20] -rw-r--r--. 1 boincer umatlas      5111 May 29 09:13 queuedata.json
[2025-06-06 09:53:20] -rwx------. 1 boincer umatlas     37140 May 29 09:14 runpilot2-wrapper.sh
[2025-06-06 09:53:20] -rw-r--r--. 1 boincer umatlas       100 Jun  6 05:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 09:53:20] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  6 05:09 run_atlas
[2025-06-06 09:53:20] -rw-r--r--. 1 boincer umatlas       105 Jun  6 05:09 job.xml
[2025-06-06 09:53:20] -rw-r--r--. 2 boincer umatlas 223288976 Jun  6 05:09 EVNT.44871834._003388.pool.root.1
[2025-06-06 09:53:20] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 05:09 start_atlas.sh
[2025-06-06 09:53:20] drwxrwx--x. 2 boincer umatlas      4096 Jun  6 05:09 shared
[2025-06-06 09:53:20] -rw-r--r--. 2 boincer umatlas    508883 Jun  6 05:09 input.tar.gz
[2025-06-06 09:53:20] -rw-r--r--. 1 boincer umatlas         0 Jun  6 05:09 boinc_lockfile
[2025-06-06 09:53:20] -rw-r--r--. 1 boincer umatlas      2559 Jun  6 05:09 pandaJob.out
[2025-06-06 09:53:20] -rw-------. 1 boincer umatlas    987967 Jun  6 05:09 agis_schedconf.cvmfs.json
[2025-06-06 09:53:20] drwx------. 4 boincer umatlas      4096 Jun  6 05:09 pilot3
[2025-06-06 09:53:20] -rw-r--r--. 1 boincer umatlas      6672 Jun  6 09:47 init_data.xml
[2025-06-06 09:53:20] -rw-------. 1 boincer umatlas 201829066 Jun  6 09:52 HITS.44871837._100697.pool.root.1
[2025-06-06 09:53:20] -rw-r--r--. 1 boincer umatlas       530 Jun  6 09:52 boinc_task_state.xml
[2025-06-06 09:53:20] -rw-------. 1 boincer umatlas      1057 Jun  6 09:52 memory_monitor_summary.json
[2025-06-06 09:53:20] -rw-------. 1 boincer umatlas   1598969 Jun  6 09:52 agis_ddmendpoints.agis.ALL.json
[2025-06-06 09:53:20] -rw-------. 1 boincer umatlas    448986 Jun  6 09:52 log.44871837._100697.job.log.tgz.1
[2025-06-06 09:53:20] -rw-------. 1 boincer umatlas        95 Jun  6 09:52 pilot_heartbeat.json
[2025-06-06 09:53:20] -rw-------. 1 boincer umatlas      7751 Jun  6 09:53 heartbeat.json
[2025-06-06 09:53:20] -rw-------. 1 boincer umatlas      4734 Jun  6 09:53 pilotlog.txt
[2025-06-06 09:53:20] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 09:53 boinc_mmap_file
[2025-06-06 09:53:20] -rw-r--r--. 1 boincer umatlas        28 Jun  6 09:53 wrapper_checkpoint.txt
[2025-06-06 09:53:20] -rw-------. 1 boincer umatlas   1400420 Jun  6 09:53 log.44871837._100697.job.log.1
[2025-06-06 09:53:20] -rw-------. 1 boincer umatlas       357 Jun  6 09:53 output.list
[2025-06-06 09:53:20] -rw-r--r--. 1 boincer umatlas       620 Jun  6 09:53 runtime_log
[2025-06-06 09:53:20] -rw-------. 1 boincer umatlas   1863680 Jun  6 09:53 result.tar.gz
[2025-06-06 09:53:20] -rw-r--r--. 1 boincer umatlas      8647 Jun  6 09:53 runtime_log.err
[2025-06-06 09:53:20] -rw-------. 1 boincer umatlas       659 Jun  6 09:53 nQJKDmLGse7n9Rq4apOajLDm4fhM0noT9bVof3QYDmWGVKDmKpWhrm.diag
[2025-06-06 09:53:20] -rw-r--r--. 1 boincer umatlas     20909 Jun  6 09:53 stderr.txt
[2025-06-06 09:53:20] HITS file was successfully produced:
[2025-06-06 09:53:20] -rw-------. 1 boincer umatlas 201829066 Jun  6 09:52 shared/HITS.pool.root.1
[2025-06-06 09:53:20]  *** Contents of shared directory: ***
[2025-06-06 09:53:20] total 417496
[2025-06-06 09:53:20] -rw-r--r--. 2 boincer umatlas 223288976 Jun  6 05:09 ATLAS.root_0
[2025-06-06 09:53:20] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 05:09 start_atlas.sh
[2025-06-06 09:53:20] -rw-r--r--. 2 boincer umatlas    508883 Jun  6 05:09 input.tar.gz
[2025-06-06 09:53:20] -rw-------. 1 boincer umatlas 201829066 Jun  6 09:52 HITS.pool.root.1
[2025-06-06 09:53:20] -rw-------. 1 boincer umatlas   1863680 Jun  6 09:53 result.tar.gz
09:53:22 (1218310): run_atlas exited; CPU time 66093.246304
09:53:22 (1218310): called boinc_finish(0)

</stderr_txt>
]]>

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