Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:52:49 (1074576): wrapper (7.7.26015): starting
04:52:49 (1074576): wrapper: running run_atlas (--nthreads 8)
[2025-06-06 04:52:49] Arguments: --nthreads 8
[2025-06-06 04:52:49] Threads: 8
[2025-06-06 04:52:49] Checking for CVMFS
[2025-06-06 04:52:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 04:52:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 04:52:49] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 04:52:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 04:52:49] 2.12.6.0 2939844 25911 525384 146847 3 675 26736635 40960000 7065 16776704 1 134942369 99.698 111102275 28006 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-06 04:52:49] CVMFS is ok
[2025-06-06 04:52:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 04:52:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 04:52:49] Further information can be found at the LHC@home message board.
[2025-06-06 04:52:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 04:52:49] Checking for apptainer binary...
[2025-06-06 04:52:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 04:52:49] Running /usr/bin/apptainer --version
[2025-06-06 04:52:49] apptainer version 1.4.1-1.el9
[2025-06-06 04:52:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 04:52:49] c7-11-15.aglt2.org
[2025-06-06 04:52:49] apptainer works
[2025-06-06 04:52:49] Set ATHENA_PROC_NUMBER=8
[2025-06-06 04:52:49] Set ATHENA_CORE_NUMBER=8
[2025-06-06 04:52:49] Starting ATLAS job with PandaID=6667732067
[2025-06-06 04:52:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
05:00:05 (1119120): wrapper (7.7.26015): starting
05:00:05 (1119120): wrapper: running run_atlas (--nthreads 8)
[2025-06-06 05:00:05] Arguments: --nthreads 8
[2025-06-06 05:00:05] Threads: 8
[2025-06-06 05:00:05] This job has been restarted, cleaning up previous attempt
[2025-06-06 05:00:05] Checking for CVMFS
[2025-06-06 05:00:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 05:00:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 05:00:05] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 05:00:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 05:00:06] 2.12.6.0 2939844 25918 532116 146847 0 842 26736635 40960000 8653 16776704 1 135018324 99.699 111102275 28006 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-06 05:00:06] CVMFS is ok
[2025-06-06 05:00:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 05:00:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 05:00:06] Further information can be found at the LHC@home message board.
[2025-06-06 05:00:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 05:00:06] Checking for apptainer binary...
[2025-06-06 05:00:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 05:00:06] Running /usr/bin/apptainer --version
[2025-06-06 05:00:06] apptainer version 1.4.1-1.el9
[2025-06-06 05:00:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 05:00:06] c7-11-15.aglt2.org
[2025-06-06 05:00:06] apptainer works
[2025-06-06 05:00:06] Set ATHENA_PROC_NUMBER=8
[2025-06-06 05:00:06] Set ATHENA_CORE_NUMBER=8
[2025-06-06 05:00:06] Starting ATLAS job with PandaID=6667732067
[2025-06-06 05:00:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 06:17:02]  *** The last 200 lines of the pilot log: ***
[2025-06-06 06:17:02]  lfn=log.44871837._075501.job.log.tgz.1
[2025-06-06 06:17:02]  mtime=0
[2025-06-06 06:17:02]  protocol_id=None
[2025-06-06 06:17:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 06:17:02]  replicas=None
[2025-06-06 06:17:02]  scope=mc23_13p6TeV
[2025-06-06 06:17:02]  status=None
[2025-06-06 06:17:02]  status_code=0
[2025-06-06 06:17:02]  storage_token=
[2025-06-06 06:17:02]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6667732067/log.44871837._075501.job.log.tgz.1
[2025-06-06 06:17:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/82/d6/log.44871837._075501.job.log.tgz.1
[2025-06-06 06:17:02]  workdir=None
[2025-06-06 06:17:02] ]
[2025-06-06 06:17:02] 2025-06-06 10:16:24,825 | INFO     | transferring file log.44871837._075501.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6667732067/log.44871837._075501.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-06 06:17:02] 2025-06-06 10:16:24,825 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6667732067/log.44871837._075501.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._075501.job
[2025-06-06 06:17:02] 2025-06-06 10:16:24,845 | INFO     | adding to output.list: log.44871837._075501.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/82/d6/log.44871837._075501.job.log.tg
[2025-06-06 06:17:02] 2025-06-06 10:16:24,847 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 06:17:02] 2025-06-06 10:16:24,847 | INFO     | summary of transferred files:
[2025-06-06 06:17:02] 2025-06-06 10:16:24,847 | INFO     |  -- lfn=log.44871837._075501.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 06:17:02] 2025-06-06 10:16:24,847 | INFO     | stage-out finished correctly
[2025-06-06 06:17:02] 2025-06-06 10:16:26,064 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 06:17:02] 2025-06-06 10:16:26,118 | INFO     | job 6667732067 has state=finished
[2025-06-06 06:17:02] 2025-06-06 10:16:26,118 | INFO     | preparing for final server update for job 6667732067 in state='finished'
[2025-06-06 06:17:02] 2025-06-06 10:16:26,118 | INFO     | this job has now completed (state=finished)
[2025-06-06 06:17:02] 2025-06-06 10:16:26,118 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 06:17:02] 2025-06-06 10:16:26,119 | INFO     | log transfer has been attempted: DONE
[2025-06-06 06:17:02] 2025-06-06 10:16:26,119 | INFO     | job 6667732067 has finished - writing final server update
[2025-06-06 06:17:02] 2025-06-06 10:16:26,119 | INFO     | total number of processed events: 400 (read)
[2025-06-06 06:17:02] 2025-06-06 10:16:26,120 | INFO     | executing command: lscpu
[2025-06-06 06:17:02] 2025-06-06 10:16:26,182 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 06:17:02] 2025-06-06 10:16:26,418 | WARNING  | process 1131642 can no longer be monitored (due to stat problems) - aborting
[2025-06-06 06:17:02] 2025-06-06 10:16:26,419 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667732067/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 06:17:02] 2025-06-06 10:16:26,669 | INFO     | number of running child processes to parent process 1131642: 1
[2025-06-06 06:17:02] 2025-06-06 10:16:26,669 | INFO     | maximum number of monitored processes: 6
[2025-06-06 06:17:02] 2025-06-06 10:16:29,172 | INFO     | monitor loop #342: job 0:6667732067 is in state 'finished'
[2025-06-06 06:17:02] 2025-06-06 10:16:29,172 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 06:17:02] 2025-06-06 10:16:29,910 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 06:17:02] 2025-06-06 10:16:29,913 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3202.2649375
[2025-06-06 06:17:02] 2025-06-06 10:16:29,933 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667732067/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 06:17:02] 2025-06-06 10:16:29,933 | INFO     | extracted standard info from prmon json
[2025-06-06 06:17:02] 2025-06-06 10:16:29,933 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 06:17:02] 2025-06-06 10:16:29,933 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 06:17:02] 2025-06-06 10:16:29,933 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 06:17:02] 2025-06-06 10:16:29,934 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 06:17:02] 2025-06-06 10:16:29,934 | INFO     | fitting pss+swap vs Time
[2025-06-06 06:17:02] 2025-06-06 10:16:29,935 | INFO     | sum of square deviations: 97479037.0
[2025-06-06 06:17:02] 2025-06-06 10:16:29,935 | INFO     | sum of deviations: 732400465.0
[2025-06-06 06:17:02] 2025-06-06 10:16:29,935 | INFO     | mean x: 1749202786.5
[2025-06-06 06:17:02] 2025-06-06 10:16:29,935 | INFO     | mean y: 2638950.5588235296
[2025-06-06 06:17:02] 2025-06-06 10:16:29,935 | INFO     | -- intersect: -13139847615.161926
[2025-06-06 06:17:02] 2025-06-06 10:16:29,935 | INFO     | intersect: -13139847615.161926
[2025-06-06 06:17:02] 2025-06-06 10:16:29,935 | INFO     | chi2: 0.0080874425735522
[2025-06-06 06:17:02] 2025-06-06 10:16:29,935 | INFO     | -- intersect: -13139847615.161926
[2025-06-06 06:17:02] 2025-06-06 10:16:29,935 | INFO     | current memory leak: 7.51 B/s (using 68 data points, chi2=0.01)
[2025-06-06 06:17:02] 2025-06-06 10:16:29,935 | INFO     | could have reported an average CPU frequency of 3189 MHz (6 samples)
[2025-06-06 06:17:02] 2025-06-06 10:16:29,935 | INFO     | ..............................
[2025-06-06 06:17:02] 2025-06-06 10:16:29,936 | INFO     | . Timing measurements:
[2025-06-06 06:17:02] 2025-06-06 10:16:29,936 | INFO     | . get job = 0 s
[2025-06-06 06:17:02] 2025-06-06 10:16:29,936 | INFO     | . initial setup = 0 s
[2025-06-06 06:17:02] 2025-06-06 10:16:29,936 | INFO     | . payload setup = 6 s
[2025-06-06 06:17:02] 2025-06-06 10:16:29,936 | INFO     | . stage-in = 0 s
[2025-06-06 06:17:02] 2025-06-06 10:16:29,936 | INFO     | . payload execution = 4545 s
[2025-06-06 06:17:02] 2025-06-06 10:16:29,936 | INFO     | . stage-out = 0 s
[2025-06-06 06:17:02] 2025-06-06 10:16:29,936 | INFO     | . log creation = 0 s
[2025-06-06 06:17:02] 2025-06-06 10:16:29,936 | INFO     | ..............................
[2025-06-06 06:17:02] 2025-06-06 10:16:30,008 | INFO     | 
[2025-06-06 06:17:02] 2025-06-06 10:16:30,008 | INFO     | job summary report
[2025-06-06 06:17:02] 2025-06-06 10:16:30,008 | INFO     | --------------------------------------------------
[2025-06-06 06:17:02] 2025-06-06 10:16:30,008 | INFO     | PanDA job id: 6667732067
[2025-06-06 06:17:02] 2025-06-06 10:16:30,008 | INFO     | task id: 44871837
[2025-06-06 06:17:02] 2025-06-06 10:16:30,009 | INFO     | errors: (none)
[2025-06-06 06:17:02] 2025-06-06 10:16:30,009 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 06:17:02] 2025-06-06 10:16:30,009 | INFO     | pilot state: finished 
[2025-06-06 06:17:02] 2025-06-06 10:16:30,009 | INFO     | transexitcode: 0
[2025-06-06 06:17:02] 2025-06-06 10:16:30,009 | INFO     | exeerrorcode: 0
[2025-06-06 06:17:02] 2025-06-06 10:16:30,009 | INFO     | exeerrordiag: 
[2025-06-06 06:17:02] 2025-06-06 10:16:30,009 | INFO     | exitcode: 0
[2025-06-06 06:17:02] 2025-06-06 10:16:30,009 | INFO     | exitmsg: OK
[2025-06-06 06:17:02] 2025-06-06 10:16:30,009 | INFO     | cpuconsumptiontime: 34298 s
[2025-06-06 06:17:02] 2025-06-06 10:16:30,009 | INFO     | nevents: 400
[2025-06-06 06:17:02] 2025-06-06 10:16:30,009 | INFO     | neventsw: 0
[2025-06-06 06:17:02] 2025-06-06 10:16:30,009 | INFO     | pid: 1131642
[2025-06-06 06:17:02] 2025-06-06 10:16:30,009 | INFO     | pgrp: 1131642
[2025-06-06 06:17:02] 2025-06-06 10:16:30,010 | INFO     | corecount: 8
[2025-06-06 06:17:02] 2025-06-06 10:16:30,010 | INFO     | event service: False
[2025-06-06 06:17:02] 2025-06-06 10:16:30,010 | INFO     | sizes: {0: 2397619, 1: 2397761, 4: 2398023, 11: 2398051, 4556: 2424361, 4558: 2433302, 4559: 2433486, 4563: 2433680}
[2025-06-06 06:17:02] 2025-06-06 10:16:30,010 | INFO     | --------------------------------------------------
[2025-06-06 06:17:02] 2025-06-06 10:16:30,010 | INFO     | 
[2025-06-06 06:17:02] 2025-06-06 10:16:30,010 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 06:17:02] 2025-06-06 10:16:30,032 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 06:17:02] 2025-06-06 10:16:30,033 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 06:17:02] 2025-06-06 10:16:30,033 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 06:17:02] 2025-06-06 10:16:30,033 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 06:17:02] 2025-06-06 10:16:30,033 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 06:17:02] 2025-06-06 10:16:30,033 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 06:17:02] 2025-06-06 10:16:30,033 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 06:17:02] 2025-06-06 10:16:30,033 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 06:17:02] 2025-06-06 10:16:30,033 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 06:17:02] 2025-06-06 10:16:30,033 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 06:17:02] 2025-06-06 10:16:30,033 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 06:17:02] 2025-06-06 10:16:30,033 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 06:17:02] 2025-06-06 10:16:30,033 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 06:17:02] 2025-06-06 10:16:30,034 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 06:17:02] 2025-06-06 10:16:30,034 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 06:17:02] 2025-06-06 10:16:30,034 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 06:17:02] 2025-06-06 10:16:30,034 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 06:17:02] 2025-06-06 10:16:30,034 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 06:17:02] 2025-06-06 10:16:30,034 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 06:17:02] 2025-06-06 10:16:30,034 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 06:17:02] 2025-06-06 10:16:30,034 | INFO     | job 6667732067 has completed (purged errors)
[2025-06-06 06:17:02] 2025-06-06 10:16:30,034 | INFO     | overall cleanup function is called
[2025-06-06 06:17:02] 2025-06-06 10:16:31,042 | INFO     | --- collectZombieJob: --- 10, [1131642]
[2025-06-06 06:17:02] 2025-06-06 10:16:31,042 | INFO     | zombie collector waiting for pid 1131642
[2025-06-06 06:17:02] 2025-06-06 10:16:31,042 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 06:17:02] 2025-06-06 10:16:31,042 | INFO     | collected zombie processes
[2025-06-06 06:17:02] 2025-06-06 10:16:31,042 | INFO     | will attempt to kill all subprocesses of pid=1131642
[2025-06-06 06:17:02] 2025-06-06 10:16:31,271 | INFO     | process IDs to be killed: [1131642] (in reverse order)
[2025-06-06 06:17:02] 2025-06-06 10:16:31,382 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 06:17:02] 2025-06-06 10:16:31,382 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 06:17:02] 2025-06-06 10:16:31,395 | INFO     | did not find any defunct processes belonging to 1131642
[2025-06-06 06:17:02] 2025-06-06 10:16:31,409 | INFO     | did not find any defunct processes belonging to 1131642
[2025-06-06 06:17:02] 2025-06-06 10:16:31,409 | INFO     | ready for new job
[2025-06-06 06:17:02] 2025-06-06 10:16:31,410 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 06:17:02] 2025-06-06 10:16:31,411 | INFO     | ***************************************
[2025-06-06 06:17:02] 2025-06-06 10:16:31,411 | INFO     | ***  PanDA Pilot version 3.10.3.82  ***
[2025-06-06 06:17:02] 2025-06-06 10:16:31,411 | INFO     | ***************************************
[2025-06-06 06:17:02] 2025-06-06 10:16:31,411 | INFO     | 
[2025-06-06 06:17:02] 2025-06-06 10:16:31,426 | INFO     | architecture information:
[2025-06-06 06:17:02] 2025-06-06 10:16:31,427 | INFO     | executing command: cat /etc/os-release
[2025-06-06 06:17:02] 2025-06-06 10:16:31,441 | INFO     | cat /etc/os-release:
[2025-06-06 06:17:02] NAME="CentOS Linux"
[2025-06-06 06:17:02] VERSION="7 (Core)"
[2025-06-06 06:17:02] ID="centos"
[2025-06-06 06:17:02] ID_LIKE="rhel fedora"
[2025-06-06 06:17:02] VERSION_ID="7"
[2025-06-06 06:17:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 06:17:02] ANSI_COLOR="0;31"
[2025-06-06 06:17:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 06:17:02] HOME_URL="https://www.centos.org/"
[2025-06-06 06:17:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 06:17:02] 
[2025-06-06 06:17:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 06:17:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 06:17:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 06:17:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 06:17:02] 
[2025-06-06 06:17:02] 2025-06-06 10:16:31,441 | INFO     | ***************************************
[2025-06-06 06:17:02] 2025-06-06 10:16:31,944 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 06:17:02] 2025-06-06 10:16:31,966 | INFO     | sufficient remaining disk space (86490742784 B)
[2025-06-06 06:17:02] 2025-06-06 10:16:31,966 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 06:17:02] 2025-06-06 10:16:31,966 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 06:17:02] 2025-06-06 10:16:31,966 | INFO     | update_server=False
[2025-06-06 06:17:02] 2025-06-06 10:16:31,966 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 06:17:02] 2025-06-06 10:16:31,966 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 06:17:02] 2025-06-06 10:16:32,018 | INFO     | all job control threads have been joined
[2025-06-06 06:17:02] 2025-06-06 10:16:32,106 | INFO     | all payload control threads have been joined
[2025-06-06 06:17:02] 2025-06-06 10:16:32,112 | INFO     | all data control threads have been joined
[2025-06-06 06:17:02] 2025-06-06 10:16:32,125 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 06:17:02] 2025-06-06 10:16:32,678 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 06:17:02] 2025-06-06 10:16:32,678 | INFO     | aborting loop
[2025-06-06 06:17:02] 2025-06-06 10:16:32,913 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 06:17:02] 2025-06-06 10:16:32,971 | INFO     | [job] retrieve thread has finished
[2025-06-06 06:17:02] 2025-06-06 10:16:32,972 | INFO     | [job] queue monitor thread has finished
[2025-06-06 06:17:02] 2025-06-06 10:16:33,024 | INFO     | [job] control thread has finished
[2025-06-06 06:17:02] 2025-06-06 10:16:33,111 | INFO     | [payload] control thread has finished
[2025-06-06 06:17:02] 2025-06-06 10:16:33,117 | INFO     | [data] control thread has finished
[2025-06-06 06:17:02] 2025-06-06 10:16:33,404 | INFO     | [job] validate thread has finished
[2025-06-06 06:17:02] 2025-06-06 10:16:33,683 | INFO     | [job] job monitor thread has finished
[2025-06-06 06:17:02] 2025-06-06 10:16:33,768 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 06:17:02] 2025-06-06 10:16:33,817 | INFO     | [payload] failed_post thread has finished
[2025-06-06 06:17:02] 2025-06-06 10:16:33,864 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 06:17:02] 2025-06-06 10:16:33,886 | INFO     | [payload] validate_post thread has finished
[2025-06-06 06:17:02] 2025-06-06 10:16:34,122 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 06:17:02] 2025-06-06 10:16:34,132 | INFO     | [data] copytool_in thread has finished
[2025-06-06 06:17:02] 2025-06-06 10:16:34,919 | INFO     | [data] copytool_out thread has finished
[2025-06-06 06:17:02] 2025-06-06 10:16:36,131 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 06:17:02] 2025-06-06 10:16:42,952 | INFO     | job.realtimelogging is not enabled
[2025-06-06 06:17:02] 2025-06-06 10:16:43,958 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 06:17:02] 2025-06-06 10:16:45,186 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140549827675968)>', '<ExcThread(monitor, started 140549466068736)>']
[2025-06-06 06:17:02] 2025-06-06 10:16:50,211 | INFO     | all workflow threads have been joined
[2025-06-06 06:17:02] 2025-06-06 10:16:50,211 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 06:17:02] 2025-06-06 10:16:50,211 | INFO     | traces error code: 0
[2025-06-06 06:17:02] 2025-06-06 10:16:50,211 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 06:17:02] 2025-06-06 10:17:02,300 | INFO     | PID=1123857 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-06 06:17:02] 2025-06-06 10:17:02,300 | INFO     | .. there are 14 such processes running
[2025-06-06 06:17:02] 2025-06-06 10:17:02,301 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 06:17:02] 2025-06-06 10:17:02,301 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 06:17:02] 2025-06-06 10:17:02,301 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 06:17:02] 2025-06-06 10:17:02,301 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 06:17:02] 2025-06-06 10:17:02,301 | INFO     | [monitor] control thread has ended
[2025-06-06 06:17:02] 2025-06-06 10:17:02,417 [wrapper] ==== pilot stdout END ====
[2025-06-06 06:17:02] 2025-06-06 10:17:02,420 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 06:17:02] 2025-06-06 10:17:02,422 [wrapper] pilotpid: 1123857
[2025-06-06 06:17:02] 2025-06-06 10:17:02,425 [wrapper] Pilot exit status: 0
[2025-06-06 06:17:02] 2025-06-06 10:17:02,433 [wrapper] pandaids: 6667732067 6667732067
[2025-06-06 06:17:02] 2025-06-06 10:17:02,492 [wrapper] cleanup supervisor_pilot 1605270 1123858
[2025-06-06 06:17:02] 2025-06-06 10:17:02,494 [wrapper] Test setup, not cleaning
[2025-06-06 06:17:02] 2025-06-06 10:17:02,496 [wrapper] apfmon messages muted
[2025-06-06 06:17:02] 2025-06-06 10:17:02,498 [wrapper] ==== wrapper stdout END ====
[2025-06-06 06:17:02] 2025-06-06 10:17:02,500 [wrapper] ==== wrapper stderr END ====
[2025-06-06 06:17:02]  *** Error codes and diagnostics ***
[2025-06-06 06:17:02]     "exeErrorCode": 0,
[2025-06-06 06:17:02]     "exeErrorDiag": "",
[2025-06-06 06:17:02]     "pilotErrorCode": 0,
[2025-06-06 06:17:02]     "pilotErrorDiag": "",
[2025-06-06 06:17:02]  *** Listing of results directory ***
[2025-06-06 06:17:02] total 635652
[2025-06-06 06:17:02] drwx------. 4 boincer umatlas      4096 Jun  2 05:00 pilot3
[2025-06-06 06:17:02] -rw-r--r--. 1 boincer umatlas    529402 Jun  6 04:30 pilot3.tar.gz
[2025-06-06 06:17:02] -rwx------. 1 boincer umatlas     37140 Jun  6 04:51 runpilot2-wrapper.sh
[2025-06-06 06:17:02] -rw-r--r--. 1 boincer umatlas      5112 Jun  6 04:51 queuedata.json
[2025-06-06 06:17:02] -rw-r--r--. 1 boincer umatlas       100 Jun  6 04:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 06:17:02] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  6 04:52 run_atlas
[2025-06-06 06:17:02] -rw-r--r--. 1 boincer umatlas       105 Jun  6 04:52 job.xml
[2025-06-06 06:17:02] -rw-r--r--. 3 boincer umatlas 225682146 Jun  6 04:52 EVNT.44871834._002958.pool.root.1
[2025-06-06 06:17:02] -rw-r--r--. 3 boincer umatlas 225682146 Jun  6 04:52 ATLAS.root_0
[2025-06-06 06:17:02] drwxrwx--x. 2 boincer umatlas      4096 Jun  6 04:52 shared
[2025-06-06 06:17:02] -rw-r--r--. 2 boincer umatlas    541904 Jun  6 04:52 input.tar.gz
[2025-06-06 06:17:02] -rw-r--r--. 2 boincer umatlas     15095 Jun  6 04:52 start_atlas.sh
[2025-06-06 06:17:02] -rw-r--r--. 1 boincer umatlas         0 Jun  6 04:52 boinc_lockfile
[2025-06-06 06:17:02] -rw-------. 1 boincer umatlas   1598969 Jun  6 04:52 agis_ddmendpoints.agis.ALL.json
[2025-06-06 06:17:02] -rw-r--r--. 1 boincer umatlas      2559 Jun  6 05:00 pandaJob.out
[2025-06-06 06:17:02] -rw-------. 1 boincer umatlas    987967 Jun  6 05:00 agis_schedconf.cvmfs.json
[2025-06-06 06:17:02] -rw-r--r--. 1 boincer umatlas      6897 Jun  6 06:10 init_data.xml
[2025-06-06 06:17:02] -rw-r--r--. 1 boincer umatlas       530 Jun  6 06:15 boinc_task_state.xml
[2025-06-06 06:17:02] -rw-------. 1 boincer umatlas 194124277 Jun  6 06:15 HITS.44871837._075501.pool.root.1
[2025-06-06 06:17:02] -rw-------. 1 boincer umatlas      1027 Jun  6 06:16 memory_monitor_summary.json
[2025-06-06 06:17:02] -rw-------. 1 boincer umatlas    305583 Jun  6 06:16 log.44871837._075501.job.log.tgz.1
[2025-06-06 06:17:02] -rw-------. 1 boincer umatlas      7695 Jun  6 06:16 heartbeat.json
[2025-06-06 06:17:02] -rw-r--r--. 1 boincer umatlas        27 Jun  6 06:16 wrapper_checkpoint.txt
[2025-06-06 06:17:02] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 06:16 boinc_mmap_file
[2025-06-06 06:17:02] -rw-------. 1 boincer umatlas        95 Jun  6 06:17 pilot_heartbeat.json
[2025-06-06 06:17:02] -rw-------. 1 boincer umatlas       823 Jun  6 06:17 pilotlog.txt
[2025-06-06 06:17:02] -rw-------. 1 boincer umatlas    456270 Jun  6 06:17 log.44871837._075501.job.log.1
[2025-06-06 06:17:02] -rw-------. 1 boincer umatlas       357 Jun  6 06:17 output.list
[2025-06-06 06:17:02] -rw-r--r--. 1 boincer umatlas       620 Jun  6 06:17 runtime_log
[2025-06-06 06:17:02] -rw-------. 1 boincer umatlas    778240 Jun  6 06:17 result.tar.gz
[2025-06-06 06:17:02] -rw-r--r--. 1 boincer umatlas      8745 Jun  6 06:17 runtime_log.err
[2025-06-06 06:17:02] -rw-------. 1 boincer umatlas       775 Jun  6 06:17 BsnKDmiyhh7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmk6nKDm661DTn.diag
[2025-06-06 06:17:02] -rw-r--r--. 1 boincer umatlas     23836 Jun  6 06:17 stderr.txt
[2025-06-06 06:17:02] HITS file was successfully produced:
[2025-06-06 06:17:02] -rw-------. 1 boincer umatlas 194124277 Jun  6 06:15 shared/HITS.pool.root.1
[2025-06-06 06:17:02]  *** Contents of shared directory: ***
[2025-06-06 06:17:02] total 411284
[2025-06-06 06:17:02] -rw-r--r--. 3 boincer umatlas 225682146 Jun  6 04:52 ATLAS.root_0
[2025-06-06 06:17:02] -rw-r--r--. 2 boincer umatlas    541904 Jun  6 04:52 input.tar.gz
[2025-06-06 06:17:02] -rw-r--r--. 2 boincer umatlas     15095 Jun  6 04:52 start_atlas.sh
[2025-06-06 06:17:02] -rw-------. 1 boincer umatlas 194124277 Jun  6 06:15 HITS.pool.root.1
[2025-06-06 06:17:02] -rw-------. 1 boincer umatlas    778240 Jun  6 06:17 result.tar.gz
06:17:04 (1119120): run_atlas exited; CPU time 34345.052744
06:17:04 (1119120): called boinc_finish(0)

</stderr_txt>
]]>

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