Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:09:48 (40112): wrapper (7.7.26015): starting
04:09:48 (40112): wrapper: running run_atlas (--nthreads 8)
[2025-06-06 04:09:48] Arguments: --nthreads 8
[2025-06-06 04:09:48] Threads: 8
[2025-06-06 04:09:48] Checking for CVMFS
[2025-06-06 04:09:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 04:09:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 04:09:48] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 04:09:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 04:09:48] 2.11.2.0 5091 21235 309688 146847 2 67 13497998 18432000 10560 130560 0 76562146 99.613 58230210 29104 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-06 04:09:48] CVMFS is ok
[2025-06-06 04:09:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 04:09:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 04:09:48] Further information can be found at the LHC@home message board.
[2025-06-06 04:09:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 04:09:48] Checking for apptainer binary...
[2025-06-06 04:09:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 04:09:48] Running /usr/bin/apptainer --version
[2025-06-06 04:09:48] apptainer version 1.3.2-1.el7
[2025-06-06 04:09:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 04:09:49] c-210-41.aglt2.org
[2025-06-06 04:09:49] apptainer works
[2025-06-06 04:09:49] Set ATHENA_PROC_NUMBER=8
[2025-06-06 04:09:49] Set ATHENA_CORE_NUMBER=8
[2025-06-06 04:09:49] Starting ATLAS job with PandaID=6668946936
[2025-06-06 04:09:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 05:46:15]  *** The last 200 lines of the pilot log: ***
[2025-06-06 05:46:15]  filesize=303425
[2025-06-06 05:46:15]  filetype=log
[2025-06-06 05:46:15]  guid=3e054ca6-9883-4779-a62d-a7a71f126781
[2025-06-06 05:46:15]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-06 05:46:15]  is_altstaged=None
[2025-06-06 05:46:15]  is_tar=False
[2025-06-06 05:46:15]  lfn=log.44871837._090778.job.log.tgz.1
[2025-06-06 05:46:15]  mtime=0
[2025-06-06 05:46:15]  protocol_id=None
[2025-06-06 05:46:15]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 05:46:15]  replicas=None
[2025-06-06 05:46:15]  scope=mc23_13p6TeV
[2025-06-06 05:46:15]  status=None
[2025-06-06 05:46:15]  status_code=0
[2025-06-06 05:46:15]  storage_token=
[2025-06-06 05:46:15]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6668946936/log.44871837._090778.job.log.tgz.1
[2025-06-06 05:46:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/45/f1/log.44871837._090778.job.log.tgz.1
[2025-06-06 05:46:15]  workdir=None
[2025-06-06 05:46:15] ]
[2025-06-06 05:46:15] 2025-06-06 09:45:52,503 | INFO     | transferring file log.44871837._090778.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6668946936/log.44871837._090778.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-06 05:46:15] 2025-06-06 09:45:52,503 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6668946936/log.44871837._090778.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._090778.job
[2025-06-06 05:46:15] 2025-06-06 09:45:52,519 | INFO     | adding to output.list: log.44871837._090778.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/45/f1/log.44871837._090778.job.log.tg
[2025-06-06 05:46:15] 2025-06-06 09:45:52,520 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 05:46:15] 2025-06-06 09:45:52,520 | INFO     | summary of transferred files:
[2025-06-06 05:46:15] 2025-06-06 09:45:52,520 | INFO     |  -- lfn=log.44871837._090778.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 05:46:15] 2025-06-06 09:45:52,520 | INFO     | stage-out finished correctly
[2025-06-06 05:46:15] 2025-06-06 09:45:52,571 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 05:46:15] 2025-06-06 09:45:53,303 | INFO     | job 6668946936 has state=finished
[2025-06-06 05:46:15] 2025-06-06 09:45:53,303 | INFO     | preparing for final server update for job 6668946936 in state='finished'
[2025-06-06 05:46:15] 2025-06-06 09:45:53,303 | INFO     | this job has now completed (state=finished)
[2025-06-06 05:46:15] 2025-06-06 09:45:53,303 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 05:46:15] 2025-06-06 09:45:53,303 | INFO     | log transfer has been attempted: DONE
[2025-06-06 05:46:15] 2025-06-06 09:45:53,303 | INFO     | job 6668946936 has finished - writing final server update
[2025-06-06 05:46:15] 2025-06-06 09:45:53,303 | INFO     | total number of processed events: 400 (read)
[2025-06-06 05:46:15] 2025-06-06 09:45:53,306 | INFO     | executing command: lscpu
[2025-06-06 05:46:15] 2025-06-06 09:45:53,337 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 05:46:15] 2025-06-06 09:45:53,966 | INFO     | monitor loop #434: job 0:6668946936 is in state 'finished'
[2025-06-06 05:46:15] 2025-06-06 09:45:53,966 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 05:46:15] 2025-06-06 09:45:54,801 | INFO     | PID=43718 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-06 05:46:15] 2025-06-06 09:45:54,801 | INFO     | .. there are 9 such processes running
[2025-06-06 05:46:15] 2025-06-06 09:45:56,201 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 05:46:15] 2025-06-06 09:45:56,202 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668946936/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 05:46:15] 2025-06-06 09:45:56,202 | INFO     | extracted standard info from prmon json
[2025-06-06 05:46:15] 2025-06-06 09:45:56,202 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 05:46:15] 2025-06-06 09:45:56,202 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 05:46:15] 2025-06-06 09:45:56,203 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 05:46:15] 2025-06-06 09:45:56,203 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 05:46:15] 2025-06-06 09:45:56,204 | INFO     | fitting pss+swap vs Time
[2025-06-06 05:46:15] 2025-06-06 09:45:56,204 | INFO     | sum of square deviations: 204163828.0
[2025-06-06 05:46:15] 2025-06-06 09:45:56,204 | INFO     | sum of deviations: 1629876812.0000002
[2025-06-06 05:46:15] 2025-06-06 09:45:56,204 | INFO     | mean x: 1749200353.0
[2025-06-06 05:46:15] 2025-06-06 09:45:56,204 | INFO     | mean y: 2801209.471264368
[2025-06-06 05:46:15] 2025-06-06 09:45:56,204 | INFO     | -- intersect: -13961381980.20186
[2025-06-06 05:46:15] 2025-06-06 09:45:56,204 | INFO     | intersect: -13961381980.20186
[2025-06-06 05:46:15] 2025-06-06 09:45:56,204 | INFO     | chi2: 0.0005935589191904228
[2025-06-06 05:46:15] 2025-06-06 09:45:56,204 | INFO     | -- intersect: -13961381980.20186
[2025-06-06 05:46:15] 2025-06-06 09:45:56,205 | INFO     | current memory leak: 7.98 B/s (using 87 data points, chi2=0.00)
[2025-06-06 05:46:15] 2025-06-06 09:45:56,205 | INFO     | ..............................
[2025-06-06 05:46:15] 2025-06-06 09:45:56,205 | INFO     | . Timing measurements:
[2025-06-06 05:46:15] 2025-06-06 09:45:56,205 | INFO     | . get job = 0 s
[2025-06-06 05:46:15] 2025-06-06 09:45:56,205 | INFO     | . initial setup = 2 s
[2025-06-06 05:46:15] 2025-06-06 09:45:56,205 | INFO     | . payload setup = 6 s
[2025-06-06 05:46:15] 2025-06-06 09:45:56,205 | INFO     | . stage-in = 0 s
[2025-06-06 05:46:15] 2025-06-06 09:45:56,205 | INFO     | . payload execution = 5728 s
[2025-06-06 05:46:15] 2025-06-06 09:45:56,205 | INFO     | . stage-out = 0 s
[2025-06-06 05:46:15] 2025-06-06 09:45:56,205 | INFO     | . log creation = 0 s
[2025-06-06 05:46:15] 2025-06-06 09:45:56,205 | INFO     | ..............................
[2025-06-06 05:46:15] 2025-06-06 09:45:56,613 | INFO     | 
[2025-06-06 05:46:15] 2025-06-06 09:45:56,613 | INFO     | job summary report
[2025-06-06 05:46:15] 2025-06-06 09:45:56,613 | INFO     | --------------------------------------------------
[2025-06-06 05:46:15] 2025-06-06 09:45:56,613 | INFO     | PanDA job id: 6668946936
[2025-06-06 05:46:15] 2025-06-06 09:45:56,614 | INFO     | task id: 44871837
[2025-06-06 05:46:15] 2025-06-06 09:45:56,614 | INFO     | errors: (none)
[2025-06-06 05:46:15] 2025-06-06 09:45:56,614 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 05:46:15] 2025-06-06 09:45:56,614 | INFO     | pilot state: finished 
[2025-06-06 05:46:15] 2025-06-06 09:45:56,614 | INFO     | transexitcode: 0
[2025-06-06 05:46:15] 2025-06-06 09:45:56,614 | INFO     | exeerrorcode: 0
[2025-06-06 05:46:15] 2025-06-06 09:45:56,614 | INFO     | exeerrordiag: 
[2025-06-06 05:46:15] 2025-06-06 09:45:56,614 | INFO     | exitcode: 0
[2025-06-06 05:46:15] 2025-06-06 09:45:56,614 | INFO     | exitmsg: OK
[2025-06-06 05:46:15] 2025-06-06 09:45:56,614 | INFO     | cpuconsumptiontime: 40910 s
[2025-06-06 05:46:15] 2025-06-06 09:45:56,614 | INFO     | nevents: 400
[2025-06-06 05:46:15] 2025-06-06 09:45:56,614 | INFO     | neventsw: 0
[2025-06-06 05:46:15] 2025-06-06 09:45:56,614 | INFO     | pid: 51258
[2025-06-06 05:46:15] 2025-06-06 09:45:56,614 | INFO     | pgrp: 51258
[2025-06-06 05:46:15] 2025-06-06 09:45:56,614 | INFO     | corecount: 8
[2025-06-06 05:46:15] 2025-06-06 09:45:56,614 | INFO     | event service: False
[2025-06-06 05:46:15] 2025-06-06 09:45:56,614 | INFO     | sizes: {0: 2397163, 1: 2397418, 4: 2397624, 12: 2397652, 5739: 2433208, 5740: 2433208, 5743: 2433506}
[2025-06-06 05:46:15] 2025-06-06 09:45:56,614 | INFO     | --------------------------------------------------
[2025-06-06 05:46:15] 2025-06-06 09:45:56,614 | INFO     | 
[2025-06-06 05:46:15] 2025-06-06 09:45:56,614 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 05:46:15] 2025-06-06 09:45:56,630 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 05:46:15] 2025-06-06 09:45:56,630 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 05:46:15] 2025-06-06 09:45:56,630 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 05:46:15] 2025-06-06 09:45:56,631 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 05:46:15] 2025-06-06 09:45:56,631 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 05:46:15] 2025-06-06 09:45:56,631 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 05:46:15] 2025-06-06 09:45:56,631 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 05:46:15] 2025-06-06 09:45:56,631 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 05:46:15] 2025-06-06 09:45:56,631 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 05:46:15] 2025-06-06 09:45:56,631 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 05:46:15] 2025-06-06 09:45:56,631 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 05:46:15] 2025-06-06 09:45:56,631 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 05:46:15] 2025-06-06 09:45:56,631 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 05:46:15] 2025-06-06 09:45:56,631 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 05:46:15] 2025-06-06 09:45:56,631 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 05:46:15] 2025-06-06 09:45:56,631 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 05:46:15] 2025-06-06 09:45:56,631 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 05:46:15] 2025-06-06 09:45:56,631 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 05:46:15] 2025-06-06 09:45:56,631 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 05:46:15] 2025-06-06 09:45:56,632 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 05:46:15] 2025-06-06 09:45:56,632 | INFO     | job 6668946936 has completed (purged errors)
[2025-06-06 05:46:15] 2025-06-06 09:45:56,632 | INFO     | overall cleanup function is called
[2025-06-06 05:46:15] 2025-06-06 09:45:57,640 | INFO     | --- collectZombieJob: --- 10, [51258]
[2025-06-06 05:46:15] 2025-06-06 09:45:57,640 | INFO     | zombie collector waiting for pid 51258
[2025-06-06 05:46:15] 2025-06-06 09:45:57,640 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 05:46:15] 2025-06-06 09:45:57,640 | INFO     | collected zombie processes
[2025-06-06 05:46:15] 2025-06-06 09:45:57,640 | INFO     | will attempt to kill all subprocesses of pid=51258
[2025-06-06 05:46:15] 2025-06-06 09:45:57,837 | INFO     | process IDs to be killed: [51258] (in reverse order)
[2025-06-06 05:46:15] 2025-06-06 09:45:57,883 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 05:46:15] 2025-06-06 09:45:57,883 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 05:46:15] 2025-06-06 09:45:57,887 | INFO     | did not find any defunct processes belonging to 51258
[2025-06-06 05:46:15] 2025-06-06 09:45:57,890 | INFO     | did not find any defunct processes belonging to 51258
[2025-06-06 05:46:15] 2025-06-06 09:45:57,890 | INFO     | ready for new job
[2025-06-06 05:46:15] 2025-06-06 09:45:57,890 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 05:46:15] 2025-06-06 09:45:57,891 | INFO     | **************************************
[2025-06-06 05:46:15] 2025-06-06 09:45:57,891 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 05:46:15] 2025-06-06 09:45:57,891 | INFO     | **************************************
[2025-06-06 05:46:15] 2025-06-06 09:45:57,891 | INFO     | 
[2025-06-06 05:46:15] 2025-06-06 09:45:57,893 | INFO     | architecture information:
[2025-06-06 05:46:15] 2025-06-06 09:45:57,894 | INFO     | executing command: cat /etc/os-release
[2025-06-06 05:46:15] 2025-06-06 09:45:57,901 | INFO     | cat /etc/os-release:
[2025-06-06 05:46:15] NAME="CentOS Linux"
[2025-06-06 05:46:15] VERSION="7 (Core)"
[2025-06-06 05:46:15] ID="centos"
[2025-06-06 05:46:15] ID_LIKE="rhel fedora"
[2025-06-06 05:46:15] VERSION_ID="7"
[2025-06-06 05:46:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 05:46:15] ANSI_COLOR="0;31"
[2025-06-06 05:46:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 05:46:15] HOME_URL="https://www.centos.org/"
[2025-06-06 05:46:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 05:46:15] 
[2025-06-06 05:46:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 05:46:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 05:46:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 05:46:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 05:46:15] 
[2025-06-06 05:46:15] 2025-06-06 09:45:57,901 | INFO     | **************************************
[2025-06-06 05:46:15] 2025-06-06 09:45:58,404 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 05:46:15] 2025-06-06 09:45:58,419 | INFO     | sufficient remaining disk space (77253836800 B)
[2025-06-06 05:46:15] 2025-06-06 09:45:58,420 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 05:46:15] 2025-06-06 09:45:58,420 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 05:46:15] 2025-06-06 09:45:58,420 | INFO     | update_server=False
[2025-06-06 05:46:15] 2025-06-06 09:45:58,420 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 05:46:15] 2025-06-06 09:45:58,420 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 05:46:15] 2025-06-06 09:45:58,421 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 05:46:15] 2025-06-06 09:45:58,421 | INFO     | aborting loop
[2025-06-06 05:46:15] 2025-06-06 09:45:58,625 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 05:46:15] 2025-06-06 09:45:58,808 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 05:46:15] 2025-06-06 09:45:58,808 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 05:46:15] 2025-06-06 09:45:58,808 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 05:46:15] 2025-06-06 09:45:59,005 | INFO     | all data control threads have been joined
[2025-06-06 05:46:15] 2025-06-06 09:45:59,422 | INFO     | [job] job monitor thread has finished
[2025-06-06 05:46:15] 2025-06-06 09:45:59,425 | INFO     | [job] retrieve thread has finished
[2025-06-06 05:46:15] 2025-06-06 09:45:59,506 | INFO     | all job control threads have been joined
[2025-06-06 05:46:15] 2025-06-06 09:45:59,516 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 05:46:15] 2025-06-06 09:45:59,633 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 05:46:15] 2025-06-06 09:45:59,663 | INFO     | [payload] failed_post thread has finished
[2025-06-06 05:46:15] 2025-06-06 09:45:59,754 | INFO     | [job] validate thread has finished
[2025-06-06 05:46:15] 2025-06-06 09:45:59,774 | INFO     | all payload control threads have been joined
[2025-06-06 05:46:15] 2025-06-06 09:46:00,010 | INFO     | [data] control thread has finished
[2025-06-06 05:46:15] 2025-06-06 09:46:00,426 | INFO     | [data] copytool_out thread has finished
[2025-06-06 05:46:15] 2025-06-06 09:46:00,462 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 05:46:15] 2025-06-06 09:46:00,511 | INFO     | [job] control thread has finished
[2025-06-06 05:46:15] 2025-06-06 09:46:00,583 | INFO     | [data] copytool_in thread has finished
[2025-06-06 05:46:15] 2025-06-06 09:46:00,779 | INFO     | [payload] control thread has finished
[2025-06-06 05:46:15] 2025-06-06 09:46:01,019 | INFO     | [payload] validate_post thread has finished
[2025-06-06 05:46:15] 2025-06-06 09:46:01,268 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 05:46:15] 2025-06-06 09:46:02,273 | INFO     | [job] queue monitor thread has finished
[2025-06-06 05:46:15] 2025-06-06 09:46:02,627 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 05:46:15] 2025-06-06 09:46:09,283 | INFO     | job.realtimelogging is not enabled
[2025-06-06 05:46:15] 2025-06-06 09:46:10,288 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 05:46:15] 2025-06-06 09:46:10,337 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139627137271616)>', '<ExcThread(monitor, started 139626702436096)>']
[2025-06-06 05:46:15] 2025-06-06 09:46:10,862 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 05:46:15] 2025-06-06 09:46:10,862 | INFO     | [monitor] control thread has ended
[2025-06-06 05:46:15] 2025-06-06 09:46:15,363 | INFO     | all workflow threads have been joined
[2025-06-06 05:46:15] 2025-06-06 09:46:15,363 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 05:46:15] 2025-06-06 09:46:15,363 | INFO     | traces error code: 0
[2025-06-06 05:46:15] 2025-06-06 09:46:15,363 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 05:46:15] 2025-06-06 09:46:15,463 [wrapper] ==== pilot stdout END ====
[2025-06-06 05:46:15] 2025-06-06 09:46:15,466 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 05:46:15] 2025-06-06 09:46:15,469 [wrapper] pilotpid: 43718
[2025-06-06 05:46:15] 2025-06-06 09:46:15,471 [wrapper] Pilot exit status: 0
[2025-06-06 05:46:15] 2025-06-06 09:46:15,482 [wrapper] pandaids: 6668946936
[2025-06-06 05:46:15] 2025-06-06 09:46:15,524 [wrapper] cleanup supervisor_pilot 12002 43719
[2025-06-06 05:46:15] 2025-06-06 09:46:15,526 [wrapper] Test setup, not cleaning
[2025-06-06 05:46:15] 2025-06-06 09:46:15,528 [wrapper] apfmon messages muted
[2025-06-06 05:46:15] 2025-06-06 09:46:15,529 [wrapper] ==== wrapper stdout END ====
[2025-06-06 05:46:15] 2025-06-06 09:46:15,531 [wrapper] ==== wrapper stderr END ====
[2025-06-06 05:46:15]  *** Error codes and diagnostics ***
[2025-06-06 05:46:15]     "exeErrorCode": 0,
[2025-06-06 05:46:15]     "exeErrorDiag": "",
[2025-06-06 05:46:15]     "pilotErrorCode": 0,
[2025-06-06 05:46:15]     "pilotErrorDiag": "",
[2025-06-06 05:46:15]  *** Listing of results directory ***
[2025-06-06 05:46:15] total 416028
[2025-06-06 05:46:15] -rw-r--r-- 1 boincer umatlas    495897 May 28 17:08 pilot3.tar.gz
[2025-06-06 05:46:15] -rwx------ 1 boincer umatlas     37140 May 28 17:38 runpilot2-wrapper.sh
[2025-06-06 05:46:15] -rw-r--r-- 1 boincer umatlas      5111 May 28 17:38 queuedata.json
[2025-06-06 05:46:15] -rw-r--r-- 1 boincer umatlas       100 Jun  6 04:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 05:46:15] -rwxr-xr-x 1 boincer umatlas      7986 Jun  6 04:09 run_atlas
[2025-06-06 05:46:15] -rw-r--r-- 1 boincer umatlas       105 Jun  6 04:09 job.xml
[2025-06-06 05:46:15] -rw-r--r-- 2 boincer umatlas 223264943 Jun  6 04:09 EVNT.44871834._003532.pool.root.1
[2025-06-06 05:46:15] -rw-r--r-- 2 boincer umatlas     15093 Jun  6 04:09 start_atlas.sh
[2025-06-06 05:46:15] drwxrwx--x 2 boincer umatlas      4096 Jun  6 04:09 shared
[2025-06-06 05:46:15] -rw-r--r-- 2 boincer umatlas    508872 Jun  6 04:09 input.tar.gz
[2025-06-06 05:46:15] -rw-r--r-- 1 boincer umatlas         0 Jun  6 04:09 boinc_lockfile
[2025-06-06 05:46:15] -rw-r--r-- 1 boincer umatlas      2558 Jun  6 04:09 pandaJob.out
[2025-06-06 05:46:15] -rw------- 1 boincer umatlas    987967 Jun  6 04:09 agis_schedconf.cvmfs.json
[2025-06-06 05:46:15] -rw------- 1 boincer umatlas   1598969 Jun  6 04:09 agis_ddmendpoints.agis.ALL.json
[2025-06-06 05:46:15] drwx------ 4 boincer umatlas      4096 Jun  6 04:09 pilot3
[2025-06-06 05:46:15] -rw-r--r-- 1 boincer umatlas      6252 Jun  6 05:38 init_data.xml
[2025-06-06 05:46:15] -rw------- 1 boincer umatlas 197182288 Jun  6 05:45 HITS.44871837._090778.pool.root.1
[2025-06-06 05:46:15] -rw-r--r-- 1 boincer umatlas       529 Jun  6 05:45 boinc_task_state.xml
[2025-06-06 05:46:15] -rw------- 1 boincer umatlas      1068 Jun  6 05:45 memory_monitor_summary.json
[2025-06-06 05:46:15] -rw------- 1 boincer umatlas    303425 Jun  6 05:45 log.44871837._090778.job.log.tgz.1
[2025-06-06 05:46:15] -rw------- 1 boincer umatlas      7737 Jun  6 05:45 heartbeat.json
[2025-06-06 05:46:15] -rw------- 1 boincer umatlas        95 Jun  6 05:45 pilot_heartbeat.json
[2025-06-06 05:46:15] -rw-r--r-- 1 boincer umatlas        27 Jun  6 05:46 wrapper_checkpoint.txt
[2025-06-06 05:46:15] -rw-r--r-- 1 boincer umatlas      8192 Jun  6 05:46 boinc_mmap_file
[2025-06-06 05:46:15] -rw------- 1 boincer umatlas      4425 Jun  6 05:46 pilotlog.txt
[2025-06-06 05:46:15] -rw------- 1 boincer umatlas    561756 Jun  6 05:46 log.44871837._090778.job.log.1
[2025-06-06 05:46:15] -rw------- 1 boincer umatlas       357 Jun  6 05:46 output.list
[2025-06-06 05:46:15] -rw-r--r-- 1 boincer umatlas       620 Jun  6 05:46 runtime_log
[2025-06-06 05:46:15] -rw------- 1 boincer umatlas    880640 Jun  6 05:46 result.tar.gz
[2025-06-06 05:46:15] -rw------- 1 boincer umatlas       659 Jun  6 05:46 ZusMDmDfde7n9Rq4apOajLDm4fhM0noT9bVof3QYDmsBUKDmudTdmm.diag
[2025-06-06 05:46:15] -rw-r--r-- 1 boincer umatlas      8659 Jun  6 05:46 runtime_log.err
[2025-06-06 05:46:15] -rw-r--r-- 1 boincer umatlas     21134 Jun  6 05:46 stderr.txt
[2025-06-06 05:46:15] HITS file was successfully produced:
[2025-06-06 05:46:15] -rw------- 1 boincer umatlas 197182288 Jun  6 05:45 shared/HITS.pool.root.1
[2025-06-06 05:46:15]  *** Contents of shared directory: ***
[2025-06-06 05:46:15] total 411980
[2025-06-06 05:46:15] -rw-r--r-- 2 boincer umatlas 223264943 Jun  6 04:09 ATLAS.root_0
[2025-06-06 05:46:15] -rw-r--r-- 2 boincer umatlas     15093 Jun  6 04:09 start_atlas.sh
[2025-06-06 05:46:15] -rw-r--r-- 2 boincer umatlas    508872 Jun  6 04:09 input.tar.gz
[2025-06-06 05:46:15] -rw------- 1 boincer umatlas 197182288 Jun  6 05:45 HITS.pool.root.1
[2025-06-06 05:46:15] -rw------- 1 boincer umatlas    880640 Jun  6 05:46 result.tar.gz
05:46:17 (40112): run_atlas exited; CPU time 40607.723387
05:46:17 (40112): called boinc_finish(0)

</stderr_txt>
]]>

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