Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:06:05 (4966): wrapper (7.7.26015): starting
10:06:05 (4966): wrapper: running run_atlas (--nthreads 8)
[2025-06-06 10:06:05] Arguments: --nthreads 8
[2025-06-06 10:06:05] Threads: 8
[2025-06-06 10:06:05] Checking for CVMFS
[2025-06-06 10:06:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 10:06:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 10:06:09] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 10:06:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 10:06:10] 2.11.2.0 32479 35826 73036 146847 0 219 19782593 25165824 3600 130560 0 18942768 99.749 24203321 2414 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-06 10:06:10] CVMFS is ok
[2025-06-06 10:06:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 10:06:10] Checking for apptainer binary...
[2025-06-06 10:06:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 10:06:10] Running /usr/bin/apptainer --version
[2025-06-06 10:06:11] apptainer version 1.3.2-1.el7
[2025-06-06 10:06:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 10:07:26] cg-vwn301.simple-grid.lan
[2025-06-06 10:07:26] apptainer works
[2025-06-06 10:07:26] Set ATHENA_PROC_NUMBER=8
[2025-06-06 10:07:26] Set ATHENA_CORE_NUMBER=8
[2025-06-06 10:07:26] Starting ATLAS job with PandaID=6669237582
[2025-06-06 10:07:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 15:29:24]  *** The last 200 lines of the pilot log: ***
[2025-06-06 15:29:24] 2025-06-06 13:24:18,275 | INFO     | extracted standard info from prmon json
[2025-06-06 15:29:24] 2025-06-06 13:24:18,275 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 15:29:24] 2025-06-06 13:24:18,276 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 15:29:24] 2025-06-06 13:24:18,276 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 15:29:24] 2025-06-06 13:24:18,276 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 15:29:24] 2025-06-06 13:24:18,282 | INFO     | fitting pss+swap vs Time
[2025-06-06 15:29:24] 2025-06-06 13:24:18,285 | INFO     | sum of square deviations: 8372156975.0
[2025-06-06 15:29:24] 2025-06-06 13:24:18,289 | INFO     | sum of deviations: -42287640244.0
[2025-06-06 15:29:24] 2025-06-06 13:24:18,290 | INFO     | mean x: 1749206988.5
[2025-06-06 15:29:24] 2025-06-06 13:24:18,290 | INFO     | mean y: 2548045.8066666666
[2025-06-06 15:29:24] 2025-06-06 13:24:18,290 | INFO     | -- intersect: 8837766504.187119
[2025-06-06 15:29:24] 2025-06-06 13:24:18,290 | INFO     | intersect: 8837766504.187119
[2025-06-06 15:29:24] 2025-06-06 13:24:18,290 | INFO     | chi2: 6.26032685789747
[2025-06-06 15:29:24] 2025-06-06 13:24:18,291 | INFO     | sum of square deviations: 7960484140.0
[2025-06-06 15:29:24] 2025-06-06 13:24:18,297 | INFO     | sum of deviations: -19753515502.999992
[2025-06-06 15:29:24] 2025-06-06 13:24:18,298 | INFO     | mean x: 1749206836.0
[2025-06-06 15:29:24] 2025-06-06 13:24:18,298 | INFO     | mean y: 2556293.6305084745
[2025-06-06 15:29:24] 2025-06-06 13:24:18,298 | INFO     | -- intersect: 4343119473.608097
[2025-06-06 15:29:24] 2025-06-06 13:24:18,298 | INFO     | intersect: 4343119473.608097
[2025-06-06 15:29:24] 2025-06-06 13:24:18,298 | INFO     | chi2: 5.523819665662182
[2025-06-06 15:29:24] 2025-06-06 13:24:18,298 | INFO     | current chi2=5.523819665662182 (change=11.764676333252089 %)
[2025-06-06 15:29:24] 2025-06-06 13:24:18,299 | INFO     | right removable region: 294
[2025-06-06 15:29:24] 2025-06-06 13:24:18,299 | INFO     | sum of square deviations: 7960484140.0
[2025-06-06 15:29:24] 2025-06-06 13:24:18,302 | INFO     | sum of deviations: -147495015270.0
[2025-06-06 15:29:24] 2025-06-06 13:24:18,302 | INFO     | mean x: 1749207141.0
[2025-06-06 15:29:24] 2025-06-06 13:24:18,302 | INFO     | mean y: 2586986.6033898303
[2025-06-06 15:29:24] 2025-06-06 13:24:18,302 | INFO     | -- intersect: 32412592387.630177
[2025-06-06 15:29:24] 2025-06-06 13:24:18,304 | INFO     | intersect: 32412592387.630177
[2025-06-06 15:29:24] 2025-06-06 13:24:18,306 | INFO     | chi2: 1.7927248586760962
[2025-06-06 15:29:24] 2025-06-06 13:24:18,306 | INFO     | current chi2=1.7927248586760962 (change=71.36371791171648 %)
[2025-06-06 15:29:24] 2025-06-06 13:24:18,306 | INFO     | sum of square deviations: 7562532492.5
[2025-06-06 15:29:24] 2025-06-06 13:24:18,309 | INFO     | sum of deviations: -180557629906.00003
[2025-06-06 15:29:24] 2025-06-06 13:24:18,309 | INFO     | mean x: 1749207293.5
[2025-06-06 15:29:24] 2025-06-06 13:24:18,309 | INFO     | mean y: 2599584.924137931
[2025-06-06 15:29:24] 2025-06-06 13:24:18,309 | INFO     | -- intersect: 41765424860.96364
[2025-06-06 15:29:24] 2025-06-06 13:24:18,310 | INFO     | intersect: 41765424860.96364
[2025-06-06 15:29:24] 2025-06-06 13:24:18,310 | INFO     | chi2: 1.099461079567779
[2025-06-06 15:29:24] 2025-06-06 13:24:18,310 | INFO     | current chi2=1.099461079567779 (change=38.67095253090223 %)
[2025-06-06 15:29:24] 2025-06-06 13:24:18,311 | INFO     | sum of square deviations: 7178069470.0
[2025-06-06 15:29:24] 2025-06-06 13:24:18,317 | INFO     | sum of deviations: -181176907517.99997
[2025-06-06 15:29:24] 2025-06-06 13:24:18,317 | INFO     | mean x: 1749207446.0
[2025-06-06 15:29:24] 2025-06-06 13:24:18,317 | INFO     | mean y: 2599809.452631579
[2025-06-06 15:29:24] 2025-06-06 13:24:18,317 | INFO     | -- intersect: 44153188905.62349
[2025-06-06 15:29:24] 2025-06-06 13:24:18,321 | INFO     | intersect: 44153188905.62349
[2025-06-06 15:29:24] 2025-06-06 13:24:18,321 | INFO     | chi2: 1.059036176677831
[2025-06-06 15:29:24] 2025-06-06 13:24:18,321 | INFO     | current chi2=1.059036176677831 (change=3.6767925341968466 %)
[2025-06-06 15:29:24] 2025-06-06 13:24:18,322 | INFO     | left removable region: 30
[2025-06-06 15:29:24] 2025-06-06 13:24:18,322 | INFO     | sum of square deviations: 5705372090.0
[2025-06-06 15:29:24] 2025-06-06 13:24:18,324 | INFO     | sum of deviations: -138466717894.99994
[2025-06-06 15:29:24] 2025-06-06 13:24:18,324 | INFO     | mean x: 1749207720.5
[2025-06-06 15:29:24] 2025-06-06 13:24:18,325 | INFO     | mean y: 2601681.553030303
[2025-06-06 15:29:24] 2025-06-06 13:24:18,325 | INFO     | -- intersect: 42455056692.98935
[2025-06-06 15:29:24] 2025-06-06 13:24:18,325 | INFO     | intersect: 42455056692.98935
[2025-06-06 15:29:24] 2025-06-06 13:24:18,325 | INFO     | chi2: 0.25807424979728655
[2025-06-06 15:29:24] 2025-06-06 13:24:18,325 | INFO     | -- intersect: 42455056692.98935
[2025-06-06 15:29:24] 2025-06-06 13:24:18,325 | INFO     | current memory leak: -24.27 B/s (using 264 data points, chi2=0.26)
[2025-06-06 15:29:24] 2025-06-06 13:24:18,326 | INFO     | ..............................
[2025-06-06 15:29:24] 2025-06-06 13:24:18,327 | INFO     | . Timing measurements:
[2025-06-06 15:29:24] 2025-06-06 13:24:18,327 | INFO     | . get job = 0 s
[2025-06-06 15:29:24] 2025-06-06 13:24:18,327 | INFO     | . initial setup = 3 s
[2025-06-06 15:29:24] 2025-06-06 13:24:18,327 | INFO     | . payload setup = 138 s
[2025-06-06 15:29:24] 2025-06-06 13:24:18,327 | INFO     | . stage-in = 0 s
[2025-06-06 15:29:24] 2025-06-06 13:24:18,327 | INFO     | . payload execution = 18426 s
[2025-06-06 15:29:24] 2025-06-06 13:24:18,327 | INFO     | . stage-out = 4 s
[2025-06-06 15:29:24] 2025-06-06 13:24:18,327 | INFO     | . log creation = 1 s
[2025-06-06 15:29:24] 2025-06-06 13:24:18,327 | INFO     | ..............................
[2025-06-06 15:29:24] 2025-06-06 13:24:18,561 | INFO     | 
[2025-06-06 15:29:24] 2025-06-06 13:24:18,561 | INFO     | job summary report
[2025-06-06 15:29:24] 2025-06-06 13:24:18,561 | INFO     | --------------------------------------------------
[2025-06-06 15:29:24] 2025-06-06 13:24:18,561 | INFO     | PanDA job id: 6669237582
[2025-06-06 15:29:24] 2025-06-06 13:24:18,561 | INFO     | task id: 44871837
[2025-06-06 15:29:24] 2025-06-06 13:24:18,561 | INFO     | errors: (none)
[2025-06-06 15:29:24] 2025-06-06 13:24:18,561 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 15:29:24] 2025-06-06 13:24:18,561 | INFO     | pilot state: finished 
[2025-06-06 15:29:24] 2025-06-06 13:24:18,561 | INFO     | transexitcode: 0
[2025-06-06 15:29:24] 2025-06-06 13:24:18,562 | INFO     | exeerrorcode: 0
[2025-06-06 15:29:24] 2025-06-06 13:24:18,562 | INFO     | exeerrordiag: 
[2025-06-06 15:29:24] 2025-06-06 13:24:18,562 | INFO     | exitcode: 0
[2025-06-06 15:29:24] 2025-06-06 13:24:18,562 | INFO     | exitmsg: OK
[2025-06-06 15:29:24] 2025-06-06 13:24:18,562 | INFO     | cpuconsumptiontime: 69409 s
[2025-06-06 15:29:24] 2025-06-06 13:24:18,562 | INFO     | nevents: 400
[2025-06-06 15:29:24] 2025-06-06 13:24:18,562 | INFO     | neventsw: 0
[2025-06-06 15:29:24] 2025-06-06 13:24:18,562 | INFO     | pid: 19708
[2025-06-06 15:29:24] 2025-06-06 13:24:18,562 | INFO     | pgrp: 19708
[2025-06-06 15:29:24] 2025-06-06 13:24:18,562 | INFO     | corecount: 8
[2025-06-06 15:29:24] 2025-06-06 13:24:18,562 | INFO     | event service: False
[2025-06-06 15:29:24] 2025-06-06 13:24:18,562 | INFO     | sizes: {0: 2397221, 1: 2397420, 12: 2397420, 23: 2397448, 33: 2397476, 44: 2397532, 55: 2397688, 66: 2397716, 76: 2397744, 87: 2365611, 88: 2398034, 98: 2398342, 1
[2025-06-06 15:29:24] 2025-06-06 13:24:18,562 | INFO     | --------------------------------------------------
[2025-06-06 15:29:24] 2025-06-06 13:24:18,562 | INFO     | 
[2025-06-06 15:29:24] 2025-06-06 13:24:18,563 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-06-06 15:29:24] 2025-06-06 13:24:19,032 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 15:29:24] 2025-06-06 13:24:19,032 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 15:29:24] 2025-06-06 13:24:19,032 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 15:29:24] 2025-06-06 13:24:19,033 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 15:29:24] 2025-06-06 13:24:19,033 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 15:29:24] 2025-06-06 13:24:19,033 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 15:29:24] 2025-06-06 13:24:19,033 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 15:29:24] 2025-06-06 13:24:19,033 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 15:29:24] 2025-06-06 13:24:19,033 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 15:29:24] 2025-06-06 13:24:19,033 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 15:29:24] 2025-06-06 13:24:19,033 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 15:29:24] 2025-06-06 13:24:19,033 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 15:29:24] 2025-06-06 13:24:19,033 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 15:29:24] 2025-06-06 13:24:19,033 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 15:29:24] 2025-06-06 13:24:19,034 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 15:29:24] 2025-06-06 13:24:19,034 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 15:29:24] 2025-06-06 13:24:19,034 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 15:29:24] 2025-06-06 13:24:19,034 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 15:29:24] 2025-06-06 13:24:19,034 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 15:29:24] 2025-06-06 13:24:19,034 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 15:29:24] 2025-06-06 13:24:19,034 | INFO     | job 6669237582 has completed (purged errors)
[2025-06-06 15:29:24] 2025-06-06 13:24:19,034 | INFO     | overall cleanup function is called
[2025-06-06 15:29:24] 2025-06-06 13:24:20,042 | INFO     | --- collectZombieJob: --- 10, [19708]
[2025-06-06 15:29:24] 2025-06-06 13:24:20,043 | INFO     | zombie collector waiting for pid 19708
[2025-06-06 15:29:24] 2025-06-06 13:24:20,043 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 15:29:24] 2025-06-06 13:24:20,043 | INFO     | collected zombie processes
[2025-06-06 15:29:24] 2025-06-06 13:24:20,043 | INFO     | will attempt to kill all subprocesses of pid=19708
[2025-06-06 15:29:24] 2025-06-06 13:24:20,182 | INFO     | process IDs to be killed: [19708] (in reverse order)
[2025-06-06 15:29:24] 2025-06-06 13:24:20,933 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 15:29:24] 2025-06-06 13:24:20,933 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 15:29:24] 2025-06-06 13:24:20,936 | INFO     | did not find any defunct processes belonging to 19708
[2025-06-06 15:29:24] 2025-06-06 13:24:20,939 | INFO     | did not find any defunct processes belonging to 19708
[2025-06-06 15:29:24] 2025-06-06 13:24:20,939 | INFO     | ready for new job
[2025-06-06 15:29:24] 2025-06-06 13:24:20,939 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 15:29:24] 2025-06-06 13:24:20,942 | INFO     | **************************************
[2025-06-06 15:29:24] 2025-06-06 13:24:20,942 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 15:29:24] 2025-06-06 13:24:20,942 | INFO     | **************************************
[2025-06-06 15:29:24] 2025-06-06 13:24:20,942 | INFO     | 
[2025-06-06 15:29:24] 2025-06-06 13:24:20,943 | INFO     | pilot is running in a VM
[2025-06-06 15:29:24] 2025-06-06 13:24:20,943 | INFO     | architecture information:
[2025-06-06 15:29:24] 2025-06-06 13:24:20,945 | INFO     | executing command: cat /etc/os-release
[2025-06-06 15:29:24] 2025-06-06 13:24:21,199 | INFO     | cat /etc/os-release:
[2025-06-06 15:29:24] NAME="CentOS Linux"
[2025-06-06 15:29:24] VERSION="7 (Core)"
[2025-06-06 15:29:24] ID="centos"
[2025-06-06 15:29:24] ID_LIKE="rhel fedora"
[2025-06-06 15:29:24] VERSION_ID="7"
[2025-06-06 15:29:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 15:29:24] ANSI_COLOR="0;31"
[2025-06-06 15:29:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 15:29:24] HOME_URL="https://www.centos.org/"
[2025-06-06 15:29:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 15:29:24] 
[2025-06-06 15:29:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 15:29:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 15:29:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 15:29:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 15:29:24] 
[2025-06-06 15:29:24] 2025-06-06 13:24:21,199 | INFO     | **************************************
[2025-06-06 15:29:24] 2025-06-06 13:24:21,703 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-06-06 15:29:24] 2025-06-06 13:24:21,857 | INFO     | sufficient remaining disk space (495225667584 B)
[2025-06-06 15:29:24] 2025-06-06 13:24:21,858 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 15:29:24] 2025-06-06 13:24:21,858 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 15:29:24] 2025-06-06 13:24:21,858 | INFO     | update_server=False
[2025-06-06 15:29:24] 2025-06-06 13:24:21,858 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 15:29:24] 2025-06-06 13:24:21,859 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 15:29:24] 2025-06-06 13:24:21,859 | INFO     | aborting loop
[2025-06-06 15:29:24] 2025-06-06 13:24:21,859 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 15:29:24] 2025-06-06 13:24:21,860 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 15:29:24] 2025-06-06 13:24:21,860 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 15:29:24] 2025-06-06 13:24:21,860 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 15:29:24] 2025-06-06 13:24:22,391 | INFO     | all data control threads have been joined
[2025-06-06 15:29:24] 2025-06-06 13:24:22,704 | INFO     | all payload control threads have been joined
[2025-06-06 15:29:24] 2025-06-06 13:24:22,865 | INFO     | [job] retrieve thread has finished
[2025-06-06 15:29:24] 2025-06-06 13:24:22,865 | INFO     | [job] job monitor thread has finished
[2025-06-06 15:29:24] 2025-06-06 13:24:23,020 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 15:29:24] 2025-06-06 13:24:23,134 | INFO     | all job control threads have been joined
[2025-06-06 15:29:24] 2025-06-06 13:24:23,207 | INFO     | [payload] validate_post thread has finished
[2025-06-06 15:29:24] 2025-06-06 13:24:23,351 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 15:29:24] 2025-06-06 13:24:23,397 | INFO     | [data] control thread has finished
[2025-06-06 15:29:24] 2025-06-06 13:24:23,480 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 15:29:24] 2025-06-06 13:24:23,592 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 15:29:24] 2025-06-06 13:24:23,601 | INFO     | [job] validate thread has finished
[2025-06-06 15:29:24] 2025-06-06 13:24:23,657 | INFO     | [data] copytool_in thread has finished
[2025-06-06 15:29:24] 2025-06-06 13:24:23,711 | INFO     | [payload] control thread has finished
[2025-06-06 15:29:24] 2025-06-06 13:24:24,140 | INFO     | [job] control thread has finished
[2025-06-06 15:29:24] 2025-06-06 13:24:24,286 | INFO     | [payload] failed_post thread has finished
[2025-06-06 15:29:24] 2025-06-06 13:24:24,313 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 15:29:24] 2025-06-06 13:24:24,360 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 15:29:24] 2025-06-06 13:24:24,485 | INFO     | [job] queue monitor thread has finished
[2025-06-06 15:29:24] 2025-06-06 13:24:25,280 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 15:29:24] 2025-06-06 13:24:25,359 | INFO     | [data] copytool_out thread has finished
[2025-06-06 15:29:24] 2025-06-06 13:24:29,290 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 15:29:24] 2025-06-06 13:24:30,628 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140694794942272)>', '<ExcThread(monitor, started 140694127634176)>']
[2025-06-06 15:29:24] 2025-06-06 13:24:30,917 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 15:29:24] 2025-06-06 13:24:30,918 | INFO     | [monitor] control thread has ended
[2025-06-06 15:29:24] 2025-06-06 13:24:35,653 | INFO     | all workflow threads have been joined
[2025-06-06 15:29:24] 2025-06-06 13:24:35,654 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 15:29:24] 2025-06-06 13:24:35,654 | INFO     | traces error code: 0
[2025-06-06 15:29:24] 2025-06-06 13:24:35,654 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 15:29:24] 2025-06-06 13:24:35,927 [wrapper] ==== pilot stdout END ====
[2025-06-06 15:29:24] 2025-06-06 13:24:36,001 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 15:29:24] 2025-06-06 13:24:36,064 [wrapper] pilotpid: 11057
[2025-06-06 15:29:24] 2025-06-06 13:24:36,120 [wrapper] Pilot exit status: 0
[2025-06-06 15:29:24] 2025-06-06 13:24:36,601 [wrapper] pandaids: 6669237582
[2025-06-06 15:29:24] 2025-06-06 13:24:37,543 [wrapper] cleanup supervisor_pilot 30656 11058
[2025-06-06 15:29:24] 2025-06-06 13:24:37,580 [wrapper] Test setup, not cleaning
[2025-06-06 15:29:24] 2025-06-06 13:24:37,654 [wrapper] apfmon messages muted
[2025-06-06 15:29:24] 2025-06-06 13:24:37,777 [wrapper] ==== wrapper stdout END ====
[2025-06-06 15:29:24] 2025-06-06 13:24:37,892 [wrapper] ==== wrapper stderr END ====
[2025-06-06 15:29:24]  *** Error codes and diagnostics ***
[2025-06-06 15:29:24]     "exeErrorCode": 0,
[2025-06-06 15:29:24]     "exeErrorDiag": "",
[2025-06-06 15:29:24]     "pilotErrorCode": 0,
[2025-06-06 15:29:24]     "pilotErrorDiag": "",
[2025-06-06 15:29:24]  *** Listing of results directory ***
[2025-06-06 15:29:24] total 416684
[2025-06-06 15:29:24] -rw-r--r--. 1 boinc boinc    495897 May 29 06:02 pilot3.tar.gz
[2025-06-06 15:29:24] -rwx------. 1 boinc boinc     37140 May 29 06:05 runpilot2-wrapper.sh
[2025-06-06 15:29:24] -rw-r--r--. 1 boinc boinc      5111 May 29 06:05 queuedata.json
[2025-06-06 15:29:24] -rw-r--r--. 1 boinc boinc       100 Jun  6 10:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 15:29:24] -rwxr-xr-x. 1 boinc boinc      7986 Jun  6 10:06 run_atlas
[2025-06-06 15:29:24] -rw-r--r--. 1 boinc boinc       105 Jun  6 10:06 job.xml
[2025-06-06 15:29:24] -rw-r--r--. 2 boinc boinc 222964454 Jun  6 10:06 EVNT.44871834._003676.pool.root.1
[2025-06-06 15:29:24] -rw-r--r--. 1 boinc boinc      6391 Jun  6 10:06 init_data.xml
[2025-06-06 15:29:24] -rw-r--r--. 2 boinc boinc     15093 Jun  6 10:06 start_atlas.sh
[2025-06-06 15:29:24] drwxrwx--x. 2 boinc boinc        68 Jun  6 10:06 shared
[2025-06-06 15:29:24] -rw-r--r--. 2 boinc boinc    508872 Jun  6 10:06 input.tar.gz
[2025-06-06 15:29:24] -rw-r--r--. 1 boinc boinc         0 Jun  6 10:06 boinc_lockfile
[2025-06-06 15:29:24] -rw-r--r--. 1 boinc boinc      2559 Jun  6 10:07 pandaJob.out
[2025-06-06 15:29:24] -rw-------. 1 boinc boinc    987967 Jun  6 10:10 agis_schedconf.cvmfs.json
[2025-06-06 15:29:24] drwx------. 4 boinc boinc      4096 Jun  6 10:10 pilot3
[2025-06-06 15:29:24] -rw-------. 1 boinc boinc 195803215 Jun  6 15:21 HITS.44871837._094649.pool.root.1
[2025-06-06 15:29:24] -rw-r--r--. 1 boinc boinc       531 Jun  6 15:21 boinc_task_state.xml
[2025-06-06 15:29:24] -rw-------. 1 boinc boinc      1016 Jun  6 15:22 memory_monitor_summary.json
[2025-06-06 15:29:24] -rw-------. 1 boinc boinc   1598969 Jun  6 15:22 agis_ddmendpoints.agis.ALL.json
[2025-06-06 15:29:24] -rw-------. 1 boinc boinc    442268 Jun  6 15:22 log.44871837._094649.job.log.tgz.1
[2025-06-06 15:29:24] -rw-------. 1 boinc boinc        95 Jun  6 15:23 pilot_heartbeat.json
[2025-06-06 15:29:24] -rw-------. 1 boinc boinc      7702 Jun  6 15:24 heartbeat.json
[2025-06-06 15:29:24] -rw-------. 1 boinc boinc      4539 Jun  6 15:24 pilotlog.txt
[2025-06-06 15:29:24] -rw-------. 1 boinc boinc   1606617 Jun  6 15:24 log.44871837._094649.job.log.1
[2025-06-06 15:29:24] -rw-------. 1 boinc boinc       357 Jun  6 15:24 output.list
[2025-06-06 15:29:24] -rw-r--r--. 1 boinc boinc       620 Jun  6 15:24 runtime_log
[2025-06-06 15:29:24] -rw-------. 1 boinc boinc   2068480 Jun  6 15:24 result.tar.gz
[2025-06-06 15:29:24] -rw-r--r--. 1 boinc boinc      8659 Jun  6 15:24 runtime_log.err
[2025-06-06 15:29:24] -rw-------. 1 boinc boinc       658 Jun  6 15:24 kdfMDmshje7n9Rq4apOajLDm4fhM0noT9bVof3QYDmPbUKDmssnBBn.diag
[2025-06-06 15:29:24] -rw-r--r--. 1 boinc boinc      8192 Jun  6 15:29 boinc_mmap_file
[2025-06-06 15:29:24] -rw-r--r--. 1 boinc boinc        28 Jun  6 15:29 wrapper_checkpoint.txt
[2025-06-06 15:29:24] -rw-r--r--. 1 boinc boinc     20506 Jun  6 15:29 stderr.txt
[2025-06-06 15:29:24] HITS file was successfully produced:
[2025-06-06 15:29:24] -rw-------. 1 boinc boinc 195803215 Jun  6 15:21 shared/HITS.pool.root.1
[2025-06-06 15:29:24]  *** Contents of shared directory: ***
[2025-06-06 15:29:24] total 411492
[2025-06-06 15:29:24] -rw-r--r--. 2 boinc boinc 222964454 Jun  6 10:06 ATLAS.root_0
[2025-06-06 15:29:24] -rw-r--r--. 2 boinc boinc     15093 Jun  6 10:06 start_atlas.sh
[2025-06-06 15:29:24] -rw-r--r--. 2 boinc boinc    508872 Jun  6 10:06 input.tar.gz
[2025-06-06 15:29:24] -rw-------. 1 boinc boinc 195803215 Jun  6 15:21 HITS.pool.root.1
[2025-06-06 15:29:24] -rw-------. 1 boinc boinc   2068480 Jun  6 15:24 result.tar.gz
15:29:26 (4966): run_atlas exited; CPU time 69651.952127
15:29:26 (4966): called boinc_finish(0)

</stderr_txt>
]]>

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