Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:51:03 (3834848): wrapper (7.7.26015): starting
03:51:03 (3834848): wrapper: running run_atlas (--nthreads 8)
[2025-06-06 03:51:03] Arguments: --nthreads 8
[2025-06-06 03:51:03] Threads: 8
[2025-06-06 03:51:03] Checking for CVMFS
[2025-06-06 03:51:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 03:51:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 03:51:03] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 03:51:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 03:51:03] 2.12.6.0 5356 2425 245400 146847 2 470 27715621 32935905 20254 16776704 0 19249046 99.655 15080248 23617 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-06 03:51:03] CVMFS is ok
[2025-06-06 03:51:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 03:51:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 03:51:03] Further information can be found at the LHC@home message board.
[2025-06-06 03:51:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 03:51:03] Checking for apptainer binary...
[2025-06-06 03:51:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 03:51:03] Running /usr/bin/apptainer --version
[2025-06-06 03:51:03] apptainer version 1.4.1-1.el9
[2025-06-06 03:51:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 03:51:03] c7-16-8.aglt2.org
[2025-06-06 03:51:03] apptainer works
[2025-06-06 03:51:03] Set ATHENA_PROC_NUMBER=8
[2025-06-06 03:51:03] Set ATHENA_CORE_NUMBER=8
[2025-06-06 03:51:03] Starting ATLAS job with PandaID=6669238522
[2025-06-06 03:51:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 05:12:41]  *** The last 200 lines of the pilot log: ***
[2025-06-06 05:12:41]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-06 05:12:41]  is_altstaged=None
[2025-06-06 05:12:41]  is_tar=False
[2025-06-06 05:12:41]  lfn=log.44871837._095284.job.log.tgz.1
[2025-06-06 05:12:41]  mtime=0
[2025-06-06 05:12:41]  protocol_id=None
[2025-06-06 05:12:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 05:12:41]  replicas=None
[2025-06-06 05:12:41]  scope=mc23_13p6TeV
[2025-06-06 05:12:41]  status=None
[2025-06-06 05:12:41]  status_code=0
[2025-06-06 05:12:41]  storage_token=
[2025-06-06 05:12:41]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6669238522/log.44871837._095284.job.log.tgz.1
[2025-06-06 05:12:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f7/33/log.44871837._095284.job.log.tgz.1
[2025-06-06 05:12:41]  workdir=None
[2025-06-06 05:12:41] ]
[2025-06-06 05:12:41] 2025-06-06 09:12:14,908 | INFO     | transferring file log.44871837._095284.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6669238522/log.44871837._095284.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-06 05:12:41] 2025-06-06 09:12:14,909 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6669238522/log.44871837._095284.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._095284.job
[2025-06-06 05:12:41] 2025-06-06 09:12:14,925 | INFO     | adding to output.list: log.44871837._095284.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f7/33/log.44871837._095284.job.log.tg
[2025-06-06 05:12:41] 2025-06-06 09:12:14,925 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 05:12:41] 2025-06-06 09:12:14,925 | INFO     | summary of transferred files:
[2025-06-06 05:12:41] 2025-06-06 09:12:14,925 | INFO     |  -- lfn=log.44871837._095284.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 05:12:41] 2025-06-06 09:12:14,925 | INFO     | stage-out finished correctly
[2025-06-06 05:12:41] 2025-06-06 09:12:16,664 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 05:12:41] 2025-06-06 09:12:16,730 | INFO     | job 6669238522 has state=finished
[2025-06-06 05:12:41] 2025-06-06 09:12:16,730 | INFO     | preparing for final server update for job 6669238522 in state='finished'
[2025-06-06 05:12:41] 2025-06-06 09:12:16,731 | INFO     | this job has now completed (state=finished)
[2025-06-06 05:12:41] 2025-06-06 09:12:16,731 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 05:12:41] 2025-06-06 09:12:16,731 | INFO     | log transfer has been attempted: DONE
[2025-06-06 05:12:41] 2025-06-06 09:12:16,731 | INFO     | job 6669238522 has finished - writing final server update
[2025-06-06 05:12:41] 2025-06-06 09:12:16,731 | INFO     | total number of processed events: 400 (read)
[2025-06-06 05:12:41] 2025-06-06 09:12:16,749 | INFO     | executing command: lscpu
[2025-06-06 05:12:41] 2025-06-06 09:12:16,838 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 05:12:41] 2025-06-06 09:12:20,196 | WARNING  | process 3845646 can no longer be monitored (due to stat problems) - aborting
[2025-06-06 05:12:41] 2025-06-06 09:12:20,197 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6669238522/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 05:12:41] 2025-06-06 09:12:20,387 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 05:12:41] 2025-06-06 09:12:20,387 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6669238522/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 05:12:41] 2025-06-06 09:12:20,388 | INFO     | extracted standard info from prmon json
[2025-06-06 05:12:41] 2025-06-06 09:12:20,388 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 05:12:41] 2025-06-06 09:12:20,388 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 05:12:41] 2025-06-06 09:12:20,388 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 05:12:41] 2025-06-06 09:12:20,389 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 05:12:41] 2025-06-06 09:12:20,390 | INFO     | fitting pss+swap vs Time
[2025-06-06 05:12:41] 2025-06-06 09:12:20,390 | INFO     | sum of square deviations: 120605052.0
[2025-06-06 05:12:41] 2025-06-06 09:12:20,391 | INFO     | sum of deviations: 1238649590.9999998
[2025-06-06 05:12:41] 2025-06-06 09:12:20,391 | INFO     | mean x: 1749198799.0
[2025-06-06 05:12:41] 2025-06-06 09:12:20,391 | INFO     | mean y: 2726777.2328767125
[2025-06-06 05:12:41] 2025-06-06 09:12:20,391 | INFO     | -- intersect: -17962062765.40619
[2025-06-06 05:12:41] 2025-06-06 09:12:20,391 | INFO     | intersect: -17962062765.40619
[2025-06-06 05:12:41] 2025-06-06 09:12:20,391 | INFO     | chi2: 0.00756107227441615
[2025-06-06 05:12:41] 2025-06-06 09:12:20,392 | INFO     | -- intersect: -17962062765.40619
[2025-06-06 05:12:41] 2025-06-06 09:12:20,392 | INFO     | current memory leak: 10.27 B/s (using 73 data points, chi2=0.01)
[2025-06-06 05:12:41] 2025-06-06 09:12:20,392 | INFO     | ..............................
[2025-06-06 05:12:41] 2025-06-06 09:12:20,392 | INFO     | . Timing measurements:
[2025-06-06 05:12:41] 2025-06-06 09:12:20,392 | INFO     | . get job = 0 s
[2025-06-06 05:12:41] 2025-06-06 09:12:20,393 | INFO     | . initial setup = 2 s
[2025-06-06 05:12:41] 2025-06-06 09:12:20,393 | INFO     | . payload setup = 5 s
[2025-06-06 05:12:41] 2025-06-06 09:12:20,393 | INFO     | . stage-in = 0 s
[2025-06-06 05:12:41] 2025-06-06 09:12:20,393 | INFO     | . payload execution = 4835 s
[2025-06-06 05:12:41] 2025-06-06 09:12:20,393 | INFO     | . stage-out = 0 s
[2025-06-06 05:12:41] 2025-06-06 09:12:20,393 | INFO     | . log creation = 0 s
[2025-06-06 05:12:41] 2025-06-06 09:12:20,393 | INFO     | ..............................
[2025-06-06 05:12:41] 2025-06-06 09:12:20,635 | INFO     | number of running child processes to parent process 3845646: 1
[2025-06-06 05:12:41] 2025-06-06 09:12:20,635 | INFO     | maximum number of monitored processes: 6
[2025-06-06 05:12:41] 2025-06-06 09:12:20,635 | INFO     | aborting job monitoring since job object (job id=6669238522) has expired
[2025-06-06 05:12:41] 2025-06-06 09:12:20,876 | INFO     | 
[2025-06-06 05:12:41] 2025-06-06 09:12:20,876 | INFO     | job summary report
[2025-06-06 05:12:41] 2025-06-06 09:12:20,876 | INFO     | --------------------------------------------------
[2025-06-06 05:12:41] 2025-06-06 09:12:20,876 | INFO     | PanDA job id: 6669238522
[2025-06-06 05:12:41] 2025-06-06 09:12:20,876 | INFO     | task id: 44871837
[2025-06-06 05:12:41] 2025-06-06 09:12:20,876 | INFO     | errors: (none)
[2025-06-06 05:12:41] 2025-06-06 09:12:20,876 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 05:12:41] 2025-06-06 09:12:20,876 | INFO     | pilot state: finished 
[2025-06-06 05:12:41] 2025-06-06 09:12:20,876 | INFO     | transexitcode: 0
[2025-06-06 05:12:41] 2025-06-06 09:12:20,877 | INFO     | exeerrorcode: 0
[2025-06-06 05:12:41] 2025-06-06 09:12:20,877 | INFO     | exeerrordiag: 
[2025-06-06 05:12:41] 2025-06-06 09:12:20,877 | INFO     | exitcode: 0
[2025-06-06 05:12:41] 2025-06-06 09:12:20,877 | INFO     | exitmsg: OK
[2025-06-06 05:12:41] 2025-06-06 09:12:20,877 | INFO     | cpuconsumptiontime: 35951 s
[2025-06-06 05:12:41] 2025-06-06 09:12:20,877 | INFO     | nevents: 400
[2025-06-06 05:12:41] 2025-06-06 09:12:20,877 | INFO     | neventsw: 0
[2025-06-06 05:12:41] 2025-06-06 09:12:20,877 | INFO     | pid: 3845646
[2025-06-06 05:12:41] 2025-06-06 09:12:20,877 | INFO     | pgrp: 3845646
[2025-06-06 05:12:41] 2025-06-06 09:12:20,877 | INFO     | corecount: 8
[2025-06-06 05:12:41] 2025-06-06 09:12:20,877 | INFO     | event service: False
[2025-06-06 05:12:41] 2025-06-06 09:12:20,877 | INFO     | sizes: {0: 2397392, 4: 2397598, 11: 2397626, 4845: 2423756, 4847: 2432697, 4849: 2432753, 4852: 2433051}
[2025-06-06 05:12:41] 2025-06-06 09:12:20,877 | INFO     | --------------------------------------------------
[2025-06-06 05:12:41] 2025-06-06 09:12:20,877 | INFO     | 
[2025-06-06 05:12:41] 2025-06-06 09:12:20,877 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 05:12:41] 2025-06-06 09:12:20,895 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 05:12:41] 2025-06-06 09:12:20,896 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 05:12:41] 2025-06-06 09:12:20,896 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 05:12:41] 2025-06-06 09:12:20,896 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 05:12:41] 2025-06-06 09:12:20,896 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 05:12:41] 2025-06-06 09:12:20,896 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 05:12:41] 2025-06-06 09:12:20,896 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 05:12:41] 2025-06-06 09:12:20,896 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 05:12:41] 2025-06-06 09:12:20,896 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 05:12:41] 2025-06-06 09:12:20,896 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 05:12:41] 2025-06-06 09:12:20,896 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 05:12:41] 2025-06-06 09:12:20,896 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 05:12:41] 2025-06-06 09:12:20,896 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 05:12:41] 2025-06-06 09:12:20,896 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 05:12:41] 2025-06-06 09:12:20,896 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 05:12:41] 2025-06-06 09:12:20,897 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 05:12:41] 2025-06-06 09:12:20,897 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 05:12:41] 2025-06-06 09:12:20,897 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 05:12:41] 2025-06-06 09:12:20,897 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 05:12:41] 2025-06-06 09:12:20,897 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 05:12:41] 2025-06-06 09:12:20,897 | INFO     | job 6669238522 has completed (purged errors)
[2025-06-06 05:12:41] 2025-06-06 09:12:20,897 | INFO     | overall cleanup function is called
[2025-06-06 05:12:41] 2025-06-06 09:12:21,905 | INFO     | --- collectZombieJob: --- 10, [3845646]
[2025-06-06 05:12:41] 2025-06-06 09:12:21,905 | INFO     | zombie collector waiting for pid 3845646
[2025-06-06 05:12:41] 2025-06-06 09:12:21,905 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 05:12:41] 2025-06-06 09:12:21,905 | INFO     | collected zombie processes
[2025-06-06 05:12:41] 2025-06-06 09:12:21,905 | INFO     | will attempt to kill all subprocesses of pid=3845646
[2025-06-06 05:12:41] 2025-06-06 09:12:22,252 | INFO     | process IDs to be killed: [3845646] (in reverse order)
[2025-06-06 05:12:41] 2025-06-06 09:12:22,379 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 05:12:41] 2025-06-06 09:12:22,380 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 05:12:41] 2025-06-06 09:12:22,398 | INFO     | did not find any defunct processes belonging to 3845646
[2025-06-06 05:12:41] 2025-06-06 09:12:22,415 | INFO     | did not find any defunct processes belonging to 3845646
[2025-06-06 05:12:41] 2025-06-06 09:12:22,416 | INFO     | ready for new job
[2025-06-06 05:12:41] 2025-06-06 09:12:22,416 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 05:12:41] 2025-06-06 09:12:22,417 | INFO     | **************************************
[2025-06-06 05:12:41] 2025-06-06 09:12:22,418 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 05:12:41] 2025-06-06 09:12:22,418 | INFO     | **************************************
[2025-06-06 05:12:41] 2025-06-06 09:12:22,418 | INFO     | 
[2025-06-06 05:12:41] 2025-06-06 09:12:22,434 | INFO     | architecture information:
[2025-06-06 05:12:41] 2025-06-06 09:12:22,434 | INFO     | executing command: cat /etc/os-release
[2025-06-06 05:12:41] 2025-06-06 09:12:22,445 | INFO     | cat /etc/os-release:
[2025-06-06 05:12:41] NAME="CentOS Linux"
[2025-06-06 05:12:41] VERSION="7 (Core)"
[2025-06-06 05:12:41] ID="centos"
[2025-06-06 05:12:41] ID_LIKE="rhel fedora"
[2025-06-06 05:12:41] VERSION_ID="7"
[2025-06-06 05:12:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 05:12:41] ANSI_COLOR="0;31"
[2025-06-06 05:12:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 05:12:41] HOME_URL="https://www.centos.org/"
[2025-06-06 05:12:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 05:12:41] 
[2025-06-06 05:12:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 05:12:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 05:12:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 05:12:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 05:12:41] 
[2025-06-06 05:12:41] 2025-06-06 09:12:22,446 | INFO     | **************************************
[2025-06-06 05:12:41] 2025-06-06 09:12:22,948 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 05:12:41] 2025-06-06 09:12:22,965 | INFO     | sufficient remaining disk space (76616302592 B)
[2025-06-06 05:12:41] 2025-06-06 09:12:22,965 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 05:12:41] 2025-06-06 09:12:22,965 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 05:12:41] 2025-06-06 09:12:22,965 | INFO     | update_server=False
[2025-06-06 05:12:41] 2025-06-06 09:12:22,965 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 05:12:41] 2025-06-06 09:12:22,966 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 05:12:41] 2025-06-06 09:12:23,002 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 05:12:41] 2025-06-06 09:12:23,138 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 05:12:41] 2025-06-06 09:12:23,138 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 05:12:41] 2025-06-06 09:12:23,138 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 05:12:41] 2025-06-06 09:12:23,138 | INFO     | will abort loop
[2025-06-06 05:12:41] 2025-06-06 09:12:23,353 | INFO     | all payload control threads have been joined
[2025-06-06 05:12:41] 2025-06-06 09:12:23,430 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 05:12:41] 2025-06-06 09:12:23,430 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 05:12:41] 2025-06-06 09:12:23,430 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 05:12:41] 2025-06-06 09:12:23,584 | INFO     | all data control threads have been joined
[2025-06-06 05:12:41] 2025-06-06 09:12:23,765 | INFO     | all job control threads have been joined
[2025-06-06 05:12:41] 2025-06-06 09:12:23,970 | INFO     | [job] retrieve thread has finished
[2025-06-06 05:12:41] 2025-06-06 09:12:23,984 | INFO     | [payload] validate_post thread has finished
[2025-06-06 05:12:41] 2025-06-06 09:12:24,143 | INFO     | [job] job monitor thread has finished
[2025-06-06 05:12:41] 2025-06-06 09:12:24,322 | INFO     | [payload] failed_post thread has finished
[2025-06-06 05:12:41] 2025-06-06 09:12:24,359 | INFO     | [payload] control thread has finished
[2025-06-06 05:12:41] 2025-06-06 09:12:24,589 | INFO     | [data] control thread has finished
[2025-06-06 05:12:41] 2025-06-06 09:12:24,770 | INFO     | [job] control thread has finished
[2025-06-06 05:12:41] 2025-06-06 09:12:24,824 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 05:12:41] 2025-06-06 09:12:24,843 | INFO     | [data] copytool_in thread has finished
[2025-06-06 05:12:41] 2025-06-06 09:12:25,008 | INFO     | [data] copytool_out thread has finished
[2025-06-06 05:12:41] 2025-06-06 09:12:25,050 | INFO     | [job] validate thread has finished
[2025-06-06 05:12:41] 2025-06-06 09:12:25,090 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 05:12:41] 2025-06-06 09:12:25,455 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 05:12:41] 2025-06-06 09:12:25,478 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 05:12:41] 2025-06-06 09:12:26,484 | INFO     | [job] queue monitor thread has finished
[2025-06-06 05:12:41] 2025-06-06 09:12:26,968 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 05:12:41] 2025-06-06 09:12:33,813 | INFO     | job.realtimelogging is not enabled
[2025-06-06 05:12:41] 2025-06-06 09:12:34,818 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 05:12:41] 2025-06-06 09:12:36,246 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140479781087040)>', '<ExcThread(monitor, started 140479295375104)>']
[2025-06-06 05:12:41] 2025-06-06 09:12:36,480 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 05:12:41] 2025-06-06 09:12:36,480 | INFO     | [monitor] control thread has ended
[2025-06-06 05:12:41] 2025-06-06 09:12:41,271 | INFO     | all workflow threads have been joined
[2025-06-06 05:12:41] 2025-06-06 09:12:41,271 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 05:12:41] 2025-06-06 09:12:41,271 | INFO     | traces error code: 0
[2025-06-06 05:12:41] 2025-06-06 09:12:41,271 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 05:12:41] 2025-06-06 09:12:41,385 [wrapper] ==== pilot stdout END ====
[2025-06-06 05:12:41] 2025-06-06 09:12:41,388 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 05:12:41] 2025-06-06 09:12:41,391 [wrapper] pilotpid: 3838780
[2025-06-06 05:12:41] 2025-06-06 09:12:41,393 [wrapper] Pilot exit status: 0
[2025-06-06 05:12:41] 2025-06-06 09:12:41,408 [wrapper] pandaids: 6669238522
[2025-06-06 05:12:41] 2025-06-06 09:12:41,505 [wrapper] cleanup supervisor_pilot  206462 3838781
[2025-06-06 05:12:41] 2025-06-06 09:12:41,508 [wrapper] Test setup, not cleaning
[2025-06-06 05:12:41] 2025-06-06 09:12:41,510 [wrapper] apfmon messages muted
[2025-06-06 05:12:41] 2025-06-06 09:12:41,512 [wrapper] ==== wrapper stdout END ====
[2025-06-06 05:12:41] 2025-06-06 09:12:41,514 [wrapper] ==== wrapper stderr END ====
[2025-06-06 05:12:41]  *** Error codes and diagnostics ***
[2025-06-06 05:12:41]     "exeErrorCode": 0,
[2025-06-06 05:12:41]     "exeErrorDiag": "",
[2025-06-06 05:12:41]     "pilotErrorCode": 0,
[2025-06-06 05:12:41]     "pilotErrorDiag": "",
[2025-06-06 05:12:41]  *** Listing of results directory ***
[2025-06-06 05:12:41] total 417548
[2025-06-06 05:12:41] -rw-r--r--. 1 boincer umatlas    495897 May 29 00:11 pilot3.tar.gz
[2025-06-06 05:12:41] -rwx------. 1 boincer umatlas     37140 May 29 00:54 runpilot2-wrapper.sh
[2025-06-06 05:12:41] -rw-r--r--. 1 boincer umatlas      5111 May 29 00:54 queuedata.json
[2025-06-06 05:12:41] -rw-r--r--. 1 boincer umatlas       100 Jun  6 03:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 05:12:41] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  6 03:51 run_atlas
[2025-06-06 05:12:41] -rw-r--r--. 1 boincer umatlas       105 Jun  6 03:51 job.xml
[2025-06-06 05:12:41] -rw-r--r--. 2 boincer umatlas 222818451 Jun  6 03:51 EVNT.44871834._003742.pool.root.1
[2025-06-06 05:12:41] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 03:51 start_atlas.sh
[2025-06-06 05:12:41] drwxrwx--x. 2 boincer umatlas      4096 Jun  6 03:51 shared
[2025-06-06 05:12:41] -rw-r--r--. 2 boincer umatlas    508879 Jun  6 03:51 input.tar.gz
[2025-06-06 05:12:41] -rw-r--r--. 1 boincer umatlas         0 Jun  6 03:51 boinc_lockfile
[2025-06-06 05:12:41] -rw-r--r--. 1 boincer umatlas      2559 Jun  6 03:51 pandaJob.out
[2025-06-06 05:12:41] -rw-------. 1 boincer umatlas    987967 Jun  6 03:51 agis_schedconf.cvmfs.json
[2025-06-06 05:12:41] -rw-------. 1 boincer umatlas   1598969 Jun  6 03:51 agis_ddmendpoints.agis.ALL.json
[2025-06-06 05:12:41] drwx------. 4 boincer umatlas      4096 Jun  6 03:51 pilot3
[2025-06-06 05:12:41] -rw-r--r--. 1 boincer umatlas      6930 Jun  6 05:11 init_data.xml
[2025-06-06 05:12:41] -rw-------. 1 boincer umatlas 199364602 Jun  6 05:11 HITS.44871837._095284.pool.root.1
[2025-06-06 05:12:41] -rw-r--r--. 1 boincer umatlas       529 Jun  6 05:11 boinc_task_state.xml
[2025-06-06 05:12:41] -rw-------. 1 boincer umatlas        95 Jun  6 05:12 pilot_heartbeat.json
[2025-06-06 05:12:41] -rw-------. 1 boincer umatlas      1029 Jun  6 05:12 memory_monitor_summary.json
[2025-06-06 05:12:41] -rw-------. 1 boincer umatlas    302284 Jun  6 05:12 log.44871837._095284.job.log.tgz.1
[2025-06-06 05:12:41] -rw-------. 1 boincer umatlas      7684 Jun  6 05:12 heartbeat.json
[2025-06-06 05:12:41] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 05:12 boinc_mmap_file
[2025-06-06 05:12:41] -rw-r--r--. 1 boincer umatlas        27 Jun  6 05:12 wrapper_checkpoint.txt
[2025-06-06 05:12:41] -rw-------. 1 boincer umatlas      4611 Jun  6 05:12 pilotlog.txt
[2025-06-06 05:12:41] -rw-------. 1 boincer umatlas    475100 Jun  6 05:12 log.44871837._095284.job.log.1
[2025-06-06 05:12:41] -rw-------. 1 boincer umatlas       357 Jun  6 05:12 output.list
[2025-06-06 05:12:41] -rw-r--r--. 1 boincer umatlas       620 Jun  6 05:12 runtime_log
[2025-06-06 05:12:41] -rw-------. 1 boincer umatlas    798720 Jun  6 05:12 result.tar.gz
[2025-06-06 05:12:41] -rw-------. 1 boincer umatlas       651 Jun  6 05:12 YAvLDmTSke7n9Rq4apOajLDm4fhM0noT9bVof3QYDmDgUKDmvljWln.diag
[2025-06-06 05:12:41] -rw-r--r--. 1 boincer umatlas      8654 Jun  6 05:12 runtime_log.err
[2025-06-06 05:12:41] -rw-r--r--. 1 boincer umatlas     21329 Jun  6 05:12 stderr.txt
[2025-06-06 05:12:41] HITS file was successfully produced:
[2025-06-06 05:12:41] -rw-------. 1 boincer umatlas 199364602 Jun  6 05:11 shared/HITS.pool.root.1
[2025-06-06 05:12:41]  *** Contents of shared directory: ***
[2025-06-06 05:12:41] total 413592
[2025-06-06 05:12:41] -rw-r--r--. 2 boincer umatlas 222818451 Jun  6 03:51 ATLAS.root_0
[2025-06-06 05:12:41] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 03:51 start_atlas.sh
[2025-06-06 05:12:41] -rw-r--r--. 2 boincer umatlas    508879 Jun  6 03:51 input.tar.gz
[2025-06-06 05:12:41] -rw-------. 1 boincer umatlas 199364602 Jun  6 05:11 HITS.pool.root.1
[2025-06-06 05:12:41] -rw-------. 1 boincer umatlas    798720 Jun  6 05:12 result.tar.gz
05:12:43 (3834848): run_atlas exited; CPU time 36114.448025
05:12:43 (3834848): called boinc_finish(0)

</stderr_txt>
]]>

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