Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
16:26:31 (1686570): wrapper (7.7.26015): starting
16:26:31 (1686570): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 16:26:31] Arguments: --nthreads 12
[2025-06-06 16:26:31] Threads: 12
[2025-06-06 16:26:31] Checking for CVMFS
[2025-06-06 16:26:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 16:26:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 16:26:33] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 16:26:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 16:26:35] 2.12.7.0 16016 4860 63140 146868 2 55 3183487 4096000 912 130560 0 4507679 99.992 1185545 135 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-06 16:26:35] CVMFS is ok
[2025-06-06 16:26:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 16:26:35] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-06 16:26:35] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-06 16:26:35] Further information can be found at the LHC@home message board.
[2025-06-06 16:26:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 16:26:35] Checking for apptainer binary...
[2025-06-06 16:26:35] apptainer is not installed, using version from CVMFS
[2025-06-06 16:26:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 16:26:37] g3250
[2025-06-06 16:26:37] apptainer works
[2025-06-06 16:26:37] Set ATHENA_PROC_NUMBER=12
[2025-06-06 16:26:37] Set ATHENA_CORE_NUMBER=12
[2025-06-06 16:26:37] Starting ATLAS job with PandaID=6668992971
[2025-06-06 16:26:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 19:35:32]  *** The last 200 lines of the pilot log: ***
[2025-06-06 19:35:32] 2025-06-06 19:35:13,583 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6668992971/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 19:35:32] 2025-06-06 19:35:13,583 | INFO     | extracted standard info from prmon json
[2025-06-06 19:35:32] 2025-06-06 19:35:13,583 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 19:35:32] 2025-06-06 19:35:13,583 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 19:35:32] 2025-06-06 19:35:13,584 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 19:35:32] 2025-06-06 19:35:13,584 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 19:35:32] 2025-06-06 19:35:13,585 | INFO     | fitting pss+swap vs Time
[2025-06-06 19:35:32] 2025-06-06 19:35:13,585 | INFO     | sum of square deviations: 1869302025.5
[2025-06-06 19:35:32] 2025-06-06 19:35:13,586 | INFO     | sum of deviations: -3997396185.0000052
[2025-06-06 19:35:32] 2025-06-06 19:35:13,586 | INFO     | mean x: 1749232959.5
[2025-06-06 19:35:32] 2025-06-06 19:35:13,586 | INFO     | mean y: 2734911.89010989
[2025-06-06 19:35:32] 2025-06-06 19:35:13,586 | INFO     | -- intersect: 3743370220.468055
[2025-06-06 19:35:32] 2025-06-06 19:35:13,586 | INFO     | intersect: 3743370220.468055
[2025-06-06 19:35:32] 2025-06-06 19:35:13,586 | INFO     | chi2: 2.666733576518005
[2025-06-06 19:35:32] 2025-06-06 19:35:13,586 | INFO     | sum of square deviations: 1719429448.0
[2025-06-06 19:35:32] 2025-06-06 19:35:13,587 | INFO     | sum of deviations: -3737252351.999996
[2025-06-06 19:35:32] 2025-06-06 19:35:13,587 | INFO     | mean x: 1749232807.0
[2025-06-06 19:35:32] 2025-06-06 19:35:13,587 | INFO     | mean y: 2735176.661016949
[2025-06-06 19:35:32] 2025-06-06 19:35:13,587 | INFO     | -- intersect: 3804766385.187989
[2025-06-06 19:35:32] 2025-06-06 19:35:13,587 | INFO     | intersect: 3804766385.187989
[2025-06-06 19:35:32] 2025-06-06 19:35:13,587 | INFO     | chi2: 2.6665176583892167
[2025-06-06 19:35:32] 2025-06-06 19:35:13,587 | INFO     | current chi2=2.6665176583892167 (change=0.008096726673023467 %)
[2025-06-06 19:35:32] 2025-06-06 19:35:13,587 | INFO     | right removable region: 176
[2025-06-06 19:35:32] 2025-06-06 19:35:13,587 | INFO     | sum of square deviations: 1719429448.0
[2025-06-06 19:35:32] 2025-06-06 19:35:13,588 | INFO     | sum of deviations: -46963392358.00002
[2025-06-06 19:35:32] 2025-06-06 19:35:13,588 | INFO     | mean x: 1749233112.0
[2025-06-06 19:35:32] 2025-06-06 19:35:13,588 | INFO     | mean y: 2778306.548022599
[2025-06-06 19:35:32] 2025-06-06 19:35:13,588 | INFO     | -- intersect: 47780208814.10171
[2025-06-06 19:35:32] 2025-06-06 19:35:13,588 | INFO     | intersect: 47780208814.10171
[2025-06-06 19:35:32] 2025-06-06 19:35:13,588 | INFO     | chi2: 0.45033137012584634
[2025-06-06 19:35:32] 2025-06-06 19:35:13,588 | INFO     | current chi2=0.45033137012584634 (change=83.11299733534496 %)
[2025-06-06 19:35:32] 2025-06-06 19:35:13,588 | INFO     | sum of square deviations: 1577789583.0
[2025-06-06 19:35:32] 2025-06-06 19:35:13,588 | INFO     | sum of deviations: -55750109755.49999
[2025-06-06 19:35:32] 2025-06-06 19:35:13,588 | INFO     | mean x: 1749233264.5
[2025-06-06 19:35:32] 2025-06-06 19:35:13,588 | INFO     | mean y: 2787717.9244186045
[2025-06-06 19:35:32] 2025-06-06 19:35:13,589 | INFO     | -- intersect: 61810742045.02974
[2025-06-06 19:35:32] 2025-06-06 19:35:13,589 | INFO     | intersect: 61810742045.02974
[2025-06-06 19:35:32] 2025-06-06 19:35:13,589 | INFO     | chi2: 0.29678717364688506
[2025-06-06 19:35:32] 2025-06-06 19:35:13,589 | INFO     | current chi2=0.29678717364688506 (change=34.09582513340187 %)
[2025-06-06 19:35:32] 2025-06-06 19:35:13,589 | INFO     | sum of square deviations: 1444149868.0
[2025-06-06 19:35:32] 2025-06-06 19:35:13,589 | INFO     | sum of deviations: -50570474308.99996
[2025-06-06 19:35:32] 2025-06-06 19:35:13,589 | INFO     | mean x: 1749233417.0
[2025-06-06 19:35:32] 2025-06-06 19:35:13,589 | INFO     | mean y: 2781787.3532934133
[2025-06-06 19:35:32] 2025-06-06 19:35:13,589 | INFO     | -- intersect: 61256510042.9603
[2025-06-06 19:35:32] 2025-06-06 19:35:13,589 | INFO     | intersect: 61256510042.9603
[2025-06-06 19:35:32] 2025-06-06 19:35:13,590 | INFO     | chi2: 0.2954107286504556
[2025-06-06 19:35:32] 2025-06-06 19:35:13,590 | INFO     | current chi2=0.2954107286504556 (change=0.4637818338022768 %)
[2025-06-06 19:35:32] 2025-06-06 19:35:13,590 | INFO     | left removable region: 30
[2025-06-06 19:35:32] 2025-06-06 19:35:13,590 | INFO     | sum of square deviations: 964976232.5
[2025-06-06 19:35:32] 2025-06-06 19:35:13,590 | INFO     | sum of deviations: -28283718628.500004
[2025-06-06 19:35:32] 2025-06-06 19:35:13,590 | INFO     | mean x: 1749233691.5
[2025-06-06 19:35:32] 2025-06-06 19:35:13,590 | INFO     | mean y: 2755128.609589041
[2025-06-06 19:35:32] 2025-06-06 19:35:13,590 | INFO     | -- intersect: 51273275458.112495
[2025-06-06 19:35:32] 2025-06-06 19:35:13,590 | INFO     | intersect: 51273275458.112495
[2025-06-06 19:35:32] 2025-06-06 19:35:13,590 | INFO     | chi2: 0.25202987862820325
[2025-06-06 19:35:32] 2025-06-06 19:35:13,590 | INFO     | -- intersect: 51273275458.112495
[2025-06-06 19:35:32] 2025-06-06 19:35:13,590 | INFO     | current memory leak: -29.31 B/s (using 146 data points, chi2=0.25)
[2025-06-06 19:35:32] 2025-06-06 19:35:13,591 | INFO     | ..............................
[2025-06-06 19:35:32] 2025-06-06 19:35:13,591 | INFO     | . Timing measurements:
[2025-06-06 19:35:32] 2025-06-06 19:35:13,591 | INFO     | . get job = 0 s
[2025-06-06 19:35:32] 2025-06-06 19:35:13,591 | INFO     | . initial setup = 3 s
[2025-06-06 19:35:32] 2025-06-06 19:35:13,591 | INFO     | . payload setup = 54 s
[2025-06-06 19:35:32] 2025-06-06 19:35:13,591 | INFO     | . stage-in = 0 s
[2025-06-06 19:35:32] 2025-06-06 19:35:13,591 | INFO     | . payload execution = 11109 s
[2025-06-06 19:35:32] 2025-06-06 19:35:13,591 | INFO     | . stage-out = 0 s
[2025-06-06 19:35:32] 2025-06-06 19:35:13,591 | INFO     | . log creation = 0 s
[2025-06-06 19:35:32] 2025-06-06 19:35:13,591 | INFO     | ..............................
[2025-06-06 19:35:32] 2025-06-06 19:35:13,697 | INFO     | 
[2025-06-06 19:35:32] 2025-06-06 19:35:13,697 | INFO     | job summary report
[2025-06-06 19:35:32] 2025-06-06 19:35:13,697 | INFO     | --------------------------------------------------
[2025-06-06 19:35:32] 2025-06-06 19:35:13,697 | INFO     | PanDA job id: 6668992971
[2025-06-06 19:35:32] 2025-06-06 19:35:13,697 | INFO     | task id: 44871837
[2025-06-06 19:35:32] 2025-06-06 19:35:13,697 | INFO     | errors: (none)
[2025-06-06 19:35:32] 2025-06-06 19:35:13,697 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 19:35:32] 2025-06-06 19:35:13,697 | INFO     | pilot state: finished 
[2025-06-06 19:35:32] 2025-06-06 19:35:13,698 | INFO     | transexitcode: 0
[2025-06-06 19:35:32] 2025-06-06 19:35:13,698 | INFO     | exeerrorcode: 0
[2025-06-06 19:35:32] 2025-06-06 19:35:13,698 | INFO     | exeerrordiag: 
[2025-06-06 19:35:32] 2025-06-06 19:35:13,698 | INFO     | exitcode: 0
[2025-06-06 19:35:32] 2025-06-06 19:35:13,698 | INFO     | exitmsg: OK
[2025-06-06 19:35:32] 2025-06-06 19:35:13,698 | INFO     | cpuconsumptiontime: 53617 s
[2025-06-06 19:35:32] 2025-06-06 19:35:13,698 | INFO     | nevents: 400
[2025-06-06 19:35:32] 2025-06-06 19:35:13,698 | INFO     | neventsw: 0
[2025-06-06 19:35:32] 2025-06-06 19:35:13,698 | INFO     | pid: 1696648
[2025-06-06 19:35:32] 2025-06-06 19:35:13,698 | INFO     | pgrp: 1696648
[2025-06-06 19:35:32] 2025-06-06 19:35:13,698 | INFO     | corecount: 12
[2025-06-06 19:35:32] 2025-06-06 19:35:13,698 | INFO     | event service: False
[2025-06-06 19:35:32] 2025-06-06 19:35:13,698 | INFO     | sizes: {0: 2396513, 1: 2397221, 2: 2397420, 13: 2397420, 24: 2397476, 34: 2371534, 35: 2397866, 45: 2397894, 11167: 2426777, 11168: 2435764, 11170: 2435820, 11173:
[2025-06-06 19:35:32] 2025-06-06 19:35:13,698 | INFO     | --------------------------------------------------
[2025-06-06 19:35:32] 2025-06-06 19:35:13,698 | INFO     | 
[2025-06-06 19:35:32] 2025-06-06 19:35:13,698 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-06-06 19:35:32] 2025-06-06 19:35:13,707 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 19:35:32] 2025-06-06 19:35:13,707 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 19:35:32] 2025-06-06 19:35:13,708 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 19:35:32] 2025-06-06 19:35:13,708 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 19:35:32] 2025-06-06 19:35:13,708 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 19:35:32] 2025-06-06 19:35:13,708 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 19:35:32] 2025-06-06 19:35:13,708 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 19:35:32] 2025-06-06 19:35:13,708 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 19:35:32] 2025-06-06 19:35:13,708 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 19:35:32] 2025-06-06 19:35:13,708 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 19:35:32] 2025-06-06 19:35:13,708 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 19:35:32] 2025-06-06 19:35:13,708 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 19:35:32] 2025-06-06 19:35:13,708 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 19:35:32] 2025-06-06 19:35:13,708 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 19:35:32] 2025-06-06 19:35:13,708 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 19:35:32] 2025-06-06 19:35:13,708 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 19:35:32] 2025-06-06 19:35:13,708 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 19:35:32] 2025-06-06 19:35:13,708 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 19:35:32] 2025-06-06 19:35:13,708 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 19:35:32] 2025-06-06 19:35:13,708 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 19:35:32] 2025-06-06 19:35:13,708 | INFO     | job 6668992971 has completed (purged errors)
[2025-06-06 19:35:32] 2025-06-06 19:35:13,708 | INFO     | overall cleanup function is called
[2025-06-06 19:35:32] 2025-06-06 19:35:14,715 | INFO     | --- collectZombieJob: --- 10, [1696648]
[2025-06-06 19:35:32] 2025-06-06 19:35:14,715 | INFO     | zombie collector waiting for pid 1696648
[2025-06-06 19:35:32] 2025-06-06 19:35:14,715 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 19:35:32] 2025-06-06 19:35:14,715 | INFO     | collected zombie processes
[2025-06-06 19:35:32] 2025-06-06 19:35:14,715 | INFO     | will attempt to kill all subprocesses of pid=1696648
[2025-06-06 19:35:32] 2025-06-06 19:35:14,743 | INFO     | process IDs to be killed: [1696648] (in reverse order)
[2025-06-06 19:35:32] 2025-06-06 19:35:14,759 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 19:35:32] 2025-06-06 19:35:14,759 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 19:35:32] 2025-06-06 19:35:14,760 | INFO     | did not find any defunct processes belonging to 1696648
[2025-06-06 19:35:32] 2025-06-06 19:35:14,760 | INFO     | did not find any defunct processes belonging to 1696648
[2025-06-06 19:35:32] 2025-06-06 19:35:14,761 | INFO     | ready for new job
[2025-06-06 19:35:32] 2025-06-06 19:35:14,761 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 19:35:32] 2025-06-06 19:35:14,761 | INFO     | **************************************
[2025-06-06 19:35:32] 2025-06-06 19:35:14,762 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 19:35:32] 2025-06-06 19:35:14,762 | INFO     | **************************************
[2025-06-06 19:35:32] 2025-06-06 19:35:14,762 | INFO     | 
[2025-06-06 19:35:32] 2025-06-06 19:35:14,779 | INFO     | architecture information:
[2025-06-06 19:35:32] 2025-06-06 19:35:14,779 | INFO     | executing command: cat /etc/os-release
[2025-06-06 19:35:32] 2025-06-06 19:35:14,784 | INFO     | cat /etc/os-release:
[2025-06-06 19:35:32] NAME="CentOS Linux"
[2025-06-06 19:35:32] VERSION="7 (Core)"
[2025-06-06 19:35:32] ID="centos"
[2025-06-06 19:35:32] ID_LIKE="rhel fedora"
[2025-06-06 19:35:32] VERSION_ID="7"
[2025-06-06 19:35:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 19:35:32] ANSI_COLOR="0;31"
[2025-06-06 19:35:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 19:35:32] HOME_URL="https://www.centos.org/"
[2025-06-06 19:35:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 19:35:32] 
[2025-06-06 19:35:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 19:35:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 19:35:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 19:35:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 19:35:32] 
[2025-06-06 19:35:32] 2025-06-06 19:35:14,784 | INFO     | **************************************
[2025-06-06 19:35:32] 2025-06-06 19:35:15,287 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-06-06 19:35:32] 2025-06-06 19:35:15,292 | INFO     | sufficient remaining disk space (32371638272 B)
[2025-06-06 19:35:32] 2025-06-06 19:35:15,292 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 19:35:32] 2025-06-06 19:35:15,292 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 19:35:32] 2025-06-06 19:35:15,292 | INFO     | update_server=False
[2025-06-06 19:35:32] 2025-06-06 19:35:15,292 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 19:35:32] 2025-06-06 19:35:15,292 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 19:35:32] 2025-06-06 19:35:15,292 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 19:35:32] 2025-06-06 19:35:15,293 | INFO     | aborting loop
[2025-06-06 19:35:32] 2025-06-06 19:35:15,453 | INFO     | all payload control threads have been joined
[2025-06-06 19:35:32] 2025-06-06 19:35:15,703 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 19:35:32] 2025-06-06 19:35:15,703 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 19:35:32] 2025-06-06 19:35:15,703 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 19:35:32] 2025-06-06 19:35:16,206 | INFO     | all data control threads have been joined
[2025-06-06 19:35:32] 2025-06-06 19:35:16,297 | INFO     | [job] retrieve thread has finished
[2025-06-06 19:35:32] 2025-06-06 19:35:16,298 | INFO     | [job] queue monitor thread has finished
[2025-06-06 19:35:32] 2025-06-06 19:35:16,298 | INFO     | [job] job monitor thread has finished
[2025-06-06 19:35:32] 2025-06-06 19:35:16,450 | INFO     | [payload] validate_post thread has finished
[2025-06-06 19:35:32] 2025-06-06 19:35:16,454 | INFO     | [payload] control thread has finished
[2025-06-06 19:35:32] 2025-06-06 19:35:16,474 | INFO     | all job control threads have been joined
[2025-06-06 19:35:32] 2025-06-06 19:35:16,522 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 19:35:32] 2025-06-06 19:35:16,546 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 19:35:32] 2025-06-06 19:35:16,904 | INFO     | [data] copytool_in thread has finished
[2025-06-06 19:35:32] 2025-06-06 19:35:17,042 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 19:35:32] 2025-06-06 19:35:17,077 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 19:35:32] 2025-06-06 19:35:17,207 | INFO     | [data] control thread has finished
[2025-06-06 19:35:32] 2025-06-06 19:35:17,312 | INFO     | [job] validate thread has finished
[2025-06-06 19:35:32] 2025-06-06 19:35:17,414 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 19:35:32] 2025-06-06 19:35:17,480 | INFO     | [job] control thread has finished
[2025-06-06 19:35:32] 2025-06-06 19:35:17,552 | INFO     | [payload] failed_post thread has finished
[2025-06-06 19:35:32] 2025-06-06 19:35:18,552 | INFO     | [data] copytool_out thread has finished
[2025-06-06 19:35:32] 2025-06-06 19:35:21,083 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 19:35:32] 2025-06-06 19:35:25,571 | INFO     | job.realtimelogging is not enabled
[2025-06-06 19:35:32] 2025-06-06 19:35:26,576 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 19:35:32] 2025-06-06 19:35:27,128 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139691669788480)>', '<ExcThread(monitor, started 139691219199744)>']
[2025-06-06 19:35:32] 2025-06-06 19:35:27,762 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 19:35:32] 2025-06-06 19:35:27,762 | INFO     | [monitor] control thread has ended
[2025-06-06 19:35:32] 2025-06-06 19:35:32,153 | INFO     | all workflow threads have been joined
[2025-06-06 19:35:32] 2025-06-06 19:35:32,153 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 19:35:32] 2025-06-06 19:35:32,153 | INFO     | traces error code: 0
[2025-06-06 19:35:32] 2025-06-06 19:35:32,153 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 19:35:32] 2025-06-06 19:35:32,209 [wrapper] ==== pilot stdout END ====
[2025-06-06 19:35:32] 2025-06-06 19:35:32,211 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 19:35:32] 2025-06-06 19:35:32,212 [wrapper] pilotpid: 1690180
[2025-06-06 19:35:32] 2025-06-06 19:35:32,213 [wrapper] Pilot exit status: 0
[2025-06-06 19:35:32] 2025-06-06 19:35:32,217 [wrapper] pandaids: 6668992971
[2025-06-06 19:35:32] 2025-06-06 19:35:32,225 [wrapper] cleanup supervisor_pilot 1727329 1690181
[2025-06-06 19:35:32] 2025-06-06 19:35:32,227 [wrapper] Test setup, not cleaning
[2025-06-06 19:35:32] 2025-06-06 19:35:32,228 [wrapper] apfmon messages muted
[2025-06-06 19:35:32] 2025-06-06 19:35:32,229 [wrapper] ==== wrapper stdout END ====
[2025-06-06 19:35:32] 2025-06-06 19:35:32,230 [wrapper] ==== wrapper stderr END ====
[2025-06-06 19:35:32]  *** Error codes and diagnostics ***
[2025-06-06 19:35:32]     "exeErrorCode": 0,
[2025-06-06 19:35:32]     "exeErrorDiag": "",
[2025-06-06 19:35:32]     "pilotErrorCode": 0,
[2025-06-06 19:35:32]     "pilotErrorDiag": "",
[2025-06-06 19:35:32]  *** Listing of results directory ***
[2025-06-06 19:35:32] total 418128
[2025-06-06 19:35:32] -rw-r--r-- 1 boinc boinc    495897 May 29 00:19 pilot3.tar.gz
[2025-06-06 19:35:32] -rw-r--r-- 1 boinc boinc      5111 May 29 00:34 queuedata.json
[2025-06-06 19:35:32] -rwx------ 1 boinc boinc     37140 May 29 00:36 runpilot2-wrapper.sh
[2025-06-06 19:35:32] -rw-rw-r-- 1 boinc boinc       100 Jun  6 16:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 19:35:32] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 16:26 run_atlas
[2025-06-06 19:35:32] -rw-rw-r-- 1 boinc boinc       105 Jun  6 16:26 job.xml
[2025-06-06 19:35:32] -rw-r--r-- 2 boinc boinc     15093 Jun  6 16:26 start_atlas.sh
[2025-06-06 19:35:32] drwxrwx--x 2 boinc boinc      4096 Jun  6 16:26 shared
[2025-06-06 19:35:32] -rw-r--r-- 2 boinc boinc    508880 Jun  6 16:26 input.tar.gz
[2025-06-06 19:35:32] -rw-rw-r-- 1 boinc boinc      9357 Jun  6 16:26 init_data.xml
[2025-06-06 19:35:32] -rw-r--r-- 2 boinc boinc 225192398 Jun  6 16:26 EVNT.44871834._003598.pool.root.1
[2025-06-06 19:35:32] -rw-rw-r-- 1 boinc boinc         0 Jun  6 16:26 boinc_lockfile
[2025-06-06 19:35:32] -rw-rw-r-- 1 boinc boinc      2558 Jun  6 16:26 pandaJob.out
[2025-06-06 19:35:32] -rw------- 1 boinc boinc    985748 Jun  6 16:27 agis_schedconf.cvmfs.json
[2025-06-06 19:35:32] drwx------ 4 boinc boinc      4096 Jun  6 16:27 pilot3
[2025-06-06 19:35:32] -rw------- 1 boinc boinc 196183094 Jun  6 19:34 HITS.44871837._092498.pool.root.1
[2025-06-06 19:35:32] -rw-rw-r-- 1 boinc boinc       530 Jun  6 19:34 boinc_task_state.xml
[2025-06-06 19:35:32] -rw------- 1 boinc boinc      1019 Jun  6 19:35 memory_monitor_summary.json
[2025-06-06 19:35:32] -rw------- 1 boinc boinc   1598969 Jun  6 19:35 agis_ddmendpoints.agis.ALL.json
[2025-06-06 19:35:32] -rw------- 1 boinc boinc    416639 Jun  6 19:35 log.44871837._092498.job.log.tgz.1
[2025-06-06 19:35:32] -rw------- 1 boinc boinc      7667 Jun  6 19:35 heartbeat.json
[2025-06-06 19:35:32] -rw------- 1 boinc boinc        95 Jun  6 19:35 pilot_heartbeat.json
[2025-06-06 19:35:32] -rw-rw-r-- 1 boinc boinc      8192 Jun  6 19:35 boinc_mmap_file
[2025-06-06 19:35:32] -rw-rw-r-- 1 boinc boinc        28 Jun  6 19:35 wrapper_checkpoint.txt
[2025-06-06 19:35:32] -rw------- 1 boinc boinc      4448 Jun  6 19:35 pilotlog.txt
[2025-06-06 19:35:32] -rw------- 1 boinc boinc   1057478 Jun  6 19:35 log.44871837._092498.job.log.1
[2025-06-06 19:35:32] -rw------- 1 boinc boinc       357 Jun  6 19:35 output.list
[2025-06-06 19:35:32] -rw-rw-r-- 1 boinc boinc       620 Jun  6 19:35 runtime_log
[2025-06-06 19:35:32] -rw------- 1 boinc boinc   1495040 Jun  6 19:35 result.tar.gz
[2025-06-06 19:35:32] -rw------- 1 boinc boinc       652 Jun  6 19:35 zDcNDm5Qge7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfPdKDm2tM02m.diag
[2025-06-06 19:35:32] -rw-rw-r-- 1 boinc boinc      8949 Jun  6 19:35 runtime_log.err
[2025-06-06 19:35:32] -rw-rw-r-- 1 boinc boinc     21031 Jun  6 19:35 stderr.txt
[2025-06-06 19:35:32] HITS file was successfully produced:
[2025-06-06 19:35:32] -rw------- 1 boinc boinc 196183094 Jun  6 19:34 shared/HITS.pool.root.1
[2025-06-06 19:35:32]  *** Contents of shared directory: ***
[2025-06-06 19:35:32] total 413488
[2025-06-06 19:35:32] -rw-r--r-- 2 boinc boinc     15093 Jun  6 16:26 start_atlas.sh
[2025-06-06 19:35:32] -rw-r--r-- 2 boinc boinc    508880 Jun  6 16:26 input.tar.gz
[2025-06-06 19:35:32] -rw-r--r-- 2 boinc boinc 225192398 Jun  6 16:26 ATLAS.root_0
[2025-06-06 19:35:32] -rw------- 1 boinc boinc 196183094 Jun  6 19:34 HITS.pool.root.1
[2025-06-06 19:35:32] -rw------- 1 boinc boinc   1495040 Jun  6 19:35 result.tar.gz
19:35:33 (1686570): run_atlas exited; CPU time 53689.490467
19:35:33 (1686570): called boinc_finish(0)

</stderr_txt>
]]>

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