Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:55:36 (11376): wrapper (7.7.26015): starting
02:55:36 (11376): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 02:55:36] Arguments: --nthreads 12
[2025-06-06 02:55:36] Threads: 12
[2025-06-06 02:55:36] Checking for CVMFS
[2025-06-06 02:55:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 02:55:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 02:55:37] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 02:55:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 02:55:37] 2.11.2.0 2959 38183 92856 146846 0 1 19736344 20275201 1 130560 0 17302935 99.983 7015677 8517 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-06 02:55:37] CVMFS is ok
[2025-06-06 02:55:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 02:55:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 02:55:37] Further information can be found at the LHC@home message board.
[2025-06-06 02:55:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 02:55:37] Checking for apptainer binary...
[2025-06-06 02:55:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 02:55:37] Running /usr/bin/apptainer --version
[2025-06-06 02:55:37] apptainer version 1.3.2-1.el7
[2025-06-06 02:55:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 02:55:38] c-205-24.aglt2.org
[2025-06-06 02:55:38] apptainer works
[2025-06-06 02:55:38] Set ATHENA_PROC_NUMBER=12
[2025-06-06 02:55:38] Set ATHENA_CORE_NUMBER=12
[2025-06-06 02:55:38] Starting ATLAS job with PandaID=6677392991
[2025-06-06 02:55:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 04:03:01]  *** The last 200 lines of the pilot log: ***
[2025-06-06 04:03:01]  lfn=log.45006595._008180.job.log.tgz.1
[2025-06-06 04:03:01]  mtime=0
[2025-06-06 04:03:01]  protocol_id=None
[2025-06-06 04:03:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 04:03:01]  replicas=None
[2025-06-06 04:03:01]  scope=mc23_13p6TeV
[2025-06-06 04:03:01]  status=None
[2025-06-06 04:03:01]  status_code=0
[2025-06-06 04:03:01]  storage_token=
[2025-06-06 04:03:01]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677392991/log.45006595._008180.job.log.tgz.1
[2025-06-06 04:03:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f2/3a/log.45006595._008180.job.log.tgz.1
[2025-06-06 04:03:01]  workdir=None
[2025-06-06 04:03:01] ]
[2025-06-06 04:03:01] 2025-06-06 08:02:32,039 | INFO     | transferring file log.45006595._008180.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677392991/log.45006595._008180.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-06 04:03:01] 2025-06-06 08:02:32,039 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677392991/log.45006595._008180.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._008180.job
[2025-06-06 04:03:01] 2025-06-06 08:02:32,059 | INFO     | adding to output.list: log.45006595._008180.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f2/3a/log.45006595._008180.job.log.tg
[2025-06-06 04:03:01] 2025-06-06 08:02:32,060 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 04:03:01] 2025-06-06 08:02:32,060 | INFO     | summary of transferred files:
[2025-06-06 04:03:01] 2025-06-06 08:02:32,060 | INFO     |  -- lfn=log.45006595._008180.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 04:03:01] 2025-06-06 08:02:32,061 | INFO     | stage-out finished correctly
[2025-06-06 04:03:01] 2025-06-06 08:02:33,923 | INFO     | monitor loop #300: job 0:6677392991 is in state 'finished'
[2025-06-06 04:03:01] 2025-06-06 08:02:33,924 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 04:03:01] 2025-06-06 08:02:34,687 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 04:03:01] 2025-06-06 08:02:36,427 | INFO     | monitor loop #301: job 0:6677392991 is in state 'finished'
[2025-06-06 04:03:01] 2025-06-06 08:02:36,427 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 04:03:01] 2025-06-06 08:02:37,505 | INFO     | job 6677392991 has state=finished
[2025-06-06 04:03:01] 2025-06-06 08:02:37,505 | INFO     | preparing for final server update for job 6677392991 in state='finished'
[2025-06-06 04:03:01] 2025-06-06 08:02:37,505 | INFO     | this job has now completed (state=finished)
[2025-06-06 04:03:01] 2025-06-06 08:02:37,506 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 04:03:01] 2025-06-06 08:02:37,506 | INFO     | log transfer has been attempted: DONE
[2025-06-06 04:03:01] 2025-06-06 08:02:37,506 | INFO     | job 6677392991 has finished - writing final server update
[2025-06-06 04:03:01] 2025-06-06 08:02:37,506 | INFO     | total number of processed events: 400 (read)
[2025-06-06 04:03:01] 2025-06-06 08:02:37,508 | INFO     | executing command: lscpu
[2025-06-06 04:03:01] 2025-06-06 08:02:37,536 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 04:03:01] 2025-06-06 08:02:38,930 | INFO     | monitor loop #302: job 0:6677392991 is in state 'finished'
[2025-06-06 04:03:01] 2025-06-06 08:02:38,930 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 04:03:01] 2025-06-06 08:02:41,433 | INFO     | monitor loop #303: job 0:6677392991 is in state 'finished'
[2025-06-06 04:03:01] 2025-06-06 08:02:41,433 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 04:03:01] 2025-06-06 08:02:42,758 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-06 04:03:01] 2025-06-06 08:02:42,758 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677392991/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 04:03:01] 2025-06-06 08:02:42,759 | INFO     | extracted standard info from prmon json
[2025-06-06 04:03:01] 2025-06-06 08:02:42,759 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 04:03:01] 2025-06-06 08:02:42,759 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 04:03:01] 2025-06-06 08:02:42,760 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 04:03:01] 2025-06-06 08:02:42,760 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 04:03:01] 2025-06-06 08:02:42,762 | INFO     | fitting pss+swap vs Time
[2025-06-06 04:03:01] 2025-06-06 08:02:42,762 | INFO     | sum of square deviations: 60482994.5
[2025-06-06 04:03:01] 2025-06-06 08:02:42,763 | INFO     | sum of deviations: -3585116125.5
[2025-06-06 04:03:01] 2025-06-06 08:02:42,763 | INFO     | mean x: 1749195026.5
[2025-06-06 04:03:01] 2025-06-06 08:02:42,763 | INFO     | mean y: 2716032.7413793104
[2025-06-06 04:03:01] 2025-06-06 08:02:42,763 | INFO     | -- intersect: 103685864461.33894
[2025-06-06 04:03:01] 2025-06-06 08:02:42,763 | INFO     | intersect: 103685864461.33894
[2025-06-06 04:03:01] 2025-06-06 08:02:42,764 | INFO     | chi2: 0.07656363039529929
[2025-06-06 04:03:01] 2025-06-06 08:02:42,764 | INFO     | -- intersect: 103685864461.33894
[2025-06-06 04:03:01] 2025-06-06 08:02:42,764 | INFO     | current memory leak: -59.27 B/s (using 58 data points, chi2=0.08)
[2025-06-06 04:03:01] 2025-06-06 08:02:42,765 | INFO     | ..............................
[2025-06-06 04:03:01] 2025-06-06 08:02:42,765 | INFO     | . Timing measurements:
[2025-06-06 04:03:01] 2025-06-06 08:02:42,765 | INFO     | . get job = 0 s
[2025-06-06 04:03:01] 2025-06-06 08:02:42,765 | INFO     | . initial setup = 2 s
[2025-06-06 04:03:01] 2025-06-06 08:02:42,765 | INFO     | . payload setup = 9 s
[2025-06-06 04:03:01] 2025-06-06 08:02:42,765 | INFO     | . stage-in = 0 s
[2025-06-06 04:03:01] 2025-06-06 08:02:42,765 | INFO     | . payload execution = 3969 s
[2025-06-06 04:03:01] 2025-06-06 08:02:42,766 | INFO     | . stage-out = 0 s
[2025-06-06 04:03:01] 2025-06-06 08:02:42,766 | INFO     | . log creation = 0 s
[2025-06-06 04:03:01] 2025-06-06 08:02:42,766 | INFO     | ..............................
[2025-06-06 04:03:01] 2025-06-06 08:02:42,850 | INFO     | 
[2025-06-06 04:03:01] 2025-06-06 08:02:42,850 | INFO     | job summary report
[2025-06-06 04:03:01] 2025-06-06 08:02:42,850 | INFO     | --------------------------------------------------
[2025-06-06 04:03:01] 2025-06-06 08:02:42,850 | INFO     | PanDA job id: 6677392991
[2025-06-06 04:03:01] 2025-06-06 08:02:42,851 | INFO     | task id: 45006595
[2025-06-06 04:03:01] 2025-06-06 08:02:42,851 | INFO     | errors: (none)
[2025-06-06 04:03:01] 2025-06-06 08:02:42,851 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 04:03:01] 2025-06-06 08:02:42,851 | INFO     | pilot state: finished 
[2025-06-06 04:03:01] 2025-06-06 08:02:42,851 | INFO     | transexitcode: 0
[2025-06-06 04:03:01] 2025-06-06 08:02:42,851 | INFO     | exeerrorcode: 0
[2025-06-06 04:03:01] 2025-06-06 08:02:42,852 | INFO     | exeerrordiag: 
[2025-06-06 04:03:01] 2025-06-06 08:02:42,852 | INFO     | exitcode: 0
[2025-06-06 04:03:01] 2025-06-06 08:02:42,852 | INFO     | exitmsg: OK
[2025-06-06 04:03:01] 2025-06-06 08:02:42,852 | INFO     | cpuconsumptiontime: 41548 s
[2025-06-06 04:03:01] 2025-06-06 08:02:42,852 | INFO     | nevents: 400
[2025-06-06 04:03:01] 2025-06-06 08:02:42,852 | INFO     | neventsw: 0
[2025-06-06 04:03:01] 2025-06-06 08:02:42,853 | INFO     | pid: 21997
[2025-06-06 04:03:01] 2025-06-06 08:02:42,853 | INFO     | pgrp: 21997
[2025-06-06 04:03:01] 2025-06-06 08:02:42,853 | INFO     | corecount: 12
[2025-06-06 04:03:01] 2025-06-06 08:02:42,853 | INFO     | event service: False
[2025-06-06 04:03:01] 2025-06-06 08:02:42,853 | INFO     | sizes: {0: 2397333, 5: 2397539, 11: 2397595, 3982: 2423271, 3983: 2432212, 3986: 2432268, 3994: 2432566}
[2025-06-06 04:03:01] 2025-06-06 08:02:42,853 | INFO     | --------------------------------------------------
[2025-06-06 04:03:01] 2025-06-06 08:02:42,853 | INFO     | 
[2025-06-06 04:03:01] 2025-06-06 08:02:42,854 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 04:03:01] 2025-06-06 08:02:42,876 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 04:03:01] 2025-06-06 08:02:42,876 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 04:03:01] 2025-06-06 08:02:42,876 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 04:03:01] 2025-06-06 08:02:42,876 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 04:03:01] 2025-06-06 08:02:42,876 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 04:03:01] 2025-06-06 08:02:42,877 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 04:03:01] 2025-06-06 08:02:42,877 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 04:03:01] 2025-06-06 08:02:42,877 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 04:03:01] 2025-06-06 08:02:42,877 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 04:03:01] 2025-06-06 08:02:42,877 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 04:03:01] 2025-06-06 08:02:42,878 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 04:03:01] 2025-06-06 08:02:42,878 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 04:03:01] 2025-06-06 08:02:42,878 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 04:03:01] 2025-06-06 08:02:42,878 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 04:03:01] 2025-06-06 08:02:42,878 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 04:03:01] 2025-06-06 08:02:42,878 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 04:03:01] 2025-06-06 08:02:42,879 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 04:03:01] 2025-06-06 08:02:42,879 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 04:03:01] 2025-06-06 08:02:42,879 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 04:03:01] 2025-06-06 08:02:42,879 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 04:03:01] 2025-06-06 08:02:42,879 | INFO     | job 6677392991 has completed (purged errors)
[2025-06-06 04:03:01] 2025-06-06 08:02:42,879 | INFO     | overall cleanup function is called
[2025-06-06 04:03:01] 2025-06-06 08:02:43,643 | INFO     | PID=14966 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-06 04:03:01] 2025-06-06 08:02:43,887 | INFO     | --- collectZombieJob: --- 10, [21997]
[2025-06-06 04:03:01] 2025-06-06 08:02:43,887 | INFO     | zombie collector waiting for pid 21997
[2025-06-06 04:03:01] 2025-06-06 08:02:43,888 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 04:03:01] 2025-06-06 08:02:43,888 | INFO     | collected zombie processes
[2025-06-06 04:03:01] 2025-06-06 08:02:43,888 | INFO     | will attempt to kill all subprocesses of pid=21997
[2025-06-06 04:03:01] 2025-06-06 08:02:43,979 | INFO     | process IDs to be killed: [21997] (in reverse order)
[2025-06-06 04:03:01] 2025-06-06 08:02:44,031 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 04:03:01] 2025-06-06 08:02:44,031 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 04:03:01] 2025-06-06 08:02:44,035 | INFO     | did not find any defunct processes belonging to 21997
[2025-06-06 04:03:01] 2025-06-06 08:02:44,038 | INFO     | did not find any defunct processes belonging to 21997
[2025-06-06 04:03:01] 2025-06-06 08:02:44,039 | INFO     | ready for new job
[2025-06-06 04:03:01] 2025-06-06 08:02:44,039 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 04:03:01] 2025-06-06 08:02:44,040 | INFO     | **************************************
[2025-06-06 04:03:01] 2025-06-06 08:02:44,040 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 04:03:01] 2025-06-06 08:02:44,040 | INFO     | **************************************
[2025-06-06 04:03:01] 2025-06-06 08:02:44,040 | INFO     | 
[2025-06-06 04:03:01] 2025-06-06 08:02:44,041 | INFO     | architecture information:
[2025-06-06 04:03:01] 2025-06-06 08:02:44,041 | INFO     | executing command: cat /etc/os-release
[2025-06-06 04:03:01] 2025-06-06 08:02:44,055 | INFO     | cat /etc/os-release:
[2025-06-06 04:03:01] NAME="CentOS Linux"
[2025-06-06 04:03:01] VERSION="7 (Core)"
[2025-06-06 04:03:01] ID="centos"
[2025-06-06 04:03:01] ID_LIKE="rhel fedora"
[2025-06-06 04:03:01] VERSION_ID="7"
[2025-06-06 04:03:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 04:03:01] ANSI_COLOR="0;31"
[2025-06-06 04:03:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 04:03:01] HOME_URL="https://www.centos.org/"
[2025-06-06 04:03:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 04:03:01] 
[2025-06-06 04:03:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 04:03:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 04:03:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 04:03:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 04:03:01] 
[2025-06-06 04:03:01] 2025-06-06 08:02:44,055 | INFO     | **************************************
[2025-06-06 04:03:01] 2025-06-06 08:02:44,558 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 04:03:01] 2025-06-06 08:02:44,574 | INFO     | sufficient remaining disk space (29425139712 B)
[2025-06-06 04:03:01] 2025-06-06 08:02:44,574 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 04:03:01] 2025-06-06 08:02:44,575 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 04:03:01] 2025-06-06 08:02:44,575 | INFO     | update_server=False
[2025-06-06 04:03:01] 2025-06-06 08:02:44,575 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 04:03:01] 2025-06-06 08:02:44,575 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 04:03:01] 2025-06-06 08:02:44,576 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 04:03:01] 2025-06-06 08:02:44,576 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 04:03:01] 2025-06-06 08:02:44,576 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 04:03:01] 2025-06-06 08:02:44,576 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 04:03:01] 2025-06-06 08:02:44,755 | INFO     | all payload control threads have been joined
[2025-06-06 04:03:01] 2025-06-06 08:02:44,939 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 04:03:01] 2025-06-06 08:02:44,939 | INFO     | aborting loop
[2025-06-06 04:03:01] 2025-06-06 08:02:45,059 | INFO     | all job control threads have been joined
[2025-06-06 04:03:01] 2025-06-06 08:02:45,161 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 04:03:01] 2025-06-06 08:02:45,282 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 04:03:01] 2025-06-06 08:02:45,372 | INFO     | all data control threads have been joined
[2025-06-06 04:03:01] 2025-06-06 08:02:45,581 | INFO     | [job] retrieve thread has finished
[2025-06-06 04:03:01] 2025-06-06 08:02:45,581 | INFO     | [job] queue monitor thread has finished
[2025-06-06 04:03:01] 2025-06-06 08:02:45,585 | INFO     | [data] copytool_in thread has finished
[2025-06-06 04:03:01] 2025-06-06 08:02:45,755 | INFO     | [payload] control thread has finished
[2025-06-06 04:03:01] 2025-06-06 08:02:45,944 | INFO     | [job] job monitor thread has finished
[2025-06-06 04:03:01] 2025-06-06 08:02:46,064 | INFO     | [job] control thread has finished
[2025-06-06 04:03:01] 2025-06-06 08:02:46,111 | INFO     | [job] validate thread has finished
[2025-06-06 04:03:01] 2025-06-06 08:02:46,164 | INFO     | [payload] failed_post thread has finished
[2025-06-06 04:03:01] 2025-06-06 08:02:46,309 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 04:03:01] 2025-06-06 08:02:46,377 | INFO     | [data] control thread has finished
[2025-06-06 04:03:01] 2025-06-06 08:02:46,556 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 04:03:01] 2025-06-06 08:02:46,694 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 04:03:01] 2025-06-06 08:02:46,754 | INFO     | [payload] validate_post thread has finished
[2025-06-06 04:03:01] 2025-06-06 08:02:47,166 | INFO     | [data] copytool_out thread has finished
[2025-06-06 04:03:01] 2025-06-06 08:02:49,288 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 04:03:01] 2025-06-06 08:02:55,209 | INFO     | job.realtimelogging is not enabled
[2025-06-06 04:03:01] 2025-06-06 08:02:56,214 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 04:03:01] 2025-06-06 08:02:56,215 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140265396725568)>', '<ExcThread(monitor, started 140264370861824)>']
[2025-06-06 04:03:01] 2025-06-06 08:02:56,631 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 04:03:01] 2025-06-06 08:02:56,631 | INFO     | [monitor] control thread has ended
[2025-06-06 04:03:01] 2025-06-06 08:03:01,240 | INFO     | all workflow threads have been joined
[2025-06-06 04:03:01] 2025-06-06 08:03:01,240 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 04:03:01] 2025-06-06 08:03:01,241 | INFO     | traces error code: 0
[2025-06-06 04:03:01] 2025-06-06 08:03:01,241 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 04:03:01] 2025-06-06 08:03:01,338 [wrapper] ==== pilot stdout END ====
[2025-06-06 04:03:01] 2025-06-06 08:03:01,342 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 04:03:01] 2025-06-06 08:03:01,346 [wrapper] pilotpid: 14966
[2025-06-06 04:03:01] 2025-06-06 08:03:01,350 [wrapper] Pilot exit status: 0
[2025-06-06 04:03:01] 2025-06-06 08:03:01,365 [wrapper] pandaids: 6677392991
[2025-06-06 04:03:01] 2025-06-06 08:03:01,405 [wrapper] cleanup supervisor_pilot 21345 14967
[2025-06-06 04:03:01] 2025-06-06 08:03:01,409 [wrapper] Test setup, not cleaning
[2025-06-06 04:03:01] 2025-06-06 08:03:01,413 [wrapper] apfmon messages muted
[2025-06-06 04:03:01] 2025-06-06 08:03:01,417 [wrapper] ==== wrapper stdout END ====
[2025-06-06 04:03:01] 2025-06-06 08:03:01,421 [wrapper] ==== wrapper stderr END ====
[2025-06-06 04:03:01]  *** Error codes and diagnostics ***
[2025-06-06 04:03:01]     "exeErrorCode": 0,
[2025-06-06 04:03:01]     "exeErrorDiag": "",
[2025-06-06 04:03:01]     "pilotErrorCode": 0,
[2025-06-06 04:03:01]     "pilotErrorDiag": "",
[2025-06-06 04:03:01]  *** Listing of results directory ***
[2025-06-06 04:03:01] total 385000
[2025-06-06 04:03:01] -rw-r--r-- 1 boincer umatlas    495897 Jun  2 14:47 pilot3.tar.gz
[2025-06-06 04:03:01] -rwx------ 1 boincer umatlas     37140 Jun  2 14:52 runpilot2-wrapper.sh
[2025-06-06 04:03:01] -rw-r--r-- 1 boincer umatlas      5111 Jun  2 14:52 queuedata.json
[2025-06-06 04:03:01] -rw-r--r-- 1 boincer umatlas       100 Jun  6 02:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 04:03:01] -rwxr-xr-x 1 boincer umatlas      7986 Jun  6 02:55 run_atlas
[2025-06-06 04:03:01] -rw-r--r-- 1 boincer umatlas       105 Jun  6 02:55 job.xml
[2025-06-06 04:03:01] -rw-r--r-- 2 boincer umatlas 213224966 Jun  6 02:55 EVNT.45006593._000328.pool.root.1
[2025-06-06 04:03:01] -rw-r--r-- 2 boincer umatlas     15093 Jun  6 02:55 start_atlas.sh
[2025-06-06 04:03:01] drwxrwx--x 2 boincer umatlas      4096 Jun  6 02:55 shared
[2025-06-06 04:03:01] -rw-r--r-- 2 boincer umatlas    508875 Jun  6 02:55 input.tar.gz
[2025-06-06 04:03:01] -rw-r--r-- 1 boincer umatlas         0 Jun  6 02:55 boinc_lockfile
[2025-06-06 04:03:01] -rw-r--r-- 1 boincer umatlas      2520 Jun  6 02:55 pandaJob.out
[2025-06-06 04:03:01] -rw------- 1 boincer umatlas    988117 Jun  6 02:55 agis_schedconf.cvmfs.json
[2025-06-06 04:03:01] -rw------- 1 boincer umatlas   1598969 Jun  6 02:55 agis_ddmendpoints.agis.ALL.json
[2025-06-06 04:03:01] drwx------ 4 boincer umatlas      4096 Jun  6 02:55 pilot3
[2025-06-06 04:03:01] -rw-r--r-- 1 boincer umatlas      5867 Jun  6 03:55 init_data.xml
[2025-06-06 04:03:01] -rw-r--r-- 1 boincer umatlas       529 Jun  6 04:02 boinc_task_state.xml
[2025-06-06 04:03:01] -rw------- 1 boincer umatlas 175713083 Jun  6 04:02 HITS.45006595._008180.pool.root.1
[2025-06-06 04:03:01] -rw------- 1 boincer umatlas      1044 Jun  6 04:02 memory_monitor_summary.json
[2025-06-06 04:03:01] -rw-r--r-- 1 boincer umatlas      8192 Jun  6 04:02 boinc_mmap_file
[2025-06-06 04:03:01] -rw-r--r-- 1 boincer umatlas        27 Jun  6 04:02 wrapper_checkpoint.txt
[2025-06-06 04:03:01] -rw------- 1 boincer umatlas    345714 Jun  6 04:02 log.45006595._008180.job.log.tgz.1
[2025-06-06 04:03:01] -rw------- 1 boincer umatlas      7743 Jun  6 04:02 heartbeat.json
[2025-06-06 04:03:01] -rw------- 1 boincer umatlas        95 Jun  6 04:02 pilot_heartbeat.json
[2025-06-06 04:03:01] -rw------- 1 boincer umatlas      4548 Jun  6 04:03 pilotlog.txt
[2025-06-06 04:03:01] -rw------- 1 boincer umatlas    390058 Jun  6 04:03 log.45006595._008180.job.log.1
[2025-06-06 04:03:01] -rw------- 1 boincer umatlas       357 Jun  6 04:03 output.list
[2025-06-06 04:03:01] -rw-r--r-- 1 boincer umatlas       620 Jun  6 04:03 runtime_log
[2025-06-06 04:03:01] -rw------- 1 boincer umatlas    757760 Jun  6 04:03 result.tar.gz
[2025-06-06 04:03:01] -rw-r--r-- 1 boincer umatlas      8661 Jun  6 04:03 runtime_log.err
[2025-06-06 04:03:01] -rw------- 1 boincer umatlas       659 Jun  6 04:03 QOKMDmvRPg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmz6fKDmsOBuCn.diag
[2025-06-06 04:03:01] -rw-r--r-- 1 boincer umatlas     21656 Jun  6 04:03 stderr.txt
[2025-06-06 04:03:01] HITS file was successfully produced:
[2025-06-06 04:03:01] -rw------- 1 boincer umatlas 175713083 Jun  6 04:02 shared/HITS.pool.root.1
[2025-06-06 04:03:01]  *** Contents of shared directory: ***
[2025-06-06 04:03:01] total 381080
[2025-06-06 04:03:01] -rw-r--r-- 2 boincer umatlas 213224966 Jun  6 02:55 ATLAS.root_0
[2025-06-06 04:03:01] -rw-r--r-- 2 boincer umatlas     15093 Jun  6 02:55 start_atlas.sh
[2025-06-06 04:03:01] -rw-r--r-- 2 boincer umatlas    508875 Jun  6 02:55 input.tar.gz
[2025-06-06 04:03:01] -rw------- 1 boincer umatlas 175713083 Jun  6 04:02 HITS.pool.root.1
[2025-06-06 04:03:01] -rw------- 1 boincer umatlas    757760 Jun  6 04:03 result.tar.gz
04:03:03 (11376): run_atlas exited; CPU time 41531.407032
04:03:03 (11376): called boinc_finish(0)

</stderr_txt>
]]>

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