Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
08:52:09 (1585405): wrapper (7.7.26015): starting
08:52:09 (1585405): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 08:52:09] Arguments: --nthreads 4
[2025-06-06 08:52:09] Threads: 4
[2025-06-06 08:52:09] Checking for CVMFS
[2025-06-06 08:52:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 08:52:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 08:52:09] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 08:52:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 08:52:10] 2.13.0.0 889978 906 49560 146846 1 131 6425600 10240001 2518 130560 1 1941954 98.582 2738317 149 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-06 08:52:10] CVMFS is ok
[2025-06-06 08:52:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 08:52:10] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-06 08:52:10] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-06 08:52:10] Further information can be found at the LHC@home message board.
[2025-06-06 08:52:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 08:52:10] Checking for apptainer binary...
[2025-06-06 08:52:10] apptainer is not installed, using version from CVMFS
[2025-06-06 08:52:10] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 08:52:10] Ryze
[2025-06-06 08:52:10] apptainer works
[2025-06-06 08:52:10] Set ATHENA_PROC_NUMBER=4
[2025-06-06 08:52:10] Set ATHENA_CORE_NUMBER=4
[2025-06-06 08:52:10] Starting ATLAS job with PandaID=6668990480
[2025-06-06 08:52:10] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 12:02:54]  *** The last 200 lines of the pilot log: ***
[2025-06-06 12:02:54] 2025-06-06 10:02:38,004 | INFO     | job 6668990480 has finished - writing final server update
[2025-06-06 12:02:54] 2025-06-06 10:02:38,004 | INFO     | total number of processed events: 400 (read)
[2025-06-06 12:02:54] 2025-06-06 10:02:38,006 | INFO     | executing command: lscpu
[2025-06-06 12:02:54] 2025-06-06 10:02:38,028 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 12:02:54] 2025-06-06 10:02:38,776 | INFO     | monitor loop #865: job 0:6668990480 is in state 'finished'
[2025-06-06 12:02:54] 2025-06-06 10:02:38,776 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 12:02:54] 2025-06-06 10:02:40,241 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 12:02:54] 2025-06-06 10:02:40,241 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6668990480/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 12:02:54] 2025-06-06 10:02:40,241 | INFO     | extracted standard info from prmon json
[2025-06-06 12:02:54] 2025-06-06 10:02:40,241 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 12:02:54] 2025-06-06 10:02:40,241 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 12:02:54] 2025-06-06 10:02:40,242 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 12:02:54] 2025-06-06 10:02:40,242 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 12:02:54] 2025-06-06 10:02:40,243 | INFO     | fitting pss+swap vs Time
[2025-06-06 12:02:54] 2025-06-06 10:02:40,243 | INFO     | sum of square deviations: 2027639878.0
[2025-06-06 12:02:54] 2025-06-06 10:02:40,244 | INFO     | sum of deviations: 105789361508.0
[2025-06-06 12:02:54] 2025-06-06 10:02:40,244 | INFO     | mean x: 1749198428.0
[2025-06-06 12:02:54] 2025-06-06 10:02:40,244 | INFO     | mean y: 2220543.0695187165
[2025-06-06 12:02:54] 2025-06-06 10:02:40,244 | INFO     | -- intersect: -91259835829.30832
[2025-06-06 12:02:54] 2025-06-06 10:02:40,244 | INFO     | intersect: -91259835829.30832
[2025-06-06 12:02:54] 2025-06-06 10:02:40,244 | INFO     | chi2: 2.1670300349663245
[2025-06-06 12:02:54] 2025-06-06 10:02:40,244 | INFO     | sum of square deviations: 1869302025.5
[2025-06-06 12:02:54] 2025-06-06 10:02:40,245 | INFO     | sum of deviations: 102042097317.50002
[2025-06-06 12:02:54] 2025-06-06 10:02:40,245 | INFO     | mean x: 1749198275.5
[2025-06-06 12:02:54] 2025-06-06 10:02:40,245 | INFO     | mean y: 2216933.763736264
[2025-06-06 12:02:54] 2025-06-06 10:02:40,245 | INFO     | -- intersect: -95483615864.40665
[2025-06-06 12:02:54] 2025-06-06 10:02:40,245 | INFO     | intersect: -95483615864.40665
[2025-06-06 12:02:54] 2025-06-06 10:02:40,245 | INFO     | chi2: 2.1484703530905627
[2025-06-06 12:02:54] 2025-06-06 10:02:40,245 | INFO     | current chi2=2.1484703530905627 (change=0.8564570668744912 %)
[2025-06-06 12:02:54] 2025-06-06 10:02:40,245 | INFO     | right removable region: 181
[2025-06-06 12:02:54] 2025-06-06 10:02:40,245 | INFO     | sum of square deviations: 1869302025.5
[2025-06-06 12:02:54] 2025-06-06 10:02:40,246 | INFO     | sum of deviations: 70890702687.00002
[2025-06-06 12:02:54] 2025-06-06 10:02:40,246 | INFO     | mean x: 1749198580.5
[2025-06-06 12:02:54] 2025-06-06 10:02:40,246 | INFO     | mean y: 2253991.967032967
[2025-06-06 12:02:54] 2025-06-06 10:02:40,246 | INFO     | -- intersect: -66333691092.979836
[2025-06-06 12:02:54] 2025-06-06 10:02:40,246 | INFO     | intersect: -66333691092.979836
[2025-06-06 12:02:54] 2025-06-06 10:02:40,246 | INFO     | chi2: 0.5538631261975078
[2025-06-06 12:02:54] 2025-06-06 10:02:40,246 | INFO     | current chi2=0.5538631261975078 (change=74.4413728808279 %)
[2025-06-06 12:02:54] 2025-06-06 10:02:40,246 | INFO     | sum of square deviations: 1719429448.0
[2025-06-06 12:02:54] 2025-06-06 10:02:40,247 | INFO     | sum of deviations: 61633747605.00001
[2025-06-06 12:02:54] 2025-06-06 10:02:40,247 | INFO     | mean x: 1749198733.0
[2025-06-06 12:02:54] 2025-06-06 10:02:40,247 | INFO     | mean y: 2263345.175141243
[2025-06-06 12:02:54] 2025-06-06 10:02:40,247 | INFO     | -- intersect: -62698578114.82747
[2025-06-06 12:02:54] 2025-06-06 10:02:40,247 | INFO     | intersect: -62698578114.82747
[2025-06-06 12:02:54] 2025-06-06 10:02:40,247 | INFO     | chi2: 0.4957318552804345
[2025-06-06 12:02:54] 2025-06-06 10:02:40,247 | INFO     | current chi2=0.4957318552804345 (change=10.4956022828542 %)
[2025-06-06 12:02:54] 2025-06-06 10:02:40,247 | INFO     | left removable region: 20
[2025-06-06 12:02:54] 2025-06-06 10:02:40,247 | INFO     | sum of square deviations: 1294014960.0
[2025-06-06 12:02:54] 2025-06-06 10:02:40,248 | INFO     | sum of deviations: 52557120966.99999
[2025-06-06 12:02:54] 2025-06-06 10:02:40,248 | INFO     | mean x: 1749198855.0
[2025-06-06 12:02:54] 2025-06-06 10:02:40,248 | INFO     | mean y: 2267691.4782608696
[2025-06-06 12:02:54] 2025-06-06 10:02:40,248 | INFO     | -- intersect: -71042394587.83023
[2025-06-06 12:02:54] 2025-06-06 10:02:40,248 | INFO     | intersect: -71042394587.83023
[2025-06-06 12:02:54] 2025-06-06 10:02:40,248 | INFO     | chi2: 0.4624390710993995
[2025-06-06 12:02:54] 2025-06-06 10:02:40,248 | INFO     | -- intersect: -71042394587.83023
[2025-06-06 12:02:54] 2025-06-06 10:02:40,248 | INFO     | current memory leak: 40.62 B/s (using 161 data points, chi2=0.46)
[2025-06-06 12:02:54] 2025-06-06 10:02:40,248 | INFO     | ..............................
[2025-06-06 12:02:54] 2025-06-06 10:02:40,248 | INFO     | . Timing measurements:
[2025-06-06 12:02:54] 2025-06-06 10:02:40,248 | INFO     | . get job = 0 s
[2025-06-06 12:02:54] 2025-06-06 10:02:40,248 | INFO     | . initial setup = 2 s
[2025-06-06 12:02:54] 2025-06-06 10:02:40,248 | INFO     | . payload setup = 3 s
[2025-06-06 12:02:54] 2025-06-06 10:02:40,248 | INFO     | . stage-in = 0 s
[2025-06-06 12:02:54] 2025-06-06 10:02:40,248 | INFO     | . payload execution = 11399 s
[2025-06-06 12:02:54] 2025-06-06 10:02:40,248 | INFO     | . stage-out = 0 s
[2025-06-06 12:02:54] 2025-06-06 10:02:40,248 | INFO     | . log creation = 0 s
[2025-06-06 12:02:54] 2025-06-06 10:02:40,249 | INFO     | ..............................
[2025-06-06 12:02:54] 2025-06-06 10:02:40,559 | INFO     | 
[2025-06-06 12:02:54] 2025-06-06 10:02:40,559 | INFO     | job summary report
[2025-06-06 12:02:54] 2025-06-06 10:02:40,559 | INFO     | --------------------------------------------------
[2025-06-06 12:02:54] 2025-06-06 10:02:40,559 | INFO     | PanDA job id: 6668990480
[2025-06-06 12:02:54] 2025-06-06 10:02:40,559 | INFO     | task id: 44871837
[2025-06-06 12:02:54] 2025-06-06 10:02:40,559 | INFO     | errors: (none)
[2025-06-06 12:02:54] 2025-06-06 10:02:40,560 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 12:02:54] 2025-06-06 10:02:40,560 | INFO     | pilot state: finished 
[2025-06-06 12:02:54] 2025-06-06 10:02:40,560 | INFO     | transexitcode: 0
[2025-06-06 12:02:54] 2025-06-06 10:02:40,560 | INFO     | exeerrorcode: 0
[2025-06-06 12:02:54] 2025-06-06 10:02:40,560 | INFO     | exeerrordiag: 
[2025-06-06 12:02:54] 2025-06-06 10:02:40,560 | INFO     | exitcode: 0
[2025-06-06 12:02:54] 2025-06-06 10:02:40,560 | INFO     | exitmsg: OK
[2025-06-06 12:02:54] 2025-06-06 10:02:40,560 | INFO     | cpuconsumptiontime: 33707 s
[2025-06-06 12:02:54] 2025-06-06 10:02:40,560 | INFO     | nevents: 400
[2025-06-06 12:02:54] 2025-06-06 10:02:40,560 | INFO     | neventsw: 0
[2025-06-06 12:02:54] 2025-06-06 10:02:40,560 | INFO     | pid: 1595741
[2025-06-06 12:02:54] 2025-06-06 10:02:40,560 | INFO     | pgrp: 1595741
[2025-06-06 12:02:54] 2025-06-06 10:02:40,560 | INFO     | corecount: 4
[2025-06-06 12:02:54] 2025-06-06 10:02:40,560 | INFO     | event service: False
[2025-06-06 12:02:54] 2025-06-06 10:02:40,560 | INFO     | sizes: {0: 2397399, 2: 2397605, 10: 2397633, 11406: 2426861, 11407: 2426860, 11408: 2435871, 11409: 2436055, 11411: 2436225}
[2025-06-06 12:02:54] 2025-06-06 10:02:40,560 | INFO     | --------------------------------------------------
[2025-06-06 12:02:54] 2025-06-06 10:02:40,560 | INFO     | 
[2025-06-06 12:02:54] 2025-06-06 10:02:40,560 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-06-06 12:02:54] 2025-06-06 10:02:40,572 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 12:02:54] 2025-06-06 10:02:40,573 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 12:02:54] 2025-06-06 10:02:40,573 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 12:02:54] 2025-06-06 10:02:40,573 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 12:02:54] 2025-06-06 10:02:40,573 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 12:02:54] 2025-06-06 10:02:40,573 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 12:02:54] 2025-06-06 10:02:40,573 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 12:02:54] 2025-06-06 10:02:40,573 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 12:02:54] 2025-06-06 10:02:40,573 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 12:02:54] 2025-06-06 10:02:40,573 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 12:02:54] 2025-06-06 10:02:40,573 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 12:02:54] 2025-06-06 10:02:40,573 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 12:02:54] 2025-06-06 10:02:40,573 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 12:02:54] 2025-06-06 10:02:40,573 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 12:02:54] 2025-06-06 10:02:40,573 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 12:02:54] 2025-06-06 10:02:40,573 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 12:02:54] 2025-06-06 10:02:40,573 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 12:02:54] 2025-06-06 10:02:40,573 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 12:02:54] 2025-06-06 10:02:40,573 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 12:02:54] 2025-06-06 10:02:40,573 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 12:02:54] 2025-06-06 10:02:40,573 | INFO     | job 6668990480 has completed (purged errors)
[2025-06-06 12:02:54] 2025-06-06 10:02:40,573 | INFO     | overall cleanup function is called
[2025-06-06 12:02:54] 2025-06-06 10:02:41,580 | INFO     | --- collectZombieJob: --- 10, [1595741]
[2025-06-06 12:02:54] 2025-06-06 10:02:41,580 | INFO     | zombie collector waiting for pid 1595741
[2025-06-06 12:02:54] 2025-06-06 10:02:41,580 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 12:02:54] 2025-06-06 10:02:41,580 | INFO     | collected zombie processes
[2025-06-06 12:02:54] 2025-06-06 10:02:41,580 | INFO     | will attempt to kill all subprocesses of pid=1595741
[2025-06-06 12:02:54] 2025-06-06 10:02:41,661 | INFO     | process IDs to be killed: [1595741] (in reverse order)
[2025-06-06 12:02:54] 2025-06-06 10:02:41,698 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 12:02:54] 2025-06-06 10:02:41,698 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 12:02:54] 2025-06-06 10:02:41,701 | INFO     | did not find any defunct processes belonging to 1595741
[2025-06-06 12:02:54] 2025-06-06 10:02:41,703 | INFO     | did not find any defunct processes belonging to 1595741
[2025-06-06 12:02:54] 2025-06-06 10:02:41,703 | INFO     | ready for new job
[2025-06-06 12:02:54] 2025-06-06 10:02:41,703 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 12:02:54] 2025-06-06 10:02:41,704 | INFO     | **************************************
[2025-06-06 12:02:54] 2025-06-06 10:02:41,704 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 12:02:54] 2025-06-06 10:02:41,704 | INFO     | **************************************
[2025-06-06 12:02:54] 2025-06-06 10:02:41,704 | INFO     | 
[2025-06-06 12:02:54] 2025-06-06 10:02:41,705 | INFO     | architecture information:
[2025-06-06 12:02:54] 2025-06-06 10:02:41,705 | INFO     | executing command: cat /etc/os-release
[2025-06-06 12:02:54] 2025-06-06 10:02:41,714 | INFO     | cat /etc/os-release:
[2025-06-06 12:02:54] NAME="CentOS Linux"
[2025-06-06 12:02:54] VERSION="7 (Core)"
[2025-06-06 12:02:54] ID="centos"
[2025-06-06 12:02:54] ID_LIKE="rhel fedora"
[2025-06-06 12:02:54] VERSION_ID="7"
[2025-06-06 12:02:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 12:02:54] ANSI_COLOR="0;31"
[2025-06-06 12:02:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 12:02:54] HOME_URL="https://www.centos.org/"
[2025-06-06 12:02:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 12:02:54] 
[2025-06-06 12:02:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 12:02:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 12:02:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 12:02:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 12:02:54] 
[2025-06-06 12:02:54] 2025-06-06 10:02:41,714 | INFO     | **************************************
[2025-06-06 12:02:54] 2025-06-06 10:02:42,217 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-06-06 12:02:54] 2025-06-06 10:02:42,229 | INFO     | sufficient remaining disk space (630129164288 B)
[2025-06-06 12:02:54] 2025-06-06 10:02:42,229 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 12:02:54] 2025-06-06 10:02:42,229 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 12:02:54] 2025-06-06 10:02:42,230 | INFO     | update_server=False
[2025-06-06 12:02:54] 2025-06-06 10:02:42,230 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 12:02:54] 2025-06-06 10:02:42,230 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 12:02:54] 2025-06-06 10:02:42,283 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 12:02:54] 2025-06-06 10:02:42,284 | INFO     | aborting loop
[2025-06-06 12:02:54] 2025-06-06 10:02:42,504 | INFO     | PID=1589110 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-06 12:02:54] 2025-06-06 10:02:42,504 | INFO     | .. there are 5 such processes running
[2025-06-06 12:02:54] 2025-06-06 10:02:42,504 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 12:02:54] 2025-06-06 10:02:42,504 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 12:02:54] 2025-06-06 10:02:42,504 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 12:02:54] 2025-06-06 10:02:42,727 | INFO     | all job control threads have been joined
[2025-06-06 12:02:54] 2025-06-06 10:02:42,799 | INFO     | all data control threads have been joined
[2025-06-06 12:02:54] 2025-06-06 10:02:42,849 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 12:02:54] 2025-06-06 10:02:43,231 | INFO     | [job] retrieve thread has finished
[2025-06-06 12:02:54] 2025-06-06 10:02:43,234 | INFO     | [job] queue monitor thread has finished
[2025-06-06 12:02:54] 2025-06-06 10:02:43,241 | INFO     | [job] validate thread has finished
[2025-06-06 12:02:54] 2025-06-06 10:02:43,289 | INFO     | [job] job monitor thread has finished
[2025-06-06 12:02:54] 2025-06-06 10:02:43,297 | INFO     | [payload] validate_post thread has finished
[2025-06-06 12:02:54] 2025-06-06 10:02:43,305 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 12:02:54] 2025-06-06 10:02:43,531 | INFO     | all payload control threads have been joined
[2025-06-06 12:02:54] 2025-06-06 10:02:43,732 | INFO     | [job] control thread has finished
[2025-06-06 12:02:54] 2025-06-06 10:02:43,790 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 12:02:54] 2025-06-06 10:02:43,804 | INFO     | [data] control thread has finished
[2025-06-06 12:02:54] 2025-06-06 10:02:43,913 | INFO     | [data] copytool_in thread has finished
[2025-06-06 12:02:54] 2025-06-06 10:02:44,008 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 12:02:54] 2025-06-06 10:02:44,289 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 12:02:54] 2025-06-06 10:02:44,474 | INFO     | [payload] failed_post thread has finished
[2025-06-06 12:02:54] 2025-06-06 10:02:44,536 | INFO     | [payload] control thread has finished
[2025-06-06 12:02:54] 2025-06-06 10:02:44,665 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 12:02:54] 2025-06-06 10:02:44,855 | INFO     | [data] copytool_out thread has finished
[2025-06-06 12:02:54] 2025-06-06 10:02:48,014 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 12:02:54] 2025-06-06 10:02:49,148 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133472709457728)>', '<ExcThread(monitor, started 133471871690496)>']
[2025-06-06 12:02:54] 2025-06-06 10:02:49,536 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 12:02:54] 2025-06-06 10:02:49,536 | INFO     | [monitor] control thread has ended
[2025-06-06 12:02:54] 2025-06-06 10:02:54,173 | INFO     | all workflow threads have been joined
[2025-06-06 12:02:54] 2025-06-06 10:02:54,173 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 12:02:54] 2025-06-06 10:02:54,173 | INFO     | traces error code: 0
[2025-06-06 12:02:54] 2025-06-06 10:02:54,173 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 12:02:54] 2025-06-06 10:02:54,237 [wrapper] ==== pilot stdout END ====
[2025-06-06 12:02:54] 2025-06-06 10:02:54,239 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 12:02:54] 2025-06-06 10:02:54,240 [wrapper] pilotpid: 1589110
[2025-06-06 12:02:54] 2025-06-06 10:02:54,241 [wrapper] Pilot exit status: 0
[2025-06-06 12:02:54] 2025-06-06 10:02:54,247 [wrapper] pandaids: 6668990480
[2025-06-06 12:02:54] 2025-06-06 10:02:54,268 [wrapper] cleanup supervisor_pilot 1733547 1589111
[2025-06-06 12:02:54] 2025-06-06 10:02:54,270 [wrapper] Test setup, not cleaning
[2025-06-06 12:02:54] 2025-06-06 10:02:54,272 [wrapper] apfmon messages muted
[2025-06-06 12:02:54] 2025-06-06 10:02:54,273 [wrapper] ==== wrapper stdout END ====
[2025-06-06 12:02:54] 2025-06-06 10:02:54,275 [wrapper] ==== wrapper stderr END ====
[2025-06-06 12:02:54]  *** Error codes and diagnostics ***
[2025-06-06 12:02:54]     "exeErrorCode": 0,
[2025-06-06 12:02:54]     "exeErrorDiag": "",
[2025-06-06 12:02:54]     "pilotErrorCode": 0,
[2025-06-06 12:02:54]     "pilotErrorDiag": "",
[2025-06-06 12:02:54]  *** Listing of results directory ***
[2025-06-06 12:02:54] insgesamt 416428
[2025-06-06 12:02:54] -rw-r--r-- 1 boinc boinc    495897 Mai 29 01:19 pilot3.tar.gz
[2025-06-06 12:02:54] -rw-r--r-- 1 boinc boinc      5111 Mai 29 01:55 queuedata.json
[2025-06-06 12:02:54] -rwx------ 1 boinc boinc     37140 Mai 29 01:55 runpilot2-wrapper.sh
[2025-06-06 12:02:54] -rw-r--r-- 1 boinc boinc       100 Jun  6 08:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 12:02:54] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 08:52 run_atlas
[2025-06-06 12:02:54] -rw-r--r-- 1 boinc boinc       105 Jun  6 08:52 job.xml
[2025-06-06 12:02:54] -rw-r--r-- 1 boinc boinc      9253 Jun  6 08:52 init_data.xml
[2025-06-06 12:02:54] -rw-r--r-- 2 boinc boinc 224216702 Jun  6 08:52 EVNT.44871834._003581.pool.root.1
[2025-06-06 12:02:54] -rw-r--r-- 2 boinc boinc     15093 Jun  6 08:52 start_atlas.sh
[2025-06-06 12:02:54] drwxrwx--x 2 boinc boinc      4096 Jun  6 08:52 shared
[2025-06-06 12:02:54] -rw-r--r-- 2 boinc boinc    508884 Jun  6 08:52 input.tar.gz
[2025-06-06 12:02:54] -rw-r--r-- 1 boinc boinc         0 Jun  6 08:52 boinc_lockfile
[2025-06-06 12:02:54] -rw-r--r-- 1 boinc boinc      2559 Jun  6 08:52 pandaJob.out
[2025-06-06 12:02:54] -rw------- 1 boinc boinc    988117 Jun  6 08:52 agis_schedconf.cvmfs.json
[2025-06-06 12:02:54] drwx------ 4 boinc boinc      4096 Jun  6 08:52 pilot3
[2025-06-06 12:02:54] -rw------- 1 boinc boinc        95 Jun  6 12:01 pilot_heartbeat.json
[2025-06-06 12:02:54] -rw------- 1 boinc boinc 195575777 Jun  6 12:02 HITS.44871837._092073.pool.root.1
[2025-06-06 12:02:54] -rw-r--r-- 1 boinc boinc       530 Jun  6 12:02 boinc_task_state.xml
[2025-06-06 12:02:54] -rw------- 1 boinc boinc      1026 Jun  6 12:02 memory_monitor_summary.json
[2025-06-06 12:02:54] -rw------- 1 boinc boinc   1598969 Jun  6 12:02 agis_ddmendpoints.agis.ALL.json
[2025-06-06 12:02:54] -rw------- 1 boinc boinc    299620 Jun  6 12:02 log.44871837._092073.job.log.tgz.1
[2025-06-06 12:02:54] -rw-r--r-- 1 boinc boinc        28 Jun  6 12:02 wrapper_checkpoint.txt
[2025-06-06 12:02:54] -rw------- 1 boinc boinc      7661 Jun  6 12:02 heartbeat.json
[2025-06-06 12:02:54] -rw-r--r-- 1 boinc boinc      8192 Jun  6 12:02 boinc_mmap_file
[2025-06-06 12:02:54] -rw------- 1 boinc boinc      4755 Jun  6 12:02 pilotlog.txt
[2025-06-06 12:02:54] -rw------- 1 boinc boinc   1096772 Jun  6 12:02 log.44871837._092073.job.log.1
[2025-06-06 12:02:54] -rw------- 1 boinc boinc       357 Jun  6 12:02 output.list
[2025-06-06 12:02:54] -rw-r--r-- 1 boinc boinc       620 Jun  6 12:02 runtime_log
[2025-06-06 12:02:54] -rw------- 1 boinc boinc   1413120 Jun  6 12:02 result.tar.gz
[2025-06-06 12:02:54] -rw------- 1 boinc boinc       639 Jun  6 12:02 xcuMDmVnfe7n9Rq4apOajLDm4fhM0noT9bVof3QYDm1JUKDmsxOpEm.diag
[2025-06-06 12:02:54] -rw-r--r-- 1 boinc boinc      8688 Jun  6 12:02 runtime_log.err
[2025-06-06 12:02:54] -rw-r--r-- 1 boinc boinc     21293 Jun  6 12:02 stderr.txt
[2025-06-06 12:02:54] HITS file was successfully produced:
[2025-06-06 12:02:54] -rw------- 1 boinc boinc 195575777 Jun  6 12:02 shared/HITS.pool.root.1
[2025-06-06 12:02:54]  *** Contents of shared directory: ***
[2025-06-06 12:02:54] insgesamt 411860
[2025-06-06 12:02:54] -rw-r--r-- 2 boinc boinc 224216702 Jun  6 08:52 ATLAS.root_0
[2025-06-06 12:02:54] -rw-r--r-- 2 boinc boinc     15093 Jun  6 08:52 start_atlas.sh
[2025-06-06 12:02:54] -rw-r--r-- 2 boinc boinc    508884 Jun  6 08:52 input.tar.gz
[2025-06-06 12:02:54] -rw------- 1 boinc boinc 195575777 Jun  6 12:02 HITS.pool.root.1
[2025-06-06 12:02:54] -rw------- 1 boinc boinc   1413120 Jun  6 12:02 result.tar.gz
12:02:55 (1585405): run_atlas exited; CPU time 33807.413986
12:02:55 (1585405): called boinc_finish(0)

</stderr_txt>
]]>

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