Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:43:11 (3108371): wrapper (7.7.26015): starting
02:43:11 (3108371): wrapper: running run_atlas (--nthreads 8)
[2025-06-06 02:43:11] Arguments: --nthreads 8
[2025-06-06 02:43:11] Threads: 8
[2025-06-06 02:43:11] Checking for CVMFS
[2025-06-06 02:43:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 02:43:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 02:43:11] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 02:43:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 02:43:12] 2.12.6.0 4471 39849 548920 146846 3 349 24611330 32935936 10283 16776704 0 166326051 99.563 199064000 27970 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-06 02:43:12] CVMFS is ok
[2025-06-06 02:43:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 02:43:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 02:43:12] Further information can be found at the LHC@home message board.
[2025-06-06 02:43:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 02:43:12] Checking for apptainer binary...
[2025-06-06 02:43:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 02:43:12] Running /usr/bin/apptainer --version
[2025-06-06 02:43:12] apptainer version 1.4.1-1.el9
[2025-06-06 02:43:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 02:43:12] c7-11-13.aglt2.org
[2025-06-06 02:43:12] apptainer works
[2025-06-06 02:43:12] Set ATHENA_PROC_NUMBER=8
[2025-06-06 02:43:12] Set ATHENA_CORE_NUMBER=8
[2025-06-06 02:43:12] Starting ATLAS job with PandaID=6681769687
[2025-06-06 02:43:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 03:45:33]  *** The last 200 lines of the pilot log: ***
[2025-06-06 03:45:33]  status_code=0
[2025-06-06 03:45:33]  storage_token=
[2025-06-06 03:45:33]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6681769687/log.45006595._057137.job.log.tgz.1
[2025-06-06 03:45:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d8/22/log.45006595._057137.job.log.tgz.1
[2025-06-06 03:45:33]  workdir=None
[2025-06-06 03:45:33] ]
[2025-06-06 03:45:33] 2025-06-06 07:44:54,727 | INFO     | transferring file log.45006595._057137.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6681769687/log.45006595._057137.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-06 03:45:33] 2025-06-06 07:44:54,727 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6681769687/log.45006595._057137.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._057137.job
[2025-06-06 03:45:33] 2025-06-06 07:44:54,742 | INFO     | adding to output.list: log.45006595._057137.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d8/22/log.45006595._057137.job.log.tg
[2025-06-06 03:45:33] 2025-06-06 07:44:54,742 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 03:45:33] 2025-06-06 07:44:54,742 | INFO     | summary of transferred files:
[2025-06-06 03:45:33] 2025-06-06 07:44:54,742 | INFO     |  -- lfn=log.45006595._057137.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 03:45:33] 2025-06-06 07:44:54,742 | INFO     | stage-out finished correctly
[2025-06-06 03:45:33] 2025-06-06 07:44:55,647 | WARNING  | process 3125248 can no longer be monitored (due to stat problems) - aborting
[2025-06-06 03:45:33] 2025-06-06 07:44:55,647 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6681769687/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 03:45:33] 2025-06-06 07:44:55,648 | INFO     | reaping zombies for max 20 seconds
[2025-06-06 03:45:33] 2025-06-06 07:44:55,661 | INFO     | checking for looping job (in state=finished)
[2025-06-06 03:45:33] 2025-06-06 07:44:55,661 | INFO     | using looping job limit: 7200 s
[2025-06-06 03:45:33] 2025-06-06 07:44:55,898 | INFO     | number of running child processes to parent process 3125248: 1
[2025-06-06 03:45:33] 2025-06-06 07:44:55,898 | INFO     | maximum number of monitored processes: 6
[2025-06-06 03:45:33] 2025-06-06 07:44:56,215 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 03:45:33] 2025-06-06 07:44:57,549 | INFO     | job 6681769687 has state=finished
[2025-06-06 03:45:33] 2025-06-06 07:44:57,549 | INFO     | preparing for final server update for job 6681769687 in state='finished'
[2025-06-06 03:45:33] 2025-06-06 07:44:57,549 | INFO     | this job has now completed (state=finished)
[2025-06-06 03:45:33] 2025-06-06 07:44:57,549 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 03:45:33] 2025-06-06 07:44:57,550 | INFO     | log transfer has been attempted: DONE
[2025-06-06 03:45:33] 2025-06-06 07:44:57,550 | INFO     | job 6681769687 has finished - writing final server update
[2025-06-06 03:45:33] 2025-06-06 07:44:57,550 | INFO     | total number of processed events: 400 (read)
[2025-06-06 03:45:33] 2025-06-06 07:44:57,550 | INFO     | executing command: lscpu
[2025-06-06 03:45:33] 2025-06-06 07:44:57,611 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 03:45:33] 2025-06-06 07:44:58,401 | INFO     | monitor loop #276: job 0:6681769687 is in state 'finished'
[2025-06-06 03:45:33] 2025-06-06 07:44:58,401 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 03:45:33] 2025-06-06 07:45:00,904 | INFO     | monitor loop #277: job 0:6681769687 is in state 'finished'
[2025-06-06 03:45:33] 2025-06-06 07:45:00,904 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 03:45:33] 2025-06-06 07:45:01,064 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 03:45:33] 2025-06-06 07:45:01,068 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3165.538499999999
[2025-06-06 03:45:33] 2025-06-06 07:45:01,078 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6681769687/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 03:45:33] 2025-06-06 07:45:01,078 | INFO     | extracted standard info from prmon json
[2025-06-06 03:45:33] 2025-06-06 07:45:01,078 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 03:45:33] 2025-06-06 07:45:01,078 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 03:45:33] 2025-06-06 07:45:01,079 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 03:45:33] 2025-06-06 07:45:01,079 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 03:45:33] 2025-06-06 07:45:01,080 | INFO     | fitting pss+swap vs Time
[2025-06-06 03:45:33] 2025-06-06 07:45:01,080 | INFO     | sum of square deviations: 46147842.0
[2025-06-06 03:45:33] 2025-06-06 07:45:01,080 | INFO     | sum of deviations: -8094775640.0
[2025-06-06 03:45:33] 2025-06-06 07:45:01,080 | INFO     | mean x: 1749194126.0
[2025-06-06 03:45:33] 2025-06-06 07:45:01,081 | INFO     | mean y: 2417908.9056603773
[2025-06-06 03:45:33] 2025-06-06 07:45:01,081 | INFO     | -- intersect: 306827902853.053
[2025-06-06 03:45:33] 2025-06-06 07:45:01,081 | INFO     | intersect: 306827902853.053
[2025-06-06 03:45:33] 2025-06-06 07:45:01,081 | INFO     | chi2: 0.11247521200879995
[2025-06-06 03:45:33] 2025-06-06 07:45:01,081 | INFO     | -- intersect: 306827902853.053
[2025-06-06 03:45:33] 2025-06-06 07:45:01,081 | INFO     | current memory leak: -175.41 B/s (using 53 data points, chi2=0.11)
[2025-06-06 03:45:33] 2025-06-06 07:45:01,081 | INFO     | could have reported an average CPU frequency of 3221 MHz (6 samples)
[2025-06-06 03:45:33] 2025-06-06 07:45:01,081 | INFO     | ..............................
[2025-06-06 03:45:33] 2025-06-06 07:45:01,081 | INFO     | . Timing measurements:
[2025-06-06 03:45:33] 2025-06-06 07:45:01,082 | INFO     | . get job = 0 s
[2025-06-06 03:45:33] 2025-06-06 07:45:01,082 | INFO     | . initial setup = 2 s
[2025-06-06 03:45:33] 2025-06-06 07:45:01,082 | INFO     | . payload setup = 9 s
[2025-06-06 03:45:33] 2025-06-06 07:45:01,082 | INFO     | . stage-in = 0 s
[2025-06-06 03:45:33] 2025-06-06 07:45:01,082 | INFO     | . payload execution = 3660 s
[2025-06-06 03:45:33] 2025-06-06 07:45:01,082 | INFO     | . stage-out = 0 s
[2025-06-06 03:45:33] 2025-06-06 07:45:01,082 | INFO     | . log creation = 0 s
[2025-06-06 03:45:33] 2025-06-06 07:45:01,082 | INFO     | ..............................
[2025-06-06 03:45:33] 2025-06-06 07:45:01,160 | INFO     | 
[2025-06-06 03:45:33] 2025-06-06 07:45:01,161 | INFO     | job summary report
[2025-06-06 03:45:33] 2025-06-06 07:45:01,161 | INFO     | --------------------------------------------------
[2025-06-06 03:45:33] 2025-06-06 07:45:01,161 | INFO     | PanDA job id: 6681769687
[2025-06-06 03:45:33] 2025-06-06 07:45:01,161 | INFO     | task id: 45006595
[2025-06-06 03:45:33] 2025-06-06 07:45:01,161 | INFO     | errors: (none)
[2025-06-06 03:45:33] 2025-06-06 07:45:01,161 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 03:45:33] 2025-06-06 07:45:01,161 | INFO     | pilot state: finished 
[2025-06-06 03:45:33] 2025-06-06 07:45:01,161 | INFO     | transexitcode: 0
[2025-06-06 03:45:33] 2025-06-06 07:45:01,161 | INFO     | exeerrorcode: 0
[2025-06-06 03:45:33] 2025-06-06 07:45:01,161 | INFO     | exeerrordiag: 
[2025-06-06 03:45:33] 2025-06-06 07:45:01,161 | INFO     | exitcode: 0
[2025-06-06 03:45:33] 2025-06-06 07:45:01,161 | INFO     | exitmsg: OK
[2025-06-06 03:45:33] 2025-06-06 07:45:01,161 | INFO     | cpuconsumptiontime: 26859 s
[2025-06-06 03:45:33] 2025-06-06 07:45:01,162 | INFO     | nevents: 400
[2025-06-06 03:45:33] 2025-06-06 07:45:01,162 | INFO     | neventsw: 0
[2025-06-06 03:45:33] 2025-06-06 07:45:01,162 | INFO     | pid: 3125248
[2025-06-06 03:45:33] 2025-06-06 07:45:01,162 | INFO     | pgrp: 3125248
[2025-06-06 03:45:33] 2025-06-06 07:45:01,162 | INFO     | corecount: 8
[2025-06-06 03:45:33] 2025-06-06 07:45:01,162 | INFO     | event service: False
[2025-06-06 03:45:33] 2025-06-06 07:45:01,162 | INFO     | sizes: {0: 2397628, 1: 2397628, 5: 2397918, 11: 2397974, 3673: 2423698, 3674: 2432639, 3675: 2432823, 3680: 2433017}
[2025-06-06 03:45:33] 2025-06-06 07:45:01,162 | INFO     | --------------------------------------------------
[2025-06-06 03:45:33] 2025-06-06 07:45:01,162 | INFO     | 
[2025-06-06 03:45:33] 2025-06-06 07:45:01,162 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 03:45:33] 2025-06-06 07:45:01,178 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 03:45:33] 2025-06-06 07:45:01,179 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 03:45:33] 2025-06-06 07:45:01,179 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 03:45:33] 2025-06-06 07:45:01,179 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 03:45:33] 2025-06-06 07:45:01,179 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 03:45:33] 2025-06-06 07:45:01,179 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 03:45:33] 2025-06-06 07:45:01,179 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 03:45:33] 2025-06-06 07:45:01,179 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 03:45:33] 2025-06-06 07:45:01,179 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 03:45:33] 2025-06-06 07:45:01,179 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 03:45:33] 2025-06-06 07:45:01,179 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 03:45:33] 2025-06-06 07:45:01,179 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 03:45:33] 2025-06-06 07:45:01,179 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 03:45:33] 2025-06-06 07:45:01,179 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 03:45:33] 2025-06-06 07:45:01,179 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 03:45:33] 2025-06-06 07:45:01,180 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 03:45:33] 2025-06-06 07:45:01,180 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 03:45:33] 2025-06-06 07:45:01,180 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 03:45:33] 2025-06-06 07:45:01,180 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 03:45:33] 2025-06-06 07:45:01,180 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 03:45:33] 2025-06-06 07:45:01,180 | INFO     | job 6681769687 has completed (purged errors)
[2025-06-06 03:45:33] 2025-06-06 07:45:01,180 | INFO     | overall cleanup function is called
[2025-06-06 03:45:33] 2025-06-06 07:45:02,188 | INFO     | --- collectZombieJob: --- 10, [3125248]
[2025-06-06 03:45:33] 2025-06-06 07:45:02,188 | INFO     | zombie collector waiting for pid 3125248
[2025-06-06 03:45:33] 2025-06-06 07:45:02,188 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 03:45:33] 2025-06-06 07:45:02,188 | INFO     | collected zombie processes
[2025-06-06 03:45:33] 2025-06-06 07:45:02,188 | INFO     | will attempt to kill all subprocesses of pid=3125248
[2025-06-06 03:45:33] 2025-06-06 07:45:02,418 | INFO     | process IDs to be killed: [3125248] (in reverse order)
[2025-06-06 03:45:33] 2025-06-06 07:45:02,511 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 03:45:33] 2025-06-06 07:45:02,511 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 03:45:33] 2025-06-06 07:45:02,524 | INFO     | did not find any defunct processes belonging to 3125248
[2025-06-06 03:45:33] 2025-06-06 07:45:02,535 | INFO     | did not find any defunct processes belonging to 3125248
[2025-06-06 03:45:33] 2025-06-06 07:45:02,536 | INFO     | ready for new job
[2025-06-06 03:45:33] 2025-06-06 07:45:02,536 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 03:45:33] 2025-06-06 07:45:02,537 | INFO     | ***************************************
[2025-06-06 03:45:33] 2025-06-06 07:45:02,537 | INFO     | ***  PanDA Pilot version 3.10.3.82  ***
[2025-06-06 03:45:33] 2025-06-06 07:45:02,537 | INFO     | ***************************************
[2025-06-06 03:45:33] 2025-06-06 07:45:02,537 | INFO     | 
[2025-06-06 03:45:33] 2025-06-06 07:45:02,553 | INFO     | architecture information:
[2025-06-06 03:45:33] 2025-06-06 07:45:02,553 | INFO     | executing command: cat /etc/os-release
[2025-06-06 03:45:33] 2025-06-06 07:45:02,564 | INFO     | cat /etc/os-release:
[2025-06-06 03:45:33] NAME="CentOS Linux"
[2025-06-06 03:45:33] VERSION="7 (Core)"
[2025-06-06 03:45:33] ID="centos"
[2025-06-06 03:45:33] ID_LIKE="rhel fedora"
[2025-06-06 03:45:33] VERSION_ID="7"
[2025-06-06 03:45:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 03:45:33] ANSI_COLOR="0;31"
[2025-06-06 03:45:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 03:45:33] HOME_URL="https://www.centos.org/"
[2025-06-06 03:45:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 03:45:33] 
[2025-06-06 03:45:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 03:45:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 03:45:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 03:45:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 03:45:33] 
[2025-06-06 03:45:33] 2025-06-06 07:45:02,564 | INFO     | ***************************************
[2025-06-06 03:45:33] 2025-06-06 07:45:03,067 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 03:45:33] 2025-06-06 07:45:03,083 | INFO     | sufficient remaining disk space (96702824448 B)
[2025-06-06 03:45:33] 2025-06-06 07:45:03,084 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 03:45:33] 2025-06-06 07:45:03,084 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 03:45:33] 2025-06-06 07:45:03,084 | INFO     | update_server=False
[2025-06-06 03:45:33] 2025-06-06 07:45:03,084 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 03:45:33] 2025-06-06 07:45:03,084 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 03:45:33] 2025-06-06 07:45:03,085 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 03:45:33] 2025-06-06 07:45:03,085 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 03:45:33] 2025-06-06 07:45:03,163 | INFO     | all data control threads have been joined
[2025-06-06 03:45:33] 2025-06-06 07:45:03,407 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 03:45:33] 2025-06-06 07:45:03,407 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 03:45:33] 2025-06-06 07:45:03,407 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 03:45:33] 2025-06-06 07:45:03,407 | INFO     | will abort loop
[2025-06-06 03:45:33] 2025-06-06 07:45:04,089 | INFO     | [job] retrieve thread has finished
[2025-06-06 03:45:33] 2025-06-06 07:45:04,090 | INFO     | [job] queue monitor thread has finished
[2025-06-06 03:45:33] 2025-06-06 07:45:04,147 | INFO     | all payload control threads have been joined
[2025-06-06 03:45:33] 2025-06-06 07:45:04,168 | INFO     | [data] control thread has finished
[2025-06-06 03:45:33] 2025-06-06 07:45:04,186 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 03:45:33] 2025-06-06 07:45:04,225 | INFO     | all job control threads have been joined
[2025-06-06 03:45:33] 2025-06-06 07:45:04,413 | INFO     | [job] job monitor thread has finished
[2025-06-06 03:45:33] 2025-06-06 07:45:04,862 | INFO     | [payload] validate_post thread has finished
[2025-06-06 03:45:33] 2025-06-06 07:45:04,993 | INFO     | [job] validate thread has finished
[2025-06-06 03:45:33] 2025-06-06 07:45:05,090 | INFO     | [data] copytool_out thread has finished
[2025-06-06 03:45:33] 2025-06-06 07:45:05,136 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 03:45:33] 2025-06-06 07:45:05,153 | INFO     | [payload] control thread has finished
[2025-06-06 03:45:33] 2025-06-06 07:45:05,169 | INFO     | [payload] failed_post thread has finished
[2025-06-06 03:45:33] 2025-06-06 07:45:05,216 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 03:45:33] 2025-06-06 07:45:05,230 | INFO     | [job] control thread has finished
[2025-06-06 03:45:33] 2025-06-06 07:45:05,541 | INFO     | [data] copytool_in thread has finished
[2025-06-06 03:45:33] 2025-06-06 07:45:07,091 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 03:45:33] 2025-06-06 07:45:13,888 | INFO     | job.realtimelogging is not enabled
[2025-06-06 03:45:33] 2025-06-06 07:45:14,893 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 03:45:33] 2025-06-06 07:45:15,907 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139852006684480)>', '<ExcThread(monitor, started 139851240302336)>']
[2025-06-06 03:45:33] 2025-06-06 07:45:20,915 | INFO     | all workflow threads have been joined
[2025-06-06 03:45:33] 2025-06-06 07:45:20,917 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 03:45:33] 2025-06-06 07:45:20,917 | INFO     | traces error code: 0
[2025-06-06 03:45:33] 2025-06-06 07:45:20,917 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 03:45:33] 2025-06-06 07:45:33,593 | INFO     | PID=3114198 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-06 03:45:33] 2025-06-06 07:45:33,594 | INFO     | .. there are 9 such processes running
[2025-06-06 03:45:33] 2025-06-06 07:45:33,594 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 03:45:33] 2025-06-06 07:45:33,594 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 03:45:33] 2025-06-06 07:45:33,594 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 03:45:33] 2025-06-06 07:45:33,594 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 03:45:33] 2025-06-06 07:45:33,594 | INFO     | [monitor] control thread has ended
[2025-06-06 03:45:33] 2025-06-06 07:45:33,676 [wrapper] ==== pilot stdout END ====
[2025-06-06 03:45:33] 2025-06-06 07:45:33,679 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 03:45:33] 2025-06-06 07:45:33,681 [wrapper] pilotpid: 3114198
[2025-06-06 03:45:33] 2025-06-06 07:45:33,683 [wrapper] Pilot exit status: 0
[2025-06-06 03:45:33] 2025-06-06 07:45:33,692 [wrapper] pandaids: 6681769687
[2025-06-06 03:45:33] 2025-06-06 07:45:33,756 [wrapper] cleanup supervisor_pilot 3608428 3114199
[2025-06-06 03:45:33] 2025-06-06 07:45:33,759 [wrapper] Test setup, not cleaning
[2025-06-06 03:45:33] 2025-06-06 07:45:33,762 [wrapper] apfmon messages muted
[2025-06-06 03:45:33] 2025-06-06 07:45:33,765 [wrapper] ==== wrapper stdout END ====
[2025-06-06 03:45:33] 2025-06-06 07:45:33,767 [wrapper] ==== wrapper stderr END ====
[2025-06-06 03:45:33]  *** Error codes and diagnostics ***
[2025-06-06 03:45:33]     "exeErrorCode": 0,
[2025-06-06 03:45:33]     "exeErrorDiag": "",
[2025-06-06 03:45:33]     "pilotErrorCode": 0,
[2025-06-06 03:45:33]     "pilotErrorDiag": "",
[2025-06-06 03:45:33]  *** Listing of results directory ***
[2025-06-06 03:45:33] total 392368
[2025-06-06 03:45:33] -rw-r--r--. 1 boincer umatlas    529402 Jun  6 02:23 pilot3.tar.gz
[2025-06-06 03:45:33] -rwx------. 1 boincer umatlas     37140 Jun  6 02:42 runpilot2-wrapper.sh
[2025-06-06 03:45:33] -rw-r--r--. 1 boincer umatlas      5112 Jun  6 02:42 queuedata.json
[2025-06-06 03:45:33] -rw-r--r--. 1 boincer umatlas       100 Jun  6 02:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 03:45:33] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  6 02:43 run_atlas
[2025-06-06 03:45:33] -rw-r--r--. 1 boincer umatlas       105 Jun  6 02:43 job.xml
[2025-06-06 03:45:33] -rw-r--r--. 2 boincer umatlas 214008482 Jun  6 02:43 EVNT.45006593._000818.pool.root.1
[2025-06-06 03:45:33] -rw-r--r--. 2 boincer umatlas     15095 Jun  6 02:43 start_atlas.sh
[2025-06-06 03:45:33] drwxrwx--x. 2 boincer umatlas      4096 Jun  6 02:43 shared
[2025-06-06 03:45:33] -rw-r--r--. 2 boincer umatlas    541906 Jun  6 02:43 input.tar.gz
[2025-06-06 03:45:33] -rw-r--r--. 1 boincer umatlas         0 Jun  6 02:43 boinc_lockfile
[2025-06-06 03:45:33] -rw-r--r--. 1 boincer umatlas      2522 Jun  6 02:43 pandaJob.out
[2025-06-06 03:45:33] -rw-------. 1 boincer umatlas    988117 Jun  6 02:43 agis_schedconf.cvmfs.json
[2025-06-06 03:45:33] -rw-------. 1 boincer umatlas   1598969 Jun  6 02:43 agis_ddmendpoints.agis.ALL.json
[2025-06-06 03:45:33] drwx------. 4 boincer umatlas      4096 Jun  6 02:43 pilot3
[2025-06-06 03:45:33] -rw-r--r--. 1 boincer umatlas      6897 Jun  6 03:40 init_data.xml
[2025-06-06 03:45:33] -rw-------. 1 boincer umatlas 182550104 Jun  6 03:44 HITS.45006595._057137.pool.root.1
[2025-06-06 03:45:33] -rw-r--r--. 1 boincer umatlas       529 Jun  6 03:44 boinc_task_state.xml
[2025-06-06 03:45:33] -rw-------. 1 boincer umatlas        95 Jun  6 03:44 pilot_heartbeat.json
[2025-06-06 03:45:33] -rw-------. 1 boincer umatlas      1031 Jun  6 03:44 memory_monitor_summary.json
[2025-06-06 03:45:33] -rw-------. 1 boincer umatlas    283019 Jun  6 03:44 log.45006595._057137.job.log.tgz.1
[2025-06-06 03:45:33] -rw-------. 1 boincer umatlas      7708 Jun  6 03:45 heartbeat.json
[2025-06-06 03:45:33] -rw-r--r--. 1 boincer umatlas        27 Jun  6 03:45 wrapper_checkpoint.txt
[2025-06-06 03:45:33] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 03:45 boinc_mmap_file
[2025-06-06 03:45:33] -rw-------. 1 boincer umatlas       822 Jun  6 03:45 pilotlog.txt
[2025-06-06 03:45:33] -rw-------. 1 boincer umatlas    380613 Jun  6 03:45 log.45006595._057137.job.log.1
[2025-06-06 03:45:33] -rw-------. 1 boincer umatlas       357 Jun  6 03:45 output.list
[2025-06-06 03:45:33] -rw-r--r--. 1 boincer umatlas       620 Jun  6 03:45 runtime_log
[2025-06-06 03:45:33] -rw-------. 1 boincer umatlas    686080 Jun  6 03:45 result.tar.gz
[2025-06-06 03:45:33] -rw-r--r--. 1 boincer umatlas      8660 Jun  6 03:45 runtime_log.err
[2025-06-06 03:45:33] -rw-------. 1 boincer umatlas       652 Jun  6 03:45 9xpNDmyxfh7n9Rq4apOajLDm4fhM0noT9bVof3QYDmn5aKDm4fgrYn.diag
[2025-06-06 03:45:33] -rw-r--r--. 1 boincer umatlas     22045 Jun  6 03:45 stderr.txt
[2025-06-06 03:45:33] HITS file was successfully produced:
[2025-06-06 03:45:33] -rw-------. 1 boincer umatlas 182550104 Jun  6 03:44 shared/HITS.pool.root.1
[2025-06-06 03:45:33]  *** Contents of shared directory: ***
[2025-06-06 03:45:33] total 388492
[2025-06-06 03:45:33] -rw-r--r--. 2 boincer umatlas 214008482 Jun  6 02:43 ATLAS.root_0
[2025-06-06 03:45:33] -rw-r--r--. 2 boincer umatlas     15095 Jun  6 02:43 start_atlas.sh
[2025-06-06 03:45:33] -rw-r--r--. 2 boincer umatlas    541906 Jun  6 02:43 input.tar.gz
[2025-06-06 03:45:33] -rw-------. 1 boincer umatlas 182550104 Jun  6 03:44 HITS.pool.root.1
[2025-06-06 03:45:33] -rw-------. 1 boincer umatlas    686080 Jun  6 03:45 result.tar.gz
03:45:34 (3108371): run_atlas exited; CPU time 26890.680704
03:45:34 (3108371): called boinc_finish(0)

</stderr_txt>
]]>

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