Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:11:22 (22145): wrapper (7.7.26015): starting
02:11:22 (22145): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 02:11:22] Arguments: --nthreads 12
[2025-06-06 02:11:22] Threads: 12
[2025-06-06 02:11:22] Checking for CVMFS
[2025-06-06 02:11:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 02:11:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 02:11:22] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 02:11:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 02:11:22] 2.11.2.0 2991 38139 89488 146845 3 1 18898539 20275200 1 130560 0 17144987 99.983 7030849 8285 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-06 02:11:22] CVMFS is ok
[2025-06-06 02:11:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 02:11:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 02:11:22] Further information can be found at the LHC@home message board.
[2025-06-06 02:11:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 02:11:22] Checking for apptainer binary...
[2025-06-06 02:11:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 02:11:22] Running /usr/bin/apptainer --version
[2025-06-06 02:11:22] apptainer version 1.3.2-1.el7
[2025-06-06 02:11:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 02:11:23] c-205-32.aglt2.org
[2025-06-06 02:11:23] apptainer works
[2025-06-06 02:11:23] Set ATHENA_PROC_NUMBER=12
[2025-06-06 02:11:23] Set ATHENA_CORE_NUMBER=12
[2025-06-06 02:11:23] Starting ATLAS job with PandaID=6667731254
[2025-06-06 02:11:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 03:44:49]  *** The last 200 lines of the pilot log: ***
[2025-06-06 03:44:49]  is_altstaged=None
[2025-06-06 03:44:49]  is_tar=False
[2025-06-06 03:44:49]  lfn=log.44871837._075265.job.log.tgz.1
[2025-06-06 03:44:49]  mtime=0
[2025-06-06 03:44:49]  protocol_id=None
[2025-06-06 03:44:49]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 03:44:49]  replicas=None
[2025-06-06 03:44:49]  scope=mc23_13p6TeV
[2025-06-06 03:44:49]  status=None
[2025-06-06 03:44:49]  status_code=0
[2025-06-06 03:44:49]  storage_token=
[2025-06-06 03:44:49]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6667731254/log.44871837._075265.job.log.tgz.1
[2025-06-06 03:44:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/75/7c/log.44871837._075265.job.log.tgz.1
[2025-06-06 03:44:49]  workdir=None
[2025-06-06 03:44:49] ]
[2025-06-06 03:44:49] 2025-06-06 07:44:12,174 | INFO     | transferring file log.44871837._075265.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6667731254/log.44871837._075265.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-06 03:44:49] 2025-06-06 07:44:12,174 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6667731254/log.44871837._075265.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._075265.job
[2025-06-06 03:44:49] 2025-06-06 07:44:12,195 | INFO     | adding to output.list: log.44871837._075265.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/75/7c/log.44871837._075265.job.log.tg
[2025-06-06 03:44:49] 2025-06-06 07:44:12,196 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 03:44:49] 2025-06-06 07:44:12,196 | INFO     | summary of transferred files:
[2025-06-06 03:44:49] 2025-06-06 07:44:12,196 | INFO     |  -- lfn=log.44871837._075265.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 03:44:49] 2025-06-06 07:44:12,196 | INFO     | stage-out finished correctly
[2025-06-06 03:44:49] 2025-06-06 07:44:12,282 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 03:44:49] 2025-06-06 07:44:12,366 | INFO     | job 6667731254 has state=finished
[2025-06-06 03:44:49] 2025-06-06 07:44:12,366 | INFO     | preparing for final server update for job 6667731254 in state='finished'
[2025-06-06 03:44:49] 2025-06-06 07:44:12,367 | INFO     | this job has now completed (state=finished)
[2025-06-06 03:44:49] 2025-06-06 07:44:12,367 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 03:44:49] 2025-06-06 07:44:12,367 | INFO     | log transfer has been attempted: DONE
[2025-06-06 03:44:49] 2025-06-06 07:44:12,368 | INFO     | job 6667731254 has finished - writing final server update
[2025-06-06 03:44:49] 2025-06-06 07:44:12,368 | INFO     | total number of processed events: 400 (read)
[2025-06-06 03:44:49] 2025-06-06 07:44:12,369 | INFO     | executing command: lscpu
[2025-06-06 03:44:49] 2025-06-06 07:44:12,393 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 03:44:49] 2025-06-06 07:44:14,219 | INFO     | monitor loop #416: job 0:6667731254 is in state 'finished'
[2025-06-06 03:44:49] 2025-06-06 07:44:14,219 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 03:44:49] 2025-06-06 07:44:16,722 | INFO     | monitor loop #417: job 0:6667731254 is in state 'finished'
[2025-06-06 03:44:49] 2025-06-06 07:44:16,723 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 03:44:49] 2025-06-06 07:44:16,910 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-06 03:44:49] 2025-06-06 07:44:16,914 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1806.6666666666667
[2025-06-06 03:44:49] 2025-06-06 07:44:16,917 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667731254/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 03:44:49] 2025-06-06 07:44:16,918 | INFO     | extracted standard info from prmon json
[2025-06-06 03:44:49] 2025-06-06 07:44:16,918 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 03:44:49] 2025-06-06 07:44:16,918 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 03:44:49] 2025-06-06 07:44:16,919 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 03:44:49] 2025-06-06 07:44:16,919 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 03:44:49] 2025-06-06 07:44:16,921 | INFO     | fitting pss+swap vs Time
[2025-06-06 03:44:49] 2025-06-06 07:44:16,921 | INFO     | sum of square deviations: 183761585.0
[2025-06-06 03:44:49] 2025-06-06 07:44:16,921 | INFO     | sum of deviations: -1129534071.9999998
[2025-06-06 03:44:49] 2025-06-06 07:44:16,921 | INFO     | mean x: 1749193164.5
[2025-06-06 03:44:49] 2025-06-06 07:44:16,921 | INFO     | mean y: 2727752.4285714286
[2025-06-06 03:44:49] 2025-06-06 07:44:16,922 | INFO     | -- intersect: 10754557509.514364
[2025-06-06 03:44:49] 2025-06-06 07:44:16,922 | INFO     | intersect: 10754557509.514364
[2025-06-06 03:44:49] 2025-06-06 07:44:16,922 | INFO     | chi2: 0.010459257237363745
[2025-06-06 03:44:49] 2025-06-06 07:44:16,922 | INFO     | -- intersect: 10754557509.514364
[2025-06-06 03:44:49] 2025-06-06 07:44:16,922 | INFO     | current memory leak: -6.15 B/s (using 84 data points, chi2=0.01)
[2025-06-06 03:44:49] 2025-06-06 07:44:16,922 | INFO     | could have reported an average CPU frequency of 2015 MHz (7 samples)
[2025-06-06 03:44:49] 2025-06-06 07:44:16,923 | INFO     | ..............................
[2025-06-06 03:44:49] 2025-06-06 07:44:16,923 | INFO     | . Timing measurements:
[2025-06-06 03:44:49] 2025-06-06 07:44:16,923 | INFO     | . get job = 0 s
[2025-06-06 03:44:49] 2025-06-06 07:44:16,923 | INFO     | . initial setup = 2 s
[2025-06-06 03:44:49] 2025-06-06 07:44:16,923 | INFO     | . payload setup = 9 s
[2025-06-06 03:44:49] 2025-06-06 07:44:16,923 | INFO     | . stage-in = 0 s
[2025-06-06 03:44:49] 2025-06-06 07:44:16,923 | INFO     | . payload execution = 5524 s
[2025-06-06 03:44:49] 2025-06-06 07:44:16,923 | INFO     | . stage-out = 0 s
[2025-06-06 03:44:49] 2025-06-06 07:44:16,923 | INFO     | . log creation = 0 s
[2025-06-06 03:44:49] 2025-06-06 07:44:16,923 | INFO     | ..............................
[2025-06-06 03:44:49] 2025-06-06 07:44:17,008 | INFO     | 
[2025-06-06 03:44:49] 2025-06-06 07:44:17,008 | INFO     | job summary report
[2025-06-06 03:44:49] 2025-06-06 07:44:17,009 | INFO     | --------------------------------------------------
[2025-06-06 03:44:49] 2025-06-06 07:44:17,009 | INFO     | PanDA job id: 6667731254
[2025-06-06 03:44:49] 2025-06-06 07:44:17,009 | INFO     | task id: 44871837
[2025-06-06 03:44:49] 2025-06-06 07:44:17,009 | INFO     | errors: (none)
[2025-06-06 03:44:49] 2025-06-06 07:44:17,009 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 03:44:49] 2025-06-06 07:44:17,009 | INFO     | pilot state: finished 
[2025-06-06 03:44:49] 2025-06-06 07:44:17,010 | INFO     | transexitcode: 0
[2025-06-06 03:44:49] 2025-06-06 07:44:17,010 | INFO     | exeerrorcode: 0
[2025-06-06 03:44:49] 2025-06-06 07:44:17,010 | INFO     | exeerrordiag: 
[2025-06-06 03:44:49] 2025-06-06 07:44:17,010 | INFO     | exitcode: 0
[2025-06-06 03:44:49] 2025-06-06 07:44:17,010 | INFO     | exitmsg: OK
[2025-06-06 03:44:49] 2025-06-06 07:44:17,010 | INFO     | cpuconsumptiontime: 59135 s
[2025-06-06 03:44:49] 2025-06-06 07:44:17,011 | INFO     | nevents: 400
[2025-06-06 03:44:49] 2025-06-06 07:44:17,011 | INFO     | neventsw: 0
[2025-06-06 03:44:49] 2025-06-06 07:44:17,011 | INFO     | pid: 32210
[2025-06-06 03:44:49] 2025-06-06 07:44:17,011 | INFO     | pgrp: 32210
[2025-06-06 03:44:49] 2025-06-06 07:44:17,011 | INFO     | corecount: 12
[2025-06-06 03:44:49] 2025-06-06 07:44:17,011 | INFO     | event service: False
[2025-06-06 03:44:49] 2025-06-06 07:44:17,012 | INFO     | sizes: {0: 2397560, 1: 2397759, 6: 2398021, 12: 2398049, 5537: 2424645, 5538: 2433769, 5543: 2433907}
[2025-06-06 03:44:49] 2025-06-06 07:44:17,012 | INFO     | --------------------------------------------------
[2025-06-06 03:44:49] 2025-06-06 07:44:17,012 | INFO     | 
[2025-06-06 03:44:49] 2025-06-06 07:44:17,012 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 03:44:49] 2025-06-06 07:44:17,035 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 03:44:49] 2025-06-06 07:44:17,035 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 03:44:49] 2025-06-06 07:44:17,035 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 03:44:49] 2025-06-06 07:44:17,036 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 03:44:49] 2025-06-06 07:44:17,036 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 03:44:49] 2025-06-06 07:44:17,036 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 03:44:49] 2025-06-06 07:44:17,036 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 03:44:49] 2025-06-06 07:44:17,036 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 03:44:49] 2025-06-06 07:44:17,036 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 03:44:49] 2025-06-06 07:44:17,037 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 03:44:49] 2025-06-06 07:44:17,037 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 03:44:49] 2025-06-06 07:44:17,037 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 03:44:49] 2025-06-06 07:44:17,037 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 03:44:49] 2025-06-06 07:44:17,037 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 03:44:49] 2025-06-06 07:44:17,037 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 03:44:49] 2025-06-06 07:44:17,038 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 03:44:49] 2025-06-06 07:44:17,038 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 03:44:49] 2025-06-06 07:44:17,038 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 03:44:49] 2025-06-06 07:44:17,038 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 03:44:49] 2025-06-06 07:44:17,038 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 03:44:49] 2025-06-06 07:44:17,038 | INFO     | job 6667731254 has completed (purged errors)
[2025-06-06 03:44:49] 2025-06-06 07:44:17,039 | INFO     | overall cleanup function is called
[2025-06-06 03:44:49] 2025-06-06 07:44:18,046 | INFO     | --- collectZombieJob: --- 10, [32210]
[2025-06-06 03:44:49] 2025-06-06 07:44:18,046 | INFO     | zombie collector waiting for pid 32210
[2025-06-06 03:44:49] 2025-06-06 07:44:18,047 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 03:44:49] 2025-06-06 07:44:18,047 | INFO     | collected zombie processes
[2025-06-06 03:44:49] 2025-06-06 07:44:18,047 | INFO     | will attempt to kill all subprocesses of pid=32210
[2025-06-06 03:44:49] 2025-06-06 07:44:18,139 | INFO     | process IDs to be killed: [32210] (in reverse order)
[2025-06-06 03:44:49] 2025-06-06 07:44:18,188 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 03:44:49] 2025-06-06 07:44:18,189 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 03:44:49] 2025-06-06 07:44:18,192 | INFO     | did not find any defunct processes belonging to 32210
[2025-06-06 03:44:49] 2025-06-06 07:44:18,195 | INFO     | did not find any defunct processes belonging to 32210
[2025-06-06 03:44:49] 2025-06-06 07:44:18,196 | INFO     | ready for new job
[2025-06-06 03:44:49] 2025-06-06 07:44:18,196 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 03:44:49] 2025-06-06 07:44:18,197 | INFO     | ***************************************
[2025-06-06 03:44:49] 2025-06-06 07:44:18,197 | INFO     | ***  PanDA Pilot version 3.10.3.82  ***
[2025-06-06 03:44:49] 2025-06-06 07:44:18,198 | INFO     | ***************************************
[2025-06-06 03:44:49] 2025-06-06 07:44:18,198 | INFO     | 
[2025-06-06 03:44:49] 2025-06-06 07:44:18,198 | INFO     | architecture information:
[2025-06-06 03:44:49] 2025-06-06 07:44:18,199 | INFO     | executing command: cat /etc/os-release
[2025-06-06 03:44:49] 2025-06-06 07:44:18,212 | INFO     | cat /etc/os-release:
[2025-06-06 03:44:49] NAME="CentOS Linux"
[2025-06-06 03:44:49] VERSION="7 (Core)"
[2025-06-06 03:44:49] ID="centos"
[2025-06-06 03:44:49] ID_LIKE="rhel fedora"
[2025-06-06 03:44:49] VERSION_ID="7"
[2025-06-06 03:44:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 03:44:49] ANSI_COLOR="0;31"
[2025-06-06 03:44:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 03:44:49] HOME_URL="https://www.centos.org/"
[2025-06-06 03:44:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 03:44:49] 
[2025-06-06 03:44:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 03:44:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 03:44:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 03:44:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 03:44:49] 
[2025-06-06 03:44:49] 2025-06-06 07:44:18,213 | INFO     | ***************************************
[2025-06-06 03:44:49] 2025-06-06 07:44:18,715 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 03:44:49] 2025-06-06 07:44:18,732 | INFO     | sufficient remaining disk space (29382148096 B)
[2025-06-06 03:44:49] 2025-06-06 07:44:18,732 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 03:44:49] 2025-06-06 07:44:18,732 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 03:44:49] 2025-06-06 07:44:18,732 | INFO     | update_server=False
[2025-06-06 03:44:49] 2025-06-06 07:44:18,733 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 03:44:49] 2025-06-06 07:44:18,733 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 03:44:49] 2025-06-06 07:44:18,733 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 03:44:49] 2025-06-06 07:44:18,734 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 03:44:49] 2025-06-06 07:44:19,103 | INFO     | all job control threads have been joined
[2025-06-06 03:44:49] 2025-06-06 07:44:19,170 | INFO     | all payload control threads have been joined
[2025-06-06 03:44:49] 2025-06-06 07:44:19,195 | INFO     | all data control threads have been joined
[2025-06-06 03:44:49] 2025-06-06 07:44:19,226 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 03:44:49] 2025-06-06 07:44:19,226 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 03:44:49] 2025-06-06 07:44:19,236 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 03:44:49] 2025-06-06 07:44:19,237 | INFO     | will abort loop
[2025-06-06 03:44:49] 2025-06-06 07:44:19,738 | INFO     | [job] retrieve thread has finished
[2025-06-06 03:44:49] 2025-06-06 07:44:19,739 | INFO     | [job] queue monitor thread has finished
[2025-06-06 03:44:49] 2025-06-06 07:44:19,851 | INFO     | [data] copytool_in thread has finished
[2025-06-06 03:44:49] 2025-06-06 07:44:19,874 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 03:44:49] 2025-06-06 07:44:19,955 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 03:44:49] 2025-06-06 07:44:20,107 | INFO     | [job] control thread has finished
[2025-06-06 03:44:49] 2025-06-06 07:44:20,176 | INFO     | [payload] control thread has finished
[2025-06-06 03:44:49] 2025-06-06 07:44:20,200 | INFO     | [data] control thread has finished
[2025-06-06 03:44:49] 2025-06-06 07:44:20,242 | INFO     | [job] job monitor thread has finished
[2025-06-06 03:44:49] 2025-06-06 07:44:20,456 | INFO     | [payload] validate_post thread has finished
[2025-06-06 03:44:49] 2025-06-06 07:44:20,739 | INFO     | [data] copytool_out thread has finished
[2025-06-06 03:44:49] 2025-06-06 07:44:21,114 | INFO     | [job] validate thread has finished
[2025-06-06 03:44:49] 2025-06-06 07:44:21,116 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 03:44:49] 2025-06-06 07:44:21,169 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 03:44:49] 2025-06-06 07:44:21,310 | INFO     | [payload] failed_post thread has finished
[2025-06-06 03:44:49] 2025-06-06 07:44:22,740 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 03:44:49] 2025-06-06 07:44:24,592 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140045239113536)>', '<ExcThread(monitor, started 140044538976000)>']
[2025-06-06 03:44:49] 2025-06-06 07:44:29,605 | INFO     | all workflow threads have been joined
[2025-06-06 03:44:49] 2025-06-06 07:44:29,605 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 03:44:49] 2025-06-06 07:44:29,619 | INFO     | traces error code: 0
[2025-06-06 03:44:49] 2025-06-06 07:44:29,619 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 03:44:49] 2025-06-06 07:44:49,568 | INFO     | PID=25744 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-06 03:44:49] 2025-06-06 07:44:49,568 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 03:44:49] 2025-06-06 07:44:49,568 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 03:44:49] 2025-06-06 07:44:49,569 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 03:44:49] 2025-06-06 07:44:49,569 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 03:44:49] 2025-06-06 07:44:49,569 | INFO     | [monitor] control thread has ended
[2025-06-06 03:44:49] 2025-06-06 07:44:49,657 [wrapper] ==== pilot stdout END ====
[2025-06-06 03:44:49] 2025-06-06 07:44:49,661 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 03:44:49] 2025-06-06 07:44:49,665 [wrapper] pilotpid: 25744
[2025-06-06 03:44:49] 2025-06-06 07:44:49,668 [wrapper] Pilot exit status: 0
[2025-06-06 03:44:49] 2025-06-06 07:44:49,683 [wrapper] pandaids: 6667731254
[2025-06-06 03:44:49] 2025-06-06 07:44:49,721 [wrapper] cleanup supervisor_pilot 11603 25745
[2025-06-06 03:44:49] 2025-06-06 07:44:49,725 [wrapper] Test setup, not cleaning
[2025-06-06 03:44:49] 2025-06-06 07:44:49,729 [wrapper] apfmon messages muted
[2025-06-06 03:44:49] 2025-06-06 07:44:49,733 [wrapper] ==== wrapper stdout END ====
[2025-06-06 03:44:49] 2025-06-06 07:44:49,736 [wrapper] ==== wrapper stderr END ====
[2025-06-06 03:44:49]  *** Error codes and diagnostics ***
[2025-06-06 03:44:49]     "exeErrorCode": 0,
[2025-06-06 03:44:49]     "exeErrorDiag": "",
[2025-06-06 03:44:49]     "pilotErrorCode": 0,
[2025-06-06 03:44:49]     "pilotErrorDiag": "",
[2025-06-06 03:44:49]  *** Listing of results directory ***
[2025-06-06 03:44:49] total 415056
[2025-06-06 03:44:49] -rw-r--r-- 1 boincer umatlas    529402 Jun  6 01:25 pilot3.tar.gz
[2025-06-06 03:44:49] -rwx------ 1 boincer umatlas     37140 Jun  6 02:07 runpilot2-wrapper.sh
[2025-06-06 03:44:49] -rw-r--r-- 1 boincer umatlas      5112 Jun  6 02:07 queuedata.json
[2025-06-06 03:44:49] -rw-r--r-- 1 boincer umatlas       100 Jun  6 02:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 03:44:49] -rwxr-xr-x 1 boincer umatlas      7986 Jun  6 02:11 run_atlas
[2025-06-06 03:44:49] -rw-r--r-- 1 boincer umatlas       105 Jun  6 02:11 job.xml
[2025-06-06 03:44:49] -rw-r--r-- 2 boincer umatlas 225668947 Jun  6 02:11 EVNT.44871834._002949.pool.root.1
[2025-06-06 03:44:49] -rw-r--r-- 2 boincer umatlas     15095 Jun  6 02:11 start_atlas.sh
[2025-06-06 03:44:49] drwxrwx--x 2 boincer umatlas      4096 Jun  6 02:11 shared
[2025-06-06 03:44:49] -rw-r--r-- 2 boincer umatlas    541908 Jun  6 02:11 input.tar.gz
[2025-06-06 03:44:49] -rw-r--r-- 1 boincer umatlas         0 Jun  6 02:11 boinc_lockfile
[2025-06-06 03:44:49] -rw-r--r-- 1 boincer umatlas      2558 Jun  6 02:11 pandaJob.out
[2025-06-06 03:44:49] -rw------- 1 boincer umatlas    988109 Jun  6 02:11 agis_schedconf.cvmfs.json
[2025-06-06 03:44:49] -rw------- 1 boincer umatlas   1598969 Jun  6 02:11 agis_ddmendpoints.agis.ALL.json
[2025-06-06 03:44:49] drwx------ 4 boincer umatlas      4096 Jun  6 02:11 pilot3
[2025-06-06 03:44:49] -rw-r--r-- 1 boincer umatlas      5868 Jun  6 03:39 init_data.xml
[2025-06-06 03:44:49] -rw------- 1 boincer umatlas 193683845 Jun  6 03:43 HITS.44871837._075265.pool.root.1
[2025-06-06 03:44:49] -rw------- 1 boincer umatlas        95 Jun  6 03:43 pilot_heartbeat.json
[2025-06-06 03:44:49] -rw------- 1 boincer umatlas      1046 Jun  6 03:44 memory_monitor_summary.json
[2025-06-06 03:44:49] -rw-r--r-- 1 boincer umatlas       529 Jun  6 03:44 boinc_task_state.xml
[2025-06-06 03:44:49] -rw------- 1 boincer umatlas    361189 Jun  6 03:44 log.44871837._075265.job.log.tgz.1
[2025-06-06 03:44:49] -rw------- 1 boincer umatlas      7778 Jun  6 03:44 heartbeat.json
[2025-06-06 03:44:49] -rw-r--r-- 1 boincer umatlas        27 Jun  6 03:44 wrapper_checkpoint.txt
[2025-06-06 03:44:49] -rw-r--r-- 1 boincer umatlas      8192 Jun  6 03:44 boinc_mmap_file
[2025-06-06 03:44:49] -rw------- 1 boincer umatlas       745 Jun  6 03:44 pilotlog.txt
[2025-06-06 03:44:49] -rw------- 1 boincer umatlas    524666 Jun  6 03:44 log.44871837._075265.job.log.1
[2025-06-06 03:44:49] -rw------- 1 boincer umatlas       357 Jun  6 03:44 output.list
[2025-06-06 03:44:49] -rw-r--r-- 1 boincer umatlas       620 Jun  6 03:44 runtime_log
[2025-06-06 03:44:49] -rw------- 1 boincer umatlas    901120 Jun  6 03:44 result.tar.gz
[2025-06-06 03:44:49] -rw-r--r-- 1 boincer umatlas      8662 Jun  6 03:44 runtime_log.err
[2025-06-06 03:44:49] -rw------- 1 boincer umatlas       660 Jun  6 03:44 fqgNDmdPfh7n9Rq4apOajLDm4fhM0noT9bVof3QYDmk5aKDmlCdpln.diag
[2025-06-06 03:44:49] -rw-r--r-- 1 boincer umatlas     21482 Jun  6 03:44 stderr.txt
[2025-06-06 03:44:49] HITS file was successfully produced:
[2025-06-06 03:44:49] -rw------- 1 boincer umatlas 193683845 Jun  6 03:43 shared/HITS.pool.root.1
[2025-06-06 03:44:49]  *** Contents of shared directory: ***
[2025-06-06 03:44:49] total 410960
[2025-06-06 03:44:49] -rw-r--r-- 2 boincer umatlas 225668947 Jun  6 02:11 ATLAS.root_0
[2025-06-06 03:44:49] -rw-r--r-- 2 boincer umatlas     15095 Jun  6 02:11 start_atlas.sh
[2025-06-06 03:44:49] -rw-r--r-- 2 boincer umatlas    541908 Jun  6 02:11 input.tar.gz
[2025-06-06 03:44:49] -rw------- 1 boincer umatlas 193683845 Jun  6 03:43 HITS.pool.root.1
[2025-06-06 03:44:49] -rw------- 1 boincer umatlas    901120 Jun  6 03:44 result.tar.gz
03:44:51 (22145): run_atlas exited; CPU time 59118.501651
03:44:51 (22145): called boinc_finish(0)

</stderr_txt>
]]>

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