Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:04:06 (2894211): wrapper (7.7.26015): starting
02:04:06 (2894211): wrapper: running run_atlas (--nthreads 10)
[2025-06-06 02:04:06] Arguments: --nthreads 10
[2025-06-06 02:04:06] Threads: 10
[2025-06-06 02:04:06] Checking for CVMFS
[2025-06-06 02:04:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 02:04:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 02:04:06] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 02:04:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 02:04:07] 2.12.6.0 9368 3832 268848 146844 1 463 16743017 32935937 13990 16776704 0 17339272 99.582 17802980 33700 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-06 02:04:07] CVMFS is ok
[2025-06-06 02:04:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 02:04:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 02:04:07] Further information can be found at the LHC@home message board.
[2025-06-06 02:04:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 02:04:07] Checking for apptainer binary...
[2025-06-06 02:04:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 02:04:07] Running /usr/bin/apptainer --version
[2025-06-06 02:04:07] apptainer version 1.4.1-1.el9
[2025-06-06 02:04:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 02:04:07] c-8-24.aglt2.org
[2025-06-06 02:04:07] apptainer works
[2025-06-06 02:04:07] Set ATHENA_PROC_NUMBER=10
[2025-06-06 02:04:07] Set ATHENA_CORE_NUMBER=10
[2025-06-06 02:04:07] Starting ATLAS job with PandaID=6669237690
[2025-06-06 02:04:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 04:07:46]  *** The last 200 lines of the pilot log: ***
[2025-06-06 04:07:46] 2025-06-06 08:07:31,628 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6669237690/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 04:07:46] 2025-06-06 08:07:31,629 | INFO     | extracted standard info from prmon json
[2025-06-06 04:07:46] 2025-06-06 08:07:31,629 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 04:07:46] 2025-06-06 08:07:31,629 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 04:07:46] 2025-06-06 08:07:31,629 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 04:07:46] 2025-06-06 08:07:31,630 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 04:07:46] 2025-06-06 08:07:31,633 | INFO     | fitting pss+swap vs Time
[2025-06-06 04:07:46] 2025-06-06 08:07:31,633 | INFO     | sum of square deviations: 549289872.9917359
[2025-06-06 04:07:46] 2025-06-06 08:07:31,634 | INFO     | sum of deviations: 21822968446.56199
[2025-06-06 04:07:46] 2025-06-06 08:07:31,634 | INFO     | mean x: 1749193547.0082645
[2025-06-06 04:07:46] 2025-06-06 08:07:31,634 | INFO     | mean y: 2263781.4380165287
[2025-06-06 04:07:46] 2025-06-06 08:07:31,634 | INFO     | -- intersect: -69492182521.35321
[2025-06-06 04:07:46] 2025-06-06 08:07:31,634 | INFO     | intersect: -69492182521.35321
[2025-06-06 04:07:46] 2025-06-06 08:07:31,634 | INFO     | chi2: 1.6368938977265006
[2025-06-06 04:07:46] 2025-06-06 08:07:31,635 | INFO     | sum of square deviations: 483968022.9913803
[2025-06-06 04:07:46] 2025-06-06 08:07:31,635 | INFO     | sum of deviations: 21175811273.00862
[2025-06-06 04:07:46] 2025-06-06 08:07:31,635 | INFO     | mean x: 1749193394.5086207
[2025-06-06 04:07:46] 2025-06-06 08:07:31,636 | INFO     | mean y: 2262225.4913793104
[2025-06-06 04:07:46] 2025-06-06 08:07:31,636 | INFO     | -- intersect: -76532937296.91092
[2025-06-06 04:07:46] 2025-06-06 08:07:31,636 | INFO     | intersect: -76532937296.91092
[2025-06-06 04:07:46] 2025-06-06 08:07:31,636 | INFO     | chi2: 1.6334519121953748
[2025-06-06 04:07:46] 2025-06-06 08:07:31,636 | INFO     | current chi2=1.6334519121953748 (change=0.21027542077751382 %)
[2025-06-06 04:07:46] 2025-06-06 08:07:31,636 | INFO     | right removable region: 115
[2025-06-06 04:07:46] 2025-06-06 08:07:31,636 | INFO     | sum of square deviations: 483967412.9913803
[2025-06-06 04:07:46] 2025-06-06 08:07:31,637 | INFO     | sum of deviations: 2677615052.4568973
[2025-06-06 04:07:46] 2025-06-06 08:07:31,637 | INFO     | mean x: 1749193699.5086207
[2025-06-06 04:07:46] 2025-06-06 08:07:31,637 | INFO     | mean y: 2307815.043103448
[2025-06-06 04:07:46] 2025-06-06 08:07:31,637 | INFO     | -- intersect: -9675342484.834562
[2025-06-06 04:07:46] 2025-06-06 08:07:31,637 | INFO     | intersect: -9675342484.834562
[2025-06-06 04:07:46] 2025-06-06 08:07:31,638 | INFO     | chi2: 0.05888725727752721
[2025-06-06 04:07:46] 2025-06-06 08:07:31,638 | INFO     | current chi2=0.05888725727752721 (change=96.40250004234751 %)
[2025-06-06 04:07:46] 2025-06-06 08:07:31,638 | INFO     | sum of square deviations: 424040402.9909904
[2025-06-06 04:07:46] 2025-06-06 08:07:31,639 | INFO     | sum of deviations: 2705649407.198198
[2025-06-06 04:07:46] 2025-06-06 08:07:31,639 | INFO     | mean x: 1749193852.0090091
[2025-06-06 04:07:46] 2025-06-06 08:07:31,639 | INFO     | mean y: 2307687.8018018017
[2025-06-06 04:07:46] 2025-06-06 08:07:31,639 | INFO     | -- intersect: -11158669604.41029
[2025-06-06 04:07:46] 2025-06-06 08:07:31,639 | INFO     | intersect: -11158669604.41029
[2025-06-06 04:07:46] 2025-06-06 08:07:31,639 | INFO     | chi2: 0.0352045528918635
[2025-06-06 04:07:46] 2025-06-06 08:07:31,639 | INFO     | current chi2=0.0352045528918635 (change=40.21702738514466 %)
[2025-06-06 04:07:46] 2025-06-06 08:07:31,640 | INFO     | sum of square deviations: 369276280.4905652
[2025-06-06 04:07:46] 2025-06-06 08:07:31,640 | INFO     | sum of deviations: 1336482208.320755
[2025-06-06 04:07:46] 2025-06-06 08:07:31,640 | INFO     | mean x: 1749194004.509434
[2025-06-06 04:07:46] 2025-06-06 08:07:31,640 | INFO     | mean y: 2311495.179245283
[2025-06-06 04:07:46] 2025-06-06 08:07:31,640 | INFO     | -- intersect: -6328359575.33356
[2025-06-06 04:07:46] 2025-06-06 08:07:31,641 | INFO     | intersect: -6328359575.33356
[2025-06-06 04:07:46] 2025-06-06 08:07:31,641 | INFO     | chi2: 0.030474307727635996
[2025-06-06 04:07:46] 2025-06-06 08:07:31,641 | INFO     | current chi2=0.030474307727635996 (change=13.436458570450306 %)
[2025-06-06 04:07:46] 2025-06-06 08:07:31,641 | INFO     | left removable region: 30
[2025-06-06 04:07:46] 2025-06-06 08:07:31,641 | INFO     | sum of square deviations: 190403570.0
[2025-06-06 04:07:46] 2025-06-06 08:07:31,642 | INFO     | sum of deviations: -604953347.9999999
[2025-06-06 04:07:46] 2025-06-06 08:07:31,642 | INFO     | mean x: 1749194279.0
[2025-06-06 04:07:46] 2025-06-06 08:07:31,642 | INFO     | mean y: 2319080.5764705883
[2025-06-06 04:07:46] 2025-06-06 08:07:31,642 | INFO     | -- intersect: 5559887856.117265
[2025-06-06 04:07:46] 2025-06-06 08:07:31,642 | INFO     | intersect: 5559887856.117265
[2025-06-06 04:07:46] 2025-06-06 08:07:31,642 | INFO     | chi2: 0.019728699434376693
[2025-06-06 04:07:46] 2025-06-06 08:07:31,642 | INFO     | -- intersect: 5559887856.117265
[2025-06-06 04:07:46] 2025-06-06 08:07:31,642 | INFO     | current memory leak: -3.18 B/s (using 85 data points, chi2=0.02)
[2025-06-06 04:07:46] 2025-06-06 08:07:31,643 | INFO     | ..............................
[2025-06-06 04:07:46] 2025-06-06 08:07:31,643 | INFO     | . Timing measurements:
[2025-06-06 04:07:46] 2025-06-06 08:07:31,643 | INFO     | . get job = 0 s
[2025-06-06 04:07:46] 2025-06-06 08:07:31,643 | INFO     | . initial setup = 2 s
[2025-06-06 04:07:46] 2025-06-06 08:07:31,644 | INFO     | . payload setup = 8 s
[2025-06-06 04:07:46] 2025-06-06 08:07:31,644 | INFO     | . stage-in = 0 s
[2025-06-06 04:07:46] 2025-06-06 08:07:31,644 | INFO     | . payload execution = 7355 s
[2025-06-06 04:07:46] 2025-06-06 08:07:31,644 | INFO     | . stage-out = 0 s
[2025-06-06 04:07:46] 2025-06-06 08:07:31,644 | INFO     | . log creation = 0 s
[2025-06-06 04:07:46] 2025-06-06 08:07:31,644 | INFO     | ..............................
[2025-06-06 04:07:46] 2025-06-06 08:07:31,753 | INFO     | 
[2025-06-06 04:07:46] 2025-06-06 08:07:31,753 | INFO     | job summary report
[2025-06-06 04:07:46] 2025-06-06 08:07:31,753 | INFO     | --------------------------------------------------
[2025-06-06 04:07:46] 2025-06-06 08:07:31,753 | INFO     | PanDA job id: 6669237690
[2025-06-06 04:07:46] 2025-06-06 08:07:31,754 | INFO     | task id: 44871837
[2025-06-06 04:07:46] 2025-06-06 08:07:31,754 | INFO     | errors: (none)
[2025-06-06 04:07:46] 2025-06-06 08:07:31,754 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 04:07:46] 2025-06-06 08:07:31,754 | INFO     | pilot state: finished 
[2025-06-06 04:07:46] 2025-06-06 08:07:31,754 | INFO     | transexitcode: 0
[2025-06-06 04:07:46] 2025-06-06 08:07:31,754 | INFO     | exeerrorcode: 0
[2025-06-06 04:07:46] 2025-06-06 08:07:31,754 | INFO     | exeerrordiag: 
[2025-06-06 04:07:46] 2025-06-06 08:07:31,754 | INFO     | exitcode: 0
[2025-06-06 04:07:46] 2025-06-06 08:07:31,754 | INFO     | exitmsg: OK
[2025-06-06 04:07:46] 2025-06-06 08:07:31,754 | INFO     | cpuconsumptiontime: 60248 s
[2025-06-06 04:07:46] 2025-06-06 08:07:31,755 | INFO     | nevents: 400
[2025-06-06 04:07:46] 2025-06-06 08:07:31,755 | INFO     | neventsw: 0
[2025-06-06 04:07:46] 2025-06-06 08:07:31,755 | INFO     | pid: 2904523
[2025-06-06 04:07:46] 2025-06-06 08:07:31,755 | INFO     | pgrp: 2904523
[2025-06-06 04:07:46] 2025-06-06 08:07:31,755 | INFO     | corecount: 10
[2025-06-06 04:07:46] 2025-06-06 08:07:31,755 | INFO     | event service: False
[2025-06-06 04:07:46] 2025-06-06 08:07:31,755 | INFO     | sizes: {0: 2396564, 1: 2397420, 5: 2397626, 12: 2397682, 7368: 2424809, 7370: 2433750, 7371: 2433934, 7378: 2434104}
[2025-06-06 04:07:46] 2025-06-06 08:07:31,755 | INFO     | --------------------------------------------------
[2025-06-06 04:07:46] 2025-06-06 08:07:31,755 | INFO     | 
[2025-06-06 04:07:46] 2025-06-06 08:07:31,755 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 04:07:46] 2025-06-06 08:07:31,774 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 04:07:46] 2025-06-06 08:07:31,774 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 04:07:46] 2025-06-06 08:07:31,775 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 04:07:46] 2025-06-06 08:07:31,775 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 04:07:46] 2025-06-06 08:07:31,775 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 04:07:46] 2025-06-06 08:07:31,775 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 04:07:46] 2025-06-06 08:07:31,775 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 04:07:46] 2025-06-06 08:07:31,775 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 04:07:46] 2025-06-06 08:07:31,775 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 04:07:46] 2025-06-06 08:07:31,775 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 04:07:46] 2025-06-06 08:07:31,775 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 04:07:46] 2025-06-06 08:07:31,776 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 04:07:46] 2025-06-06 08:07:31,776 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 04:07:46] 2025-06-06 08:07:31,776 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 04:07:46] 2025-06-06 08:07:31,776 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 04:07:46] 2025-06-06 08:07:31,776 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 04:07:46] 2025-06-06 08:07:31,776 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 04:07:46] 2025-06-06 08:07:31,776 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 04:07:46] 2025-06-06 08:07:31,776 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 04:07:46] 2025-06-06 08:07:31,776 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 04:07:46] 2025-06-06 08:07:31,777 | INFO     | job 6669237690 has completed (purged errors)
[2025-06-06 04:07:46] 2025-06-06 08:07:31,777 | INFO     | overall cleanup function is called
[2025-06-06 04:07:46] 2025-06-06 08:07:32,784 | INFO     | --- collectZombieJob: --- 10, [2904523]
[2025-06-06 04:07:46] 2025-06-06 08:07:32,785 | INFO     | zombie collector waiting for pid 2904523
[2025-06-06 04:07:46] 2025-06-06 08:07:32,785 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 04:07:46] 2025-06-06 08:07:32,785 | INFO     | collected zombie processes
[2025-06-06 04:07:46] 2025-06-06 08:07:32,785 | INFO     | will attempt to kill all subprocesses of pid=2904523
[2025-06-06 04:07:46] 2025-06-06 08:07:33,105 | INFO     | process IDs to be killed: [2904523] (in reverse order)
[2025-06-06 04:07:46] 2025-06-06 08:07:33,204 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 04:07:46] 2025-06-06 08:07:33,205 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 04:07:46] 2025-06-06 08:07:33,216 | INFO     | did not find any defunct processes belonging to 2904523
[2025-06-06 04:07:46] 2025-06-06 08:07:33,227 | INFO     | did not find any defunct processes belonging to 2904523
[2025-06-06 04:07:46] 2025-06-06 08:07:33,227 | INFO     | ready for new job
[2025-06-06 04:07:46] 2025-06-06 08:07:33,227 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 04:07:46] 2025-06-06 08:07:33,229 | INFO     | **************************************
[2025-06-06 04:07:46] 2025-06-06 08:07:33,229 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 04:07:46] 2025-06-06 08:07:33,229 | INFO     | **************************************
[2025-06-06 04:07:46] 2025-06-06 08:07:33,229 | INFO     | 
[2025-06-06 04:07:46] 2025-06-06 08:07:33,243 | INFO     | architecture information:
[2025-06-06 04:07:46] 2025-06-06 08:07:33,244 | INFO     | executing command: cat /etc/os-release
[2025-06-06 04:07:46] 2025-06-06 08:07:33,257 | INFO     | cat /etc/os-release:
[2025-06-06 04:07:46] NAME="CentOS Linux"
[2025-06-06 04:07:46] VERSION="7 (Core)"
[2025-06-06 04:07:46] ID="centos"
[2025-06-06 04:07:46] ID_LIKE="rhel fedora"
[2025-06-06 04:07:46] VERSION_ID="7"
[2025-06-06 04:07:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 04:07:46] ANSI_COLOR="0;31"
[2025-06-06 04:07:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 04:07:46] HOME_URL="https://www.centos.org/"
[2025-06-06 04:07:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 04:07:46] 
[2025-06-06 04:07:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 04:07:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 04:07:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 04:07:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 04:07:46] 
[2025-06-06 04:07:46] 2025-06-06 08:07:33,257 | INFO     | **************************************
[2025-06-06 04:07:46] 2025-06-06 08:07:33,761 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 04:07:46] 2025-06-06 08:07:33,778 | INFO     | sufficient remaining disk space (76560728064 B)
[2025-06-06 04:07:46] 2025-06-06 08:07:33,778 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 04:07:46] 2025-06-06 08:07:33,778 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 04:07:46] 2025-06-06 08:07:33,778 | INFO     | update_server=False
[2025-06-06 04:07:46] 2025-06-06 08:07:33,778 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 04:07:46] 2025-06-06 08:07:33,779 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 04:07:46] 2025-06-06 08:07:33,779 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 04:07:46] 2025-06-06 08:07:33,779 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 04:07:46] 2025-06-06 08:07:33,779 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 04:07:46] 2025-06-06 08:07:33,869 | INFO     | all job control threads have been joined
[2025-06-06 04:07:46] 2025-06-06 08:07:33,963 | INFO     | all payload control threads have been joined
[2025-06-06 04:07:46] 2025-06-06 08:07:34,380 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 04:07:46] 2025-06-06 08:07:34,381 | INFO     | aborting loop
[2025-06-06 04:07:46] 2025-06-06 08:07:34,468 | INFO     | all data control threads have been joined
[2025-06-06 04:07:46] 2025-06-06 08:07:34,699 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 04:07:46] 2025-06-06 08:07:34,784 | INFO     | [job] retrieve thread has finished
[2025-06-06 04:07:46] 2025-06-06 08:07:34,874 | INFO     | [job] control thread has finished
[2025-06-06 04:07:46] 2025-06-06 08:07:34,968 | INFO     | [payload] control thread has finished
[2025-06-06 04:07:46] 2025-06-06 08:07:35,077 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 04:07:46] 2025-06-06 08:07:35,312 | INFO     | [job] validate thread has finished
[2025-06-06 04:07:46] 2025-06-06 08:07:35,386 | INFO     | [job] job monitor thread has finished
[2025-06-06 04:07:46] 2025-06-06 08:07:35,414 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 04:07:46] 2025-06-06 08:07:35,415 | INFO     | [data] copytool_in thread has finished
[2025-06-06 04:07:46] 2025-06-06 08:07:35,473 | INFO     | [data] control thread has finished
[2025-06-06 04:07:46] 2025-06-06 08:07:35,476 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 04:07:46] 2025-06-06 08:07:35,708 | INFO     | [payload] validate_post thread has finished
[2025-06-06 04:07:46] 2025-06-06 08:07:35,960 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 04:07:46] 2025-06-06 08:07:36,179 | INFO     | [payload] failed_post thread has finished
[2025-06-06 04:07:46] 2025-06-06 08:07:36,268 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 04:07:46] 2025-06-06 08:07:36,704 | INFO     | [data] copytool_out thread has finished
[2025-06-06 04:07:46] 2025-06-06 08:07:36,762 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 04:07:46] 2025-06-06 08:07:37,767 | INFO     | [job] queue monitor thread has finished
[2025-06-06 04:07:46] 2025-06-06 08:07:39,966 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 04:07:46] 2025-06-06 08:07:40,894 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140678285932352)>', '<ExcThread(monitor, started 140677786609408)>']
[2025-06-06 04:07:46] 2025-06-06 08:07:41,819 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 04:07:46] 2025-06-06 08:07:41,820 | INFO     | [monitor] control thread has ended
[2025-06-06 04:07:46] 2025-06-06 08:07:45,918 | INFO     | all workflow threads have been joined
[2025-06-06 04:07:46] 2025-06-06 08:07:45,918 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 04:07:46] 2025-06-06 08:07:45,918 | INFO     | traces error code: 0
[2025-06-06 04:07:46] 2025-06-06 08:07:45,919 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 04:07:46] 2025-06-06 08:07:46,092 [wrapper] ==== pilot stdout END ====
[2025-06-06 04:07:46] 2025-06-06 08:07:46,095 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 04:07:46] 2025-06-06 08:07:46,098 [wrapper] pilotpid: 2897938
[2025-06-06 04:07:46] 2025-06-06 08:07:46,100 [wrapper] Pilot exit status: 0
[2025-06-06 04:07:46] 2025-06-06 08:07:46,115 [wrapper] pandaids: 6669237690
[2025-06-06 04:07:46] 2025-06-06 08:07:46,176 [wrapper] cleanup supervisor_pilot 3248765 2897939
[2025-06-06 04:07:46] 2025-06-06 08:07:46,179 [wrapper] Test setup, not cleaning
[2025-06-06 04:07:46] 2025-06-06 08:07:46,182 [wrapper] apfmon messages muted
[2025-06-06 04:07:46] 2025-06-06 08:07:46,184 [wrapper] ==== wrapper stdout END ====
[2025-06-06 04:07:46] 2025-06-06 08:07:46,187 [wrapper] ==== wrapper stderr END ====
[2025-06-06 04:07:46]  *** Error codes and diagnostics ***
[2025-06-06 04:07:46]     "exeErrorCode": 0,
[2025-06-06 04:07:46]     "exeErrorDiag": "",
[2025-06-06 04:07:46]     "pilotErrorCode": 0,
[2025-06-06 04:07:46]     "pilotErrorDiag": "",
[2025-06-06 04:07:46]  *** Listing of results directory ***
[2025-06-06 04:07:46] total 418176
[2025-06-06 04:07:46] -rw-r--r--. 1 boincer umatlas      5111 May 29 00:11 queuedata.json
[2025-06-06 04:07:46] -rw-r--r--. 1 boincer umatlas    495897 May 29 00:11 pilot3.tar.gz
[2025-06-06 04:07:46] -rwx------. 1 boincer umatlas     37140 May 29 00:12 runpilot2-wrapper.sh
[2025-06-06 04:07:46] -rw-r--r--. 1 boincer umatlas       100 Jun  6 02:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 04:07:46] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  6 02:04 run_atlas
[2025-06-06 04:07:46] -rw-r--r--. 1 boincer umatlas       105 Jun  6 02:04 job.xml
[2025-06-06 04:07:46] -rw-r--r--. 2 boincer umatlas 223437019 Jun  6 02:04 EVNT.44871834._003681.pool.root.1
[2025-06-06 04:07:46] drwxrwx--x. 2 boincer umatlas      4096 Jun  6 02:04 shared
[2025-06-06 04:07:46] -rw-r--r--. 2 boincer umatlas    508880 Jun  6 02:04 input.tar.gz
[2025-06-06 04:07:46] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 02:04 start_atlas.sh
[2025-06-06 04:07:46] -rw-r--r--. 1 boincer umatlas         0 Jun  6 02:04 boinc_lockfile
[2025-06-06 04:07:46] -rw-r--r--. 1 boincer umatlas      2559 Jun  6 02:04 pandaJob.out
[2025-06-06 04:07:46] -rw-------. 1 boincer umatlas    988109 Jun  6 02:04 agis_schedconf.cvmfs.json
[2025-06-06 04:07:46] -rw-------. 1 boincer umatlas   1598969 Jun  6 02:04 agis_ddmendpoints.agis.ALL.json
[2025-06-06 04:07:46] drwx------. 4 boincer umatlas      4096 Jun  6 02:04 pilot3
[2025-06-06 04:07:46] -rw-r--r--. 1 boincer umatlas      6658 Jun  6 04:04 init_data.xml
[2025-06-06 04:07:46] -rw-------. 1 boincer umatlas 198826336 Jun  6 04:06 HITS.44871837._094757.pool.root.1
[2025-06-06 04:07:46] -rw-r--r--. 1 boincer umatlas       529 Jun  6 04:06 boinc_task_state.xml
[2025-06-06 04:07:46] -rw-------. 1 boincer umatlas      1043 Jun  6 04:07 memory_monitor_summary.json
[2025-06-06 04:07:46] -rw-------. 1 boincer umatlas    357422 Jun  6 04:07 log.44871837._094757.job.log.tgz.1
[2025-06-06 04:07:46] -rw-------. 1 boincer umatlas      7717 Jun  6 04:07 heartbeat.json
[2025-06-06 04:07:46] -rw-------. 1 boincer umatlas        95 Jun  6 04:07 pilot_heartbeat.json
[2025-06-06 04:07:46] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 04:07 boinc_mmap_file
[2025-06-06 04:07:46] -rw-r--r--. 1 boincer umatlas        27 Jun  6 04:07 wrapper_checkpoint.txt
[2025-06-06 04:07:46] -rw-------. 1 boincer umatlas      4476 Jun  6 04:07 pilotlog.txt
[2025-06-06 04:07:46] -rw-------. 1 boincer umatlas    693847 Jun  6 04:07 log.44871837._094757.job.log.1
[2025-06-06 04:07:46] -rw-------. 1 boincer umatlas       357 Jun  6 04:07 output.list
[2025-06-06 04:07:46] -rw-r--r--. 1 boincer umatlas       620 Jun  6 04:07 runtime_log
[2025-06-06 04:07:46] -rw-------. 1 boincer umatlas   1075200 Jun  6 04:07 result.tar.gz
[2025-06-06 04:07:46] -rw-r--r--. 1 boincer umatlas      8651 Jun  6 04:07 runtime_log.err
[2025-06-06 04:07:46] -rw-------. 1 boincer umatlas       652 Jun  6 04:07 LZVMDmwnje7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7jdKDmOxH1En.diag
[2025-06-06 04:07:46] -rw-r--r--. 1 boincer umatlas     20936 Jun  6 04:07 stderr.txt
[2025-06-06 04:07:46] HITS file was successfully produced:
[2025-06-06 04:07:46] -rw-------. 1 boincer umatlas 198826336 Jun  6 04:06 shared/HITS.pool.root.1
[2025-06-06 04:07:46]  *** Contents of shared directory: ***
[2025-06-06 04:07:46] total 413948
[2025-06-06 04:07:46] -rw-r--r--. 2 boincer umatlas 223437019 Jun  6 02:04 ATLAS.root_0
[2025-06-06 04:07:46] -rw-r--r--. 2 boincer umatlas    508880 Jun  6 02:04 input.tar.gz
[2025-06-06 04:07:46] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 02:04 start_atlas.sh
[2025-06-06 04:07:46] -rw-------. 1 boincer umatlas 198826336 Jun  6 04:06 HITS.pool.root.1
[2025-06-06 04:07:46] -rw-------. 1 boincer umatlas   1075200 Jun  6 04:07 result.tar.gz
04:07:48 (2894211): run_atlas exited; CPU time 60417.033618
04:07:48 (2894211): called boinc_finish(0)

</stderr_txt>
]]>

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