Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:50:24 (1029990): wrapper (7.7.26015): starting
01:50:24 (1029990): wrapper: running run_atlas (--nthreads 10)
[2025-06-06 01:50:24] Arguments: --nthreads 10
[2025-06-06 01:50:24] Threads: 10
[2025-06-06 01:50:24] Checking for CVMFS
[2025-06-06 01:50:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 01:50:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 01:50:24] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 01:50:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 01:50:24] 2.12.6.0 3646663 94301 364380 146844 3 484 19712325 32935936 19977 16776704 1 400175170 99.629 392322106 25597 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-06 01:50:24] CVMFS is ok
[2025-06-06 01:50:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 01:50:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 01:50:24] Further information can be found at the LHC@home message board.
[2025-06-06 01:50:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 01:50:24] Checking for apptainer binary...
[2025-06-06 01:50:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 01:50:24] Running /usr/bin/apptainer --version
[2025-06-06 01:50:25] apptainer version 1.4.1-1.el9
[2025-06-06 01:50:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 01:50:25] c-5-2.aglt2.org
[2025-06-06 01:50:25] apptainer works
[2025-06-06 01:50:25] Set ATHENA_PROC_NUMBER=10
[2025-06-06 01:50:25] Set ATHENA_CORE_NUMBER=10
[2025-06-06 01:50:25] Starting ATLAS job with PandaID=6668947041
[2025-06-06 01:50:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 03:55:04]  *** The last 200 lines of the pilot log: ***
[2025-06-06 03:55:04] 2025-06-06 07:54:48,115 | INFO     | total number of processed events: 400 (read)
[2025-06-06 03:55:04] 2025-06-06 07:54:48,129 | INFO     | executing command: lscpu
[2025-06-06 03:55:04] 2025-06-06 07:54:48,159 | INFO     | monitor loop #533: job 0:6668947041 is in state 'finished'
[2025-06-06 03:55:04] 2025-06-06 07:54:48,159 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 03:55:04] 2025-06-06 07:54:48,182 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 03:55:04] 2025-06-06 07:54:49,498 | INFO     | 7455s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-06 03:55:04] 2025-06-06 07:54:50,662 | INFO     | monitor loop #534: job 0:6668947041 is in state 'finished'
[2025-06-06 03:55:04] 2025-06-06 07:54:50,662 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 03:55:04] 2025-06-06 07:54:51,476 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 03:55:04] 2025-06-06 07:54:51,477 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668947041/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 03:55:04] 2025-06-06 07:54:51,477 | INFO     | extracted standard info from prmon json
[2025-06-06 03:55:04] 2025-06-06 07:54:51,477 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 03:55:04] 2025-06-06 07:54:51,477 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 03:55:04] 2025-06-06 07:54:51,478 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 03:55:04] 2025-06-06 07:54:51,478 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 03:55:04] 2025-06-06 07:54:51,480 | INFO     | fitting pss+swap vs Time
[2025-06-06 03:55:04] 2025-06-06 07:54:51,480 | INFO     | sum of square deviations: 563024846.4918019
[2025-06-06 03:55:04] 2025-06-06 07:54:51,481 | INFO     | sum of deviations: 7695967509.262298
[2025-06-06 03:55:04] 2025-06-06 07:54:51,481 | INFO     | mean x: 1749192755.5081968
[2025-06-06 03:55:04] 2025-06-06 07:54:51,481 | INFO     | mean y: 2498605.2377049183
[2025-06-06 03:55:04] 2025-06-06 07:54:51,481 | INFO     | -- intersect: -23907157776.195343
[2025-06-06 03:55:04] 2025-06-06 07:54:51,481 | INFO     | intersect: -23907157776.195343
[2025-06-06 03:55:04] 2025-06-06 07:54:51,482 | INFO     | chi2: 1.5914902809486176
[2025-06-06 03:55:04] 2025-06-06 07:54:51,482 | INFO     | sum of square deviations: 496595998.99145323
[2025-06-06 03:55:04] 2025-06-06 07:54:51,482 | INFO     | sum of deviations: 7970904143.871799
[2025-06-06 03:55:04] 2025-06-06 07:54:51,482 | INFO     | mean x: 1749192603.008547
[2025-06-06 03:55:04] 2025-06-06 07:54:51,482 | INFO     | mean y: 2499249.128205128
[2025-06-06 03:55:04] 2025-06-06 07:54:51,483 | INFO     | -- intersect: -28073938330.045063
[2025-06-06 03:55:04] 2025-06-06 07:54:51,483 | INFO     | intersect: -28073938330.045063
[2025-06-06 03:55:04] 2025-06-06 07:54:51,483 | INFO     | chi2: 1.5933803203185792
[2025-06-06 03:55:04] 2025-06-06 07:54:51,483 | INFO     | current chi2=1.5933803203185792 (change=-0.11875908967757647 %)
[2025-06-06 03:55:04] 2025-06-06 07:54:51,483 | INFO     | right removable region: 116
[2025-06-06 03:55:04] 2025-06-06 07:54:51,483 | INFO     | sum of square deviations: 496595388.99145323
[2025-06-06 03:55:04] 2025-06-06 07:54:51,483 | INFO     | sum of deviations: -9850590345.452997
[2025-06-06 03:55:04] 2025-06-06 07:54:51,483 | INFO     | mean x: 1749192908.008547
[2025-06-06 03:55:04] 2025-06-06 07:54:51,484 | INFO     | mean y: 2538067.452991453
[2025-06-06 03:55:04] 2025-06-06 07:54:51,484 | INFO     | -- intersect: 34699966102.29202
[2025-06-06 03:55:04] 2025-06-06 07:54:51,484 | INFO     | intersect: 34699966102.29202
[2025-06-06 03:55:04] 2025-06-06 07:54:51,484 | INFO     | chi2: 0.14011047897131215
[2025-06-06 03:55:04] 2025-06-06 07:54:51,484 | INFO     | current chi2=0.14011047897131215 (change=91.19627178069862 %)
[2025-06-06 03:55:04] 2025-06-06 07:54:51,484 | INFO     | sum of square deviations: 435607893.99107105
[2025-06-06 03:55:04] 2025-06-06 07:54:51,484 | INFO     | sum of deviations: -6027355905.401787
[2025-06-06 03:55:04] 2025-06-06 07:54:51,484 | INFO     | mean x: 1749193060.5089285
[2025-06-06 03:55:04] 2025-06-06 07:54:51,484 | INFO     | mean y: 2528372.901785714
[2025-06-06 03:55:04] 2025-06-06 07:54:51,485 | INFO     | -- intersect: 24205508319.730812
[2025-06-06 03:55:04] 2025-06-06 07:54:51,485 | INFO     | intersect: 24205508319.730812
[2025-06-06 03:55:04] 2025-06-06 07:54:51,485 | INFO     | chi2: 0.10570293851465415
[2025-06-06 03:55:04] 2025-06-06 07:54:51,485 | INFO     | current chi2=0.10570293851465415 (change=24.557435467552004 %)
[2025-06-06 03:55:04] 2025-06-06 07:54:51,485 | INFO     | left removable region: 20
[2025-06-06 03:55:04] 2025-06-06 07:54:51,485 | INFO     | sum of square deviations: 274309741.98958343
[2025-06-06 03:55:04] 2025-06-06 07:54:51,485 | INFO     | sum of deviations: 891075467.5833334
[2025-06-06 03:55:04] 2025-06-06 07:54:51,485 | INFO     | mean x: 1749193182.5104167
[2025-06-06 03:55:04] 2025-06-06 07:54:51,485 | INFO     | mean y: 2511948.4166666665
[2025-06-06 03:55:04] 2025-06-06 07:54:51,486 | INFO     | -- intersect: -5679616297.171625
[2025-06-06 03:55:04] 2025-06-06 07:54:51,486 | INFO     | intersect: -5679616297.171625
[2025-06-06 03:55:04] 2025-06-06 07:54:51,486 | INFO     | chi2: 0.004426437212867213
[2025-06-06 03:55:04] 2025-06-06 07:54:51,486 | INFO     | -- intersect: -5679616297.171625
[2025-06-06 03:55:04] 2025-06-06 07:54:51,486 | INFO     | current memory leak: 3.25 B/s (using 96 data points, chi2=0.00)
[2025-06-06 03:55:04] 2025-06-06 07:54:51,487 | INFO     | ..............................
[2025-06-06 03:55:04] 2025-06-06 07:54:51,487 | INFO     | . Timing measurements:
[2025-06-06 03:55:04] 2025-06-06 07:54:51,487 | INFO     | . get job = 0 s
[2025-06-06 03:55:04] 2025-06-06 07:54:51,487 | INFO     | . initial setup = 3 s
[2025-06-06 03:55:04] 2025-06-06 07:54:51,487 | INFO     | . payload setup = 7 s
[2025-06-06 03:55:04] 2025-06-06 07:54:51,487 | INFO     | . stage-in = 0 s
[2025-06-06 03:55:04] 2025-06-06 07:54:51,487 | INFO     | . payload execution = 7418 s
[2025-06-06 03:55:04] 2025-06-06 07:54:51,487 | INFO     | . stage-out = 0 s
[2025-06-06 03:55:04] 2025-06-06 07:54:51,487 | INFO     | . log creation = 0 s
[2025-06-06 03:55:04] 2025-06-06 07:54:51,488 | INFO     | ..............................
[2025-06-06 03:55:04] 2025-06-06 07:54:51,687 | INFO     | 
[2025-06-06 03:55:04] 2025-06-06 07:54:51,687 | INFO     | job summary report
[2025-06-06 03:55:04] 2025-06-06 07:54:51,687 | INFO     | --------------------------------------------------
[2025-06-06 03:55:04] 2025-06-06 07:54:51,687 | INFO     | PanDA job id: 6668947041
[2025-06-06 03:55:04] 2025-06-06 07:54:51,687 | INFO     | task id: 44871837
[2025-06-06 03:55:04] 2025-06-06 07:54:51,687 | INFO     | errors: (none)
[2025-06-06 03:55:04] 2025-06-06 07:54:51,687 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 03:55:04] 2025-06-06 07:54:51,688 | INFO     | pilot state: finished 
[2025-06-06 03:55:04] 2025-06-06 07:54:51,688 | INFO     | transexitcode: 0
[2025-06-06 03:55:04] 2025-06-06 07:54:51,688 | INFO     | exeerrorcode: 0
[2025-06-06 03:55:04] 2025-06-06 07:54:51,688 | INFO     | exeerrordiag: 
[2025-06-06 03:55:04] 2025-06-06 07:54:51,688 | INFO     | exitcode: 0
[2025-06-06 03:55:04] 2025-06-06 07:54:51,688 | INFO     | exitmsg: OK
[2025-06-06 03:55:04] 2025-06-06 07:54:51,688 | INFO     | cpuconsumptiontime: 63383 s
[2025-06-06 03:55:04] 2025-06-06 07:54:51,688 | INFO     | nevents: 400
[2025-06-06 03:55:04] 2025-06-06 07:54:51,688 | INFO     | neventsw: 0
[2025-06-06 03:55:04] 2025-06-06 07:54:51,688 | INFO     | pid: 1040056
[2025-06-06 03:55:04] 2025-06-06 07:54:51,688 | INFO     | pgrp: 1040056
[2025-06-06 03:55:04] 2025-06-06 07:54:51,688 | INFO     | corecount: 10
[2025-06-06 03:55:04] 2025-06-06 07:54:51,689 | INFO     | event service: False
[2025-06-06 03:55:04] 2025-06-06 07:54:51,689 | INFO     | sizes: {0: 2397391, 5: 2397597, 11: 2397653, 7430: 2424779, 7432: 2433720, 7435: 2433776, 7439: 2434074}
[2025-06-06 03:55:04] 2025-06-06 07:54:51,689 | INFO     | --------------------------------------------------
[2025-06-06 03:55:04] 2025-06-06 07:54:51,689 | INFO     | 
[2025-06-06 03:55:04] 2025-06-06 07:54:51,689 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 03:55:04] 2025-06-06 07:54:51,708 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 03:55:04] 2025-06-06 07:54:51,708 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 03:55:04] 2025-06-06 07:54:51,708 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 03:55:04] 2025-06-06 07:54:51,708 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 03:55:04] 2025-06-06 07:54:51,708 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 03:55:04] 2025-06-06 07:54:51,708 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 03:55:04] 2025-06-06 07:54:51,709 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 03:55:04] 2025-06-06 07:54:51,709 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 03:55:04] 2025-06-06 07:54:51,709 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 03:55:04] 2025-06-06 07:54:51,709 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 03:55:04] 2025-06-06 07:54:51,709 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 03:55:04] 2025-06-06 07:54:51,709 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 03:55:04] 2025-06-06 07:54:51,709 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 03:55:04] 2025-06-06 07:54:51,709 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 03:55:04] 2025-06-06 07:54:51,709 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 03:55:04] 2025-06-06 07:54:51,710 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 03:55:04] 2025-06-06 07:54:51,710 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 03:55:04] 2025-06-06 07:54:51,710 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 03:55:04] 2025-06-06 07:54:51,710 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 03:55:04] 2025-06-06 07:54:51,710 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 03:55:04] 2025-06-06 07:54:51,710 | INFO     | job 6668947041 has completed (purged errors)
[2025-06-06 03:55:04] 2025-06-06 07:54:51,710 | INFO     | overall cleanup function is called
[2025-06-06 03:55:04] 2025-06-06 07:54:52,718 | INFO     | --- collectZombieJob: --- 10, [1040056]
[2025-06-06 03:55:04] 2025-06-06 07:54:52,719 | INFO     | zombie collector waiting for pid 1040056
[2025-06-06 03:55:04] 2025-06-06 07:54:52,719 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 03:55:04] 2025-06-06 07:54:52,719 | INFO     | collected zombie processes
[2025-06-06 03:55:04] 2025-06-06 07:54:52,719 | INFO     | will attempt to kill all subprocesses of pid=1040056
[2025-06-06 03:55:04] 2025-06-06 07:54:53,071 | INFO     | process IDs to be killed: [1040056] (in reverse order)
[2025-06-06 03:55:04] 2025-06-06 07:54:53,175 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 03:55:04] 2025-06-06 07:54:53,175 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 03:55:04] 2025-06-06 07:54:53,184 | INFO     | did not find any defunct processes belonging to 1040056
[2025-06-06 03:55:04] 2025-06-06 07:54:53,193 | INFO     | did not find any defunct processes belonging to 1040056
[2025-06-06 03:55:04] 2025-06-06 07:54:53,193 | INFO     | ready for new job
[2025-06-06 03:55:04] 2025-06-06 07:54:53,193 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 03:55:04] 2025-06-06 07:54:53,194 | INFO     | **************************************
[2025-06-06 03:55:04] 2025-06-06 07:54:53,194 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 03:55:04] 2025-06-06 07:54:53,194 | INFO     | **************************************
[2025-06-06 03:55:04] 2025-06-06 07:54:53,194 | INFO     | 
[2025-06-06 03:55:04] 2025-06-06 07:54:53,207 | INFO     | architecture information:
[2025-06-06 03:55:04] 2025-06-06 07:54:53,207 | INFO     | executing command: cat /etc/os-release
[2025-06-06 03:55:04] 2025-06-06 07:54:53,221 | INFO     | cat /etc/os-release:
[2025-06-06 03:55:04] NAME="CentOS Linux"
[2025-06-06 03:55:04] VERSION="7 (Core)"
[2025-06-06 03:55:04] ID="centos"
[2025-06-06 03:55:04] ID_LIKE="rhel fedora"
[2025-06-06 03:55:04] VERSION_ID="7"
[2025-06-06 03:55:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 03:55:04] ANSI_COLOR="0;31"
[2025-06-06 03:55:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 03:55:04] HOME_URL="https://www.centos.org/"
[2025-06-06 03:55:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 03:55:04] 
[2025-06-06 03:55:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 03:55:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 03:55:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 03:55:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 03:55:04] 
[2025-06-06 03:55:04] 2025-06-06 07:54:53,222 | INFO     | **************************************
[2025-06-06 03:55:04] 2025-06-06 07:54:53,725 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 03:55:04] 2025-06-06 07:54:53,740 | INFO     | sufficient remaining disk space (76561776640 B)
[2025-06-06 03:55:04] 2025-06-06 07:54:53,741 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 03:55:04] 2025-06-06 07:54:53,741 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 03:55:04] 2025-06-06 07:54:53,741 | INFO     | update_server=False
[2025-06-06 03:55:04] 2025-06-06 07:54:53,741 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 03:55:04] 2025-06-06 07:54:53,741 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 03:55:04] 2025-06-06 07:54:54,170 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 03:55:04] 2025-06-06 07:54:54,170 | INFO     | aborting loop
[2025-06-06 03:55:04] 2025-06-06 07:54:54,515 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 03:55:04] 2025-06-06 07:54:54,515 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 03:55:04] 2025-06-06 07:54:54,515 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 03:55:04] 2025-06-06 07:54:54,566 | INFO     | all payload control threads have been joined
[2025-06-06 03:55:04] 2025-06-06 07:54:54,674 | INFO     | all data control threads have been joined
[2025-06-06 03:55:04] 2025-06-06 07:54:54,746 | INFO     | [job] retrieve thread has finished
[2025-06-06 03:55:04] 2025-06-06 07:54:54,862 | INFO     | [job] validate thread has finished
[2025-06-06 03:55:04] 2025-06-06 07:54:55,086 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 03:55:04] 2025-06-06 07:54:55,096 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 03:55:04] 2025-06-06 07:54:55,175 | INFO     | [job] job monitor thread has finished
[2025-06-06 03:55:04] 2025-06-06 07:54:55,188 | INFO     | [payload] failed_post thread has finished
[2025-06-06 03:55:04] 2025-06-06 07:54:55,267 | INFO     | all job control threads have been joined
[2025-06-06 03:55:04] 2025-06-06 07:54:55,455 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 03:55:04] 2025-06-06 07:54:55,571 | INFO     | [payload] control thread has finished
[2025-06-06 03:55:04] 2025-06-06 07:54:55,600 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 03:55:04] 2025-06-06 07:54:55,679 | INFO     | [data] control thread has finished
[2025-06-06 03:55:04] 2025-06-06 07:54:55,751 | INFO     | [data] copytool_in thread has finished
[2025-06-06 03:55:04] 2025-06-06 07:54:56,203 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 03:55:04] 2025-06-06 07:54:56,234 | INFO     | [payload] validate_post thread has finished
[2025-06-06 03:55:04] 2025-06-06 07:54:56,272 | INFO     | [job] control thread has finished
[2025-06-06 03:55:04] 2025-06-06 07:54:56,569 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 03:55:04] 2025-06-06 07:54:57,091 | INFO     | [data] copytool_out thread has finished
[2025-06-06 03:55:04] 2025-06-06 07:54:57,575 | INFO     | [job] queue monitor thread has finished
[2025-06-06 03:55:04] 2025-06-06 07:54:57,747 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 03:55:04] 2025-06-06 07:54:58,895 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140663936526144)>', '<ExcThread(monitor, started 140663442097920)>']
[2025-06-06 03:55:04] 2025-06-06 07:54:59,535 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 03:55:04] 2025-06-06 07:54:59,535 | INFO     | [monitor] control thread has ended
[2025-06-06 03:55:04] 2025-06-06 07:55:03,920 | INFO     | all workflow threads have been joined
[2025-06-06 03:55:04] 2025-06-06 07:55:03,920 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 03:55:04] 2025-06-06 07:55:03,920 | INFO     | traces error code: 0
[2025-06-06 03:55:04] 2025-06-06 07:55:03,921 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 03:55:04] 2025-06-06 07:55:04,074 [wrapper] ==== pilot stdout END ====
[2025-06-06 03:55:04] 2025-06-06 07:55:04,077 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 03:55:04] 2025-06-06 07:55:04,079 [wrapper] pilotpid: 1033625
[2025-06-06 03:55:04] 2025-06-06 07:55:04,082 [wrapper] Pilot exit status: 0
[2025-06-06 03:55:04] 2025-06-06 07:55:04,092 [wrapper] pandaids: 6668947041
[2025-06-06 03:55:04] 2025-06-06 07:55:04,155 [wrapper] cleanup supervisor_pilot 1598294 1033626
[2025-06-06 03:55:04] 2025-06-06 07:55:04,158 [wrapper] Test setup, not cleaning
[2025-06-06 03:55:04] 2025-06-06 07:55:04,161 [wrapper] apfmon messages muted
[2025-06-06 03:55:04] 2025-06-06 07:55:04,164 [wrapper] ==== wrapper stdout END ====
[2025-06-06 03:55:04] 2025-06-06 07:55:04,166 [wrapper] ==== wrapper stderr END ====
[2025-06-06 03:55:04]  *** Error codes and diagnostics ***
[2025-06-06 03:55:04]     "exeErrorCode": 0,
[2025-06-06 03:55:04]     "exeErrorDiag": "",
[2025-06-06 03:55:04]     "pilotErrorCode": 0,
[2025-06-06 03:55:04]     "pilotErrorDiag": "",
[2025-06-06 03:55:04]  *** Listing of results directory ***
[2025-06-06 03:55:04] total 418220
[2025-06-06 03:55:04] -rw-r--r--. 1 boincer umatlas    495897 May 28 17:08 pilot3.tar.gz
[2025-06-06 03:55:04] -rw-r--r--. 1 boincer umatlas      5111 May 28 17:35 queuedata.json
[2025-06-06 03:55:04] -rwx------. 1 boincer umatlas     37140 May 28 17:36 runpilot2-wrapper.sh
[2025-06-06 03:55:04] -rw-r--r--. 1 boincer umatlas       100 Jun  6 01:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 03:55:04] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  6 01:50 run_atlas
[2025-06-06 03:55:04] -rw-r--r--. 1 boincer umatlas       105 Jun  6 01:50 job.xml
[2025-06-06 03:55:04] -rw-r--r--. 2 boincer umatlas 222513213 Jun  6 01:50 EVNT.44871834._003536.pool.root.1
[2025-06-06 03:55:04] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 01:50 start_atlas.sh
[2025-06-06 03:55:04] drwxrwx--x. 2 boincer umatlas      4096 Jun  6 01:50 shared
[2025-06-06 03:55:04] -rw-r--r--. 2 boincer umatlas    508881 Jun  6 01:50 input.tar.gz
[2025-06-06 03:55:04] -rw-r--r--. 1 boincer umatlas         0 Jun  6 01:50 boinc_lockfile
[2025-06-06 03:55:04] -rw-r--r--. 1 boincer umatlas      2558 Jun  6 01:50 pandaJob.out
[2025-06-06 03:55:04] -rw-------. 1 boincer umatlas    988109 Jun  6 01:50 agis_schedconf.cvmfs.json
[2025-06-06 03:55:04] -rw-------. 1 boincer umatlas   1598969 Jun  6 01:50 agis_ddmendpoints.agis.ALL.json
[2025-06-06 03:55:04] drwx------. 4 boincer umatlas      4096 Jun  6 01:50 pilot3
[2025-06-06 03:55:04] -rw-r--r--. 1 boincer umatlas      6672 Jun  6 03:45 init_data.xml
[2025-06-06 03:55:04] -rw-------. 1 boincer umatlas 199800063 Jun  6 03:54 HITS.44871837._090883.pool.root.1
[2025-06-06 03:55:04] -rw-r--r--. 1 boincer umatlas       529 Jun  6 03:54 boinc_task_state.xml
[2025-06-06 03:55:04] -rw-------. 1 boincer umatlas      1047 Jun  6 03:54 memory_monitor_summary.json
[2025-06-06 03:55:04] -rw-------. 1 boincer umatlas    359046 Jun  6 03:54 log.44871837._090883.job.log.tgz.1
[2025-06-06 03:55:04] -rw-------. 1 boincer umatlas        95 Jun  6 03:54 pilot_heartbeat.json
[2025-06-06 03:55:04] -rw-------. 1 boincer umatlas      7719 Jun  6 03:54 heartbeat.json
[2025-06-06 03:55:04] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 03:55 boinc_mmap_file
[2025-06-06 03:55:04] -rw-------. 1 boincer umatlas      4353 Jun  6 03:55 pilotlog.txt
[2025-06-06 03:55:04] -rw-r--r--. 1 boincer umatlas        27 Jun  6 03:55 wrapper_checkpoint.txt
[2025-06-06 03:55:04] -rw-------. 1 boincer umatlas    694986 Jun  6 03:55 log.44871837._090883.job.log.1
[2025-06-06 03:55:04] -rw-------. 1 boincer umatlas       357 Jun  6 03:55 output.list
[2025-06-06 03:55:04] -rw-r--r--. 1 boincer umatlas       620 Jun  6 03:55 runtime_log
[2025-06-06 03:55:04] -rw-------. 1 boincer umatlas   1075200 Jun  6 03:55 result.tar.gz
[2025-06-06 03:55:04] -rw-------. 1 boincer umatlas       655 Jun  6 03:55 us6NDm5cde7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmb8cKDm0WFaXn.diag
[2025-06-06 03:55:04] -rw-r--r--. 1 boincer umatlas      8646 Jun  6 03:55 runtime_log.err
[2025-06-06 03:55:04] -rw-r--r--. 1 boincer umatlas     21204 Jun  6 03:55 stderr.txt
[2025-06-06 03:55:04] HITS file was successfully produced:
[2025-06-06 03:55:04] -rw-------. 1 boincer umatlas 199800063 Jun  6 03:54 shared/HITS.pool.root.1
[2025-06-06 03:55:04]  *** Contents of shared directory: ***
[2025-06-06 03:55:04] total 413992
[2025-06-06 03:55:04] -rw-r--r--. 2 boincer umatlas 222513213 Jun  6 01:50 ATLAS.root_0
[2025-06-06 03:55:04] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 01:50 start_atlas.sh
[2025-06-06 03:55:04] -rw-r--r--. 2 boincer umatlas    508881 Jun  6 01:50 input.tar.gz
[2025-06-06 03:55:04] -rw-------. 1 boincer umatlas 199800063 Jun  6 03:54 HITS.pool.root.1
[2025-06-06 03:55:04] -rw-------. 1 boincer umatlas   1075200 Jun  6 03:55 result.tar.gz
03:55:26 (1029990): run_atlas exited; CPU time 63564.135689
03:55:26 (1029990): called boinc_finish(0)

</stderr_txt>
]]>

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