Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:22:12 (1920916): wrapper (7.7.26015): starting
01:22:12 (1920916): wrapper: running run_atlas (--nthreads 10)
[2025-06-06 01:22:12] Arguments: --nthreads 10
[2025-06-06 01:22:12] Threads: 10
[2025-06-06 01:22:12] Checking for CVMFS
[2025-06-06 01:22:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 01:22:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 01:22:12] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 01:22:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 01:22:12] 2.12.6.0 8362 2276 174692 146844 2 214 15536194 21551104 15674 16776704 0 7381099 99.119 16661373 30906 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-06 01:22:12] CVMFS is ok
[2025-06-06 01:22:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 01:22:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 01:22:12] Further information can be found at the LHC@home message board.
[2025-06-06 01:22:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 01:22:12] Checking for apptainer binary...
[2025-06-06 01:22:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 01:22:12] Running /usr/bin/apptainer --version
[2025-06-06 01:22:12] apptainer version 1.4.1-1.el9
[2025-06-06 01:22:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 01:22:13] c-16-30.aglt2.org
[2025-06-06 01:22:13] apptainer works
[2025-06-06 01:22:13] Set ATHENA_PROC_NUMBER=10
[2025-06-06 01:22:13] Set ATHENA_CORE_NUMBER=10
[2025-06-06 01:22:13] Starting ATLAS job with PandaID=6668980572
[2025-06-06 01:22:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/condor/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 07:05:29]  *** The last 200 lines of the pilot log: ***
[2025-06-06 07:05:29] 2025-06-06 11:05:07,676 | INFO     | 20562s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-06 07:05:29] 2025-06-06 11:05:08,312 | INFO     | monitor loop #1435: job 0:6668980572 is in state 'finished'
[2025-06-06 07:05:29] 2025-06-06 11:05:08,312 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 07:05:29] 2025-06-06 11:05:10,815 | INFO     | monitor loop #1436: job 0:6668980572 is in state 'finished'
[2025-06-06 07:05:29] 2025-06-06 11:05:10,815 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 07:05:29] 2025-06-06 11:05:13,047 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-06 07:05:29] 2025-06-06 11:05:13,047 | INFO     | using path: /var/lib/condor/boinchome/slots/0/PanDA_Pilot-6668980572/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 07:05:29] 2025-06-06 11:05:13,049 | INFO     | extracted standard info from prmon json
[2025-06-06 07:05:29] 2025-06-06 11:05:13,049 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 07:05:29] 2025-06-06 11:05:13,049 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 07:05:29] 2025-06-06 11:05:13,050 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 07:05:29] 2025-06-06 11:05:13,050 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 07:05:29] 2025-06-06 11:05:13,061 | INFO     | fitting pss+swap vs Time
[2025-06-06 07:05:29] 2025-06-06 11:05:13,062 | INFO     | sum of square deviations: 11762276143.925545
[2025-06-06 07:05:29] 2025-06-06 11:05:13,066 | INFO     | sum of deviations: -99671403853.6339
[2025-06-06 07:05:29] 2025-06-06 11:05:13,066 | INFO     | mean x: 1749197610.514881
[2025-06-06 07:05:29] 2025-06-06 11:05:13,066 | INFO     | mean y: 2232640.026785714
[2025-06-06 07:05:29] 2025-06-06 11:05:13,066 | INFO     | -- intersect: 14824617297.904251
[2025-06-06 07:05:29] 2025-06-06 11:05:13,067 | INFO     | intersect: 14824617297.904251
[2025-06-06 07:05:29] 2025-06-06 11:05:13,067 | INFO     | chi2: 2.324226802130295
[2025-06-06 07:05:29] 2025-06-06 11:05:13,068 | INFO     | sum of square deviations: 11244947038.924427
[2025-06-06 07:05:29] 2025-06-06 11:05:13,072 | INFO     | sum of deviations: -83665897798.45314
[2025-06-06 07:05:29] 2025-06-06 11:05:13,072 | INFO     | mean x: 1749197458.0151057
[2025-06-06 07:05:29] 2025-06-06 11:05:13,072 | INFO     | mean y: 2237341.090634441
[2025-06-06 07:05:29] 2025-06-06 11:05:13,073 | INFO     | -- intersect: 13016809596.968863
[2025-06-06 07:05:29] 2025-06-06 11:05:13,073 | INFO     | intersect: 13016809596.968863
[2025-06-06 07:05:29] 2025-06-06 11:05:13,073 | INFO     | chi2: 2.229318220951339
[2025-06-06 07:05:29] 2025-06-06 11:05:13,074 | INFO     | current chi2=2.229318220951339 (change=4.083447497118885 %)
[2025-06-06 07:05:29] 2025-06-06 11:05:13,074 | INFO     | right removable region: 330
[2025-06-06 07:05:29] 2025-06-06 11:05:13,074 | INFO     | sum of square deviations: 11244943988.924427
[2025-06-06 07:05:29] 2025-06-06 11:05:13,078 | INFO     | sum of deviations: -149901752408.64948
[2025-06-06 07:05:29] 2025-06-06 11:05:13,079 | INFO     | mean x: 1749197763.0151057
[2025-06-06 07:05:29] 2025-06-06 11:05:13,079 | INFO     | mean y: 2247371.1299093654
[2025-06-06 07:05:29] 2025-06-06 11:05:13,079 | INFO     | -- intersect: 23320087837.34409
[2025-06-06 07:05:29] 2025-06-06 11:05:13,079 | INFO     | intersect: 23320087837.34409
[2025-06-06 07:05:29] 2025-06-06 11:05:13,080 | INFO     | chi2: 0.7588437084131582
[2025-06-06 07:05:29] 2025-06-06 11:05:13,080 | INFO     | current chi2=0.7588437084131582 (change=67.35070313630186 %)
[2025-06-06 07:05:29] 2025-06-06 11:05:13,081 | INFO     | sum of square deviations: 10743007471.423279
[2025-06-06 07:05:29] 2025-06-06 11:05:13,085 | INFO     | sum of deviations: -146547719305.19022
[2025-06-06 07:05:29] 2025-06-06 11:05:13,085 | INFO     | mean x: 1749197915.5153375
[2025-06-06 07:05:29] 2025-06-06 11:05:13,085 | INFO     | mean y: 2246325.13803681
[2025-06-06 07:05:29] 2025-06-06 11:05:13,085 | INFO     | -- intersect: 23863438436.75484
[2025-06-06 07:05:29] 2025-06-06 11:05:13,086 | INFO     | intersect: 23863438436.75484
[2025-06-06 07:05:29] 2025-06-06 11:05:13,086 | INFO     | chi2: 0.7052821800258264
[2025-06-06 07:05:29] 2025-06-06 11:05:13,086 | INFO     | current chi2=0.7052821800258264 (change=7.05830829108881 %)
[2025-06-06 07:05:29] 2025-06-06 11:05:13,087 | INFO     | left removable region: 20
[2025-06-06 07:05:29] 2025-06-06 11:05:13,087 | INFO     | sum of square deviations: 9237564071.419312
[2025-06-06 07:05:29] 2025-06-06 11:05:13,091 | INFO     | sum of deviations: -98756947959.7096
[2025-06-06 07:05:29] 2025-06-06 11:05:13,091 | INFO     | mean x: 1749198037.516129
[2025-06-06 07:05:29] 2025-06-06 11:05:13,091 | INFO     | mean y: 2241665.2419354836
[2025-06-06 07:05:29] 2025-06-06 11:05:13,091 | INFO     | -- intersect: 18702567663.161095
[2025-06-06 07:05:29] 2025-06-06 11:05:13,092 | INFO     | intersect: 18702567663.161095
[2025-06-06 07:05:29] 2025-06-06 11:05:13,092 | INFO     | chi2: 0.5422729978617681
[2025-06-06 07:05:29] 2025-06-06 11:05:13,093 | INFO     | -- intersect: 18702567663.161095
[2025-06-06 07:05:29] 2025-06-06 11:05:13,093 | INFO     | current memory leak: -10.69 B/s (using 310 data points, chi2=0.54)
[2025-06-06 07:05:29] 2025-06-06 11:05:13,094 | INFO     | ..............................
[2025-06-06 07:05:29] 2025-06-06 11:05:13,094 | INFO     | . Timing measurements:
[2025-06-06 07:05:29] 2025-06-06 11:05:13,094 | INFO     | . get job = 0 s
[2025-06-06 07:05:29] 2025-06-06 11:05:13,094 | INFO     | . initial setup = 14 s
[2025-06-06 07:05:29] 2025-06-06 11:05:13,094 | INFO     | . payload setup = 10 s
[2025-06-06 07:05:29] 2025-06-06 11:05:13,095 | INFO     | . stage-in = 0 s
[2025-06-06 07:05:29] 2025-06-06 11:05:13,095 | INFO     | . payload execution = 20496 s
[2025-06-06 07:05:29] 2025-06-06 11:05:13,095 | INFO     | . stage-out = 13 s
[2025-06-06 07:05:29] 2025-06-06 11:05:13,095 | INFO     | . log creation = 0 s
[2025-06-06 07:05:29] 2025-06-06 11:05:13,095 | INFO     | ..............................
[2025-06-06 07:05:29] 2025-06-06 11:05:13,703 | INFO     | 
[2025-06-06 07:05:29] 2025-06-06 11:05:13,703 | INFO     | job summary report
[2025-06-06 07:05:29] 2025-06-06 11:05:13,703 | INFO     | --------------------------------------------------
[2025-06-06 07:05:29] 2025-06-06 11:05:13,703 | INFO     | PanDA job id: 6668980572
[2025-06-06 07:05:29] 2025-06-06 11:05:13,703 | INFO     | task id: 44871837
[2025-06-06 07:05:29] 2025-06-06 11:05:13,704 | INFO     | errors: (none)
[2025-06-06 07:05:29] 2025-06-06 11:05:13,704 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 07:05:29] 2025-06-06 11:05:13,704 | INFO     | pilot state: finished 
[2025-06-06 07:05:29] 2025-06-06 11:05:13,704 | INFO     | transexitcode: 0
[2025-06-06 07:05:29] 2025-06-06 11:05:13,704 | INFO     | exeerrorcode: 0
[2025-06-06 07:05:29] 2025-06-06 11:05:13,704 | INFO     | exeerrordiag: 
[2025-06-06 07:05:29] 2025-06-06 11:05:13,705 | INFO     | exitcode: 0
[2025-06-06 07:05:29] 2025-06-06 11:05:13,705 | INFO     | exitmsg: OK
[2025-06-06 07:05:29] 2025-06-06 11:05:13,705 | INFO     | cpuconsumptiontime: 100549 s
[2025-06-06 07:05:29] 2025-06-06 11:05:13,705 | INFO     | nevents: 400
[2025-06-06 07:05:29] 2025-06-06 11:05:13,705 | INFO     | neventsw: 0
[2025-06-06 07:05:29] 2025-06-06 11:05:13,705 | INFO     | pid: 1936040
[2025-06-06 07:05:29] 2025-06-06 11:05:13,705 | INFO     | pgrp: 1936040
[2025-06-06 07:05:29] 2025-06-06 11:05:13,706 | INFO     | corecount: 10
[2025-06-06 07:05:29] 2025-06-06 11:05:13,706 | INFO     | event service: False
[2025-06-06 07:05:29] 2025-06-06 11:05:13,706 | INFO     | sizes: {0: 2397232, 1: 2397431, 6: 2397637, 12: 2397665, 20510: 2430860, 20524: 2439823, 20526: 2440007, 20536: 2440177}
[2025-06-06 07:05:29] 2025-06-06 11:05:13,706 | INFO     | --------------------------------------------------
[2025-06-06 07:05:29] 2025-06-06 11:05:13,706 | INFO     | 
[2025-06-06 07:05:29] 2025-06-06 11:05:13,706 | INFO     | executing command: ls -lF /var/lib/condor/boinchome/slots/0
[2025-06-06 07:05:29] 2025-06-06 11:05:13,729 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 07:05:29] 2025-06-06 11:05:13,730 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 07:05:29] 2025-06-06 11:05:13,730 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 07:05:29] 2025-06-06 11:05:13,730 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 07:05:29] 2025-06-06 11:05:13,730 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 07:05:29] 2025-06-06 11:05:13,730 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 07:05:29] 2025-06-06 11:05:13,730 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 07:05:29] 2025-06-06 11:05:13,730 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 07:05:29] 2025-06-06 11:05:13,731 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 07:05:29] 2025-06-06 11:05:13,731 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 07:05:29] 2025-06-06 11:05:13,731 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 07:05:29] 2025-06-06 11:05:13,731 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 07:05:29] 2025-06-06 11:05:13,731 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 07:05:29] 2025-06-06 11:05:13,731 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 07:05:29] 2025-06-06 11:05:13,732 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 07:05:29] 2025-06-06 11:05:13,732 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 07:05:29] 2025-06-06 11:05:13,732 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 07:05:29] 2025-06-06 11:05:13,732 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 07:05:29] 2025-06-06 11:05:13,732 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 07:05:29] 2025-06-06 11:05:13,732 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 07:05:29] 2025-06-06 11:05:13,733 | INFO     | job 6668980572 has completed (purged errors)
[2025-06-06 07:05:29] 2025-06-06 11:05:13,733 | INFO     | overall cleanup function is called
[2025-06-06 07:05:29] 2025-06-06 11:05:14,742 | INFO     | --- collectZombieJob: --- 10, [1936040]
[2025-06-06 07:05:29] 2025-06-06 11:05:14,742 | INFO     | zombie collector waiting for pid 1936040
[2025-06-06 07:05:29] 2025-06-06 11:05:14,742 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 07:05:29] 2025-06-06 11:05:14,742 | INFO     | collected zombie processes
[2025-06-06 07:05:29] 2025-06-06 11:05:14,742 | INFO     | will attempt to kill all subprocesses of pid=1936040
[2025-06-06 07:05:29] 2025-06-06 11:05:15,969 | INFO     | PID=1927752 has CPU usage=9.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-06 07:05:29] 2025-06-06 11:05:15,969 | INFO     | .. there are 18 such processes running
[2025-06-06 07:05:29] 2025-06-06 11:05:16,003 | INFO     | process IDs to be killed: [1936040] (in reverse order)
[2025-06-06 07:05:29] 2025-06-06 11:05:16,246 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 07:05:29] 2025-06-06 11:05:16,247 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 07:05:29] 2025-06-06 11:05:16,262 | INFO     | did not find any defunct processes belonging to 1936040
[2025-06-06 07:05:29] 2025-06-06 11:05:16,281 | INFO     | did not find any defunct processes belonging to 1936040
[2025-06-06 07:05:29] 2025-06-06 11:05:16,282 | INFO     | ready for new job
[2025-06-06 07:05:29] 2025-06-06 11:05:16,282 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 07:05:29] 2025-06-06 11:05:16,285 | INFO     | **************************************
[2025-06-06 07:05:29] 2025-06-06 11:05:16,286 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 07:05:29] 2025-06-06 11:05:16,286 | INFO     | **************************************
[2025-06-06 07:05:29] 2025-06-06 11:05:16,286 | INFO     | 
[2025-06-06 07:05:29] 2025-06-06 11:05:16,301 | INFO     | architecture information:
[2025-06-06 07:05:29] 2025-06-06 11:05:16,305 | INFO     | executing command: cat /etc/os-release
[2025-06-06 07:05:29] 2025-06-06 11:05:16,325 | INFO     | cat /etc/os-release:
[2025-06-06 07:05:29] NAME="CentOS Linux"
[2025-06-06 07:05:29] VERSION="7 (Core)"
[2025-06-06 07:05:29] ID="centos"
[2025-06-06 07:05:29] ID_LIKE="rhel fedora"
[2025-06-06 07:05:29] VERSION_ID="7"
[2025-06-06 07:05:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 07:05:29] ANSI_COLOR="0;31"
[2025-06-06 07:05:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 07:05:29] HOME_URL="https://www.centos.org/"
[2025-06-06 07:05:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 07:05:29] 
[2025-06-06 07:05:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 07:05:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 07:05:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 07:05:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 07:05:29] 
[2025-06-06 07:05:29] 2025-06-06 11:05:16,325 | INFO     | **************************************
[2025-06-06 07:05:29] 2025-06-06 11:05:16,828 | INFO     | executing command: df -mP /var/lib/condor/boinchome/slots/0
[2025-06-06 07:05:29] 2025-06-06 11:05:16,847 | INFO     | sufficient remaining disk space (1813014118400 B)
[2025-06-06 07:05:29] 2025-06-06 11:05:16,847 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 07:05:29] 2025-06-06 11:05:16,848 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 07:05:29] 2025-06-06 11:05:16,848 | INFO     | update_server=False
[2025-06-06 07:05:29] 2025-06-06 11:05:16,848 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 07:05:29] 2025-06-06 11:05:16,848 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 07:05:29] 2025-06-06 11:05:16,849 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 07:05:29] 2025-06-06 11:05:16,849 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 07:05:29] 2025-06-06 11:05:16,849 | INFO     | aborting loop
[2025-06-06 07:05:29] 2025-06-06 11:05:16,850 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 07:05:29] 2025-06-06 11:05:16,850 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 07:05:29] 2025-06-06 11:05:16,871 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 07:05:29] 2025-06-06 11:05:17,538 | INFO     | all data control threads have been joined
[2025-06-06 07:05:29] 2025-06-06 11:05:17,591 | INFO     | all payload control threads have been joined
[2025-06-06 07:05:29] 2025-06-06 11:05:17,800 | INFO     | all job control threads have been joined
[2025-06-06 07:05:29] 2025-06-06 11:05:17,854 | INFO     | [job] retrieve thread has finished
[2025-06-06 07:05:29] 2025-06-06 11:05:17,855 | INFO     | [job] job monitor thread has finished
[2025-06-06 07:05:29] 2025-06-06 11:05:18,015 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 07:05:29] 2025-06-06 11:05:18,015 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 07:05:29] 2025-06-06 11:05:18,275 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 07:05:29] 2025-06-06 11:05:18,384 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 07:05:29] 2025-06-06 11:05:18,409 | INFO     | [job] validate thread has finished
[2025-06-06 07:05:29] 2025-06-06 11:05:18,543 | INFO     | [data] control thread has finished
[2025-06-06 07:05:29] 2025-06-06 11:05:18,596 | INFO     | [payload] control thread has finished
[2025-06-06 07:05:29] 2025-06-06 11:05:18,617 | INFO     | [payload] failed_post thread has finished
[2025-06-06 07:05:29] 2025-06-06 11:05:18,773 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 07:05:29] 2025-06-06 11:05:18,777 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 07:05:29] 2025-06-06 11:05:18,805 | INFO     | [job] control thread has finished
[2025-06-06 07:05:29] 2025-06-06 11:05:18,877 | INFO     | [data] copytool_out thread has finished
[2025-06-06 07:05:29] 2025-06-06 11:05:19,055 | INFO     | [data] copytool_in thread has finished
[2025-06-06 07:05:29] 2025-06-06 11:05:19,082 | INFO     | [payload] validate_post thread has finished
[2025-06-06 07:05:29] 2025-06-06 11:05:19,280 | INFO     | [job] queue monitor thread has finished
[2025-06-06 07:05:29] 2025-06-06 11:05:22,782 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 07:05:29] 2025-06-06 11:05:23,978 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140022357382976)>', '<ExcThread(monitor, started 140021872965376)>']
[2025-06-06 07:05:29] 2025-06-06 11:05:24,895 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 07:05:29] 2025-06-06 11:05:24,895 | INFO     | [monitor] control thread has ended
[2025-06-06 07:05:29] 2025-06-06 11:05:29,004 | INFO     | all workflow threads have been joined
[2025-06-06 07:05:29] 2025-06-06 11:05:29,004 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 07:05:29] 2025-06-06 11:05:29,004 | INFO     | traces error code: 0
[2025-06-06 07:05:29] 2025-06-06 11:05:29,005 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 07:05:29] 2025-06-06 11:05:29,246 [wrapper] ==== pilot stdout END ====
[2025-06-06 07:05:29] 2025-06-06 11:05:29,249 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 07:05:29] 2025-06-06 11:05:29,253 [wrapper] pilotpid: 1927752
[2025-06-06 07:05:29] 2025-06-06 11:05:29,256 [wrapper] Pilot exit status: 0
[2025-06-06 07:05:29] 2025-06-06 11:05:29,274 [wrapper] pandaids: 6668980572
[2025-06-06 07:05:29] 2025-06-06 11:05:29,364 [wrapper] cleanup supervisor_pilot 3453831 1927753
[2025-06-06 07:05:29] 2025-06-06 11:05:29,367 [wrapper] Test setup, not cleaning
[2025-06-06 07:05:29] 2025-06-06 11:05:29,370 [wrapper] apfmon messages muted
[2025-06-06 07:05:29] 2025-06-06 11:05:29,373 [wrapper] ==== wrapper stdout END ====
[2025-06-06 07:05:29] 2025-06-06 11:05:29,376 [wrapper] ==== wrapper stderr END ====
[2025-06-06 07:05:29]  *** Error codes and diagnostics ***
[2025-06-06 07:05:29]     "exeErrorCode": 0,
[2025-06-06 07:05:29]     "exeErrorDiag": "",
[2025-06-06 07:05:29]     "pilotErrorCode": 0,
[2025-06-06 07:05:29]     "pilotErrorDiag": "",
[2025-06-06 07:05:29]  *** Listing of results directory ***
[2025-06-06 07:05:29] total 427584
[2025-06-06 07:05:29] -rw-r--r--. 1 boincer umatlas    495897 May 28 18:21 pilot3.tar.gz
[2025-06-06 07:05:29] -rwx------. 1 boincer umatlas     37140 May 28 18:27 runpilot2-wrapper.sh
[2025-06-06 07:05:29] -rw-r--r--. 1 boincer umatlas      5111 May 28 18:27 queuedata.json
[2025-06-06 07:05:29] -rw-r--r--. 1 boincer umatlas       100 Jun  6 01:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 07:05:29] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  6 01:22 run_atlas
[2025-06-06 07:05:29] -rw-r--r--. 1 boincer umatlas       105 Jun  6 01:22 job.xml
[2025-06-06 07:05:29] -rw-r--r--. 2 boincer umatlas 225802790 Jun  6 01:22 EVNT.44871834._003554.pool.root.1
[2025-06-06 07:05:29] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 01:22 start_atlas.sh
[2025-06-06 07:05:29] drwxrwx--x. 2 boincer umatlas        68 Jun  6 01:22 shared
[2025-06-06 07:05:29] -rw-r--r--. 2 boincer umatlas    508878 Jun  6 01:22 input.tar.gz
[2025-06-06 07:05:29] -rw-r--r--. 1 boincer umatlas         0 Jun  6 01:22 boinc_lockfile
[2025-06-06 07:05:29] -rw-r--r--. 1 boincer umatlas      2559 Jun  6 01:22 pandaJob.out
[2025-06-06 07:05:29] -rw-------. 1 boincer umatlas    988109 Jun  6 01:22 agis_schedconf.cvmfs.json
[2025-06-06 07:05:29] drwx------. 4 boincer umatlas      4096 Jun  6 01:22 pilot3
[2025-06-06 07:05:29] -rw-r--r--. 1 boincer umatlas      6546 Jun  6 07:02 init_data.xml
[2025-06-06 07:05:29] -rw-------. 1 boincer umatlas 203520759 Jun  6 07:04 HITS.44871837._091391.pool.root.1
[2025-06-06 07:05:29] -rw-r--r--. 1 boincer umatlas       531 Jun  6 07:04 boinc_task_state.xml
[2025-06-06 07:05:29] -rw-------. 1 boincer umatlas        95 Jun  6 07:04 pilot_heartbeat.json
[2025-06-06 07:05:29] -rw-------. 1 boincer umatlas      1053 Jun  6 07:04 memory_monitor_summary.json
[2025-06-06 07:05:29] -rw-------. 1 boincer umatlas   1598969 Jun  6 07:05 agis_ddmendpoints.agis.ALL.json
[2025-06-06 07:05:29] -rw-------. 1 boincer umatlas    498418 Jun  6 07:05 log.44871837._091391.job.log.tgz.1
[2025-06-06 07:05:29] -rw-------. 1 boincer umatlas      7727 Jun  6 07:05 heartbeat.json
[2025-06-06 07:05:29] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 07:05 boinc_mmap_file
[2025-06-06 07:05:29] -rw-r--r--. 1 boincer umatlas        29 Jun  6 07:05 wrapper_checkpoint.txt
[2025-06-06 07:05:29] -rw-------. 1 boincer umatlas      4489 Jun  6 07:05 pilotlog.txt
[2025-06-06 07:05:29] -rw-------. 1 boincer umatlas   1849637 Jun  6 07:05 log.44871837._091391.job.log.1
[2025-06-06 07:05:29] -rw-------. 1 boincer umatlas       357 Jun  6 07:05 output.list
[2025-06-06 07:05:29] -rw-r--r--. 1 boincer umatlas       620 Jun  6 07:05 runtime_log
[2025-06-06 07:05:29] -rw-------. 1 boincer umatlas   2365440 Jun  6 07:05 result.tar.gz
[2025-06-06 07:05:29] -rw-------. 1 boincer umatlas       659 Jun  6 07:05 x8RMDmLQee7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmwDdKDmnI5SSm.diag
[2025-06-06 07:05:29] -rw-r--r--. 1 boincer umatlas      8811 Jun  6 07:05 runtime_log.err
[2025-06-06 07:05:29] -rw-r--r--. 1 boincer umatlas     21309 Jun  6 07:05 stderr.txt
[2025-06-06 07:05:29] HITS file was successfully produced:
[2025-06-06 07:05:29] -rw-------. 1 boincer umatlas 203520759 Jun  6 07:04 shared/HITS.pool.root.1
[2025-06-06 07:05:29]  *** Contents of shared directory: ***
[2025-06-06 07:05:29] total 422096
[2025-06-06 07:05:29] -rw-r--r--. 2 boincer umatlas 225802790 Jun  6 01:22 ATLAS.root_0
[2025-06-06 07:05:29] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 01:22 start_atlas.sh
[2025-06-06 07:05:29] -rw-r--r--. 2 boincer umatlas    508878 Jun  6 01:22 input.tar.gz
[2025-06-06 07:05:29] -rw-------. 1 boincer umatlas 203520759 Jun  6 07:04 HITS.pool.root.1
[2025-06-06 07:05:29] -rw-------. 1 boincer umatlas   2365440 Jun  6 07:05 result.tar.gz
07:05:30 (1920916): run_atlas exited; CPU time 101283.917209
07:05:30 (1920916): called boinc_finish(0)

</stderr_txt>
]]>

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