Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:19:57 (29598): wrapper (7.7.26015): starting
01:19:57 (29598): wrapper: running run_atlas (--nthreads 8)
[2025-06-06 01:19:57] Arguments: --nthreads 8
[2025-06-06 01:19:57] Threads: 8
[2025-06-06 01:19:57] Checking for CVMFS
[2025-06-06 01:19:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 01:19:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 01:19:57] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 01:19:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 01:19:57] 2.11.2.0 2791 9293 84452 146844 3 1 14350638 20275200 1 130560 0 3173348 99.985 1512621 45679 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-06 01:19:57] CVMFS is ok
[2025-06-06 01:19:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 01:19:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 01:19:57] Further information can be found at the LHC@home message board.
[2025-06-06 01:19:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 01:19:57] Checking for apptainer binary...
[2025-06-06 01:19:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 01:19:57] Running /usr/bin/apptainer --version
[2025-06-06 01:19:57] apptainer version 1.3.2-1.el7
[2025-06-06 01:19:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 01:19:59] c-204-3.aglt2.org
[2025-06-06 01:19:59] apptainer works
[2025-06-06 01:19:59] Set ATHENA_PROC_NUMBER=8
[2025-06-06 01:19:59] Set ATHENA_CORE_NUMBER=8
[2025-06-06 01:19:59] Starting ATLAS job with PandaID=6681695376
[2025-06-06 01:19:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 03:06:56]  *** The last 200 lines of the pilot log: ***
[2025-06-06 03:06:56] 2025-06-06 07:06:20,183 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 03:06:56] 2025-06-06 07:06:22,686 | INFO     | monitor loop #472: job 0:6681695376 is in state 'finished'
[2025-06-06 03:06:56] 2025-06-06 07:06:22,686 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 03:06:56] 2025-06-06 07:06:24,111 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-06 03:06:56] 2025-06-06 07:06:24,114 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-06-06 03:06:56] 2025-06-06 07:06:24,116 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6681695376/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 03:06:56] 2025-06-06 07:06:24,117 | INFO     | extracted standard info from prmon json
[2025-06-06 03:06:56] 2025-06-06 07:06:24,117 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 03:06:56] 2025-06-06 07:06:24,117 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 03:06:56] 2025-06-06 07:06:24,118 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 03:06:56] 2025-06-06 07:06:24,118 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 03:06:56] 2025-06-06 07:06:24,120 | INFO     | fitting pss+swap vs Time
[2025-06-06 03:06:56] 2025-06-06 07:06:24,121 | INFO     | sum of square deviations: 348769330.0
[2025-06-06 03:06:56] 2025-06-06 07:06:24,121 | INFO     | sum of deviations: -2292754875.4999995
[2025-06-06 03:06:56] 2025-06-06 07:06:24,121 | INFO     | mean x: 1749190392.5
[2025-06-06 03:06:56] 2025-06-06 07:06:24,121 | INFO     | mean y: 2572376.0865384615
[2025-06-06 03:06:56] 2025-06-06 07:06:24,122 | INFO     | -- intersect: 11501475678.685228
[2025-06-06 03:06:56] 2025-06-06 07:06:24,122 | INFO     | intersect: 11501475678.685228
[2025-06-06 03:06:56] 2025-06-06 07:06:24,122 | INFO     | chi2: 1.698054075680045
[2025-06-06 03:06:56] 2025-06-06 07:06:24,122 | INFO     | sum of square deviations: 300842850.0
[2025-06-06 03:06:56] 2025-06-06 07:06:24,123 | INFO     | sum of deviations: -1365377091.0000002
[2025-06-06 03:06:56] 2025-06-06 07:06:24,123 | INFO     | mean x: 1749190240.0
[2025-06-06 03:06:56] 2025-06-06 07:06:24,123 | INFO     | mean y: 2575329.262626263
[2025-06-06 03:06:56] 2025-06-06 07:06:24,123 | INFO     | -- intersect: 7941285793.868291
[2025-06-06 03:06:56] 2025-06-06 07:06:24,123 | INFO     | intersect: 7941285793.868291
[2025-06-06 03:06:56] 2025-06-06 07:06:24,123 | INFO     | chi2: 1.7012568765554827
[2025-06-06 03:06:56] 2025-06-06 07:06:24,124 | INFO     | current chi2=1.7012568765554827 (change=-0.18861595289036945 %)
[2025-06-06 03:06:56] 2025-06-06 07:06:24,124 | INFO     | right removable region: 98
[2025-06-06 03:06:56] 2025-06-06 07:06:24,124 | INFO     | sum of square deviations: 300842850.0
[2025-06-06 03:06:56] 2025-06-06 07:06:24,124 | INFO     | sum of deviations: -18880502230.0
[2025-06-06 03:06:56] 2025-06-06 07:06:24,125 | INFO     | mean x: 1749190545.0
[2025-06-06 03:06:56] 2025-06-06 07:06:24,125 | INFO     | mean y: 2624044.1919191917
[2025-06-06 03:06:56] 2025-06-06 07:06:24,125 | INFO     | -- intersect: 109779525790.6267
[2025-06-06 03:06:56] 2025-06-06 07:06:24,125 | INFO     | intersect: 109779525790.6267
[2025-06-06 03:06:56] 2025-06-06 07:06:24,125 | INFO     | chi2: 0.10490342390731136
[2025-06-06 03:06:56] 2025-06-06 07:06:24,125 | INFO     | current chi2=0.10490342390731136 (change=93.82213879936072 %)
[2025-06-06 03:06:56] 2025-06-06 07:06:24,125 | INFO     | sum of square deviations: 257521107.5
[2025-06-06 03:06:56] 2025-06-06 07:06:24,126 | INFO     | sum of deviations: -17955163065.5
[2025-06-06 03:06:56] 2025-06-06 07:06:24,126 | INFO     | mean x: 1749190697.5
[2025-06-06 03:06:56] 2025-06-06 07:06:24,126 | INFO     | mean y: 2620629.010638298
[2025-06-06 03:06:56] 2025-06-06 07:06:24,126 | INFO     | -- intersect: 121961571921.06418
[2025-06-06 03:06:56] 2025-06-06 07:06:24,126 | INFO     | intersect: 121961571921.06418
[2025-06-06 03:06:56] 2025-06-06 07:06:24,127 | INFO     | chi2: 0.08366903329457023
[2025-06-06 03:06:56] 2025-06-06 07:06:24,127 | INFO     | current chi2=0.08366903329457023 (change=20.24184704543392 %)
[2025-06-06 03:06:56] 2025-06-06 07:06:24,127 | INFO     | left removable region: 20
[2025-06-06 03:06:56] 2025-06-06 07:06:24,127 | INFO     | sum of square deviations: 147126479.5
[2025-06-06 03:06:56] 2025-06-06 07:06:24,127 | INFO     | sum of deviations: -11753186681.499998
[2025-06-06 03:06:56] 2025-06-06 07:06:24,128 | INFO     | mean x: 1749190819.5
[2025-06-06 03:06:56] 2025-06-06 07:06:24,128 | INFO     | mean y: 2607030.705128205
[2025-06-06 03:06:56] 2025-06-06 07:06:24,128 | INFO     | -- intersect: 139736571392.63678
[2025-06-06 03:06:56] 2025-06-06 07:06:24,128 | INFO     | intersect: 139736571392.63678
[2025-06-06 03:06:56] 2025-06-06 07:06:24,128 | INFO     | chi2: 0.07528259619358932
[2025-06-06 03:06:56] 2025-06-06 07:06:24,128 | INFO     | -- intersect: 139736571392.63678
[2025-06-06 03:06:56] 2025-06-06 07:06:24,129 | INFO     | current memory leak: -79.88 B/s (using 78 data points, chi2=0.08)
[2025-06-06 03:06:56] 2025-06-06 07:06:24,129 | INFO     | could have reported an average CPU frequency of 1945 MHz (7 samples)
[2025-06-06 03:06:56] 2025-06-06 07:06:24,129 | INFO     | ..............................
[2025-06-06 03:06:56] 2025-06-06 07:06:24,129 | INFO     | . Timing measurements:
[2025-06-06 03:06:56] 2025-06-06 07:06:24,129 | INFO     | . get job = 0 s
[2025-06-06 03:06:56] 2025-06-06 07:06:24,129 | INFO     | . initial setup = 2 s
[2025-06-06 03:06:56] 2025-06-06 07:06:24,129 | INFO     | . payload setup = 12 s
[2025-06-06 03:06:56] 2025-06-06 07:06:24,130 | INFO     | . stage-in = 0 s
[2025-06-06 03:06:56] 2025-06-06 07:06:24,130 | INFO     | . payload execution = 6325 s
[2025-06-06 03:06:56] 2025-06-06 07:06:24,130 | INFO     | . stage-out = 1 s
[2025-06-06 03:06:56] 2025-06-06 07:06:24,130 | INFO     | . log creation = 0 s
[2025-06-06 03:06:56] 2025-06-06 07:06:24,130 | INFO     | ..............................
[2025-06-06 03:06:56] 2025-06-06 07:06:24,235 | INFO     | 
[2025-06-06 03:06:56] 2025-06-06 07:06:24,235 | INFO     | job summary report
[2025-06-06 03:06:56] 2025-06-06 07:06:24,236 | INFO     | --------------------------------------------------
[2025-06-06 03:06:56] 2025-06-06 07:06:24,236 | INFO     | PanDA job id: 6681695376
[2025-06-06 03:06:56] 2025-06-06 07:06:24,236 | INFO     | task id: 45006595
[2025-06-06 03:06:56] 2025-06-06 07:06:24,236 | INFO     | errors: (none)
[2025-06-06 03:06:56] 2025-06-06 07:06:24,236 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 03:06:56] 2025-06-06 07:06:24,237 | INFO     | pilot state: finished 
[2025-06-06 03:06:56] 2025-06-06 07:06:24,237 | INFO     | transexitcode: 0
[2025-06-06 03:06:56] 2025-06-06 07:06:24,237 | INFO     | exeerrorcode: 0
[2025-06-06 03:06:56] 2025-06-06 07:06:24,237 | INFO     | exeerrordiag: 
[2025-06-06 03:06:56] 2025-06-06 07:06:24,237 | INFO     | exitcode: 0
[2025-06-06 03:06:56] 2025-06-06 07:06:24,238 | INFO     | exitmsg: OK
[2025-06-06 03:06:56] 2025-06-06 07:06:24,238 | INFO     | cpuconsumptiontime: 46984 s
[2025-06-06 03:06:56] 2025-06-06 07:06:24,238 | INFO     | nevents: 400
[2025-06-06 03:06:56] 2025-06-06 07:06:24,238 | INFO     | neventsw: 0
[2025-06-06 03:06:56] 2025-06-06 07:06:24,238 | INFO     | pid: 8349
[2025-06-06 03:06:56] 2025-06-06 07:06:24,238 | INFO     | pgrp: 8349
[2025-06-06 03:06:56] 2025-06-06 07:06:24,239 | INFO     | corecount: 8
[2025-06-06 03:06:56] 2025-06-06 07:06:24,239 | INFO     | event service: False
[2025-06-06 03:06:56] 2025-06-06 07:06:24,239 | INFO     | sizes: {0: 2397409, 1: 2397608, 7: 2397870, 11: 2397898, 6341: 2424861, 6342: 2424860, 6343: 2433985, 6345: 2434041, 6350: 2434235}
[2025-06-06 03:06:56] 2025-06-06 07:06:24,239 | INFO     | --------------------------------------------------
[2025-06-06 03:06:56] 2025-06-06 07:06:24,239 | INFO     | 
[2025-06-06 03:06:56] 2025-06-06 07:06:24,240 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 03:06:56] 2025-06-06 07:06:24,267 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 03:06:56] 2025-06-06 07:06:24,268 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 03:06:56] 2025-06-06 07:06:24,268 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 03:06:56] 2025-06-06 07:06:24,268 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 03:06:56] 2025-06-06 07:06:24,269 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 03:06:56] 2025-06-06 07:06:24,269 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 03:06:56] 2025-06-06 07:06:24,269 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 03:06:56] 2025-06-06 07:06:24,269 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 03:06:56] 2025-06-06 07:06:24,270 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 03:06:56] 2025-06-06 07:06:24,270 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 03:06:56] 2025-06-06 07:06:24,270 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 03:06:56] 2025-06-06 07:06:24,270 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 03:06:56] 2025-06-06 07:06:24,270 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 03:06:56] 2025-06-06 07:06:24,271 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 03:06:56] 2025-06-06 07:06:24,271 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 03:06:56] 2025-06-06 07:06:24,271 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 03:06:56] 2025-06-06 07:06:24,271 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 03:06:56] 2025-06-06 07:06:24,272 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 03:06:56] 2025-06-06 07:06:24,272 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 03:06:56] 2025-06-06 07:06:24,272 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 03:06:56] 2025-06-06 07:06:24,272 | INFO     | job 6681695376 has completed (purged errors)
[2025-06-06 03:06:56] 2025-06-06 07:06:24,273 | INFO     | overall cleanup function is called
[2025-06-06 03:06:56] 2025-06-06 07:06:25,281 | INFO     | --- collectZombieJob: --- 10, [8349]
[2025-06-06 03:06:56] 2025-06-06 07:06:25,281 | INFO     | zombie collector waiting for pid 8349
[2025-06-06 03:06:56] 2025-06-06 07:06:25,289 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 03:06:56] 2025-06-06 07:06:25,289 | INFO     | collected zombie processes
[2025-06-06 03:06:56] 2025-06-06 07:06:25,289 | INFO     | will attempt to kill all subprocesses of pid=8349
[2025-06-06 03:06:56] 2025-06-06 07:06:25,380 | INFO     | process IDs to be killed: [8349] (in reverse order)
[2025-06-06 03:06:56] 2025-06-06 07:06:25,436 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 03:06:56] 2025-06-06 07:06:25,437 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 03:06:56] 2025-06-06 07:06:25,440 | INFO     | did not find any defunct processes belonging to 8349
[2025-06-06 03:06:56] 2025-06-06 07:06:25,442 | INFO     | did not find any defunct processes belonging to 8349
[2025-06-06 03:06:56] 2025-06-06 07:06:25,443 | INFO     | ready for new job
[2025-06-06 03:06:56] 2025-06-06 07:06:25,443 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 03:06:56] 2025-06-06 07:06:25,444 | INFO     | ***************************************
[2025-06-06 03:06:56] 2025-06-06 07:06:25,445 | INFO     | ***  PanDA Pilot version 3.10.3.82  ***
[2025-06-06 03:06:56] 2025-06-06 07:06:25,445 | INFO     | ***************************************
[2025-06-06 03:06:56] 2025-06-06 07:06:25,445 | INFO     | 
[2025-06-06 03:06:56] 2025-06-06 07:06:25,445 | INFO     | architecture information:
[2025-06-06 03:06:56] 2025-06-06 07:06:25,446 | INFO     | executing command: cat /etc/os-release
[2025-06-06 03:06:56] 2025-06-06 07:06:25,462 | INFO     | cat /etc/os-release:
[2025-06-06 03:06:56] NAME="CentOS Linux"
[2025-06-06 03:06:56] VERSION="7 (Core)"
[2025-06-06 03:06:56] ID="centos"
[2025-06-06 03:06:56] ID_LIKE="rhel fedora"
[2025-06-06 03:06:56] VERSION_ID="7"
[2025-06-06 03:06:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 03:06:56] ANSI_COLOR="0;31"
[2025-06-06 03:06:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 03:06:56] HOME_URL="https://www.centos.org/"
[2025-06-06 03:06:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 03:06:56] 
[2025-06-06 03:06:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 03:06:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 03:06:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 03:06:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 03:06:56] 
[2025-06-06 03:06:56] 2025-06-06 07:06:25,462 | INFO     | ***************************************
[2025-06-06 03:06:56] 2025-06-06 07:06:25,964 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 03:06:56] 2025-06-06 07:06:25,983 | INFO     | sufficient remaining disk space (18652069888 B)
[2025-06-06 03:06:56] 2025-06-06 07:06:25,983 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 03:06:56] 2025-06-06 07:06:25,983 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 03:06:56] 2025-06-06 07:06:25,984 | INFO     | update_server=False
[2025-06-06 03:06:56] 2025-06-06 07:06:25,984 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 03:06:56] 2025-06-06 07:06:25,984 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 03:06:56] 2025-06-06 07:06:25,985 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 03:06:56] 2025-06-06 07:06:26,195 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 03:06:56] 2025-06-06 07:06:26,195 | INFO     | aborting loop
[2025-06-06 03:06:56] 2025-06-06 07:06:26,760 | INFO     | all data control threads have been joined
[2025-06-06 03:06:56] 2025-06-06 07:06:26,989 | INFO     | [job] retrieve thread has finished
[2025-06-06 03:06:56] 2025-06-06 07:06:26,990 | INFO     | [job] queue monitor thread has finished
[2025-06-06 03:06:56] 2025-06-06 07:06:27,201 | INFO     | [job] job monitor thread has finished
[2025-06-06 03:06:56] 2025-06-06 07:06:27,231 | INFO     | [payload] failed_post thread has finished
[2025-06-06 03:06:56] 2025-06-06 07:06:27,340 | INFO     | all payload control threads have been joined
[2025-06-06 03:06:56] 2025-06-06 07:06:27,413 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 03:06:56] 2025-06-06 07:06:27,437 | INFO     | [data] copytool_in thread has finished
[2025-06-06 03:06:56] 2025-06-06 07:06:27,437 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 03:06:56] 2025-06-06 07:06:27,480 | INFO     | all job control threads have been joined
[2025-06-06 03:06:56] 2025-06-06 07:06:27,766 | INFO     | [data] control thread has finished
[2025-06-06 03:06:56] 2025-06-06 07:06:27,989 | INFO     | [data] copytool_out thread has finished
[2025-06-06 03:06:56] 2025-06-06 07:06:28,146 | INFO     | [payload] validate_post thread has finished
[2025-06-06 03:06:56] 2025-06-06 07:06:28,345 | INFO     | [payload] control thread has finished
[2025-06-06 03:06:56] 2025-06-06 07:06:28,353 | INFO     | [job] validate thread has finished
[2025-06-06 03:06:56] 2025-06-06 07:06:28,406 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 03:06:56] 2025-06-06 07:06:28,485 | INFO     | [job] control thread has finished
[2025-06-06 03:06:56] 2025-06-06 07:06:29,038 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 03:06:56] 2025-06-06 07:06:33,044 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 03:06:56] 2025-06-06 07:06:36,750 | INFO     | job.realtimelogging is not enabled
[2025-06-06 03:06:56] 2025-06-06 07:06:37,755 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 03:06:56] 2025-06-06 07:06:39,843 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140434326308672)>', '<ExcThread(monitor, started 140433711671040)>']
[2025-06-06 03:06:56] 2025-06-06 07:06:44,852 | INFO     | all workflow threads have been joined
[2025-06-06 03:06:56] 2025-06-06 07:06:44,853 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 03:06:56] 2025-06-06 07:06:44,859 | INFO     | traces error code: 0
[2025-06-06 03:06:56] 2025-06-06 07:06:44,860 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 03:06:56] 2025-06-06 07:06:56,486 | INFO     | PID=1717 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-06 03:06:56] 2025-06-06 07:06:56,487 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 03:06:56] 2025-06-06 07:06:56,487 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 03:06:56] 2025-06-06 07:06:56,487 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 03:06:56] 2025-06-06 07:06:56,487 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 03:06:56] 2025-06-06 07:06:56,488 | CRITICAL | thread 'MainThread' is not alive
[2025-06-06 03:06:56] 2025-06-06 07:06:56,488 | INFO     | [monitor] control thread has ended
[2025-06-06 03:06:56] 2025-06-06 07:06:56,611 [wrapper] ==== pilot stdout END ====
[2025-06-06 03:06:56] 2025-06-06 07:06:56,616 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 03:06:56] 2025-06-06 07:06:56,621 [wrapper] pilotpid: 1717
[2025-06-06 03:06:56] 2025-06-06 07:06:56,626 [wrapper] Pilot exit status: 0
[2025-06-06 03:06:56] 2025-06-06 07:06:56,643 [wrapper] pandaids: 6681695376
[2025-06-06 03:06:56] 2025-06-06 07:06:56,689 [wrapper] cleanup supervisor_pilot 28155 1718
[2025-06-06 03:06:56] 2025-06-06 07:06:56,693 [wrapper] Test setup, not cleaning
[2025-06-06 03:06:56] 2025-06-06 07:06:56,699 [wrapper] apfmon messages muted
[2025-06-06 03:06:56] 2025-06-06 07:06:56,703 [wrapper] ==== wrapper stdout END ====
[2025-06-06 03:06:56] 2025-06-06 07:06:56,708 [wrapper] ==== wrapper stderr END ====
[2025-06-06 03:06:56]  *** Error codes and diagnostics ***
[2025-06-06 03:06:56]     "exeErrorCode": 0,
[2025-06-06 03:06:56]     "exeErrorDiag": "",
[2025-06-06 03:06:56]     "pilotErrorCode": 0,
[2025-06-06 03:06:56]     "pilotErrorDiag": "",
[2025-06-06 03:06:56]  *** Listing of results directory ***
[2025-06-06 03:06:56] total 382944
[2025-06-06 03:06:56] -rw-r--r-- 1 boincer umatlas    529402 Jun  6 01:07 pilot3.tar.gz
[2025-06-06 03:06:56] -rwx------ 1 boincer umatlas     37140 Jun  6 01:19 runpilot2-wrapper.sh
[2025-06-06 03:06:56] -rw-r--r-- 1 boincer umatlas      5112 Jun  6 01:19 queuedata.json
[2025-06-06 03:06:56] -rw-r--r-- 1 boincer umatlas       100 Jun  6 01:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 03:06:56] -rwxr-xr-x 1 boincer umatlas      7986 Jun  6 01:19 run_atlas
[2025-06-06 03:06:56] -rw-r--r-- 1 boincer umatlas       105 Jun  6 01:19 job.xml
[2025-06-06 03:06:56] -rw-r--r-- 2 boincer umatlas 213361980 Jun  6 01:19 EVNT.45006593._000847.pool.root.1
[2025-06-06 03:06:56] -rw-r--r-- 2 boincer umatlas     15095 Jun  6 01:19 start_atlas.sh
[2025-06-06 03:06:56] drwxrwx--x 2 boincer umatlas      4096 Jun  6 01:19 shared
[2025-06-06 03:06:56] -rw-r--r-- 2 boincer umatlas    541914 Jun  6 01:19 input.tar.gz
[2025-06-06 03:06:56] -rw-r--r-- 1 boincer umatlas         0 Jun  6 01:19 boinc_lockfile
[2025-06-06 03:06:56] -rw-r--r-- 1 boincer umatlas      2523 Jun  6 01:19 pandaJob.out
[2025-06-06 03:06:56] -rw------- 1 boincer umatlas    988109 Jun  6 01:20 agis_schedconf.cvmfs.json
[2025-06-06 03:06:56] -rw------- 1 boincer umatlas   1598969 Jun  6 01:20 agis_ddmendpoints.agis.ALL.json
[2025-06-06 03:06:56] drwx------ 4 boincer umatlas      4096 Jun  6 01:20 pilot3
[2025-06-06 03:06:56] -rw-r--r-- 1 boincer umatlas      5824 Jun  6 03:03 init_data.xml
[2025-06-06 03:06:56] -rw------- 1 boincer umatlas 173047086 Jun  6 03:05 HITS.45006595._057129.pool.root.1
[2025-06-06 03:06:56] -rw-r--r-- 1 boincer umatlas       529 Jun  6 03:05 boinc_task_state.xml
[2025-06-06 03:06:56] -rw------- 1 boincer umatlas      1048 Jun  6 03:06 memory_monitor_summary.json
[2025-06-06 03:06:56] -rw------- 1 boincer umatlas    326514 Jun  6 03:06 log.45006595._057129.job.log.tgz.1
[2025-06-06 03:06:56] -rw------- 1 boincer umatlas      7778 Jun  6 03:06 heartbeat.json
[2025-06-06 03:06:56] -rw-r--r-- 1 boincer umatlas      8192 Jun  6 03:06 boinc_mmap_file
[2025-06-06 03:06:56] -rw-r--r-- 1 boincer umatlas        27 Jun  6 03:06 wrapper_checkpoint.txt
[2025-06-06 03:06:56] -rw------- 1 boincer umatlas        95 Jun  6 03:06 pilot_heartbeat.json
[2025-06-06 03:06:56] -rw------- 1 boincer umatlas       814 Jun  6 03:06 pilotlog.txt
[2025-06-06 03:06:56] -rw------- 1 boincer umatlas    588303 Jun  6 03:06 log.45006595._057129.job.log.1
[2025-06-06 03:06:56] -rw------- 1 boincer umatlas       357 Jun  6 03:06 output.list
[2025-06-06 03:06:56] -rw-r--r-- 1 boincer umatlas       620 Jun  6 03:06 runtime_log
[2025-06-06 03:06:56] -rw------- 1 boincer umatlas    931840 Jun  6 03:06 result.tar.gz
[2025-06-06 03:06:56] -rw-r--r-- 1 boincer umatlas      8655 Jun  6 03:06 runtime_log.err
[2025-06-06 03:06:56] -rw------- 1 boincer umatlas       658 Jun  6 03:06 EJcKDmKfeh7n9Rq4apOajLDm4fhM0noT9bVof3QYDmh5aKDmpDoIfn.diag
[2025-06-06 03:06:56] -rw-r--r-- 1 boincer umatlas     21102 Jun  6 03:06 stderr.txt
[2025-06-06 03:06:56] HITS file was successfully produced:
[2025-06-06 03:06:56] -rw------- 1 boincer umatlas 173047086 Jun  6 03:05 shared/HITS.pool.root.1
[2025-06-06 03:06:56]  *** Contents of shared directory: ***
[2025-06-06 03:06:56] total 378824
[2025-06-06 03:06:56] -rw-r--r-- 2 boincer umatlas 213361980 Jun  6 01:19 ATLAS.root_0
[2025-06-06 03:06:56] -rw-r--r-- 2 boincer umatlas     15095 Jun  6 01:19 start_atlas.sh
[2025-06-06 03:06:56] -rw-r--r-- 2 boincer umatlas    541914 Jun  6 01:19 input.tar.gz
[2025-06-06 03:06:56] -rw------- 1 boincer umatlas 173047086 Jun  6 03:05 HITS.pool.root.1
[2025-06-06 03:06:56] -rw------- 1 boincer umatlas    931840 Jun  6 03:06 result.tar.gz
03:06:58 (29598): run_atlas exited; CPU time 46950.795029
03:06:58 (29598): called boinc_finish(0)

</stderr_txt>
]]>

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