Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:18:31 (2397704): wrapper (7.7.26015): starting
01:18:31 (2397704): wrapper: running run_atlas (--nthreads 8)
[2025-06-06 01:18:31] Arguments: --nthreads 8
[2025-06-06 01:18:31] Threads: 8
[2025-06-06 01:18:31] Checking for CVMFS
[2025-06-06 01:18:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 01:18:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 01:18:31] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 01:18:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 01:18:32] 2.12.6.0 5013 39762 682760 146844 0 235 23184880 32935936 30175 16776704 1 559580629 99.688 438469449 36463 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-06 01:18:32] CVMFS is ok
[2025-06-06 01:18:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 01:18:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 01:18:32] Further information can be found at the LHC@home message board.
[2025-06-06 01:18:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 01:18:32] Checking for apptainer binary...
[2025-06-06 01:18:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 01:18:32] Running /usr/bin/apptainer --version
[2025-06-06 01:18:32] apptainer version 1.4.1-1.el9
[2025-06-06 01:18:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 01:18:32] c7-9-15.aglt2.org
[2025-06-06 01:18:32] apptainer works
[2025-06-06 01:18:32] Set ATHENA_PROC_NUMBER=8
[2025-06-06 01:18:32] Set ATHENA_CORE_NUMBER=8
[2025-06-06 01:18:32] Starting ATLAS job with PandaID=6669088837
[2025-06-06 01:18:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 02:18:40]  *** The last 200 lines of the pilot log: ***
[2025-06-06 02:18:40]  is_tar=False
[2025-06-06 02:18:40]  lfn=log.44871837._092765.job.log.tgz.1
[2025-06-06 02:18:40]  mtime=0
[2025-06-06 02:18:40]  protocol_id=None
[2025-06-06 02:18:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 02:18:40]  replicas=None
[2025-06-06 02:18:40]  scope=mc23_13p6TeV
[2025-06-06 02:18:40]  status=None
[2025-06-06 02:18:40]  status_code=0
[2025-06-06 02:18:40]  storage_token=
[2025-06-06 02:18:40]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6669088837/log.44871837._092765.job.log.tgz.1
[2025-06-06 02:18:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dc/4f/log.44871837._092765.job.log.tgz.1
[2025-06-06 02:18:40]  workdir=None
[2025-06-06 02:18:40] ]
[2025-06-06 02:18:40] 2025-06-06 06:18:20,010 | INFO     | transferring file log.44871837._092765.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6669088837/log.44871837._092765.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-06 02:18:40] 2025-06-06 06:18:20,010 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6669088837/log.44871837._092765.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._092765.job
[2025-06-06 02:18:40] 2025-06-06 06:18:20,030 | INFO     | adding to output.list: log.44871837._092765.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dc/4f/log.44871837._092765.job.log.tg
[2025-06-06 02:18:40] 2025-06-06 06:18:20,030 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 02:18:40] 2025-06-06 06:18:20,030 | INFO     | summary of transferred files:
[2025-06-06 02:18:40] 2025-06-06 06:18:20,030 | INFO     |  -- lfn=log.44871837._092765.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 02:18:40] 2025-06-06 06:18:20,030 | INFO     | stage-out finished correctly
[2025-06-06 02:18:40] 2025-06-06 06:18:20,080 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 02:18:40] 2025-06-06 06:18:20,234 | INFO     | monitor loop #265: job 0:6669088837 is in state 'finished'
[2025-06-06 02:18:40] 2025-06-06 06:18:20,234 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 02:18:40] 2025-06-06 06:18:21,484 | INFO     | job 6669088837 has state=finished
[2025-06-06 02:18:40] 2025-06-06 06:18:21,484 | INFO     | preparing for final server update for job 6669088837 in state='finished'
[2025-06-06 02:18:40] 2025-06-06 06:18:21,485 | INFO     | this job has now completed (state=finished)
[2025-06-06 02:18:40] 2025-06-06 06:18:21,485 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 02:18:40] 2025-06-06 06:18:21,485 | INFO     | log transfer has been attempted: DONE
[2025-06-06 02:18:40] 2025-06-06 06:18:21,485 | INFO     | job 6669088837 has finished - writing final server update
[2025-06-06 02:18:40] 2025-06-06 06:18:21,485 | INFO     | total number of processed events: 400 (read)
[2025-06-06 02:18:40] 2025-06-06 06:18:21,504 | INFO     | executing command: lscpu
[2025-06-06 02:18:40] 2025-06-06 06:18:21,582 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 02:18:40] 2025-06-06 06:18:22,737 | INFO     | monitor loop #266: job 0:6669088837 is in state 'finished'
[2025-06-06 02:18:40] 2025-06-06 06:18:22,738 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 02:18:40] 2025-06-06 06:18:22,997 | INFO     | PID=2405919 has CPU usage=10.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-06 02:18:40] 2025-06-06 06:18:22,997 | INFO     | .. there are 39 such processes running
[2025-06-06 02:18:40] 2025-06-06 06:18:25,241 | INFO     | monitor loop #267: job 0:6669088837 is in state 'finished'
[2025-06-06 02:18:40] 2025-06-06 06:18:25,241 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 02:18:40] 2025-06-06 06:18:25,544 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-06 02:18:40] 2025-06-06 06:18:25,545 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6669088837/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 02:18:40] 2025-06-06 06:18:25,545 | INFO     | extracted standard info from prmon json
[2025-06-06 02:18:40] 2025-06-06 06:18:25,545 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 02:18:40] 2025-06-06 06:18:25,545 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 02:18:40] 2025-06-06 06:18:25,546 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 02:18:40] 2025-06-06 06:18:25,546 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 02:18:40] 2025-06-06 06:18:25,547 | INFO     | fitting pss+swap vs Time
[2025-06-06 02:18:40] 2025-06-06 06:18:25,547 | INFO     | sum of square deviations: 43584073.0
[2025-06-06 02:18:40] 2025-06-06 06:18:25,547 | INFO     | sum of deviations: -4686478415.0
[2025-06-06 02:18:40] 2025-06-06 06:18:25,547 | INFO     | mean x: 1749189005.5
[2025-06-06 02:18:40] 2025-06-06 06:18:25,547 | INFO     | mean y: 2575437.8846153845
[2025-06-06 02:18:40] 2025-06-06 06:18:25,548 | INFO     | -- intersect: 188088175377.8229
[2025-06-06 02:18:40] 2025-06-06 06:18:25,548 | INFO     | intersect: 188088175377.8229
[2025-06-06 02:18:40] 2025-06-06 06:18:25,548 | INFO     | chi2: 0.13867529737837753
[2025-06-06 02:18:40] 2025-06-06 06:18:25,548 | INFO     | -- intersect: 188088175377.8229
[2025-06-06 02:18:40] 2025-06-06 06:18:25,548 | INFO     | current memory leak: -107.53 B/s (using 52 data points, chi2=0.14)
[2025-06-06 02:18:40] 2025-06-06 06:18:25,548 | INFO     | ..............................
[2025-06-06 02:18:40] 2025-06-06 06:18:25,548 | INFO     | . Timing measurements:
[2025-06-06 02:18:40] 2025-06-06 06:18:25,548 | INFO     | . get job = 0 s
[2025-06-06 02:18:40] 2025-06-06 06:18:25,548 | INFO     | . initial setup = 2 s
[2025-06-06 02:18:40] 2025-06-06 06:18:25,548 | INFO     | . payload setup = 5 s
[2025-06-06 02:18:40] 2025-06-06 06:18:25,548 | INFO     | . stage-in = 0 s
[2025-06-06 02:18:40] 2025-06-06 06:18:25,548 | INFO     | . payload execution = 3553 s
[2025-06-06 02:18:40] 2025-06-06 06:18:25,548 | INFO     | . stage-out = 0 s
[2025-06-06 02:18:40] 2025-06-06 06:18:25,548 | INFO     | . log creation = 0 s
[2025-06-06 02:18:40] 2025-06-06 06:18:25,548 | INFO     | ..............................
[2025-06-06 02:18:40] 2025-06-06 06:18:25,743 | INFO     | 
[2025-06-06 02:18:40] 2025-06-06 06:18:25,743 | INFO     | job summary report
[2025-06-06 02:18:40] 2025-06-06 06:18:25,743 | INFO     | --------------------------------------------------
[2025-06-06 02:18:40] 2025-06-06 06:18:25,743 | INFO     | PanDA job id: 6669088837
[2025-06-06 02:18:40] 2025-06-06 06:18:25,743 | INFO     | task id: 44871837
[2025-06-06 02:18:40] 2025-06-06 06:18:25,743 | INFO     | errors: (none)
[2025-06-06 02:18:40] 2025-06-06 06:18:25,743 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 02:18:40] 2025-06-06 06:18:25,743 | INFO     | pilot state: finished 
[2025-06-06 02:18:40] 2025-06-06 06:18:25,743 | INFO     | transexitcode: 0
[2025-06-06 02:18:40] 2025-06-06 06:18:25,743 | INFO     | exeerrorcode: 0
[2025-06-06 02:18:40] 2025-06-06 06:18:25,743 | INFO     | exeerrordiag: 
[2025-06-06 02:18:40] 2025-06-06 06:18:25,743 | INFO     | exitcode: 0
[2025-06-06 02:18:40] 2025-06-06 06:18:25,743 | INFO     | exitmsg: OK
[2025-06-06 02:18:40] 2025-06-06 06:18:25,743 | INFO     | cpuconsumptiontime: 26442 s
[2025-06-06 02:18:40] 2025-06-06 06:18:25,743 | INFO     | nevents: 400
[2025-06-06 02:18:40] 2025-06-06 06:18:25,743 | INFO     | neventsw: 0
[2025-06-06 02:18:40] 2025-06-06 06:18:25,743 | INFO     | pid: 2429811
[2025-06-06 02:18:40] 2025-06-06 06:18:25,743 | INFO     | pgrp: 2429811
[2025-06-06 02:18:40] 2025-06-06 06:18:25,743 | INFO     | corecount: 8
[2025-06-06 02:18:40] 2025-06-06 06:18:25,743 | INFO     | event service: False
[2025-06-06 02:18:40] 2025-06-06 06:18:25,743 | INFO     | sizes: {0: 2396514, 1: 2397370, 4: 2397576, 11: 2397604, 3562: 2423297, 3564: 2432422, 3570: 2432536}
[2025-06-06 02:18:40] 2025-06-06 06:18:25,744 | INFO     | --------------------------------------------------
[2025-06-06 02:18:40] 2025-06-06 06:18:25,744 | INFO     | 
[2025-06-06 02:18:40] 2025-06-06 06:18:25,744 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 02:18:40] 2025-06-06 06:18:25,761 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 02:18:40] 2025-06-06 06:18:25,762 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 02:18:40] 2025-06-06 06:18:25,762 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 02:18:40] 2025-06-06 06:18:25,762 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 02:18:40] 2025-06-06 06:18:25,762 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 02:18:40] 2025-06-06 06:18:25,762 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 02:18:40] 2025-06-06 06:18:25,762 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 02:18:40] 2025-06-06 06:18:25,762 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 02:18:40] 2025-06-06 06:18:25,762 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 02:18:40] 2025-06-06 06:18:25,762 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 02:18:40] 2025-06-06 06:18:25,762 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 02:18:40] 2025-06-06 06:18:25,762 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 02:18:40] 2025-06-06 06:18:25,762 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 02:18:40] 2025-06-06 06:18:25,762 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 02:18:40] 2025-06-06 06:18:25,762 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 02:18:40] 2025-06-06 06:18:25,762 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 02:18:40] 2025-06-06 06:18:25,762 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 02:18:40] 2025-06-06 06:18:25,762 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 02:18:40] 2025-06-06 06:18:25,762 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 02:18:40] 2025-06-06 06:18:25,762 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 02:18:40] 2025-06-06 06:18:25,762 | INFO     | job 6669088837 has completed (purged errors)
[2025-06-06 02:18:40] 2025-06-06 06:18:25,763 | INFO     | overall cleanup function is called
[2025-06-06 02:18:40] 2025-06-06 06:18:26,771 | INFO     | --- collectZombieJob: --- 10, [2429811]
[2025-06-06 02:18:40] 2025-06-06 06:18:26,771 | INFO     | zombie collector waiting for pid 2429811
[2025-06-06 02:18:40] 2025-06-06 06:18:26,771 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 02:18:40] 2025-06-06 06:18:26,771 | INFO     | collected zombie processes
[2025-06-06 02:18:40] 2025-06-06 06:18:26,771 | INFO     | will attempt to kill all subprocesses of pid=2429811
[2025-06-06 02:18:40] 2025-06-06 06:18:27,082 | INFO     | process IDs to be killed: [2429811] (in reverse order)
[2025-06-06 02:18:40] 2025-06-06 06:18:27,192 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 02:18:40] 2025-06-06 06:18:27,193 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 02:18:40] 2025-06-06 06:18:27,211 | INFO     | did not find any defunct processes belonging to 2429811
[2025-06-06 02:18:40] 2025-06-06 06:18:27,229 | INFO     | did not find any defunct processes belonging to 2429811
[2025-06-06 02:18:40] 2025-06-06 06:18:27,230 | INFO     | ready for new job
[2025-06-06 02:18:40] 2025-06-06 06:18:27,230 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 02:18:40] 2025-06-06 06:18:27,231 | INFO     | **************************************
[2025-06-06 02:18:40] 2025-06-06 06:18:27,231 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 02:18:40] 2025-06-06 06:18:27,231 | INFO     | **************************************
[2025-06-06 02:18:40] 2025-06-06 06:18:27,231 | INFO     | 
[2025-06-06 02:18:40] 2025-06-06 06:18:27,236 | INFO     | architecture information:
[2025-06-06 02:18:40] 2025-06-06 06:18:27,236 | INFO     | executing command: cat /etc/os-release
[2025-06-06 02:18:40] 2025-06-06 06:18:27,249 | INFO     | cat /etc/os-release:
[2025-06-06 02:18:40] NAME="CentOS Linux"
[2025-06-06 02:18:40] VERSION="7 (Core)"
[2025-06-06 02:18:40] ID="centos"
[2025-06-06 02:18:40] ID_LIKE="rhel fedora"
[2025-06-06 02:18:40] VERSION_ID="7"
[2025-06-06 02:18:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 02:18:40] ANSI_COLOR="0;31"
[2025-06-06 02:18:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 02:18:40] HOME_URL="https://www.centos.org/"
[2025-06-06 02:18:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 02:18:40] 
[2025-06-06 02:18:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 02:18:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 02:18:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 02:18:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 02:18:40] 
[2025-06-06 02:18:40] 2025-06-06 06:18:27,249 | INFO     | **************************************
[2025-06-06 02:18:40] 2025-06-06 06:18:27,752 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 02:18:40] 2025-06-06 06:18:27,768 | INFO     | sufficient remaining disk space (76618399744 B)
[2025-06-06 02:18:40] 2025-06-06 06:18:27,769 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 02:18:40] 2025-06-06 06:18:27,769 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 02:18:40] 2025-06-06 06:18:27,769 | INFO     | update_server=False
[2025-06-06 02:18:40] 2025-06-06 06:18:27,769 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 02:18:40] 2025-06-06 06:18:27,769 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 02:18:40] 2025-06-06 06:18:27,770 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 02:18:40] 2025-06-06 06:18:27,770 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 02:18:40] 2025-06-06 06:18:27,770 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 02:18:40] 2025-06-06 06:18:28,073 | INFO     | all data control threads have been joined
[2025-06-06 02:18:40] 2025-06-06 06:18:28,098 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 02:18:40] 2025-06-06 06:18:28,436 | INFO     | all payload control threads have been joined
[2025-06-06 02:18:40] 2025-06-06 06:18:28,751 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 02:18:40] 2025-06-06 06:18:28,751 | INFO     | aborting loop
[2025-06-06 02:18:40] 2025-06-06 06:18:28,774 | INFO     | [job] retrieve thread has finished
[2025-06-06 02:18:40] 2025-06-06 06:18:29,078 | INFO     | [data] control thread has finished
[2025-06-06 02:18:40] 2025-06-06 06:18:29,085 | INFO     | all job control threads have been joined
[2025-06-06 02:18:40] 2025-06-06 06:18:29,130 | INFO     | [payload] failed_post thread has finished
[2025-06-06 02:18:40] 2025-06-06 06:18:29,220 | INFO     | [data] copytool_in thread has finished
[2025-06-06 02:18:40] 2025-06-06 06:18:29,330 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 02:18:40] 2025-06-06 06:18:29,441 | INFO     | [payload] control thread has finished
[2025-06-06 02:18:40] 2025-06-06 06:18:29,539 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 02:18:40] 2025-06-06 06:18:29,756 | INFO     | [job] job monitor thread has finished
[2025-06-06 02:18:40] 2025-06-06 06:18:29,764 | INFO     | [job] validate thread has finished
[2025-06-06 02:18:40] 2025-06-06 06:18:29,846 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 02:18:40] 2025-06-06 06:18:29,922 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 02:18:40] 2025-06-06 06:18:30,090 | INFO     | [job] control thread has finished
[2025-06-06 02:18:40] 2025-06-06 06:18:30,104 | INFO     | [data] copytool_out thread has finished
[2025-06-06 02:18:40] 2025-06-06 06:18:30,296 | INFO     | [payload] validate_post thread has finished
[2025-06-06 02:18:40] 2025-06-06 06:18:30,602 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 02:18:40] 2025-06-06 06:18:30,636 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 02:18:40] 2025-06-06 06:18:31,607 | INFO     | [job] queue monitor thread has finished
[2025-06-06 02:18:40] 2025-06-06 06:18:34,643 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 02:18:40] 2025-06-06 06:18:34,967 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140120239335232)>', '<ExcThread(monitor, started 140119482824448)>']
[2025-06-06 02:18:40] 2025-06-06 06:18:35,808 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 02:18:40] 2025-06-06 06:18:35,808 | INFO     | [monitor] control thread has ended
[2025-06-06 02:18:40] 2025-06-06 06:18:38,017 [wrapper] supervise_pilot (15 min periods counter: 5)
[2025-06-06 02:18:40] 2025-06-06 06:18:39,992 | INFO     | all workflow threads have been joined
[2025-06-06 02:18:40] 2025-06-06 06:18:39,992 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 02:18:40] 2025-06-06 06:18:39,993 | INFO     | traces error code: 0
[2025-06-06 02:18:40] 2025-06-06 06:18:39,993 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 02:18:40] 2025-06-06 06:18:40,091 [wrapper] ==== pilot stdout END ====
[2025-06-06 02:18:40] 2025-06-06 06:18:40,094 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 02:18:40] 2025-06-06 06:18:40,098 [wrapper] pilotpid: 2405919
[2025-06-06 02:18:40] 2025-06-06 06:18:40,100 [wrapper] Pilot exit status: 0
[2025-06-06 02:18:40] 2025-06-06 06:18:40,116 [wrapper] pandaids: 6669088837
[2025-06-06 02:18:40] 2025-06-06 06:18:40,212 [wrapper] cleanup supervisor_pilot 3409610 2405920
[2025-06-06 02:18:40] 2025-06-06 06:18:40,214 [wrapper] Test setup, not cleaning
[2025-06-06 02:18:40] 2025-06-06 06:18:40,216 [wrapper] apfmon messages muted
[2025-06-06 02:18:40] 2025-06-06 06:18:40,218 [wrapper] ==== wrapper stdout END ====
[2025-06-06 02:18:40] 2025-06-06 06:18:40,220 [wrapper] ==== wrapper stderr END ====
[2025-06-06 02:18:40]  *** Error codes and diagnostics ***
[2025-06-06 02:18:40]     "exeErrorCode": 0,
[2025-06-06 02:18:40]     "exeErrorDiag": "",
[2025-06-06 02:18:40]     "pilotErrorCode": 0,
[2025-06-06 02:18:40]     "pilotErrorDiag": "",
[2025-06-06 02:18:40]  *** Listing of results directory ***
[2025-06-06 02:18:40] total 411416
[2025-06-06 02:18:40] -rw-r--r--. 1 boincer umatlas    495897 May 28 20:49 pilot3.tar.gz
[2025-06-06 02:18:40] -rwx------. 1 boincer umatlas     37140 May 28 20:56 runpilot2-wrapper.sh
[2025-06-06 02:18:40] -rw-r--r--. 1 boincer umatlas      5111 May 28 20:56 queuedata.json
[2025-06-06 02:18:40] -rw-r--r--. 1 boincer umatlas       100 Jun  6 01:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 02:18:40] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  6 01:18 run_atlas
[2025-06-06 02:18:40] -rw-r--r--. 1 boincer umatlas       105 Jun  6 01:18 job.xml
[2025-06-06 02:18:40] -rw-r--r--. 2 boincer umatlas 224723493 Jun  6 01:18 EVNT.44871834._002162.pool.root.1
[2025-06-06 02:18:40] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 01:18 start_atlas.sh
[2025-06-06 02:18:40] drwxrwx--x. 2 boincer umatlas      4096 Jun  6 01:18 shared
[2025-06-06 02:18:40] -rw-r--r--. 2 boincer umatlas    508882 Jun  6 01:18 input.tar.gz
[2025-06-06 02:18:40] -rw-r--r--. 1 boincer umatlas         0 Jun  6 01:18 boinc_lockfile
[2025-06-06 02:18:40] -rw-r--r--. 1 boincer umatlas      2559 Jun  6 01:18 pandaJob.out
[2025-06-06 02:18:40] -rw-------. 1 boincer umatlas    988109 Jun  6 01:18 agis_schedconf.cvmfs.json
[2025-06-06 02:18:40] -rw-------. 1 boincer umatlas   1598969 Jun  6 01:18 agis_ddmendpoints.agis.ALL.json
[2025-06-06 02:18:40] drwx------. 4 boincer umatlas      4096 Jun  6 01:18 pilot3
[2025-06-06 02:18:40] -rw-r--r--. 1 boincer umatlas      7159 Jun  6 02:12 init_data.xml
[2025-06-06 02:18:40] -rw-------. 1 boincer umatlas 191416931 Jun  6 02:17 HITS.44871837._092765.pool.root.1
[2025-06-06 02:18:40] -rw-------. 1 boincer umatlas        95 Jun  6 02:17 pilot_heartbeat.json
[2025-06-06 02:18:40] -rw-r--r--. 1 boincer umatlas       529 Jun  6 02:17 boinc_task_state.xml
[2025-06-06 02:18:40] -rw-------. 1 boincer umatlas      1038 Jun  6 02:18 memory_monitor_summary.json
[2025-06-06 02:18:40] -rw-------. 1 boincer umatlas    293970 Jun  6 02:18 log.44871837._092765.job.log.tgz.1
[2025-06-06 02:18:40] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 02:18 boinc_mmap_file
[2025-06-06 02:18:40] -rw-r--r--. 1 boincer umatlas        27 Jun  6 02:18 wrapper_checkpoint.txt
[2025-06-06 02:18:40] -rw-------. 1 boincer umatlas      7696 Jun  6 02:18 heartbeat.json
[2025-06-06 02:18:40] -rw-------. 1 boincer umatlas      4476 Jun  6 02:18 pilotlog.txt
[2025-06-06 02:18:40] -rw-------. 1 boincer umatlas    365826 Jun  6 02:18 log.44871837._092765.job.log.1
[2025-06-06 02:18:40] -rw-------. 1 boincer umatlas       357 Jun  6 02:18 output.list
[2025-06-06 02:18:40] -rw-r--r--. 1 boincer umatlas       620 Jun  6 02:18 runtime_log
[2025-06-06 02:18:40] -rw-------. 1 boincer umatlas    675840 Jun  6 02:18 result.tar.gz
[2025-06-06 02:18:40] -rw-r--r--. 1 boincer umatlas      8654 Jun  6 02:18 runtime_log.err
[2025-06-06 02:18:40] -rw-------. 1 boincer umatlas       651 Jun  6 02:18 H5oNDm0kge7n9Rq4apOajLDm4fhM0noT9bVof3QYDmKNUKDmKKrh5m.diag
[2025-06-06 02:18:40] -rw-r--r--. 1 boincer umatlas     21566 Jun  6 02:18 stderr.txt
[2025-06-06 02:18:40] HITS file was successfully produced:
[2025-06-06 02:18:40] -rw-------. 1 boincer umatlas 191416931 Jun  6 02:17 shared/HITS.pool.root.1
[2025-06-06 02:18:40]  *** Contents of shared directory: ***
[2025-06-06 02:18:40] total 407572
[2025-06-06 02:18:40] -rw-r--r--. 2 boincer umatlas 224723493 Jun  6 01:18 ATLAS.root_0
[2025-06-06 02:18:40] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 01:18 start_atlas.sh
[2025-06-06 02:18:40] -rw-r--r--. 2 boincer umatlas    508882 Jun  6 01:18 input.tar.gz
[2025-06-06 02:18:40] -rw-------. 1 boincer umatlas 191416931 Jun  6 02:17 HITS.pool.root.1
[2025-06-06 02:18:40] -rw-------. 1 boincer umatlas    675840 Jun  6 02:18 result.tar.gz
02:18:42 (2397704): run_atlas exited; CPU time 26505.903298
02:18:42 (2397704): called boinc_finish(0)

</stderr_txt>
]]>

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