Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
07:17:47 (1506130): wrapper (7.7.26015): starting
07:17:47 (1506130): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 07:17:47] Arguments: --nthreads 4
[2025-06-06 07:17:47] Threads: 4
[2025-06-06 07:17:47] Checking for CVMFS
[2025-06-06 07:17:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 07:17:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 07:17:47] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 07:17:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 07:17:48] 2.13.0.0 889978 812 48980 146844 3 8 7694281 10240000 1836 130560 1 1722312 98.547 2545368 153 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-06 07:17:48] CVMFS is ok
[2025-06-06 07:17:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 07:17:48] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-06 07:17:48] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-06 07:17:48] Further information can be found at the LHC@home message board.
[2025-06-06 07:17:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 07:17:48] Checking for apptainer binary...
[2025-06-06 07:17:48] apptainer is not installed, using version from CVMFS
[2025-06-06 07:17:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 07:17:48] Ryze
[2025-06-06 07:17:48] apptainer works
[2025-06-06 07:17:48] Set ATHENA_PROC_NUMBER=4
[2025-06-06 07:17:48] Set ATHENA_CORE_NUMBER=4
[2025-06-06 07:17:48] Starting ATLAS job with PandaID=6669239194
[2025-06-06 07:17:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 09:05:00]  *** The last 200 lines of the pilot log: ***
[2025-06-06 09:05:00] 2025-06-06 07:04:37,557 | INFO     | log transfer has been attempted: DONE
[2025-06-06 09:05:00] 2025-06-06 07:04:37,557 | INFO     | job 6669239194 has finished - writing final server update
[2025-06-06 09:05:00] 2025-06-06 07:04:37,557 | INFO     | total number of processed events: 400 (read)
[2025-06-06 09:05:00] 2025-06-06 07:04:37,559 | INFO     | executing command: lscpu
[2025-06-06 09:05:00] 2025-06-06 07:04:37,577 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 09:05:00] 2025-06-06 07:04:38,761 | INFO     | monitor loop #487: job 0:6669239194 is in state 'finished'
[2025-06-06 09:05:00] 2025-06-06 07:04:38,761 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 09:05:00] 2025-06-06 07:04:39,410 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 09:05:00] 2025-06-06 07:04:39,411 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6669239194/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 09:05:00] 2025-06-06 07:04:39,411 | INFO     | extracted standard info from prmon json
[2025-06-06 09:05:00] 2025-06-06 07:04:39,411 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 09:05:00] 2025-06-06 07:04:39,411 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 09:05:00] 2025-06-06 07:04:39,411 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 09:05:00] 2025-06-06 07:04:39,411 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 09:05:00] 2025-06-06 07:04:39,412 | INFO     | fitting pss+swap vs Time
[2025-06-06 09:05:00] 2025-06-06 07:04:39,412 | INFO     | sum of square deviations: 358927660.0
[2025-06-06 09:05:00] 2025-06-06 07:04:39,413 | INFO     | sum of deviations: -1393506387.000001
[2025-06-06 09:05:00] 2025-06-06 07:04:39,413 | INFO     | mean x: 1749190268.0
[2025-06-06 09:05:00] 2025-06-06 07:04:39,413 | INFO     | mean y: 2400400.8952380954
[2025-06-06 09:05:00] 2025-06-06 07:04:39,413 | INFO     | -- intersect: 6793484182.335329
[2025-06-06 09:05:00] 2025-06-06 07:04:39,413 | INFO     | intersect: 6793484182.335329
[2025-06-06 09:05:00] 2025-06-06 07:04:39,413 | INFO     | chi2: 1.426985368268785
[2025-06-06 09:05:00] 2025-06-06 07:04:39,413 | INFO     | sum of square deviations: 310052325.0
[2025-06-06 09:05:00] 2025-06-06 07:04:39,413 | INFO     | sum of deviations: -433882935.00000274
[2025-06-06 09:05:00] 2025-06-06 07:04:39,413 | INFO     | mean x: 1749190115.5
[2025-06-06 09:05:00] 2025-06-06 07:04:39,413 | INFO     | mean y: 2403400.48
[2025-06-06 09:05:00] 2025-06-06 07:04:39,413 | INFO     | -- intersect: 2450195853.531703
[2025-06-06 09:05:00] 2025-06-06 07:04:39,413 | INFO     | intersect: 2450195853.531703
[2025-06-06 09:05:00] 2025-06-06 07:04:39,413 | INFO     | chi2: 1.4297158915881625
[2025-06-06 09:05:00] 2025-06-06 07:04:39,413 | INFO     | current chi2=1.4297158915881625 (change=-0.19134907617799707 %)
[2025-06-06 09:05:00] 2025-06-06 07:04:39,413 | INFO     | right removable region: 99
[2025-06-06 09:05:00] 2025-06-06 07:04:39,414 | INFO     | sum of square deviations: 310052325.0
[2025-06-06 09:05:00] 2025-06-06 07:04:39,414 | INFO     | sum of deviations: -13577734989.499998
[2025-06-06 09:05:00] 2025-06-06 07:04:39,414 | INFO     | mean x: 1749190420.5
[2025-06-06 09:05:00] 2025-06-06 07:04:39,414 | INFO     | mean y: 2437260.83
[2025-06-06 09:05:00] 2025-06-06 07:04:39,414 | INFO     | -- intersect: 76602552985.55829
[2025-06-06 09:05:00] 2025-06-06 07:04:39,414 | INFO     | intersect: 76602552985.55829
[2025-06-06 09:05:00] 2025-06-06 07:04:39,414 | INFO     | chi2: 0.050633494383216994
[2025-06-06 09:05:00] 2025-06-06 07:04:39,414 | INFO     | current chi2=0.050633494383216994 (change=96.45171593843001 %)
[2025-06-06 09:05:00] 2025-06-06 07:04:39,414 | INFO     | sum of square deviations: 265828240.0
[2025-06-06 09:05:00] 2025-06-06 07:04:39,414 | INFO     | sum of deviations: -12557464087.0
[2025-06-06 09:05:00] 2025-06-06 07:04:39,414 | INFO     | mean x: 1749190573.0
[2025-06-06 09:05:00] 2025-06-06 07:04:39,414 | INFO     | mean y: 2433729.8842105265
[2025-06-06 09:05:00] 2025-06-06 07:04:39,414 | INFO     | -- intersect: 82632472591.69382
[2025-06-06 09:05:00] 2025-06-06 07:04:39,415 | INFO     | intersect: 82632472591.69382
[2025-06-06 09:05:00] 2025-06-06 07:04:39,415 | INFO     | chi2: 0.04702761839917269
[2025-06-06 09:05:00] 2025-06-06 07:04:39,415 | INFO     | current chi2=0.04702761839917269 (change=7.121523070782788 %)
[2025-06-06 09:05:00] 2025-06-06 07:04:39,415 | INFO     | left removable region: 20
[2025-06-06 09:05:00] 2025-06-06 07:04:39,415 | INFO     | sum of square deviations: 152858680.0
[2025-06-06 09:05:00] 2025-06-06 07:04:39,415 | INFO     | sum of deviations: -8845803736.000002
[2025-06-06 09:05:00] 2025-06-06 07:04:39,415 | INFO     | mean x: 1749190695.0
[2025-06-06 09:05:00] 2025-06-06 07:04:39,415 | INFO     | mean y: 2430331.734177215
[2025-06-06 09:05:00] 2025-06-06 07:04:39,415 | INFO     | -- intersect: 101226630258.1462
[2025-06-06 09:05:00] 2025-06-06 07:04:39,415 | INFO     | intersect: 101226630258.1462
[2025-06-06 09:05:00] 2025-06-06 07:04:39,415 | INFO     | chi2: 0.04015957494554643
[2025-06-06 09:05:00] 2025-06-06 07:04:39,415 | INFO     | -- intersect: 101226630258.1462
[2025-06-06 09:05:00] 2025-06-06 07:04:39,415 | INFO     | current memory leak: -57.87 B/s (using 79 data points, chi2=0.04)
[2025-06-06 09:05:00] 2025-06-06 07:04:39,415 | INFO     | ..............................
[2025-06-06 09:05:00] 2025-06-06 07:04:39,415 | INFO     | . Timing measurements:
[2025-06-06 09:05:00] 2025-06-06 07:04:39,415 | INFO     | . get job = 0 s
[2025-06-06 09:05:00] 2025-06-06 07:04:39,415 | INFO     | . initial setup = 2 s
[2025-06-06 09:05:00] 2025-06-06 07:04:39,415 | INFO     | . payload setup = 3 s
[2025-06-06 09:05:00] 2025-06-06 07:04:39,416 | INFO     | . stage-in = 0 s
[2025-06-06 09:05:00] 2025-06-06 07:04:39,416 | INFO     | . payload execution = 6376 s
[2025-06-06 09:05:00] 2025-06-06 07:04:39,416 | INFO     | . stage-out = 0 s
[2025-06-06 09:05:00] 2025-06-06 07:04:39,416 | INFO     | . log creation = 0 s
[2025-06-06 09:05:00] 2025-06-06 07:04:39,416 | INFO     | ..............................
[2025-06-06 09:05:00] 2025-06-06 07:04:39,886 | INFO     | 
[2025-06-06 09:05:00] 2025-06-06 07:04:39,886 | INFO     | job summary report
[2025-06-06 09:05:00] 2025-06-06 07:04:39,886 | INFO     | --------------------------------------------------
[2025-06-06 09:05:00] 2025-06-06 07:04:39,886 | INFO     | PanDA job id: 6669239194
[2025-06-06 09:05:00] 2025-06-06 07:04:39,886 | INFO     | task id: 44871837
[2025-06-06 09:05:00] 2025-06-06 07:04:39,886 | INFO     | errors: (none)
[2025-06-06 09:05:00] 2025-06-06 07:04:39,886 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 09:05:00] 2025-06-06 07:04:39,886 | INFO     | pilot state: finished 
[2025-06-06 09:05:00] 2025-06-06 07:04:39,886 | INFO     | transexitcode: 0
[2025-06-06 09:05:00] 2025-06-06 07:04:39,886 | INFO     | exeerrorcode: 0
[2025-06-06 09:05:00] 2025-06-06 07:04:39,887 | INFO     | exeerrordiag: 
[2025-06-06 09:05:00] 2025-06-06 07:04:39,887 | INFO     | exitcode: 0
[2025-06-06 09:05:00] 2025-06-06 07:04:39,887 | INFO     | exitmsg: OK
[2025-06-06 09:05:00] 2025-06-06 07:04:39,887 | INFO     | cpuconsumptiontime: 24662 s
[2025-06-06 09:05:00] 2025-06-06 07:04:39,887 | INFO     | nevents: 400
[2025-06-06 09:05:00] 2025-06-06 07:04:39,887 | INFO     | neventsw: 0
[2025-06-06 09:05:00] 2025-06-06 07:04:39,887 | INFO     | pid: 1526872
[2025-06-06 09:05:00] 2025-06-06 07:04:39,887 | INFO     | pgrp: 1526872
[2025-06-06 09:05:00] 2025-06-06 07:04:39,887 | INFO     | corecount: 4
[2025-06-06 09:05:00] 2025-06-06 07:04:39,887 | INFO     | event service: False
[2025-06-06 09:05:00] 2025-06-06 07:04:39,887 | INFO     | sizes: {0: 2397227, 1: 2397426, 3: 2397632, 11: 2397660, 6383: 2424703, 6384: 2433658, 6386: 2433842, 6390: 2434012}
[2025-06-06 09:05:00] 2025-06-06 07:04:39,887 | INFO     | --------------------------------------------------
[2025-06-06 09:05:00] 2025-06-06 07:04:39,887 | INFO     | 
[2025-06-06 09:05:00] 2025-06-06 07:04:39,887 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2025-06-06 09:05:00] 2025-06-06 07:04:39,898 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 09:05:00] 2025-06-06 07:04:39,898 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 09:05:00] 2025-06-06 07:04:39,898 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 09:05:00] 2025-06-06 07:04:39,898 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 09:05:00] 2025-06-06 07:04:39,898 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 09:05:00] 2025-06-06 07:04:39,898 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 09:05:00] 2025-06-06 07:04:39,898 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 09:05:00] 2025-06-06 07:04:39,898 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 09:05:00] 2025-06-06 07:04:39,898 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 09:05:00] 2025-06-06 07:04:39,898 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 09:05:00] 2025-06-06 07:04:39,898 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 09:05:00] 2025-06-06 07:04:39,898 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 09:05:00] 2025-06-06 07:04:39,899 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 09:05:00] 2025-06-06 07:04:39,899 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 09:05:00] 2025-06-06 07:04:39,899 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 09:05:00] 2025-06-06 07:04:39,899 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 09:05:00] 2025-06-06 07:04:39,899 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 09:05:00] 2025-06-06 07:04:39,899 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 09:05:00] 2025-06-06 07:04:39,899 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 09:05:00] 2025-06-06 07:04:39,899 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 09:05:00] 2025-06-06 07:04:39,899 | INFO     | job 6669239194 has completed (purged errors)
[2025-06-06 09:05:00] 2025-06-06 07:04:39,899 | INFO     | overall cleanup function is called
[2025-06-06 09:05:00] 2025-06-06 07:04:40,905 | INFO     | --- collectZombieJob: --- 10, [1526872]
[2025-06-06 09:05:00] 2025-06-06 07:04:40,905 | INFO     | zombie collector waiting for pid 1526872
[2025-06-06 09:05:00] 2025-06-06 07:04:40,905 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 09:05:00] 2025-06-06 07:04:40,905 | INFO     | collected zombie processes
[2025-06-06 09:05:00] 2025-06-06 07:04:40,905 | INFO     | will attempt to kill all subprocesses of pid=1526872
[2025-06-06 09:05:00] 2025-06-06 07:04:40,971 | INFO     | process IDs to be killed: [1526872] (in reverse order)
[2025-06-06 09:05:00] 2025-06-06 07:04:41,001 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 09:05:00] 2025-06-06 07:04:41,001 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 09:05:00] 2025-06-06 07:04:41,003 | INFO     | did not find any defunct processes belonging to 1526872
[2025-06-06 09:05:00] 2025-06-06 07:04:41,005 | INFO     | did not find any defunct processes belonging to 1526872
[2025-06-06 09:05:00] 2025-06-06 07:04:41,005 | INFO     | ready for new job
[2025-06-06 09:05:00] 2025-06-06 07:04:41,005 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 09:05:00] 2025-06-06 07:04:41,006 | INFO     | **************************************
[2025-06-06 09:05:00] 2025-06-06 07:04:41,006 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 09:05:00] 2025-06-06 07:04:41,006 | INFO     | **************************************
[2025-06-06 09:05:00] 2025-06-06 07:04:41,006 | INFO     | 
[2025-06-06 09:05:00] 2025-06-06 07:04:41,007 | INFO     | architecture information:
[2025-06-06 09:05:00] 2025-06-06 07:04:41,007 | INFO     | executing command: cat /etc/os-release
[2025-06-06 09:05:00] 2025-06-06 07:04:41,016 | INFO     | cat /etc/os-release:
[2025-06-06 09:05:00] NAME="CentOS Linux"
[2025-06-06 09:05:00] VERSION="7 (Core)"
[2025-06-06 09:05:00] ID="centos"
[2025-06-06 09:05:00] ID_LIKE="rhel fedora"
[2025-06-06 09:05:00] VERSION_ID="7"
[2025-06-06 09:05:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 09:05:00] ANSI_COLOR="0;31"
[2025-06-06 09:05:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 09:05:00] HOME_URL="https://www.centos.org/"
[2025-06-06 09:05:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 09:05:00] 
[2025-06-06 09:05:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 09:05:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 09:05:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 09:05:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 09:05:00] 
[2025-06-06 09:05:00] 2025-06-06 07:04:41,016 | INFO     | **************************************
[2025-06-06 09:05:00] 2025-06-06 07:04:41,519 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2025-06-06 09:05:00] 2025-06-06 07:04:41,528 | INFO     | sufficient remaining disk space (637846683648 B)
[2025-06-06 09:05:00] 2025-06-06 07:04:41,528 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 09:05:00] 2025-06-06 07:04:41,528 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 09:05:00] 2025-06-06 07:04:41,528 | INFO     | update_server=False
[2025-06-06 09:05:00] 2025-06-06 07:04:41,528 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 09:05:00] 2025-06-06 07:04:41,528 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 09:05:00] 2025-06-06 07:04:41,528 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 09:05:00] 2025-06-06 07:04:41,574 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 09:05:00] 2025-06-06 07:04:41,574 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 09:05:00] 2025-06-06 07:04:41,574 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 09:05:00] 2025-06-06 07:04:42,014 | INFO     | all payload control threads have been joined
[2025-06-06 09:05:00] 2025-06-06 07:04:42,265 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 09:05:00] 2025-06-06 07:04:42,266 | INFO     | aborting loop
[2025-06-06 09:05:00] 2025-06-06 07:04:42,270 | INFO     | all job control threads have been joined
[2025-06-06 09:05:00] 2025-06-06 07:04:42,355 | INFO     | all data control threads have been joined
[2025-06-06 09:05:00] 2025-06-06 07:04:42,532 | INFO     | [job] retrieve thread has finished
[2025-06-06 09:05:00] 2025-06-06 07:04:42,622 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 09:05:00] 2025-06-06 07:04:43,020 | INFO     | [payload] control thread has finished
[2025-06-06 09:05:00] 2025-06-06 07:04:43,265 | INFO     | [payload] validate_post thread has finished
[2025-06-06 09:05:00] 2025-06-06 07:04:43,270 | INFO     | [job] job monitor thread has finished
[2025-06-06 09:05:00] 2025-06-06 07:04:43,274 | INFO     | [job] control thread has finished
[2025-06-06 09:05:00] 2025-06-06 07:04:43,360 | INFO     | [data] control thread has finished
[2025-06-06 09:05:00] 2025-06-06 07:04:43,374 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 09:05:00] 2025-06-06 07:04:43,413 | INFO     | [data] copytool_in thread has finished
[2025-06-06 09:05:00] 2025-06-06 07:04:43,457 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 09:05:00] 2025-06-06 07:04:43,534 | INFO     | [data] copytool_out thread has finished
[2025-06-06 09:05:00] 2025-06-06 07:04:43,887 | INFO     | [payload] failed_post thread has finished
[2025-06-06 09:05:00] 2025-06-06 07:04:43,973 | INFO     | [job] validate thread has finished
[2025-06-06 09:05:00] 2025-06-06 07:04:44,468 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 09:05:00] 2025-06-06 07:04:45,473 | INFO     | [job] queue monitor thread has finished
[2025-06-06 09:05:00] 2025-06-06 07:04:45,532 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 09:05:00] 2025-06-06 07:04:52,242 | INFO     | job.realtimelogging is not enabled
[2025-06-06 09:05:00] 2025-06-06 07:04:53,247 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 09:05:00] 2025-06-06 07:04:54,924 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125013835138880)>', '<ExcThread(monitor, started 125013009102592)>']
[2025-06-06 09:05:00] 2025-06-06 07:04:55,631 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 09:05:00] 2025-06-06 07:04:55,631 | INFO     | [monitor] control thread has ended
[2025-06-06 09:05:00] 2025-06-06 07:04:59,949 | INFO     | all workflow threads have been joined
[2025-06-06 09:05:00] 2025-06-06 07:04:59,949 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 09:05:00] 2025-06-06 07:04:59,949 | INFO     | traces error code: 0
[2025-06-06 09:05:00] 2025-06-06 07:04:59,949 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 09:05:00] 2025-06-06 07:04:59,996 [wrapper] ==== pilot stdout END ====
[2025-06-06 09:05:00] 2025-06-06 07:04:59,998 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 09:05:00] 2025-06-06 07:04:59,999 [wrapper] pilotpid: 1513624
[2025-06-06 09:05:00] 2025-06-06 07:05:00,001 [wrapper] Pilot exit status: 0
[2025-06-06 09:05:00] 2025-06-06 07:05:00,006 [wrapper] pandaids: 6669239194
[2025-06-06 09:05:00] 2025-06-06 07:05:00,025 [wrapper] cleanup supervisor_pilot 1606805 1513625
[2025-06-06 09:05:00] 2025-06-06 07:05:00,027 [wrapper] Test setup, not cleaning
[2025-06-06 09:05:00] 2025-06-06 07:05:00,028 [wrapper] apfmon messages muted
[2025-06-06 09:05:00] 2025-06-06 07:05:00,030 [wrapper] ==== wrapper stdout END ====
[2025-06-06 09:05:00] 2025-06-06 07:05:00,031 [wrapper] ==== wrapper stderr END ====
[2025-06-06 09:05:00]  *** Error codes and diagnostics ***
[2025-06-06 09:05:00]     "exeErrorCode": 0,
[2025-06-06 09:05:00]     "exeErrorDiag": "",
[2025-06-06 09:05:00]     "pilotErrorCode": 0,
[2025-06-06 09:05:00]     "pilotErrorDiag": "",
[2025-06-06 09:05:00]  *** Listing of results directory ***
[2025-06-06 09:05:00] insgesamt 412848
[2025-06-06 09:05:00] -rw-r--r-- 1 boinc boinc    495897 Mai 29 07:33 pilot3.tar.gz
[2025-06-06 09:05:00] -rw-r--r-- 1 boinc boinc      5111 Mai 29 07:35 queuedata.json
[2025-06-06 09:05:00] -rwx------ 1 boinc boinc     37140 Mai 29 07:37 runpilot2-wrapper.sh
[2025-06-06 09:05:00] -rw-r--r-- 1 boinc boinc       100 Jun  6 07:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 09:05:00] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 07:17 run_atlas
[2025-06-06 09:05:00] -rw-r--r-- 1 boinc boinc       105 Jun  6 07:17 job.xml
[2025-06-06 09:05:00] -rw-r--r-- 2 boinc boinc     15093 Jun  6 07:17 start_atlas.sh
[2025-06-06 09:05:00] drwxrwx--x 2 boinc boinc      4096 Jun  6 07:17 shared
[2025-06-06 09:05:00] -rw-r--r-- 2 boinc boinc    508878 Jun  6 07:17 input.tar.gz
[2025-06-06 09:05:00] -rw-r--r-- 1 boinc boinc      9253 Jun  6 07:17 init_data.xml
[2025-06-06 09:05:00] -rw-r--r-- 2 boinc boinc 224667494 Jun  6 07:17 EVNT.44871834._003777.pool.root.1
[2025-06-06 09:05:00] -rw-r--r-- 1 boinc boinc         0 Jun  6 07:17 boinc_lockfile
[2025-06-06 09:05:00] -rw-r--r-- 1 boinc boinc      2558 Jun  6 07:17 pandaJob.out
[2025-06-06 09:05:00] -rw------- 1 boinc boinc    988109 Jun  6 07:17 agis_schedconf.cvmfs.json
[2025-06-06 09:05:00] -rw------- 1 boinc boinc   1598969 Jun  6 07:17 agis_ddmendpoints.agis.ALL.json
[2025-06-06 09:05:00] drwx------ 4 boinc boinc      4096 Jun  6 07:17 pilot3
[2025-06-06 09:05:00] -rw------- 1 boinc boinc        95 Jun  6 09:03 pilot_heartbeat.json
[2025-06-06 09:05:00] -rw-r--r-- 1 boinc boinc       529 Jun  6 09:04 boinc_task_state.xml
[2025-06-06 09:05:00] -rw------- 1 boinc boinc 192480792 Jun  6 09:04 HITS.44871837._095709.pool.root.1
[2025-06-06 09:05:00] -rw------- 1 boinc boinc      1028 Jun  6 09:04 memory_monitor_summary.json
[2025-06-06 09:05:00] -rw------- 1 boinc boinc    257015 Jun  6 09:04 log.44871837._095709.job.log.tgz.1
[2025-06-06 09:05:00] -rw------- 1 boinc boinc      7660 Jun  6 09:04 heartbeat.json
[2025-06-06 09:05:00] -rw-r--r-- 1 boinc boinc      8192 Jun  6 09:04 boinc_mmap_file
[2025-06-06 09:05:00] -rw-r--r-- 1 boinc boinc        27 Jun  6 09:04 wrapper_checkpoint.txt
[2025-06-06 09:05:00] -rw------- 1 boinc boinc      4433 Jun  6 09:04 pilotlog.txt
[2025-06-06 09:05:00] -rw------- 1 boinc boinc    628869 Jun  6 09:05 log.44871837._095709.job.log.1
[2025-06-06 09:05:00] -rw------- 1 boinc boinc       357 Jun  6 09:05 output.list
[2025-06-06 09:05:00] -rw-r--r-- 1 boinc boinc       620 Jun  6 09:05 runtime_log
[2025-06-06 09:05:00] -rw------- 1 boinc boinc    901120 Jun  6 09:05 result.tar.gz
[2025-06-06 09:05:00] -rw------- 1 boinc boinc       637 Jun  6 09:05 Uh7KDmn8ke7n9Rq4apOajLDm4fhM0noT9bVof3QYDmdiUKDm6Oq0Gn.diag
[2025-06-06 09:05:00] -rw-r--r-- 1 boinc boinc      8687 Jun  6 09:05 runtime_log.err
[2025-06-06 09:05:00] -rw-r--r-- 1 boinc boinc     21135 Jun  6 09:05 stderr.txt
[2025-06-06 09:05:00] HITS file was successfully produced:
[2025-06-06 09:05:00] -rw------- 1 boinc boinc 192480792 Jun  6 09:04 shared/HITS.pool.root.1
[2025-06-06 09:05:00]  *** Contents of shared directory: ***
[2025-06-06 09:05:00] insgesamt 408780
[2025-06-06 09:05:00] -rw-r--r-- 2 boinc boinc     15093 Jun  6 07:17 start_atlas.sh
[2025-06-06 09:05:00] -rw-r--r-- 2 boinc boinc    508878 Jun  6 07:17 input.tar.gz
[2025-06-06 09:05:00] -rw-r--r-- 2 boinc boinc 224667494 Jun  6 07:17 ATLAS.root_0
[2025-06-06 09:05:00] -rw------- 1 boinc boinc 192480792 Jun  6 09:04 HITS.pool.root.1
[2025-06-06 09:05:00] -rw------- 1 boinc boinc    901120 Jun  6 09:05 result.tar.gz
09:05:01 (1506130): run_atlas exited; CPU time 24697.156414
09:05:01 (1506130): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN