Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-06 00:18:10 (18348): Detected: vboxwrapper 26206
2025-06-06 00:18:10 (18348): Detected: BOINC client v8.0.2
2025-06-06 00:18:11 (18348): Detected: VirtualBox VboxManage Interface (Version: 7.1.8)
2025-06-06 00:18:11 (18348): Successfully copied 'init_data.xml' to the shared directory.
2025-06-06 00:18:12 (18348): Create VM. (boinc_d73f89f663ac996f, slot#1)
2025-06-06 00:18:12 (18348): Setting Memory Size for VM. (4800MB)
2025-06-06 00:18:13 (18348): Setting CPU Count for VM. (8)
2025-06-06 00:18:13 (18348): Setting Chipset Options for VM.
2025-06-06 00:18:13 (18348): Setting Graphics Controller Options for VM.
2025-06-06 00:18:13 (18348): Setting Boot Options for VM.
2025-06-06 00:18:14 (18348): Setting Network Configuration for NAT.
2025-06-06 00:18:14 (18348): Enabling VM Network Access.
2025-06-06 00:18:14 (18348): Disabling USB Support for VM.
2025-06-06 00:18:14 (18348): Disabling COM Port Support for VM.
2025-06-06 00:18:15 (18348): Disabling LPT Port Support for VM.
2025-06-06 00:18:15 (18348): Disabling Audio Support for VM.
2025-06-06 00:18:15 (18348): Disabling Clipboard Support for VM.
2025-06-06 00:18:15 (18348): Disabling Drag and Drop Support for VM.
2025-06-06 00:18:16 (18348): Adding storage controller(s) to VM.
2025-06-06 00:18:16 (18348): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-06 00:18:19 (18348): Adding VirtualBox Guest Additions to VM.
2025-06-06 00:18:19 (18348): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-06 00:18:19 (18348): forwarding host port 58024 to guest port 80
2025-06-06 00:18:19 (18348): Enabling remote desktop for VM.
2025-06-06 00:18:20 (18348): Required extension pack not installed, remote desktop not enabled.
2025-06-06 00:18:20 (18348): Enabling shared directory for VM.
2025-06-06 00:18:20 (18348): Starting VM using VBoxManage interface. (boinc_d73f89f663ac996f, slot#1)
2025-06-06 00:18:25 (18348): Successfully started VM. (PID = '16480')
2025-06-06 00:18:25 (18348): Reporting VM Process ID to BOINC.
2025-06-06 00:18:25 (18348): Guest Log: BIOS: VirtualBox 7.1.8
2025-06-06 00:18:25 (18348): Guest Log: CPUID EDX: 0x178bfbff
2025-06-06 00:18:25 (18348): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-06 00:18:25 (18348): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-06 00:18:25 (18348): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-06 00:18:25 (18348): Detected: Web Application Enabled (http://localhost:58024)
2025-06-06 00:18:25 (18348): Preference change detected
2025-06-06 00:18:25 (18348): Setting CPU throttle for VM. (100%)
2025-06-06 00:18:25 (18348): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-06 00:18:27 (18348): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-06 00:18:27 (18348): Guest Log: BIOS: Booting from Hard Disk...
2025-06-06 00:18:30 (18348): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-06 00:18:30 (18348): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-06 00:18:30 (18348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-06 00:18:30 (18348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-06 00:18:30 (18348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-06 00:18:30 (18348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-06 00:18:30 (18348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-06 00:18:30 (18348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-06 00:18:30 (18348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-06 00:18:30 (18348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-06 00:18:30 (18348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-06 00:18:30 (18348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-06 00:18:30 (18348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-06 00:18:30 (18348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-06 00:18:30 (18348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-06 00:18:30 (18348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-06 00:18:30 (18348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-06 00:18:30 (18348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-06 00:18:30 (18348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-06 00:18:30 (18348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-06 00:18:30 (18348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-06 00:18:30 (18348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-06 00:18:30 (18348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-06 00:18:30 (18348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-06 00:18:30 (18348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-06 00:18:30 (18348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-06 00:18:30 (18348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-06 00:18:30 (18348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-06 00:18:30 (18348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-06 00:18:30 (18348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-06 00:18:30 (18348): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-06 00:18:30 (18348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-06 00:18:35 (18348): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-06 00:18:35 (18348): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-06 00:18:38 (18348): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-06 00:18:38 (18348): Guest Log: 00:00:00.000059 main     Log opened 2025-06-06T00:18:36.814574000Z
2025-06-06 00:18:38 (18348): Guest Log: 00:00:00.000118 main     OS Product: Linux
2025-06-06 00:18:38 (18348): Guest Log: 00:00:00.000137 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-06 00:18:38 (18348): Guest Log: 00:00:00.000157 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-06 00:18:38 (18348): Guest Log: 00:00:00.000171 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-06 00:18:38 (18348): Guest Log: 00:00:00.000172 main     Process ID: 1377
2025-06-06 00:18:38 (18348): Guest Log: 00:00:00.000172 main     Package type: LINUX_64BITS_GENERIC
2025-06-06 00:18:38 (18348): Guest Log: 00:00:00.000566 main     5.2.32 r132073 started. Verbose level = 0
2025-06-06 00:18:38 (18348): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-06 00:18:38 (18348): Guest Log: [INFO] Mounting shared directory
2025-06-06 00:18:38 (18348): Guest Log: [INFO] Checking for init_data.xml
2025-06-06 00:18:43 (18348): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-06 00:18:43 (18348): Guest Log: [INFO] Detected branch: prod
2025-06-06 00:18:43 (18348): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-06 00:18:43 (18348): Guest Log: Copying input files
2025-06-06 00:18:44 (18348): Guest Log: Copied input files into RunAtlas.
2025-06-06 00:18:44 (18348): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-06 00:18:44 (18348): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-06 00:18:44 (18348): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-06 00:18:44 (18348): Guest Log: Further information can be found at the LHC@home message board.
2025-06-06 00:18:48 (18348): Guest Log: 00:00:10.002585 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 011 715 526 000ns (GuestNow=1 749 187 128 531 296 000 ns GuestLast=1 749 169 116 815 770 000 ns fSetTimeLastLoop=true )
2025-06-06 00:18:52 (18348): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-06 00:18:53 (18348): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-06 00:18:53 (18348): Guest Log: 2.6.3.0 1656 0 30136 146844 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-06-06 00:18:53 (18348): Guest Log: copied the webapp to /var/www
2025-06-06 00:18:53 (18348): Guest Log: ATHENA_PROC_NUMBER=8
2025-06-06 00:18:53 (18348): Guest Log: ATHENA_CORE_NUMBER=8
2025-06-06 00:18:53 (18348): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-06 00:18:53 (18348): Guest Log:  *** Starting ATLAS job. (PandaID=6668947249 taskID=44871837) ***
2025-06-06 01:55:50 (18348): Guest Log:  *** Job finished ***
2025-06-06 01:55:50 (18348): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-06 01:55:50 (18348): Guest Log: 2025-06-06 06:55:37,926 | INFO     | [payload] control thread has finished
2025-06-06 01:55:50 (18348): Guest Log: 2025-06-06 06:55:38,023 | INFO     | [payload] execute_payloads thread has finished
2025-06-06 01:55:50 (18348): Guest Log: 2025-06-06 06:55:41,453 | INFO     | [data] queue_monitor thread has finished
2025-06-06 01:55:50 (18348): Guest Log: 2025-06-06 06:55:41,772 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139748071675712)>', '<ExcThread(monitor, started 139747313817344)>']
2025-06-06 01:55:50 (18348): Guest Log: 2025-06-06 06:55:42,683 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-06 01:55:50 (18348): Guest Log: 2025-06-06 06:55:42,683 | INFO     | [monitor] control thread has ended
2025-06-06 01:55:50 (18348): Guest Log: 2025-06-06 06:55:46,803 | INFO     | all workflow threads have been joined
2025-06-06 01:55:50 (18348): Guest Log: 2025-06-06 06:55:46,803 | INFO     | end of generic workflow (traces error code: 0)
2025-06-06 01:55:50 (18348): Guest Log: 2025-06-06 06:55:46,803 | INFO     | traces error code: 0
2025-06-06 01:55:50 (18348): Guest Log: 2025-06-06 06:55:46,803 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-06 01:55:50 (18348): Guest Log: 2025-06-06 06:55:46,857 [wrapper] ==== pilot stdout END ====
2025-06-06 01:55:50 (18348): Guest Log: 2025-06-06 06:55:46,860 [wrapper] ==== wrapper stdout RESUME ====
2025-06-06 01:55:50 (18348): Guest Log: 2025-06-06 06:55:46,863 [wrapper] pilotpid: 6008
2025-06-06 01:55:50 (18348): Guest Log: 2025-06-06 06:55:46,865 [wrapper] Pilot exit status: 0
2025-06-06 01:55:50 (18348): Guest Log: 2025-06-06 06:55:46,971 [wrapper] pandaids: 6668947249
2025-06-06 01:55:50 (18348): Guest Log: 2025-06-06 06:55:46,989 [wrapper] cleanup supervisor_pilot  2315 6009
2025-06-06 01:55:50 (18348): Guest Log: 2025-06-06 06:55:46,992 [wrapper] Test setup, not cleaning
2025-06-06 01:55:50 (18348): Guest Log: 2025-06-06 06:55:46,994 [wrapper] apfmon messages muted
2025-06-06 01:55:50 (18348): Guest Log: 2025-06-06 06:55:46,996 [wrapper] ==== wrapper stdout END ====
2025-06-06 01:55:50 (18348): Guest Log: 2025-06-06 06:55:46,999 [wrapper] ==== wrapper stderr END ====
2025-06-06 01:55:50 (18348): Guest Log:  *** Error codes and diagnostics ***
2025-06-06 01:55:50 (18348): Guest Log:     "exeErrorCode": 0,
2025-06-06 01:55:50 (18348): Guest Log:     "exeErrorDiag": "",
2025-06-06 01:55:50 (18348): Guest Log:     "pilotErrorCode": 0,
2025-06-06 01:55:50 (18348): Guest Log:     "pilotErrorDiag": "",
2025-06-06 01:55:50 (18348): Guest Log:  *** Listing of results directory ***
2025-06-06 01:55:50 (18348): Guest Log: total 196936
2025-06-06 01:55:50 (18348): Guest Log: -rwx------. 1 atlas atlas     37140 May 28 22:00 runpilot2-wrapper.sh
2025-06-06 01:55:50 (18348): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 28 22:00 queuedata.json
2025-06-06 01:55:50 (18348): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 28 22:00 pilot3.tar.gz
2025-06-06 01:55:50 (18348): Guest Log: -rwxr-xr-x. 1 atlas atlas      9319 Jun  6 05:18 init_data.xml
2025-06-06 01:55:50 (18348): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 Jun  6 05:18 start_atlas.sh
2025-06-06 01:55:50 (18348): Guest Log: -rwxr-xr-x. 1 atlas atlas    508871 Jun  6 05:18 input.tar.gz
2025-06-06 01:55:50 (18348): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  6 05:18 EVNT.44871834._003541.pool.root.1 -> /data/./ATLAS.root_0
2025-06-06 01:55:50 (18348): Guest Log: -rw-r--r--. 1 atlas atlas      2559 Jun  6 05:18 pandaJob.out
2025-06-06 01:55:50 (18348): Guest Log: -rw-------. 1 atlas atlas    988109 Jun  6 05:19 agis_schedconf.cvmfs.json
2025-06-06 01:55:50 (18348): Guest Log: -rw-------. 1 atlas atlas   1598969 Jun  6 05:19 agis_ddmendpoints.agis.ALL.json
2025-06-06 01:55:50 (18348): Guest Log: drwx------. 4 atlas atlas      4096 Jun  6 05:19 pilot3
2025-06-06 01:55:50 (18348): Guest Log: -rw-------. 1 atlas atlas 196274265 Jun  6 06:55 HITS.44871837._091009.pool.root.1
2025-06-06 01:55:50 (18348): Guest Log: -rw-------. 1 atlas atlas        95 Jun  6 06:55 pilot_heartbeat.json
2025-06-06 01:55:50 (18348): Guest Log: -rw-------. 1 atlas atlas      1025 Jun  6 06:55 memory_monitor_summary.json
2025-06-06 01:55:50 (18348): Guest Log: -rw-------. 1 atlas atlas    302083 Jun  6 06:55 log.44871837._091009.job.log.tgz.1
2025-06-06 01:55:50 (18348): Guest Log: -rw-------. 1 atlas atlas      7672 Jun  6 06:55 heartbeat.json
2025-06-06 01:55:50 (18348): Guest Log: -rw-------. 1 atlas atlas      4413 Jun  6 06:55 pilotlog.txt
2025-06-06 01:55:50 (18348): Guest Log: -rw-------. 1 atlas atlas    510026 Jun  6 06:55 log.44871837._091009.job.log.1
2025-06-06 01:55:50 (18348): Guest Log: -rw-------. 1 atlas atlas       357 Jun  6 06:55 output.list
2025-06-06 01:55:50 (18348): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  6 06:55 runtime_log
2025-06-06 01:55:50 (18348): Guest Log: -rw-------. 1 atlas atlas    829440 Jun  6 06:55 result.tar.gz
2025-06-06 01:55:50 (18348): Guest Log: -rw-r--r--. 1 atlas atlas      8606 Jun  6 06:55 runtime_log.err
2025-06-06 01:55:50 (18348): Guest Log: -rw-------. 1 atlas atlas       660 Jun  6 06:55 mdIMDmJ0de7n9Rq4apOajLDm4fhM0noT9bVof3QYDmuDUKDmeZf3Rm.diag
2025-06-06 01:55:50 (18348): Guest Log: Looking for outputfile HITS.44871837._091009.pool.root.1
2025-06-06 01:55:50 (18348): Guest Log: HITS file was successfully produced
2025-06-06 01:55:50 (18348): Guest Log: -rw-------. 1 atlas atlas 196274265 Jun  6 06:55 /home/atlas/RunAtlas/HITS.44871837._091009.pool.root.1
2025-06-06 01:55:51 (18348): Guest Log: Successfully finished the ATLAS job!
2025-06-06 01:55:51 (18348): Guest Log: Copying the results back to the shared directory!
2025-06-06 01:55:51 (18348): Guest Log:  *** Contents of shared directory: ***
2025-06-06 01:55:51 (18348): Guest Log: total 409952
2025-06-06 01:55:51 (18348): Guest Log: -rwxrwxrwx. 1 root root 222139962 Jun  6 05:18 ATLAS.root_0
2025-06-06 01:55:51 (18348): Guest Log: -rwxrwxrwx. 1 root root 196274265 Jun  6  2025 HITS.pool.root.1
2025-06-06 01:55:51 (18348): Guest Log: -rwxrwxrwx. 1 root root      9319 Jun  6 05:18 init_data.xml
2025-06-06 01:55:51 (18348): Guest Log: -rwxrwxrwx. 1 root root    508871 Jun  6 05:14 input.tar.gz
2025-06-06 01:55:51 (18348): Guest Log: -rwxrwxrwx. 1 root root    829440 Jun  6  2025 result.tar.gz
2025-06-06 01:55:51 (18348): Guest Log: -rwxrwxrwx. 1 root root     15093 Jun  6 05:14 start_atlas.sh
2025-06-06 01:55:51 (18348): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-06 01:55:51 (18348): VM Completion File Detected.
2025-06-06 01:55:51 (18348): Powering off VM.
2025-06-06 01:55:51 (18348): Successfully stopped VM.
2025-06-06 01:55:51 (18348): Deregistering VM. (boinc_d73f89f663ac996f, slot#1)
2025-06-06 01:55:51 (18348): Removing network bandwidth throttle group from VM.
2025-06-06 01:55:51 (18348): Removing VM from VirtualBox.
01:55:57 (18348): called boinc_finish(0)

</stderr_txt>
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