Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:34:24 (3189): wrapper (7.7.26015): starting
12:34:24 (3189): wrapper: running run_atlas (--nthreads 8)
[2025-06-06 12:34:24] Arguments: --nthreads 8
[2025-06-06 12:34:24] Threads: 8
[2025-06-06 12:34:24] Checking for CVMFS
[2025-06-06 12:34:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 12:34:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 12:34:27] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 12:34:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 12:34:27] 2.11.2.0 3171 35962 90184 146851 2 81 21877358 25165825 3918 130560 0 18336264 99.834 22220320 2485 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-06 12:34:27] CVMFS is ok
[2025-06-06 12:34:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 12:34:27] Checking for apptainer binary...
[2025-06-06 12:34:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 12:34:27] Running /usr/bin/apptainer --version
[2025-06-06 12:34:27] apptainer version 1.3.2-1.el7
[2025-06-06 12:34:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 12:34:30] cg-vwn326.simple-grid.lan
[2025-06-06 12:34:30] apptainer works
[2025-06-06 12:34:30] Set ATHENA_PROC_NUMBER=8
[2025-06-06 12:34:30] Set ATHENA_CORE_NUMBER=8
[2025-06-06 12:34:30] Starting ATLAS job with PandaID=6668532352
[2025-06-06 12:34:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/30 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 19:44:00]  *** The last 200 lines of the pilot log: ***
[2025-06-06 19:44:00] 2025-06-06 15:26:53,712 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 19:44:00] 2025-06-06 15:26:53,718 | INFO     | fitting pss+swap vs Time
[2025-06-06 19:44:00] 2025-06-06 15:26:53,719 | INFO     | sum of square deviations: 7178069470.0
[2025-06-06 19:44:00] 2025-06-06 15:26:53,721 | INFO     | sum of deviations: 13252221635.0
[2025-06-06 19:44:00] 2025-06-06 15:26:53,722 | INFO     | mean x: 1749214839.0
[2025-06-06 19:44:00] 2025-06-06 15:26:53,722 | INFO     | mean y: 2477436.5754385963
[2025-06-06 19:44:00] 2025-06-06 15:26:53,722 | INFO     | -- intersect: -3226940003.6626873
[2025-06-06 19:44:00] 2025-06-06 15:26:53,722 | INFO     | intersect: -3226940003.6626873
[2025-06-06 19:44:00] 2025-06-06 15:26:53,722 | INFO     | chi2: 2.4932794050810343
[2025-06-06 19:44:00] 2025-06-06 15:26:53,723 | INFO     | sum of square deviations: 6806862510.0
[2025-06-06 19:44:00] 2025-06-06 15:26:53,725 | INFO     | sum of deviations: 32544638778.500004
[2025-06-06 19:44:00] 2025-06-06 15:26:53,726 | INFO     | mean x: 1749214686.5
[2025-06-06 19:44:00] 2025-06-06 15:26:53,726 | INFO     | mean y: 2485246.7321428573
[2025-06-06 19:44:00] 2025-06-06 15:26:53,726 | INFO     | -- intersect: -8360774630.275367
[2025-06-06 19:44:00] 2025-06-06 15:26:53,726 | INFO     | intersect: -8360774630.275367
[2025-06-06 19:44:00] 2025-06-06 15:26:53,727 | INFO     | chi2: 1.6432271691199776
[2025-06-06 19:44:00] 2025-06-06 15:26:53,727 | INFO     | current chi2=1.6432271691199776 (change=34.09374152887727 %)
[2025-06-06 19:44:00] 2025-06-06 15:26:53,727 | INFO     | sum of square deviations: 6448679050.0
[2025-06-06 19:44:00] 2025-06-06 15:26:53,729 | INFO     | sum of deviations: 31736463961.000008
[2025-06-06 19:44:00] 2025-06-06 15:26:53,730 | INFO     | mean x: 1749214534.0
[2025-06-06 19:44:00] 2025-06-06 15:26:53,730 | INFO     | mean y: 2484902.592727273
[2025-06-06 19:44:00] 2025-06-06 15:26:53,730 | INFO     | -- intersect: -8606081842.304962
[2025-06-06 19:44:00] 2025-06-06 15:26:53,730 | INFO     | intersect: -8606081842.304962
[2025-06-06 19:44:00] 2025-06-06 15:26:53,730 | INFO     | chi2: 1.6438466864118146
[2025-06-06 19:44:00] 2025-06-06 15:26:53,731 | INFO     | current chi2=1.6438466864118146 (change=-0.03770125661741875 %)
[2025-06-06 19:44:00] 2025-06-06 15:26:53,731 | INFO     | right removable region: 274
[2025-06-06 19:44:00] 2025-06-06 15:26:53,731 | INFO     | sum of square deviations: 6806862510.0
[2025-06-06 19:44:00] 2025-06-06 15:26:53,734 | INFO     | sum of deviations: -35431035040.0
[2025-06-06 19:44:00] 2025-06-06 15:26:53,734 | INFO     | mean x: 1749214991.5
[2025-06-06 19:44:00] 2025-06-06 15:26:53,734 | INFO     | mean y: 2497308.692857143
[2025-06-06 19:44:00] 2025-06-06 15:26:53,734 | INFO     | -- intersect: 9107499439.304396
[2025-06-06 19:44:00] 2025-06-06 15:26:53,734 | INFO     | intersect: 9107499439.304396
[2025-06-06 19:44:00] 2025-06-06 15:26:53,735 | INFO     | chi2: 0.9353784916015501
[2025-06-06 19:44:00] 2025-06-06 15:26:53,735 | INFO     | current chi2=0.9353784916015501 (change=62.48400842298902 %)
[2025-06-06 19:44:00] 2025-06-06 15:26:53,735 | INFO     | sum of square deviations: 6448679050.0
[2025-06-06 19:44:00] 2025-06-06 15:26:53,738 | INFO     | sum of deviations: -35018856149.0
[2025-06-06 19:44:00] 2025-06-06 15:26:53,738 | INFO     | mean x: 1749215144.0
[2025-06-06 19:44:00] 2025-06-06 15:26:53,738 | INFO     | mean y: 2497116.556363636
[2025-06-06 19:44:00] 2025-06-06 15:26:53,738 | INFO     | -- intersect: 9501421318.930542
[2025-06-06 19:44:00] 2025-06-06 15:26:53,738 | INFO     | intersect: 9501421318.930542
[2025-06-06 19:44:00] 2025-06-06 15:26:53,738 | INFO     | chi2: 0.9253211250587361
[2025-06-06 19:44:00] 2025-06-06 15:26:53,739 | INFO     | current chi2=0.9253211250587361 (change=1.0752189229403601 %)
[2025-06-06 19:44:00] 2025-06-06 15:26:53,739 | INFO     | left removable region: 20
[2025-06-06 19:44:00] 2025-06-06 15:26:53,739 | INFO     | sum of square deviations: 5081276667.5
[2025-06-06 19:44:00] 2025-06-06 15:26:53,741 | INFO     | sum of deviations: -6900335616.000001
[2025-06-06 19:44:00] 2025-06-06 15:26:53,741 | INFO     | mean x: 1749215113.5
[2025-06-06 19:44:00] 2025-06-06 15:26:53,742 | INFO     | mean y: 2501398.803149606
[2025-06-06 19:44:00] 2025-06-06 15:26:53,742 | INFO     | -- intersect: 2377922407.647387
[2025-06-06 19:44:00] 2025-06-06 15:26:53,742 | INFO     | intersect: 2377922407.647387
[2025-06-06 19:44:00] 2025-06-06 15:26:53,742 | INFO     | chi2: 0.04205707671258411
[2025-06-06 19:44:00] 2025-06-06 15:26:53,742 | INFO     | -- intersect: 2377922407.647387
[2025-06-06 19:44:00] 2025-06-06 15:26:53,742 | INFO     | current memory leak: -1.36 B/s (using 254 data points, chi2=0.04)
[2025-06-06 19:44:00] 2025-06-06 15:26:53,743 | INFO     | ..............................
[2025-06-06 19:44:00] 2025-06-06 15:26:53,744 | INFO     | . Timing measurements:
[2025-06-06 19:44:00] 2025-06-06 15:26:53,744 | INFO     | . get job = 0 s
[2025-06-06 19:44:00] 2025-06-06 15:26:53,744 | INFO     | . initial setup = 10 s
[2025-06-06 19:44:00] 2025-06-06 15:26:53,744 | INFO     | . payload setup = 13 s
[2025-06-06 19:44:00] 2025-06-06 15:26:53,744 | INFO     | . stage-in = 0 s
[2025-06-06 19:44:00] 2025-06-06 15:26:53,744 | INFO     | . payload execution = 17380 s
[2025-06-06 19:44:00] 2025-06-06 15:26:53,744 | INFO     | . stage-out = 1 s
[2025-06-06 19:44:00] 2025-06-06 15:26:53,744 | INFO     | . log creation = 0 s
[2025-06-06 19:44:00] 2025-06-06 15:26:53,744 | INFO     | ..............................
[2025-06-06 19:44:00] 2025-06-06 15:26:53,886 | INFO     | 
[2025-06-06 19:44:00] 2025-06-06 15:26:53,886 | INFO     | job summary report
[2025-06-06 19:44:00] 2025-06-06 15:26:53,886 | INFO     | --------------------------------------------------
[2025-06-06 19:44:00] 2025-06-06 15:26:53,886 | INFO     | PanDA job id: 6668532352
[2025-06-06 19:44:00] 2025-06-06 15:26:53,886 | INFO     | task id: 44871837
[2025-06-06 19:44:00] 2025-06-06 15:26:53,886 | INFO     | errors: (none)
[2025-06-06 19:44:00] 2025-06-06 15:26:53,886 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 19:44:00] 2025-06-06 15:26:53,887 | INFO     | pilot state: finished 
[2025-06-06 19:44:00] 2025-06-06 15:26:53,887 | INFO     | transexitcode: 0
[2025-06-06 19:44:00] 2025-06-06 15:26:53,887 | INFO     | exeerrorcode: 0
[2025-06-06 19:44:00] 2025-06-06 15:26:53,887 | INFO     | exeerrordiag: 
[2025-06-06 19:44:00] 2025-06-06 15:26:53,887 | INFO     | exitcode: 0
[2025-06-06 19:44:00] 2025-06-06 15:26:53,887 | INFO     | exitmsg: OK
[2025-06-06 19:44:00] 2025-06-06 15:26:53,887 | INFO     | cpuconsumptiontime: 64187 s
[2025-06-06 19:44:00] 2025-06-06 15:26:53,887 | INFO     | nevents: 400
[2025-06-06 19:44:00] 2025-06-06 15:26:53,887 | INFO     | neventsw: 0
[2025-06-06 19:44:00] 2025-06-06 15:26:53,888 | INFO     | pid: 13711
[2025-06-06 19:44:00] 2025-06-06 15:26:53,888 | INFO     | pgrp: 13711
[2025-06-06 19:44:00] 2025-06-06 15:26:53,888 | INFO     | corecount: 8
[2025-06-06 19:44:00] 2025-06-06 15:26:53,888 | INFO     | event service: False
[2025-06-06 19:44:00] 2025-06-06 15:26:53,888 | INFO     | sizes: {0: 2397222, 1: 2397421, 9: 2397627, 12: 2397655, 17398: 2428827, 17401: 2437954, 17472: 2438068}
[2025-06-06 19:44:00] 2025-06-06 15:26:53,888 | INFO     | --------------------------------------------------
[2025-06-06 19:44:00] 2025-06-06 15:26:53,888 | INFO     | 
[2025-06-06 19:44:00] 2025-06-06 15:26:53,888 | INFO     | executing command: ls -lF /var/lib/boinc/slots/30
[2025-06-06 19:44:00] 2025-06-06 15:26:53,961 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 19:44:00] 2025-06-06 15:26:53,961 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 19:44:00] 2025-06-06 15:26:53,961 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 19:44:00] 2025-06-06 15:26:53,961 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 19:44:00] 2025-06-06 15:26:53,961 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 19:44:00] 2025-06-06 15:26:53,961 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 19:44:00] 2025-06-06 15:26:53,962 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 19:44:00] 2025-06-06 15:26:53,962 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 19:44:00] 2025-06-06 15:26:53,962 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 19:44:00] 2025-06-06 15:26:53,962 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 19:44:00] 2025-06-06 15:26:53,962 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 19:44:00] 2025-06-06 15:26:53,962 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 19:44:00] 2025-06-06 15:26:53,962 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 19:44:00] 2025-06-06 15:26:53,962 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 19:44:00] 2025-06-06 15:26:53,962 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 19:44:00] 2025-06-06 15:26:53,962 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 19:44:00] 2025-06-06 15:26:53,962 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 19:44:00] 2025-06-06 15:26:53,963 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 19:44:00] 2025-06-06 15:26:53,963 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 19:44:00] 2025-06-06 15:26:53,963 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 19:44:00] 2025-06-06 15:26:53,963 | INFO     | job 6668532352 has completed (purged errors)
[2025-06-06 19:44:00] 2025-06-06 15:26:53,963 | INFO     | overall cleanup function is called
[2025-06-06 19:44:00] 2025-06-06 15:26:54,648 | INFO     | PID=7189 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-06 19:44:00] 2025-06-06 15:26:54,648 | INFO     | .. there are 9 such processes running
[2025-06-06 19:44:00] 2025-06-06 15:26:54,971 | INFO     | --- collectZombieJob: --- 10, [13711]
[2025-06-06 19:44:00] 2025-06-06 15:26:54,972 | INFO     | zombie collector waiting for pid 13711
[2025-06-06 19:44:00] 2025-06-06 15:26:54,972 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 19:44:00] 2025-06-06 15:26:54,972 | INFO     | collected zombie processes
[2025-06-06 19:44:00] 2025-06-06 15:26:54,972 | INFO     | will attempt to kill all subprocesses of pid=13711
[2025-06-06 19:44:00] 2025-06-06 15:26:55,112 | INFO     | process IDs to be killed: [13711] (in reverse order)
[2025-06-06 19:44:00] 2025-06-06 15:26:56,215 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 19:44:00] 2025-06-06 15:26:56,215 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 19:44:00] 2025-06-06 15:26:56,219 | INFO     | did not find any defunct processes belonging to 13711
[2025-06-06 19:44:00] 2025-06-06 15:26:56,221 | INFO     | did not find any defunct processes belonging to 13711
[2025-06-06 19:44:00] 2025-06-06 15:26:56,222 | INFO     | ready for new job
[2025-06-06 19:44:00] 2025-06-06 15:26:56,222 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 19:44:00] 2025-06-06 15:26:56,224 | INFO     | **************************************
[2025-06-06 19:44:00] 2025-06-06 15:26:56,224 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 19:44:00] 2025-06-06 15:26:56,224 | INFO     | **************************************
[2025-06-06 19:44:00] 2025-06-06 15:26:56,224 | INFO     | 
[2025-06-06 19:44:00] 2025-06-06 15:26:56,225 | INFO     | pilot is running in a VM
[2025-06-06 19:44:00] 2025-06-06 15:26:56,225 | INFO     | architecture information:
[2025-06-06 19:44:00] 2025-06-06 15:26:56,237 | INFO     | executing command: cat /etc/os-release
[2025-06-06 19:44:00] 2025-06-06 15:26:56,426 | INFO     | cat /etc/os-release:
[2025-06-06 19:44:00] NAME="CentOS Linux"
[2025-06-06 19:44:00] VERSION="7 (Core)"
[2025-06-06 19:44:00] ID="centos"
[2025-06-06 19:44:00] ID_LIKE="rhel fedora"
[2025-06-06 19:44:00] VERSION_ID="7"
[2025-06-06 19:44:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 19:44:00] ANSI_COLOR="0;31"
[2025-06-06 19:44:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 19:44:00] HOME_URL="https://www.centos.org/"
[2025-06-06 19:44:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 19:44:00] 
[2025-06-06 19:44:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 19:44:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 19:44:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 19:44:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 19:44:00] 
[2025-06-06 19:44:00] 2025-06-06 15:26:56,426 | INFO     | **************************************
[2025-06-06 19:44:00] 2025-06-06 15:26:56,930 | INFO     | executing command: df -mP /var/lib/boinc/slots/30
[2025-06-06 19:44:00] 2025-06-06 15:26:57,214 | INFO     | sufficient remaining disk space (494961426432 B)
[2025-06-06 19:44:00] 2025-06-06 15:26:57,215 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 19:44:00] 2025-06-06 15:26:57,215 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 19:44:00] 2025-06-06 15:26:57,215 | INFO     | update_server=False
[2025-06-06 19:44:00] 2025-06-06 15:26:57,215 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 19:44:00] 2025-06-06 15:26:57,215 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 19:44:00] 2025-06-06 15:26:57,216 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 19:44:00] 2025-06-06 15:26:57,216 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 19:44:00] 2025-06-06 15:26:57,216 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 19:44:00] 2025-06-06 15:26:57,216 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 19:44:00] 2025-06-06 15:26:57,458 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 19:44:00] 2025-06-06 15:26:57,459 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 19:44:00] 2025-06-06 15:26:57,459 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 19:44:00] 2025-06-06 15:26:57,459 | INFO     | will abort loop
[2025-06-06 19:44:00] 2025-06-06 15:26:58,222 | INFO     | [job] retrieve thread has finished
[2025-06-06 19:44:00] 2025-06-06 15:26:58,265 | INFO     | all data control threads have been joined
[2025-06-06 19:44:00] 2025-06-06 15:26:58,285 | INFO     | [payload] failed_post thread has finished
[2025-06-06 19:44:00] 2025-06-06 15:26:58,385 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 19:44:00] 2025-06-06 15:26:58,416 | INFO     | all job control threads have been joined
[2025-06-06 19:44:00] 2025-06-06 15:26:58,465 | INFO     | [job] job monitor thread has finished
[2025-06-06 19:44:00] 2025-06-06 15:26:58,495 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 19:44:00] 2025-06-06 15:26:58,523 | INFO     | all payload control threads have been joined
[2025-06-06 19:44:00] 2025-06-06 15:26:58,527 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 19:44:00] 2025-06-06 15:26:58,562 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 19:44:00] 2025-06-06 15:26:58,824 | INFO     | [job] validate thread has finished
[2025-06-06 19:44:00] 2025-06-06 15:26:58,883 | INFO     | [data] copytool_in thread has finished
[2025-06-06 19:44:00] 2025-06-06 15:26:58,889 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 19:44:00] 2025-06-06 15:26:58,973 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 19:44:00] 2025-06-06 15:26:59,171 | INFO     | [payload] validate_post thread has finished
[2025-06-06 19:44:00] 2025-06-06 15:26:59,272 | INFO     | [data] control thread has finished
[2025-06-06 19:44:00] 2025-06-06 15:26:59,422 | INFO     | [job] control thread has finished
[2025-06-06 19:44:00] 2025-06-06 15:26:59,532 | INFO     | [payload] control thread has finished
[2025-06-06 19:44:00] 2025-06-06 15:26:59,895 | INFO     | [job] queue monitor thread has finished
[2025-06-06 19:44:00] 2025-06-06 15:27:00,570 | INFO     | [data] copytool_out thread has finished
[2025-06-06 19:44:00] 2025-06-06 15:27:01,224 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 19:44:00] 2025-06-06 15:27:01,932 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139651083806528)>', '<ExcThread(monitor, started 139650500904704)>']
[2025-06-06 19:44:00] 2025-06-06 15:27:02,246 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 19:44:00] 2025-06-06 15:27:02,247 | INFO     | [monitor] control thread has ended
[2025-06-06 19:44:00] 2025-06-06 15:27:06,957 | INFO     | all workflow threads have been joined
[2025-06-06 19:44:00] 2025-06-06 15:27:06,958 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 19:44:00] 2025-06-06 15:27:06,958 | INFO     | traces error code: 0
[2025-06-06 19:44:00] 2025-06-06 15:27:06,958 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 19:44:00] 2025-06-06 15:27:07,359 [wrapper] ==== pilot stdout END ====
[2025-06-06 19:44:00] 2025-06-06 15:27:07,480 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 19:44:00] 2025-06-06 15:27:07,573 [wrapper] pilotpid: 7189
[2025-06-06 19:44:00] 2025-06-06 15:27:07,676 [wrapper] Pilot exit status: 0
[2025-06-06 19:44:00] 2025-06-06 15:27:08,081 [wrapper] pandaids: 6668532352
[2025-06-06 19:44:00] 2025-06-06 15:27:08,867 [wrapper] cleanup supervisor_pilot  8999 7190
[2025-06-06 19:44:00] 2025-06-06 15:27:08,948 [wrapper] Test setup, not cleaning
[2025-06-06 19:44:00] 2025-06-06 15:27:09,026 [wrapper] apfmon messages muted
[2025-06-06 19:44:00] 2025-06-06 15:27:09,140 [wrapper] ==== wrapper stdout END ====
[2025-06-06 19:44:00] 2025-06-06 15:27:09,235 [wrapper] ==== wrapper stderr END ====
[2025-06-06 19:44:00]  *** Error codes and diagnostics ***
[2025-06-06 19:44:00]     "exeErrorCode": 0,
[2025-06-06 19:44:00]     "exeErrorDiag": "",
[2025-06-06 19:44:00]     "pilotErrorCode": 0,
[2025-06-06 19:44:00]     "pilotErrorDiag": "",
[2025-06-06 19:44:00]  *** Listing of results directory ***
[2025-06-06 19:44:00] total 413944
[2025-06-06 19:44:00] -rw-r--r--. 1 boinc boinc    495897 May 28 16:07 pilot3.tar.gz
[2025-06-06 19:44:00] -rw-r--r--. 1 boinc boinc      5111 May 28 16:27 queuedata.json
[2025-06-06 19:44:00] -rwx------. 1 boinc boinc     37140 May 28 16:28 runpilot2-wrapper.sh
[2025-06-06 19:44:00] -rw-r--r--. 1 boinc boinc       100 Jun  6 12:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 19:44:00] -rwxr-xr-x. 1 boinc boinc      7986 Jun  6 12:34 run_atlas
[2025-06-06 19:44:00] -rw-r--r--. 1 boinc boinc       105 Jun  6 12:34 job.xml
[2025-06-06 19:44:00] -rw-r--r--. 2 boinc boinc 226478903 Jun  6 12:34 EVNT.44871834._003338.pool.root.1
[2025-06-06 19:44:00] -rw-r--r--. 2 boinc boinc    508881 Jun  6 12:34 input.tar.gz
[2025-06-06 19:44:00] -rw-r--r--. 1 boinc boinc      6392 Jun  6 12:34 init_data.xml
[2025-06-06 19:44:00] -rw-r--r--. 2 boinc boinc     15093 Jun  6 12:34 start_atlas.sh
[2025-06-06 19:44:00] drwxrwx--x. 2 boinc boinc        68 Jun  6 12:34 shared
[2025-06-06 19:44:00] -rw-r--r--. 1 boinc boinc         0 Jun  6 12:34 boinc_lockfile
[2025-06-06 19:44:00] -rw-r--r--. 1 boinc boinc      2559 Jun  6 12:34 pandaJob.out
[2025-06-06 19:44:00] -rw-------. 1 boinc boinc    985732 Jun  6 12:35 agis_schedconf.cvmfs.json
[2025-06-06 19:44:00] drwx------. 4 boinc boinc      4096 Jun  6 12:35 pilot3
[2025-06-06 19:44:00] -rw-------. 1 boinc boinc 189745524 Jun  6 17:24 HITS.44871837._085597.pool.root.1
[2025-06-06 19:44:00] -rw-r--r--. 1 boinc boinc       531 Jun  6 17:25 boinc_task_state.xml
[2025-06-06 19:44:00] -rw-------. 1 boinc boinc      1021 Jun  6 17:25 memory_monitor_summary.json
[2025-06-06 19:44:00] -rw-------. 1 boinc boinc   1598969 Jun  6 17:25 agis_ddmendpoints.agis.ALL.json
[2025-06-06 19:44:00] -rw-------. 1 boinc boinc    411850 Jun  6 17:25 log.44871837._085597.job.log.tgz.1
[2025-06-06 19:44:00] -rw-------. 1 boinc boinc        95 Jun  6 17:26 pilot_heartbeat.json
[2025-06-06 19:44:00] -rw-------. 1 boinc boinc      7689 Jun  6 17:26 heartbeat.json
[2025-06-06 19:44:00] -rw-------. 1 boinc boinc      4726 Jun  6 17:27 pilotlog.txt
[2025-06-06 19:44:00] -rw-------. 1 boinc boinc   1508025 Jun  6 17:27 log.44871837._085597.job.log.1
[2025-06-06 19:44:00] -rw-------. 1 boinc boinc       357 Jun  6 17:27 output.list
[2025-06-06 19:44:00] -rw-r--r--. 1 boinc boinc       620 Jun  6 17:27 runtime_log
[2025-06-06 19:44:00] -rw-------. 1 boinc boinc   1935360 Jun  6 17:27 result.tar.gz
[2025-06-06 19:44:00] -rw-r--r--. 1 boinc boinc      8673 Jun  6 17:27 runtime_log.err
[2025-06-06 19:44:00] -rw-------. 1 boinc boinc       657 Jun  6 17:27 dv4NDmawWe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmjeTKDm8wyfPn.diag
[2025-06-06 19:44:00] -rw-r--r--. 1 boinc boinc      8192 Jun  6 19:44 boinc_mmap_file
[2025-06-06 19:44:00] -rw-r--r--. 1 boinc boinc        28 Jun  6 19:44 wrapper_checkpoint.txt
[2025-06-06 19:44:00] -rw-r--r--. 1 boinc boinc     20593 Jun  6 19:44 stderr.txt
[2025-06-06 19:44:00] HITS file was successfully produced:
[2025-06-06 19:44:00] -rw-------. 1 boinc boinc 189745524 Jun  6 17:24 shared/HITS.pool.root.1
[2025-06-06 19:44:00]  *** Contents of shared directory: ***
[2025-06-06 19:44:00] total 408880
[2025-06-06 19:44:00] -rw-r--r--. 2 boinc boinc 226478903 Jun  6 12:34 ATLAS.root_0
[2025-06-06 19:44:00] -rw-r--r--. 2 boinc boinc    508881 Jun  6 12:34 input.tar.gz
[2025-06-06 19:44:00] -rw-r--r--. 2 boinc boinc     15093 Jun  6 12:34 start_atlas.sh
[2025-06-06 19:44:00] -rw-------. 1 boinc boinc 189745524 Jun  6 17:24 HITS.pool.root.1
[2025-06-06 19:44:00] -rw-------. 1 boinc boinc   1935360 Jun  6 17:27 result.tar.gz
19:44:02 (3189): run_atlas exited; CPU time 64388.135934
19:44:02 (3189): called boinc_finish(0)

</stderr_txt>
]]>

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