Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:55:34 (27156): wrapper (7.7.26015): starting
06:55:34 (27156): wrapper: running run_atlas (--nthreads 8)
[2025-06-06 06:55:34] Arguments: --nthreads 8
[2025-06-06 06:55:34] Threads: 8
[2025-06-06 06:55:34] Checking for CVMFS
[2025-06-06 06:55:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 06:55:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 06:55:37] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 06:55:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 06:55:38] 2.11.2.0 3171 35623 91216 146843 0 219 21531999 25165825 3868 130560 0 18122266 99.832 22059243 2475 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-06 06:55:38] CVMFS is ok
[2025-06-06 06:55:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 06:55:38] Checking for apptainer binary...
[2025-06-06 06:55:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 06:55:38] Running /usr/bin/apptainer --version
[2025-06-06 06:55:38] apptainer version 1.3.2-1.el7
[2025-06-06 06:55:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 06:57:36] cg-vwn326.simple-grid.lan
[2025-06-06 06:57:36] apptainer works
[2025-06-06 06:57:36] Set ATHENA_PROC_NUMBER=8
[2025-06-06 06:57:36] Set ATHENA_CORE_NUMBER=8
[2025-06-06 06:57:36] Starting ATLAS job with PandaID=6670939895
[2025-06-06 06:57:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/30 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 12:34:19]  *** The last 200 lines of the pilot log: ***
[2025-06-06 12:34:19] 2025-06-06 10:22:19,331 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 12:34:19] 2025-06-06 10:22:21,166 | INFO     | PID=31227 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-06 12:34:19] 2025-06-06 10:22:21,166 | INFO     | .. there are 9 such processes running
[2025-06-06 12:34:19] 2025-06-06 10:22:21,836 | INFO     | monitor loop #1381: job 0:6670939895 is in state 'finished'
[2025-06-06 12:34:19] 2025-06-06 10:22:21,836 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 12:34:19] 2025-06-06 10:22:22,936 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 12:34:19] 2025-06-06 10:22:22,937 | INFO     | using path: /var/lib/boinc/slots/30/PanDA_Pilot-6670939895/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 12:34:19] 2025-06-06 10:22:22,938 | INFO     | extracted standard info from prmon json
[2025-06-06 12:34:19] 2025-06-06 10:22:22,938 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 12:34:19] 2025-06-06 10:22:22,938 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 12:34:19] 2025-06-06 10:22:22,939 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 12:34:19] 2025-06-06 10:22:22,939 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 12:34:19] 2025-06-06 10:22:22,946 | INFO     | fitting pss+swap vs Time
[2025-06-06 12:34:19] 2025-06-06 10:22:22,947 | INFO     | sum of square deviations: 9059954057.0
[2025-06-06 12:34:19] 2025-06-06 10:22:22,950 | INFO     | sum of deviations: 90219122732.0
[2025-06-06 12:34:19] 2025-06-06 10:22:22,951 | INFO     | mean x: 1749195867.5
[2025-06-06 12:34:19] 2025-06-06 10:22:22,951 | INFO     | mean y: 2466262.8571428573
[2025-06-06 12:34:19] 2025-06-06 10:22:22,951 | INFO     | -- intersect: -17416045537.47148
[2025-06-06 12:34:19] 2025-06-06 10:22:22,951 | INFO     | intersect: -17416045537.47148
[2025-06-06 12:34:19] 2025-06-06 10:22:22,952 | INFO     | chi2: 4.663884048092521
[2025-06-06 12:34:19] 2025-06-06 10:22:22,952 | INFO     | sum of square deviations: 8625843592.0
[2025-06-06 12:34:19] 2025-06-06 10:22:22,955 | INFO     | sum of deviations: 108761430470.0
[2025-06-06 12:34:19] 2025-06-06 10:22:22,955 | INFO     | mean x: 1749195715.0
[2025-06-06 12:34:19] 2025-06-06 10:22:22,956 | INFO     | mean y: 2472682.702970297
[2025-06-06 12:34:19] 2025-06-06 10:22:22,956 | INFO     | -- intersect: -22052764710.17491
[2025-06-06 12:34:19] 2025-06-06 10:22:22,956 | INFO     | intersect: -22052764710.17491
[2025-06-06 12:34:19] 2025-06-06 10:22:22,956 | INFO     | chi2: 3.9143304104063903
[2025-06-06 12:34:19] 2025-06-06 10:22:22,957 | INFO     | current chi2=3.9143304104063903 (change=16.071446673136965 %)
[2025-06-06 12:34:19] 2025-06-06 10:22:22,957 | INFO     | right removable region: 302
[2025-06-06 12:34:19] 2025-06-06 10:22:22,957 | INFO     | sum of square deviations: 8625843592.0
[2025-06-06 12:34:19] 2025-06-06 10:22:22,960 | INFO     | sum of deviations: -6853435338.999998
[2025-06-06 12:34:19] 2025-06-06 10:22:22,960 | INFO     | mean x: 1749196020.0
[2025-06-06 12:34:19] 2025-06-06 10:22:22,961 | INFO     | mean y: 2500305.871287129
[2025-06-06 12:34:19] 2025-06-06 10:22:22,961 | INFO     | -- intersect: 1392277629.1494842
[2025-06-06 12:34:19] 2025-06-06 10:22:22,961 | INFO     | intersect: 1392277629.1494842
[2025-06-06 12:34:19] 2025-06-06 10:22:22,961 | INFO     | chi2: 0.8700731863052755
[2025-06-06 12:34:19] 2025-06-06 10:22:22,961 | INFO     | current chi2=0.8700731863052755 (change=81.34445073390866 %)
[2025-06-06 12:34:19] 2025-06-06 10:22:22,962 | INFO     | sum of square deviations: 8205826414.5
[2025-06-06 12:34:19] 2025-06-06 10:22:22,965 | INFO     | sum of deviations: -18463075783.500004
[2025-06-06 12:34:19] 2025-06-06 10:22:22,965 | INFO     | mean x: 1749196172.5
[2025-06-06 12:34:19] 2025-06-06 10:22:22,965 | INFO     | mean y: 2504494.748322148
[2025-06-06 12:34:19] 2025-06-06 10:22:22,965 | INFO     | -- intersect: 3938188710.0527334
[2025-06-06 12:34:19] 2025-06-06 10:22:22,965 | INFO     | intersect: 3938188710.0527334
[2025-06-06 12:34:19] 2025-06-06 10:22:22,966 | INFO     | chi2: 0.7945835487507584
[2025-06-06 12:34:19] 2025-06-06 10:22:22,966 | INFO     | current chi2=0.7945835487507584 (change=8.67623996954558 %)
[2025-06-06 12:34:19] 2025-06-06 10:22:22,966 | INFO     | left removable region: 20
[2025-06-06 12:34:19] 2025-06-06 10:22:22,967 | INFO     | sum of square deviations: 6953769450.5
[2025-06-06 12:34:19] 2025-06-06 10:22:22,969 | INFO     | sum of deviations: -1379741828.5000014
[2025-06-06 12:34:19] 2025-06-06 10:22:22,969 | INFO     | mean x: 1749196294.5
[2025-06-06 12:34:19] 2025-06-06 10:22:22,970 | INFO     | mean y: 2512787.7482269504
[2025-06-06 12:34:19] 2025-06-06 10:22:22,970 | INFO     | -- intersect: 349582001.2099017
[2025-06-06 12:34:19] 2025-06-06 10:22:22,970 | INFO     | intersect: 349582001.2099017
[2025-06-06 12:34:19] 2025-06-06 10:22:22,970 | INFO     | chi2: 0.006204714571506415
[2025-06-06 12:34:19] 2025-06-06 10:22:22,971 | INFO     | -- intersect: 349582001.2099017
[2025-06-06 12:34:19] 2025-06-06 10:22:22,971 | INFO     | current memory leak: -0.20 B/s (using 282 data points, chi2=0.01)
[2025-06-06 12:34:19] 2025-06-06 10:22:22,972 | INFO     | ..............................
[2025-06-06 12:34:19] 2025-06-06 10:22:22,972 | INFO     | . Timing measurements:
[2025-06-06 12:34:19] 2025-06-06 10:22:22,972 | INFO     | . get job = 0 s
[2025-06-06 12:34:19] 2025-06-06 10:22:22,972 | INFO     | . initial setup = 4 s
[2025-06-06 12:34:19] 2025-06-06 10:22:22,972 | INFO     | . payload setup = 132 s
[2025-06-06 12:34:19] 2025-06-06 10:22:22,973 | INFO     | . stage-in = 0 s
[2025-06-06 12:34:19] 2025-06-06 10:22:22,973 | INFO     | . payload execution = 18884 s
[2025-06-06 12:34:19] 2025-06-06 10:22:22,973 | INFO     | . stage-out = 6 s
[2025-06-06 12:34:19] 2025-06-06 10:22:22,973 | INFO     | . log creation = 1 s
[2025-06-06 12:34:19] 2025-06-06 10:22:22,973 | INFO     | ..............................
[2025-06-06 12:34:19] 2025-06-06 10:22:23,497 | INFO     | 
[2025-06-06 12:34:19] 2025-06-06 10:22:23,497 | INFO     | job summary report
[2025-06-06 12:34:19] 2025-06-06 10:22:23,497 | INFO     | --------------------------------------------------
[2025-06-06 12:34:19] 2025-06-06 10:22:23,497 | INFO     | PanDA job id: 6670939895
[2025-06-06 12:34:19] 2025-06-06 10:22:23,497 | INFO     | task id: 44871837
[2025-06-06 12:34:19] 2025-06-06 10:22:23,497 | INFO     | errors: (none)
[2025-06-06 12:34:19] 2025-06-06 10:22:23,497 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 12:34:19] 2025-06-06 10:22:23,498 | INFO     | pilot state: finished 
[2025-06-06 12:34:19] 2025-06-06 10:22:23,498 | INFO     | transexitcode: 0
[2025-06-06 12:34:19] 2025-06-06 10:22:23,498 | INFO     | exeerrorcode: 0
[2025-06-06 12:34:19] 2025-06-06 10:22:23,498 | INFO     | exeerrordiag: 
[2025-06-06 12:34:19] 2025-06-06 10:22:23,498 | INFO     | exitcode: 0
[2025-06-06 12:34:19] 2025-06-06 10:22:23,498 | INFO     | exitmsg: OK
[2025-06-06 12:34:19] 2025-06-06 10:22:23,498 | INFO     | cpuconsumptiontime: 70839 s
[2025-06-06 12:34:19] 2025-06-06 10:22:23,498 | INFO     | nevents: 400
[2025-06-06 12:34:19] 2025-06-06 10:22:23,498 | INFO     | neventsw: 0
[2025-06-06 12:34:19] 2025-06-06 10:22:23,498 | INFO     | pid: 5535
[2025-06-06 12:34:19] 2025-06-06 10:22:23,498 | INFO     | pgrp: 5535
[2025-06-06 12:34:19] 2025-06-06 10:22:23,498 | INFO     | corecount: 8
[2025-06-06 12:34:19] 2025-06-06 10:22:23,499 | INFO     | event service: False
[2025-06-06 12:34:19] 2025-06-06 10:22:23,499 | INFO     | sizes: {0: 2397116, 1: 2397371, 12: 2397371, 23: 2397399, 33: 2397427, 44: 2397483, 55: 2397639, 66: 2397667, 76: 2397695, 81: 2397957, 87: 2397985, 19021: 2430036
[2025-06-06 12:34:19] 2025-06-06 10:22:23,499 | INFO     | --------------------------------------------------
[2025-06-06 12:34:19] 2025-06-06 10:22:23,499 | INFO     | 
[2025-06-06 12:34:19] 2025-06-06 10:22:23,499 | INFO     | executing command: ls -lF /var/lib/boinc/slots/30
[2025-06-06 12:34:19] 2025-06-06 10:22:23,822 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 12:34:19] 2025-06-06 10:22:23,823 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 12:34:19] 2025-06-06 10:22:23,823 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 12:34:19] 2025-06-06 10:22:23,823 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 12:34:19] 2025-06-06 10:22:23,823 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 12:34:19] 2025-06-06 10:22:23,823 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 12:34:19] 2025-06-06 10:22:23,823 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 12:34:19] 2025-06-06 10:22:23,823 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 12:34:19] 2025-06-06 10:22:23,823 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 12:34:19] 2025-06-06 10:22:23,824 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 12:34:19] 2025-06-06 10:22:23,824 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 12:34:19] 2025-06-06 10:22:23,824 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 12:34:19] 2025-06-06 10:22:23,824 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 12:34:19] 2025-06-06 10:22:23,824 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 12:34:19] 2025-06-06 10:22:23,824 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 12:34:19] 2025-06-06 10:22:23,824 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 12:34:19] 2025-06-06 10:22:23,824 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 12:34:19] 2025-06-06 10:22:23,824 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 12:34:19] 2025-06-06 10:22:23,824 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 12:34:19] 2025-06-06 10:22:23,824 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 12:34:19] 2025-06-06 10:22:23,825 | INFO     | job 6670939895 has completed (purged errors)
[2025-06-06 12:34:19] 2025-06-06 10:22:23,825 | INFO     | overall cleanup function is called
[2025-06-06 12:34:19] 2025-06-06 10:22:24,835 | INFO     | --- collectZombieJob: --- 10, [5535]
[2025-06-06 12:34:19] 2025-06-06 10:22:24,835 | INFO     | zombie collector waiting for pid 5535
[2025-06-06 12:34:19] 2025-06-06 10:22:24,835 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 12:34:19] 2025-06-06 10:22:24,835 | INFO     | collected zombie processes
[2025-06-06 12:34:19] 2025-06-06 10:22:24,835 | INFO     | will attempt to kill all subprocesses of pid=5535
[2025-06-06 12:34:19] 2025-06-06 10:22:24,961 | INFO     | process IDs to be killed: [5535] (in reverse order)
[2025-06-06 12:34:19] 2025-06-06 10:22:25,732 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 12:34:19] 2025-06-06 10:22:25,733 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 12:34:19] 2025-06-06 10:22:25,741 | INFO     | did not find any defunct processes belonging to 5535
[2025-06-06 12:34:19] 2025-06-06 10:22:25,745 | INFO     | did not find any defunct processes belonging to 5535
[2025-06-06 12:34:19] 2025-06-06 10:22:25,745 | INFO     | ready for new job
[2025-06-06 12:34:19] 2025-06-06 10:22:25,745 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 12:34:19] 2025-06-06 10:22:25,747 | INFO     | **************************************
[2025-06-06 12:34:19] 2025-06-06 10:22:25,747 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 12:34:19] 2025-06-06 10:22:25,748 | INFO     | **************************************
[2025-06-06 12:34:19] 2025-06-06 10:22:25,748 | INFO     | 
[2025-06-06 12:34:19] 2025-06-06 10:22:25,748 | INFO     | pilot is running in a VM
[2025-06-06 12:34:19] 2025-06-06 10:22:25,748 | INFO     | architecture information:
[2025-06-06 12:34:19] 2025-06-06 10:22:25,758 | INFO     | executing command: cat /etc/os-release
[2025-06-06 12:34:19] 2025-06-06 10:22:25,903 | INFO     | cat /etc/os-release:
[2025-06-06 12:34:19] NAME="CentOS Linux"
[2025-06-06 12:34:19] VERSION="7 (Core)"
[2025-06-06 12:34:19] ID="centos"
[2025-06-06 12:34:19] ID_LIKE="rhel fedora"
[2025-06-06 12:34:19] VERSION_ID="7"
[2025-06-06 12:34:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 12:34:19] ANSI_COLOR="0;31"
[2025-06-06 12:34:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 12:34:19] HOME_URL="https://www.centos.org/"
[2025-06-06 12:34:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 12:34:19] 
[2025-06-06 12:34:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 12:34:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 12:34:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 12:34:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 12:34:19] 
[2025-06-06 12:34:19] 2025-06-06 10:22:25,904 | INFO     | **************************************
[2025-06-06 12:34:19] 2025-06-06 10:22:26,408 | INFO     | executing command: df -mP /var/lib/boinc/slots/30
[2025-06-06 12:34:19] 2025-06-06 10:22:26,617 | INFO     | sufficient remaining disk space (496265854976 B)
[2025-06-06 12:34:19] 2025-06-06 10:22:26,618 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 12:34:19] 2025-06-06 10:22:26,618 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 12:34:19] 2025-06-06 10:22:26,618 | INFO     | update_server=False
[2025-06-06 12:34:19] 2025-06-06 10:22:26,618 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 12:34:19] 2025-06-06 10:22:26,620 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 12:34:19] 2025-06-06 10:22:26,760 | INFO     | all payload control threads have been joined
[2025-06-06 12:34:19] 2025-06-06 10:22:26,850 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 12:34:19] 2025-06-06 10:22:26,850 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 12:34:19] 2025-06-06 10:22:26,850 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 12:34:19] 2025-06-06 10:22:26,850 | INFO     | will abort loop
[2025-06-06 12:34:19] 2025-06-06 10:22:27,151 | INFO     | all data control threads have been joined
[2025-06-06 12:34:19] 2025-06-06 10:22:27,187 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 12:34:19] 2025-06-06 10:22:27,187 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 12:34:19] 2025-06-06 10:22:27,187 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 12:34:19] 2025-06-06 10:22:27,625 | INFO     | [job] retrieve thread has finished
[2025-06-06 12:34:19] 2025-06-06 10:22:27,665 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 12:34:19] 2025-06-06 10:22:27,767 | INFO     | [payload] control thread has finished
[2025-06-06 12:34:19] 2025-06-06 10:22:27,792 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 12:34:19] 2025-06-06 10:22:27,857 | INFO     | [job] job monitor thread has finished
[2025-06-06 12:34:19] 2025-06-06 10:22:27,926 | INFO     | [data] copytool_in thread has finished
[2025-06-06 12:34:19] 2025-06-06 10:22:28,029 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 12:34:19] 2025-06-06 10:22:28,098 | INFO     | all job control threads have been joined
[2025-06-06 12:34:19] 2025-06-06 10:22:28,114 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 12:34:19] 2025-06-06 10:22:28,119 | INFO     | [job] validate thread has finished
[2025-06-06 12:34:19] 2025-06-06 10:22:28,158 | INFO     | [data] control thread has finished
[2025-06-06 12:34:19] 2025-06-06 10:22:28,304 | INFO     | [payload] failed_post thread has finished
[2025-06-06 12:34:19] 2025-06-06 10:22:28,372 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 12:34:19] 2025-06-06 10:22:28,539 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 12:34:19] 2025-06-06 10:22:28,928 | INFO     | [payload] validate_post thread has finished
[2025-06-06 12:34:19] 2025-06-06 10:22:29,105 | INFO     | [job] control thread has finished
[2025-06-06 12:34:19] 2025-06-06 10:22:29,119 | INFO     | [job] queue monitor thread has finished
[2025-06-06 12:34:19] 2025-06-06 10:22:29,799 | INFO     | [data] copytool_out thread has finished
[2025-06-06 12:34:19] 2025-06-06 10:22:30,629 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 12:34:19] 2025-06-06 10:22:31,636 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139835207186240)>', '<ExcThread(monitor, started 139834337261312)>']
[2025-06-06 12:34:19] 2025-06-06 10:22:32,216 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 12:34:19] 2025-06-06 10:22:32,217 | INFO     | [monitor] control thread has ended
[2025-06-06 12:34:19] 2025-06-06 10:22:36,661 | INFO     | all workflow threads have been joined
[2025-06-06 12:34:19] 2025-06-06 10:22:36,662 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 12:34:19] 2025-06-06 10:22:36,662 | INFO     | traces error code: 0
[2025-06-06 12:34:19] 2025-06-06 10:22:36,662 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 12:34:19] 2025-06-06 10:22:37,097 [wrapper] ==== pilot stdout END ====
[2025-06-06 12:34:19] 2025-06-06 10:22:37,229 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 12:34:19] 2025-06-06 10:22:37,331 [wrapper] pilotpid: 31227
[2025-06-06 12:34:19] 2025-06-06 10:22:37,452 [wrapper] Pilot exit status: 0
[2025-06-06 12:34:19] 2025-06-06 10:22:37,947 [wrapper] pandaids: 6670939895
[2025-06-06 12:34:19] 2025-06-06 10:22:38,514 [wrapper] cleanup supervisor_pilot 28841 31228
[2025-06-06 12:34:19] 2025-06-06 10:22:38,564 [wrapper] Test setup, not cleaning
[2025-06-06 12:34:19] 2025-06-06 10:22:38,655 [wrapper] apfmon messages muted
[2025-06-06 12:34:19] 2025-06-06 10:22:38,712 [wrapper] ==== wrapper stdout END ====
[2025-06-06 12:34:19] 2025-06-06 10:22:38,811 [wrapper] ==== wrapper stderr END ====
[2025-06-06 12:34:19]  *** Error codes and diagnostics ***
[2025-06-06 12:34:19]     "exeErrorCode": 0,
[2025-06-06 12:34:19]     "exeErrorDiag": "",
[2025-06-06 12:34:19]     "pilotErrorCode": 0,
[2025-06-06 12:34:19]     "pilotErrorDiag": "",
[2025-06-06 12:34:19]  *** Listing of results directory ***
[2025-06-06 12:34:19] total 417208
[2025-06-06 12:34:19] -rw-r--r--. 1 boinc boinc    495897 May 29 13:24 pilot3.tar.gz
[2025-06-06 12:34:19] -rw-r--r--. 1 boinc boinc      5111 May 29 13:48 queuedata.json
[2025-06-06 12:34:19] -rwx------. 1 boinc boinc     37140 May 29 13:50 runpilot2-wrapper.sh
[2025-06-06 12:34:19] -rw-r--r--. 1 boinc boinc       100 Jun  6 06:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 12:34:19] -rwxr-xr-x. 1 boinc boinc      7986 Jun  6 06:55 run_atlas
[2025-06-06 12:34:19] -rw-r--r--. 1 boinc boinc       105 Jun  6 06:55 job.xml
[2025-06-06 12:34:19] -rw-r--r--. 1 boinc boinc      6392 Jun  6 06:55 init_data.xml
[2025-06-06 12:34:19] -rw-r--r--. 2 boinc boinc 223077031 Jun  6 06:55 EVNT.44871834._001596.pool.root.1
[2025-06-06 12:34:19] -rw-r--r--. 2 boinc boinc     15093 Jun  6 06:55 start_atlas.sh
[2025-06-06 12:34:19] drwxrwx--x. 2 boinc boinc        68 Jun  6 06:55 shared
[2025-06-06 12:34:19] -rw-r--r--. 2 boinc boinc    508885 Jun  6 06:55 input.tar.gz
[2025-06-06 12:34:19] -rw-r--r--. 1 boinc boinc         0 Jun  6 06:55 boinc_lockfile
[2025-06-06 12:34:19] -rw-r--r--. 1 boinc boinc      2559 Jun  6 06:57 pandaJob.out
[2025-06-06 12:34:19] -rw-------. 1 boinc boinc    988125 Jun  6 07:00 agis_schedconf.cvmfs.json
[2025-06-06 12:34:19] drwx------. 4 boinc boinc      4096 Jun  6 07:00 pilot3
[2025-06-06 12:34:19] -rw-------. 1 boinc boinc 196160604 Jun  6 12:19 HITS.44871837._099770.pool.root.1
[2025-06-06 12:34:19] -rw-r--r--. 1 boinc boinc       531 Jun  6 12:19 boinc_task_state.xml
[2025-06-06 12:34:19] -rw-------. 1 boinc boinc      1018 Jun  6 12:20 memory_monitor_summary.json
[2025-06-06 12:34:19] -rw-------. 1 boinc boinc   1598969 Jun  6 12:20 agis_ddmendpoints.agis.ALL.json
[2025-06-06 12:34:19] -rw-------. 1 boinc boinc    439282 Jun  6 12:20 log.44871837._099770.job.log.tgz.1
[2025-06-06 12:34:19] -rw-------. 1 boinc boinc        95 Jun  6 12:21 pilot_heartbeat.json
[2025-06-06 12:34:19] -rw-------. 1 boinc boinc      7690 Jun  6 12:22 heartbeat.json
[2025-06-06 12:34:19] -rw-------. 1 boinc boinc      4603 Jun  6 12:22 pilotlog.txt
[2025-06-06 12:34:19] -rw-------. 1 boinc boinc   1636074 Jun  6 12:22 log.44871837._099770.job.log.1
[2025-06-06 12:34:19] -rw-------. 1 boinc boinc       357 Jun  6 12:22 output.list
[2025-06-06 12:34:19] -rw-r--r--. 1 boinc boinc       620 Jun  6 12:22 runtime_log
[2025-06-06 12:34:19] -rw-------. 1 boinc boinc   2099200 Jun  6 12:22 result.tar.gz
[2025-06-06 12:34:19] -rw-r--r--. 1 boinc boinc      8673 Jun  6 12:22 runtime_log.err
[2025-06-06 12:34:19] -rw-------. 1 boinc boinc       657 Jun  6 12:22 7G2MDmBxqe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmw9UKDm1R15Ym.diag
[2025-06-06 12:34:19] -rw-r--r--. 1 boinc boinc      8192 Jun  6 12:34 boinc_mmap_file
[2025-06-06 12:34:19] -rw-r--r--. 1 boinc boinc        28 Jun  6 12:34 wrapper_checkpoint.txt
[2025-06-06 12:34:19] -rw-r--r--. 1 boinc boinc     20825 Jun  6 12:34 stderr.txt
[2025-06-06 12:34:19] HITS file was successfully produced:
[2025-06-06 12:34:19] -rw-------. 1 boinc boinc 196160604 Jun  6 12:19 shared/HITS.pool.root.1
[2025-06-06 12:34:19]  *** Contents of shared directory: ***
[2025-06-06 12:34:19] total 411984
[2025-06-06 12:34:19] -rw-r--r--. 2 boinc boinc 223077031 Jun  6 06:55 ATLAS.root_0
[2025-06-06 12:34:19] -rw-r--r--. 2 boinc boinc     15093 Jun  6 06:55 start_atlas.sh
[2025-06-06 12:34:19] -rw-r--r--. 2 boinc boinc    508885 Jun  6 06:55 input.tar.gz
[2025-06-06 12:34:19] -rw-------. 1 boinc boinc 196160604 Jun  6 12:19 HITS.pool.root.1
[2025-06-06 12:34:19] -rw-------. 1 boinc boinc   2099200 Jun  6 12:22 result.tar.gz
12:34:21 (27156): run_atlas exited; CPU time 71090.267419
12:34:21 (27156): called boinc_finish(0)

</stderr_txt>
]]>

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