Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:53:36 (865321): wrapper (7.7.26015): starting
00:53:36 (865321): wrapper: running run_atlas (--nthreads 10)
[2025-06-06 00:53:36] Arguments: --nthreads 10
[2025-06-06 00:53:36] Threads: 10
[2025-06-06 00:53:36] Checking for CVMFS
[2025-06-06 00:53:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 00:53:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 00:53:36] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 00:53:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 00:53:36] 2.12.6.0 6643 3762 280268 146843 3 400 32179341 32935937 20548 16776704 0 28841341 99.678 21665652 24555 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-06 00:53:36] CVMFS is ok
[2025-06-06 00:53:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 00:53:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 00:53:36] Further information can be found at the LHC@home message board.
[2025-06-06 00:53:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 00:53:36] Checking for apptainer binary...
[2025-06-06 00:53:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 00:53:36] Running /usr/bin/apptainer --version
[2025-06-06 00:53:36] apptainer version 1.4.1-1.el9
[2025-06-06 00:53:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 00:53:36] c-3-40.aglt2.org
[2025-06-06 00:53:36] apptainer works
[2025-06-06 00:53:36] Set ATHENA_PROC_NUMBER=10
[2025-06-06 00:53:36] Set ATHENA_CORE_NUMBER=10
[2025-06-06 00:53:36] Starting ATLAS job with PandaID=6669624158
[2025-06-06 00:53:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 02:24:43]  *** The last 200 lines of the pilot log: ***
[2025-06-06 02:24:43]  filetype=log
[2025-06-06 02:24:43]  guid=24923a75-6457-4891-8fb4-dedd811839d0
[2025-06-06 02:24:43]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-06 02:24:43]  is_altstaged=None
[2025-06-06 02:24:43]  is_tar=False
[2025-06-06 02:24:43]  lfn=log.44871837._097994.job.log.tgz.1
[2025-06-06 02:24:43]  mtime=0
[2025-06-06 02:24:43]  protocol_id=None
[2025-06-06 02:24:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 02:24:43]  replicas=None
[2025-06-06 02:24:43]  scope=mc23_13p6TeV
[2025-06-06 02:24:43]  status=None
[2025-06-06 02:24:43]  status_code=0
[2025-06-06 02:24:43]  storage_token=
[2025-06-06 02:24:43]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6669624158/log.44871837._097994.job.log.tgz.1
[2025-06-06 02:24:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d6/b3/log.44871837._097994.job.log.tgz.1
[2025-06-06 02:24:43]  workdir=None
[2025-06-06 02:24:43] ]
[2025-06-06 02:24:43] 2025-06-06 06:24:18,272 | INFO     | transferring file log.44871837._097994.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6669624158/log.44871837._097994.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-06 02:24:43] 2025-06-06 06:24:18,273 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6669624158/log.44871837._097994.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._097994.job
[2025-06-06 02:24:43] 2025-06-06 06:24:18,291 | INFO     | adding to output.list: log.44871837._097994.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d6/b3/log.44871837._097994.job.log.tg
[2025-06-06 02:24:43] 2025-06-06 06:24:18,292 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 02:24:43] 2025-06-06 06:24:18,292 | INFO     | summary of transferred files:
[2025-06-06 02:24:43] 2025-06-06 06:24:18,292 | INFO     |  -- lfn=log.44871837._097994.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 02:24:43] 2025-06-06 06:24:18,292 | INFO     | stage-out finished correctly
[2025-06-06 02:24:43] 2025-06-06 06:24:18,730 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 02:24:43] 2025-06-06 06:24:20,337 | INFO     | job 6669624158 has state=finished
[2025-06-06 02:24:43] 2025-06-06 06:24:20,337 | INFO     | preparing for final server update for job 6669624158 in state='finished'
[2025-06-06 02:24:43] 2025-06-06 06:24:20,338 | INFO     | this job has now completed (state=finished)
[2025-06-06 02:24:43] 2025-06-06 06:24:20,338 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 02:24:43] 2025-06-06 06:24:20,338 | INFO     | log transfer has been attempted: DONE
[2025-06-06 02:24:43] 2025-06-06 06:24:20,338 | INFO     | job 6669624158 has finished - writing final server update
[2025-06-06 02:24:43] 2025-06-06 06:24:20,339 | INFO     | total number of processed events: 400 (read)
[2025-06-06 02:24:43] 2025-06-06 06:24:20,355 | INFO     | executing command: lscpu
[2025-06-06 02:24:43] 2025-06-06 06:24:20,429 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 02:24:43] 2025-06-06 06:24:20,444 | INFO     | monitor loop #395: job 0:6669624158 is in state 'finished'
[2025-06-06 02:24:43] 2025-06-06 06:24:20,444 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 02:24:43] 2025-06-06 06:24:22,946 | INFO     | monitor loop #396: job 0:6669624158 is in state 'finished'
[2025-06-06 02:24:43] 2025-06-06 06:24:22,947 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 02:24:43] 2025-06-06 06:24:24,151 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-06 02:24:43] 2025-06-06 06:24:24,151 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6669624158/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 02:24:43] 2025-06-06 06:24:24,152 | INFO     | extracted standard info from prmon json
[2025-06-06 02:24:43] 2025-06-06 06:24:24,152 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 02:24:43] 2025-06-06 06:24:24,152 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 02:24:43] 2025-06-06 06:24:24,152 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 02:24:43] 2025-06-06 06:24:24,152 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 02:24:43] 2025-06-06 06:24:24,154 | INFO     | fitting pss+swap vs Time
[2025-06-06 02:24:43] 2025-06-06 06:24:24,155 | INFO     | sum of square deviations: 170944600.5
[2025-06-06 02:24:43] 2025-06-06 06:24:24,155 | INFO     | sum of deviations: -4435373775.5
[2025-06-06 02:24:43] 2025-06-06 06:24:24,155 | INFO     | mean x: 1749188430.5
[2025-06-06 02:24:43] 2025-06-06 06:24:24,155 | INFO     | mean y: 2327298.1097560977
[2025-06-06 02:24:43] 2025-06-06 06:24:24,155 | INFO     | -- intersect: 45387232526.7935
[2025-06-06 02:24:43] 2025-06-06 06:24:24,155 | INFO     | intersect: 45387232526.7935
[2025-06-06 02:24:43] 2025-06-06 06:24:24,155 | INFO     | chi2: 0.10346803955976068
[2025-06-06 02:24:43] 2025-06-06 06:24:24,156 | INFO     | -- intersect: 45387232526.7935
[2025-06-06 02:24:43] 2025-06-06 06:24:24,156 | INFO     | current memory leak: -25.95 B/s (using 82 data points, chi2=0.10)
[2025-06-06 02:24:43] 2025-06-06 06:24:24,156 | INFO     | ..............................
[2025-06-06 02:24:43] 2025-06-06 06:24:24,156 | INFO     | . Timing measurements:
[2025-06-06 02:24:43] 2025-06-06 06:24:24,156 | INFO     | . get job = 0 s
[2025-06-06 02:24:43] 2025-06-06 06:24:24,156 | INFO     | . initial setup = 3 s
[2025-06-06 02:24:43] 2025-06-06 06:24:24,156 | INFO     | . payload setup = 8 s
[2025-06-06 02:24:43] 2025-06-06 06:24:24,156 | INFO     | . stage-in = 0 s
[2025-06-06 02:24:43] 2025-06-06 06:24:24,156 | INFO     | . payload execution = 5399 s
[2025-06-06 02:24:43] 2025-06-06 06:24:24,156 | INFO     | . stage-out = 3 s
[2025-06-06 02:24:43] 2025-06-06 06:24:24,157 | INFO     | . log creation = 0 s
[2025-06-06 02:24:43] 2025-06-06 06:24:24,157 | INFO     | ..............................
[2025-06-06 02:24:43] 2025-06-06 06:24:24,242 | INFO     | 
[2025-06-06 02:24:43] 2025-06-06 06:24:24,242 | INFO     | job summary report
[2025-06-06 02:24:43] 2025-06-06 06:24:24,242 | INFO     | --------------------------------------------------
[2025-06-06 02:24:43] 2025-06-06 06:24:24,242 | INFO     | PanDA job id: 6669624158
[2025-06-06 02:24:43] 2025-06-06 06:24:24,242 | INFO     | task id: 44871837
[2025-06-06 02:24:43] 2025-06-06 06:24:24,242 | INFO     | errors: (none)
[2025-06-06 02:24:43] 2025-06-06 06:24:24,243 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 02:24:43] 2025-06-06 06:24:24,243 | INFO     | pilot state: finished 
[2025-06-06 02:24:43] 2025-06-06 06:24:24,243 | INFO     | transexitcode: 0
[2025-06-06 02:24:43] 2025-06-06 06:24:24,244 | INFO     | exeerrorcode: 0
[2025-06-06 02:24:43] 2025-06-06 06:24:24,244 | INFO     | exeerrordiag: 
[2025-06-06 02:24:43] 2025-06-06 06:24:24,244 | INFO     | exitcode: 0
[2025-06-06 02:24:43] 2025-06-06 06:24:24,244 | INFO     | exitmsg: OK
[2025-06-06 02:24:43] 2025-06-06 06:24:24,244 | INFO     | cpuconsumptiontime: 48959 s
[2025-06-06 02:24:43] 2025-06-06 06:24:24,244 | INFO     | nevents: 400
[2025-06-06 02:24:43] 2025-06-06 06:24:24,244 | INFO     | neventsw: 0
[2025-06-06 02:24:43] 2025-06-06 06:24:24,244 | INFO     | pid: 890633
[2025-06-06 02:24:43] 2025-06-06 06:24:24,244 | INFO     | pgrp: 890633
[2025-06-06 02:24:43] 2025-06-06 06:24:24,244 | INFO     | corecount: 10
[2025-06-06 02:24:43] 2025-06-06 06:24:24,244 | INFO     | event service: False
[2025-06-06 02:24:43] 2025-06-06 06:24:24,244 | INFO     | sizes: {0: 2397392, 4: 2397598, 11: 2397626, 5410: 2423922, 5415: 2433089, 5420: 2433033}
[2025-06-06 02:24:43] 2025-06-06 06:24:24,244 | INFO     | --------------------------------------------------
[2025-06-06 02:24:43] 2025-06-06 06:24:24,244 | INFO     | 
[2025-06-06 02:24:43] 2025-06-06 06:24:24,244 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 02:24:43] 2025-06-06 06:24:24,262 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 02:24:43] 2025-06-06 06:24:24,262 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 02:24:43] 2025-06-06 06:24:24,262 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 02:24:43] 2025-06-06 06:24:24,262 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 02:24:43] 2025-06-06 06:24:24,262 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 02:24:43] 2025-06-06 06:24:24,263 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 02:24:43] 2025-06-06 06:24:24,263 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 02:24:43] 2025-06-06 06:24:24,263 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 02:24:43] 2025-06-06 06:24:24,263 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 02:24:43] 2025-06-06 06:24:24,263 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 02:24:43] 2025-06-06 06:24:24,263 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 02:24:43] 2025-06-06 06:24:24,263 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 02:24:43] 2025-06-06 06:24:24,263 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 02:24:43] 2025-06-06 06:24:24,263 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 02:24:43] 2025-06-06 06:24:24,263 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 02:24:43] 2025-06-06 06:24:24,263 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 02:24:43] 2025-06-06 06:24:24,263 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 02:24:43] 2025-06-06 06:24:24,263 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 02:24:43] 2025-06-06 06:24:24,263 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 02:24:43] 2025-06-06 06:24:24,264 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 02:24:43] 2025-06-06 06:24:24,264 | INFO     | job 6669624158 has completed (purged errors)
[2025-06-06 02:24:43] 2025-06-06 06:24:24,264 | INFO     | overall cleanup function is called
[2025-06-06 02:24:43] 2025-06-06 06:24:25,271 | INFO     | --- collectZombieJob: --- 10, [890633]
[2025-06-06 02:24:43] 2025-06-06 06:24:25,272 | INFO     | zombie collector waiting for pid 890633
[2025-06-06 02:24:43] 2025-06-06 06:24:25,272 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 02:24:43] 2025-06-06 06:24:25,272 | INFO     | collected zombie processes
[2025-06-06 02:24:43] 2025-06-06 06:24:25,272 | INFO     | will attempt to kill all subprocesses of pid=890633
[2025-06-06 02:24:43] 2025-06-06 06:24:25,683 | INFO     | process IDs to be killed: [890633] (in reverse order)
[2025-06-06 02:24:43] 2025-06-06 06:24:25,808 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 02:24:43] 2025-06-06 06:24:25,808 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 02:24:43] 2025-06-06 06:24:25,824 | INFO     | did not find any defunct processes belonging to 890633
[2025-06-06 02:24:43] 2025-06-06 06:24:25,840 | INFO     | did not find any defunct processes belonging to 890633
[2025-06-06 02:24:43] 2025-06-06 06:24:25,841 | INFO     | ready for new job
[2025-06-06 02:24:43] 2025-06-06 06:24:25,841 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 02:24:43] 2025-06-06 06:24:25,842 | INFO     | **************************************
[2025-06-06 02:24:43] 2025-06-06 06:24:25,842 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 02:24:43] 2025-06-06 06:24:25,842 | INFO     | **************************************
[2025-06-06 02:24:43] 2025-06-06 06:24:25,843 | INFO     | 
[2025-06-06 02:24:43] 2025-06-06 06:24:25,858 | INFO     | architecture information:
[2025-06-06 02:24:43] 2025-06-06 06:24:25,859 | INFO     | executing command: cat /etc/os-release
[2025-06-06 02:24:43] 2025-06-06 06:24:25,874 | INFO     | cat /etc/os-release:
[2025-06-06 02:24:43] NAME="CentOS Linux"
[2025-06-06 02:24:43] VERSION="7 (Core)"
[2025-06-06 02:24:43] ID="centos"
[2025-06-06 02:24:43] ID_LIKE="rhel fedora"
[2025-06-06 02:24:43] VERSION_ID="7"
[2025-06-06 02:24:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 02:24:43] ANSI_COLOR="0;31"
[2025-06-06 02:24:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 02:24:43] HOME_URL="https://www.centos.org/"
[2025-06-06 02:24:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 02:24:43] 
[2025-06-06 02:24:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 02:24:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 02:24:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 02:24:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 02:24:43] 
[2025-06-06 02:24:43] 2025-06-06 06:24:25,874 | INFO     | **************************************
[2025-06-06 02:24:43] 2025-06-06 06:24:26,377 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 02:24:43] 2025-06-06 06:24:26,392 | INFO     | sufficient remaining disk space (76126617600 B)
[2025-06-06 02:24:43] 2025-06-06 06:24:26,392 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 02:24:43] 2025-06-06 06:24:26,393 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 02:24:43] 2025-06-06 06:24:26,393 | INFO     | update_server=False
[2025-06-06 02:24:43] 2025-06-06 06:24:26,393 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 02:24:43] 2025-06-06 06:24:26,393 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 02:24:43] 2025-06-06 06:24:26,394 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 02:24:43] 2025-06-06 06:24:26,394 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 02:24:43] 2025-06-06 06:24:26,394 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 02:24:43] 2025-06-06 06:24:26,399 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 02:24:43] 2025-06-06 06:24:26,454 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 02:24:43] 2025-06-06 06:24:26,455 | INFO     | aborting loop
[2025-06-06 02:24:43] 2025-06-06 06:24:26,496 | INFO     | all data control threads have been joined
[2025-06-06 02:24:43] 2025-06-06 06:24:27,398 | INFO     | [job] retrieve thread has finished
[2025-06-06 02:24:43] 2025-06-06 06:24:27,460 | INFO     | [job] job monitor thread has finished
[2025-06-06 02:24:43] 2025-06-06 06:24:27,502 | INFO     | [data] control thread has finished
[2025-06-06 02:24:43] 2025-06-06 06:24:27,529 | INFO     | all payload control threads have been joined
[2025-06-06 02:24:43] 2025-06-06 06:24:27,589 | INFO     | all job control threads have been joined
[2025-06-06 02:24:43] 2025-06-06 06:24:27,763 | INFO     | [data] copytool_in thread has finished
[2025-06-06 02:24:43] 2025-06-06 06:24:27,779 | INFO     | [job] validate thread has finished
[2025-06-06 02:24:43] 2025-06-06 06:24:27,929 | INFO     | [payload] validate_post thread has finished
[2025-06-06 02:24:43] 2025-06-06 06:24:28,044 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 02:24:43] 2025-06-06 06:24:28,313 | INFO     | [payload] failed_post thread has finished
[2025-06-06 02:24:43] 2025-06-06 06:24:28,405 | INFO     | [data] copytool_out thread has finished
[2025-06-06 02:24:43] 2025-06-06 06:24:28,474 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 02:24:43] 2025-06-06 06:24:28,534 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 02:24:43] 2025-06-06 06:24:28,535 | INFO     | [payload] control thread has finished
[2025-06-06 02:24:43] 2025-06-06 06:24:28,591 | INFO     | [job] control thread has finished
[2025-06-06 02:24:43] 2025-06-06 06:24:29,251 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 02:24:43] 2025-06-06 06:24:29,336 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 02:24:43] 2025-06-06 06:24:30,256 | INFO     | [job] queue monitor thread has finished
[2025-06-06 02:24:43] 2025-06-06 06:24:33,342 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 02:24:43] 2025-06-06 06:24:36,904 | INFO     | job.realtimelogging is not enabled
[2025-06-06 02:24:43] 2025-06-06 06:24:37,909 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 02:24:43] 2025-06-06 06:24:38,027 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140523151619904)>', '<ExcThread(monitor, started 140522513483520)>']
[2025-06-06 02:24:43] 2025-06-06 06:24:38,454 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 02:24:43] 2025-06-06 06:24:38,454 | INFO     | [monitor] control thread has ended
[2025-06-06 02:24:43] 2025-06-06 06:24:43,051 | INFO     | all workflow threads have been joined
[2025-06-06 02:24:43] 2025-06-06 06:24:43,052 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 02:24:43] 2025-06-06 06:24:43,052 | INFO     | traces error code: 0
[2025-06-06 02:24:43] 2025-06-06 06:24:43,052 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 02:24:43] 2025-06-06 06:24:43,232 [wrapper] ==== pilot stdout END ====
[2025-06-06 02:24:43] 2025-06-06 06:24:43,234 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 02:24:43] 2025-06-06 06:24:43,237 [wrapper] pilotpid: 870201
[2025-06-06 02:24:43] 2025-06-06 06:24:43,239 [wrapper] Pilot exit status: 0
[2025-06-06 02:24:43] 2025-06-06 06:24:43,249 [wrapper] pandaids: 6669624158
[2025-06-06 02:24:43] 2025-06-06 06:24:43,369 [wrapper] cleanup supervisor_pilot 1783577 870202
[2025-06-06 02:24:43] 2025-06-06 06:24:43,372 [wrapper] Test setup, not cleaning
[2025-06-06 02:24:43] 2025-06-06 06:24:43,375 [wrapper] apfmon messages muted
[2025-06-06 02:24:43] 2025-06-06 06:24:43,377 [wrapper] ==== wrapper stdout END ====
[2025-06-06 02:24:43] 2025-06-06 06:24:43,379 [wrapper] ==== wrapper stderr END ====
[2025-06-06 02:24:43]  *** Error codes and diagnostics ***
[2025-06-06 02:24:43]     "exeErrorCode": 0,
[2025-06-06 02:24:43]     "exeErrorDiag": "",
[2025-06-06 02:24:43]     "pilotErrorCode": 0,
[2025-06-06 02:24:43]     "pilotErrorDiag": "",
[2025-06-06 02:24:43]  *** Listing of results directory ***
[2025-06-06 02:24:43] total 418944
[2025-06-06 02:24:43] -rw-r--r--. 1 boincer umatlas      5111 May 29 05:08 queuedata.json
[2025-06-06 02:24:43] -rw-r--r--. 1 boincer umatlas    495897 May 29 05:08 pilot3.tar.gz
[2025-06-06 02:24:43] -rwx------. 1 boincer umatlas     37140 May 29 05:09 runpilot2-wrapper.sh
[2025-06-06 02:24:43] -rw-r--r--. 1 boincer umatlas       100 Jun  6 00:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 02:24:43] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  6 00:53 run_atlas
[2025-06-06 02:24:43] -rw-r--r--. 1 boincer umatlas       105 Jun  6 00:53 job.xml
[2025-06-06 02:24:43] -rw-r--r--. 2 boincer umatlas 220293576 Jun  6 00:53 EVNT.44871834._003725.pool.root.1
[2025-06-06 02:24:43] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 00:53 start_atlas.sh
[2025-06-06 02:24:43] drwxrwx--x. 2 boincer umatlas      4096 Jun  6 00:53 shared
[2025-06-06 02:24:43] -rw-r--r--. 2 boincer umatlas    508876 Jun  6 00:53 input.tar.gz
[2025-06-06 02:24:43] -rw-r--r--. 1 boincer umatlas         0 Jun  6 00:53 boinc_lockfile
[2025-06-06 02:24:43] -rw-r--r--. 1 boincer umatlas      2559 Jun  6 00:53 pandaJob.out
[2025-06-06 02:24:43] -rw-------. 1 boincer umatlas    988125 Jun  6 00:53 agis_schedconf.cvmfs.json
[2025-06-06 02:24:43] -rw-------. 1 boincer umatlas   1598969 Jun  6 00:53 agis_ddmendpoints.agis.ALL.json
[2025-06-06 02:24:43] drwx------. 4 boincer umatlas      4096 Jun  6 00:53 pilot3
[2025-06-06 02:24:43] -rw-r--r--. 1 boincer umatlas      6839 Jun  6 02:22 init_data.xml
[2025-06-06 02:24:43] -rw-------. 1 boincer umatlas        95 Jun  6 02:23 pilot_heartbeat.json
[2025-06-06 02:24:43] -rw-------. 1 boincer umatlas 203121500 Jun  6 02:23 HITS.44871837._097994.pool.root.1
[2025-06-06 02:24:43] -rw-r--r--. 1 boincer umatlas       530 Jun  6 02:23 boinc_task_state.xml
[2025-06-06 02:24:43] -rw-------. 1 boincer umatlas      1040 Jun  6 02:24 memory_monitor_summary.json
[2025-06-06 02:24:43] -rw-------. 1 boincer umatlas    351433 Jun  6 02:24 log.44871837._097994.job.log.tgz.1
[2025-06-06 02:24:43] -rw-------. 1 boincer umatlas      7713 Jun  6 02:24 heartbeat.json
[2025-06-06 02:24:43] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 02:24 boinc_mmap_file
[2025-06-06 02:24:43] -rw-r--r--. 1 boincer umatlas        27 Jun  6 02:24 wrapper_checkpoint.txt
[2025-06-06 02:24:43] -rw-------. 1 boincer umatlas      4548 Jun  6 02:24 pilotlog.txt
[2025-06-06 02:24:43] -rw-------. 1 boincer umatlas    522989 Jun  6 02:24 log.44871837._097994.job.log.1
[2025-06-06 02:24:43] -rw-------. 1 boincer umatlas       357 Jun  6 02:24 output.list
[2025-06-06 02:24:43] -rw-r--r--. 1 boincer umatlas       620 Jun  6 02:24 runtime_log
[2025-06-06 02:24:43] -rw-------. 1 boincer umatlas    890880 Jun  6 02:24 result.tar.gz
[2025-06-06 02:24:43] -rw-r--r--. 1 boincer umatlas      8651 Jun  6 02:24 runtime_log.err
[2025-06-06 02:24:43] -rw-------. 1 boincer umatlas       651 Jun  6 02:24 mgXLDmgRoe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmCyUKDm9Y73dn.diag
[2025-06-06 02:24:43] -rw-r--r--. 1 boincer umatlas     21175 Jun  6 02:24 stderr.txt
[2025-06-06 02:24:43] HITS file was successfully produced:
[2025-06-06 02:24:43] -rw-------. 1 boincer umatlas 203121500 Jun  6 02:23 shared/HITS.pool.root.1
[2025-06-06 02:24:43]  *** Contents of shared directory: ***
[2025-06-06 02:24:43] total 414892
[2025-06-06 02:24:43] -rw-r--r--. 2 boincer umatlas 220293576 Jun  6 00:53 ATLAS.root_0
[2025-06-06 02:24:43] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 00:53 start_atlas.sh
[2025-06-06 02:24:43] -rw-r--r--. 2 boincer umatlas    508876 Jun  6 00:53 input.tar.gz
[2025-06-06 02:24:43] -rw-------. 1 boincer umatlas 203121500 Jun  6 02:23 HITS.pool.root.1
[2025-06-06 02:24:43] -rw-------. 1 boincer umatlas    890880 Jun  6 02:24 result.tar.gz
02:24:45 (865321): run_atlas exited; CPU time 49202.984153
02:24:45 (865321): called boinc_finish(0)

</stderr_txt>
]]>

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