Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
11:53:36 (1613170): wrapper (7.7.26015): starting
11:53:36 (1613170): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 11:53:36] Arguments: --nthreads 12
[2025-06-06 11:53:36] Threads: 12
[2025-06-06 11:53:36] Checking for CVMFS
[2025-06-06 11:53:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 11:53:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 11:53:38] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 11:53:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 11:53:39] 2.12.7.0 16016 4587 63008 146855 0 56 2970211 4096001 912 130560 0 4312027 99.992 1104919 142 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-06 11:53:39] CVMFS is ok
[2025-06-06 11:53:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 11:53:39] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-06 11:53:39] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-06 11:53:39] Further information can be found at the LHC@home message board.
[2025-06-06 11:53:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 11:53:39] Checking for apptainer binary...
[2025-06-06 11:53:39] apptainer is not installed, using version from CVMFS
[2025-06-06 11:53:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 11:53:40] g3250
[2025-06-06 11:53:40] apptainer works
[2025-06-06 11:53:41] Set ATHENA_PROC_NUMBER=12
[2025-06-06 11:53:41] Set ATHENA_CORE_NUMBER=12
[2025-06-06 11:53:41] Starting ATLAS job with PandaID=6668947183
[2025-06-06 11:53:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 16:26:25]  *** The last 200 lines of the pilot log: ***
[2025-06-06 16:26:25] 2025-06-06 16:26:00,882 | INFO     | monitor loop #1169: job 0:6668947183 is in state 'finished'
[2025-06-06 16:26:25] 2025-06-06 16:26:00,883 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 16:26:25] 2025-06-06 16:26:01,875 | INFO     | PID=1616780 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-06 16:26:25] 2025-06-06 16:26:01,875 | INFO     | .. there are 2 such processes running
[2025-06-06 16:26:25] 2025-06-06 16:26:03,393 | INFO     | monitor loop #1170: job 0:6668947183 is in state 'finished'
[2025-06-06 16:26:25] 2025-06-06 16:26:03,393 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 16:26:25] 2025-06-06 16:26:03,455 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 16:26:25] 2025-06-06 16:26:03,455 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6668947183/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 16:26:25] 2025-06-06 16:26:03,455 | INFO     | extracted standard info from prmon json
[2025-06-06 16:26:25] 2025-06-06 16:26:03,455 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 16:26:25] 2025-06-06 16:26:03,456 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 16:26:25] 2025-06-06 16:26:03,456 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 16:26:25] 2025-06-06 16:26:03,456 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 16:26:25] 2025-06-06 16:26:03,460 | INFO     | fitting pss+swap vs Time
[2025-06-06 16:26:25] 2025-06-06 16:26:03,461 | INFO     | sum of square deviations: 5640782972.0
[2025-06-06 16:26:25] 2025-06-06 16:26:03,470 | INFO     | sum of deviations: 2110102971.9999878
[2025-06-06 16:26:25] 2025-06-06 16:26:03,471 | INFO     | mean x: 1749219043.0
[2025-06-06 16:26:25] 2025-06-06 16:26:03,471 | INFO     | mean y: 2719171.403041825
[2025-06-06 16:26:25] 2025-06-06 16:26:03,471 | INFO     | -- intersect: -651628340.2163565
[2025-06-06 16:26:25] 2025-06-06 16:26:03,471 | INFO     | intersect: -651628340.2163565
[2025-06-06 16:26:25] 2025-06-06 16:26:03,471 | INFO     | chi2: 2.7211717993951825
[2025-06-06 16:26:25] 2025-06-06 16:26:03,472 | INFO     | sum of square deviations: 5325139844.5
[2025-06-06 16:26:25] 2025-06-06 16:26:03,473 | INFO     | sum of deviations: 1891210876.9999855
[2025-06-06 16:26:25] 2025-06-06 16:26:03,474 | INFO     | mean x: 1749218890.5
[2025-06-06 16:26:25] 2025-06-06 16:26:03,474 | INFO     | mean y: 2719069.96124031
[2025-06-06 16:26:25] 2025-06-06 16:26:03,474 | INFO     | -- intersect: -618511900.2233676
[2025-06-06 16:26:25] 2025-06-06 16:26:03,474 | INFO     | intersect: -618511900.2233676
[2025-06-06 16:26:25] 2025-06-06 16:26:03,474 | INFO     | chi2: 2.720395627126477
[2025-06-06 16:26:25] 2025-06-06 16:26:03,479 | INFO     | current chi2=2.720395627126477 (change=0.02852345702238086 %)
[2025-06-06 16:26:25] 2025-06-06 16:26:03,479 | INFO     | right removable region: 257
[2025-06-06 16:26:25] 2025-06-06 16:26:03,479 | INFO     | sum of square deviations: 5325139844.5
[2025-06-06 16:26:25] 2025-06-06 16:26:03,481 | INFO     | sum of deviations: -61563146693.0
[2025-06-06 16:26:25] 2025-06-06 16:26:03,481 | INFO     | mean x: 1749219195.5
[2025-06-06 16:26:25] 2025-06-06 16:26:03,481 | INFO     | mean y: 2749778.434108527
[2025-06-06 16:26:25] 2025-06-06 16:26:03,481 | INFO     | -- intersect: 20225211737.250362
[2025-06-06 16:26:25] 2025-06-06 16:26:03,481 | INFO     | intersect: 20225211737.250362
[2025-06-06 16:26:25] 2025-06-06 16:26:03,481 | INFO     | chi2: 0.4649956366792415
[2025-06-06 16:26:25] 2025-06-06 16:26:03,482 | INFO     | current chi2=0.4649956366792415 (change=82.9119338667778 %)
[2025-06-06 16:26:25] 2025-06-06 16:26:03,482 | INFO     | sum of square deviations: 5021496942.0
[2025-06-06 16:26:25] 2025-06-06 16:26:03,488 | INFO     | sum of deviations: -72708798963.99991
[2025-06-06 16:26:25] 2025-06-06 16:26:03,488 | INFO     | mean x: 1749219348.0
[2025-06-06 16:26:25] 2025-06-06 16:26:03,488 | INFO     | mean y: 2755353.023715415
[2025-06-06 16:26:25] 2025-06-06 16:26:03,488 | INFO     | -- intersect: 25330588743.481846
[2025-06-06 16:26:25] 2025-06-06 16:26:03,488 | INFO     | intersect: 25330588743.481846
[2025-06-06 16:26:25] 2025-06-06 16:26:03,488 | INFO     | chi2: 0.35893352534532075
[2025-06-06 16:26:25] 2025-06-06 16:26:03,489 | INFO     | current chi2=0.35893352534532075 (change=22.8092702312997 %)
[2025-06-06 16:26:25] 2025-06-06 16:26:03,489 | INFO     | left removable region: 20
[2025-06-06 16:26:25] 2025-06-06 16:26:03,489 | INFO     | sum of square deviations: 4127772278.0
[2025-06-06 16:26:25] 2025-06-06 16:26:03,495 | INFO     | sum of deviations: -61740434409.0
[2025-06-06 16:26:25] 2025-06-06 16:26:03,495 | INFO     | mean x: 1749219470.0
[2025-06-06 16:26:25] 2025-06-06 16:26:03,495 | INFO     | mean y: 2750708.3080168776
[2025-06-06 16:26:25] 2025-06-06 16:26:03,495 | INFO     | -- intersect: 26166396055.237873
[2025-06-06 16:26:25] 2025-06-06 16:26:03,495 | INFO     | intersect: 26166396055.237873
[2025-06-06 16:26:25] 2025-06-06 16:26:03,495 | INFO     | chi2: 0.29951472618762137
[2025-06-06 16:26:25] 2025-06-06 16:26:03,496 | INFO     | -- intersect: 26166396055.237873
[2025-06-06 16:26:25] 2025-06-06 16:26:03,496 | INFO     | current memory leak: -14.96 B/s (using 237 data points, chi2=0.30)
[2025-06-06 16:26:25] 2025-06-06 16:26:03,496 | INFO     | ..............................
[2025-06-06 16:26:25] 2025-06-06 16:26:03,496 | INFO     | . Timing measurements:
[2025-06-06 16:26:25] 2025-06-06 16:26:03,496 | INFO     | . get job = 0 s
[2025-06-06 16:26:25] 2025-06-06 16:26:03,496 | INFO     | . initial setup = 5 s
[2025-06-06 16:26:25] 2025-06-06 16:26:03,497 | INFO     | . payload setup = 55 s
[2025-06-06 16:26:25] 2025-06-06 16:26:03,497 | INFO     | . stage-in = 0 s
[2025-06-06 16:26:25] 2025-06-06 16:26:03,497 | INFO     | . payload execution = 16070 s
[2025-06-06 16:26:25] 2025-06-06 16:26:03,497 | INFO     | . stage-out = 1 s
[2025-06-06 16:26:25] 2025-06-06 16:26:03,497 | INFO     | . log creation = 0 s
[2025-06-06 16:26:25] 2025-06-06 16:26:03,497 | INFO     | ..............................
[2025-06-06 16:26:25] 2025-06-06 16:26:03,942 | INFO     | 
[2025-06-06 16:26:25] 2025-06-06 16:26:03,943 | INFO     | job summary report
[2025-06-06 16:26:25] 2025-06-06 16:26:03,946 | INFO     | --------------------------------------------------
[2025-06-06 16:26:25] 2025-06-06 16:26:03,947 | INFO     | PanDA job id: 6668947183
[2025-06-06 16:26:25] 2025-06-06 16:26:03,947 | INFO     | task id: 44871837
[2025-06-06 16:26:25] 2025-06-06 16:26:03,947 | INFO     | errors: (none)
[2025-06-06 16:26:25] 2025-06-06 16:26:03,947 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 16:26:25] 2025-06-06 16:26:03,947 | INFO     | pilot state: finished 
[2025-06-06 16:26:25] 2025-06-06 16:26:03,947 | INFO     | transexitcode: 0
[2025-06-06 16:26:25] 2025-06-06 16:26:03,947 | INFO     | exeerrorcode: 0
[2025-06-06 16:26:25] 2025-06-06 16:26:03,947 | INFO     | exeerrordiag: 
[2025-06-06 16:26:25] 2025-06-06 16:26:03,947 | INFO     | exitcode: 0
[2025-06-06 16:26:25] 2025-06-06 16:26:03,947 | INFO     | exitmsg: OK
[2025-06-06 16:26:25] 2025-06-06 16:26:03,948 | INFO     | cpuconsumptiontime: 57080 s
[2025-06-06 16:26:25] 2025-06-06 16:26:03,948 | INFO     | nevents: 400
[2025-06-06 16:26:25] 2025-06-06 16:26:03,948 | INFO     | neventsw: 0
[2025-06-06 16:26:25] 2025-06-06 16:26:03,948 | INFO     | pid: 1623252
[2025-06-06 16:26:25] 2025-06-06 16:26:03,948 | INFO     | pgrp: 1623252
[2025-06-06 16:26:25] 2025-06-06 16:26:03,948 | INFO     | corecount: 12
[2025-06-06 16:26:25] 2025-06-06 16:26:03,948 | INFO     | event service: False
[2025-06-06 16:26:25] 2025-06-06 16:26:03,948 | INFO     | sizes: {0: 2397188, 1: 2397443, 2: 2397443, 12: 2397471, 23: 2397499, 31: 2397733, 34: 2397889, 16131: 2428644, 16133: 2437631, 16137: 2437687, 16204: 2437857}
[2025-06-06 16:26:25] 2025-06-06 16:26:03,948 | INFO     | --------------------------------------------------
[2025-06-06 16:26:25] 2025-06-06 16:26:03,948 | INFO     | 
[2025-06-06 16:26:25] 2025-06-06 16:26:03,948 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-06-06 16:26:25] 2025-06-06 16:26:04,023 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 16:26:25] 2025-06-06 16:26:04,023 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 16:26:25] 2025-06-06 16:26:04,023 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 16:26:25] 2025-06-06 16:26:04,023 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 16:26:25] 2025-06-06 16:26:04,023 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 16:26:25] 2025-06-06 16:26:04,023 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 16:26:25] 2025-06-06 16:26:04,023 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 16:26:25] 2025-06-06 16:26:04,023 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 16:26:25] 2025-06-06 16:26:04,023 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 16:26:25] 2025-06-06 16:26:04,024 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 16:26:25] 2025-06-06 16:26:04,024 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 16:26:25] 2025-06-06 16:26:04,024 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 16:26:25] 2025-06-06 16:26:04,024 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 16:26:25] 2025-06-06 16:26:04,024 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 16:26:25] 2025-06-06 16:26:04,024 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 16:26:25] 2025-06-06 16:26:04,024 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 16:26:25] 2025-06-06 16:26:04,024 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 16:26:25] 2025-06-06 16:26:04,024 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 16:26:25] 2025-06-06 16:26:04,024 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 16:26:25] 2025-06-06 16:26:04,024 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 16:26:25] 2025-06-06 16:26:04,024 | INFO     | job 6668947183 has completed (purged errors)
[2025-06-06 16:26:25] 2025-06-06 16:26:04,025 | INFO     | overall cleanup function is called
[2025-06-06 16:26:25] 2025-06-06 16:26:05,034 | INFO     | --- collectZombieJob: --- 10, [1623252]
[2025-06-06 16:26:25] 2025-06-06 16:26:05,035 | INFO     | zombie collector waiting for pid 1623252
[2025-06-06 16:26:25] 2025-06-06 16:26:05,035 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 16:26:25] 2025-06-06 16:26:05,035 | INFO     | collected zombie processes
[2025-06-06 16:26:25] 2025-06-06 16:26:05,035 | INFO     | will attempt to kill all subprocesses of pid=1623252
[2025-06-06 16:26:25] 2025-06-06 16:26:05,209 | INFO     | process IDs to be killed: [1623252] (in reverse order)
[2025-06-06 16:26:25] 2025-06-06 16:26:05,559 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 16:26:25] 2025-06-06 16:26:05,559 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 16:26:25] 2025-06-06 16:26:05,561 | INFO     | did not find any defunct processes belonging to 1623252
[2025-06-06 16:26:25] 2025-06-06 16:26:05,571 | INFO     | did not find any defunct processes belonging to 1623252
[2025-06-06 16:26:25] 2025-06-06 16:26:05,571 | INFO     | ready for new job
[2025-06-06 16:26:25] 2025-06-06 16:26:05,571 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 16:26:25] 2025-06-06 16:26:05,572 | INFO     | **************************************
[2025-06-06 16:26:25] 2025-06-06 16:26:05,572 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 16:26:25] 2025-06-06 16:26:05,573 | INFO     | **************************************
[2025-06-06 16:26:25] 2025-06-06 16:26:05,573 | INFO     | 
[2025-06-06 16:26:25] 2025-06-06 16:26:05,591 | INFO     | architecture information:
[2025-06-06 16:26:25] 2025-06-06 16:26:05,595 | INFO     | executing command: cat /etc/os-release
[2025-06-06 16:26:25] 2025-06-06 16:26:05,663 | INFO     | cat /etc/os-release:
[2025-06-06 16:26:25] NAME="CentOS Linux"
[2025-06-06 16:26:25] VERSION="7 (Core)"
[2025-06-06 16:26:25] ID="centos"
[2025-06-06 16:26:25] ID_LIKE="rhel fedora"
[2025-06-06 16:26:25] VERSION_ID="7"
[2025-06-06 16:26:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 16:26:25] ANSI_COLOR="0;31"
[2025-06-06 16:26:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 16:26:25] HOME_URL="https://www.centos.org/"
[2025-06-06 16:26:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 16:26:25] 
[2025-06-06 16:26:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 16:26:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 16:26:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 16:26:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 16:26:25] 
[2025-06-06 16:26:25] 2025-06-06 16:26:05,663 | INFO     | **************************************
[2025-06-06 16:26:25] 2025-06-06 16:26:06,167 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-06-06 16:26:25] 2025-06-06 16:26:06,195 | INFO     | sufficient remaining disk space (31673286656 B)
[2025-06-06 16:26:25] 2025-06-06 16:26:06,195 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 16:26:25] 2025-06-06 16:26:06,195 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 16:26:25] 2025-06-06 16:26:06,195 | INFO     | update_server=False
[2025-06-06 16:26:25] 2025-06-06 16:26:06,195 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 16:26:25] 2025-06-06 16:26:06,195 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 16:26:25] 2025-06-06 16:26:06,198 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 16:26:25] 2025-06-06 16:26:06,199 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 16:26:25] 2025-06-06 16:26:06,199 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 16:26:25] 2025-06-06 16:26:06,199 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 16:26:25] 2025-06-06 16:26:06,266 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 16:26:25] 2025-06-06 16:26:06,522 | INFO     | all data control threads have been joined
[2025-06-06 16:26:25] 2025-06-06 16:26:06,538 | INFO     | all job control threads have been joined
[2025-06-06 16:26:25] 2025-06-06 16:26:06,906 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 16:26:25] 2025-06-06 16:26:06,907 | INFO     | aborting loop
[2025-06-06 16:26:25] 2025-06-06 16:26:07,102 | INFO     | all payload control threads have been joined
[2025-06-06 16:26:25] 2025-06-06 16:26:07,199 | INFO     | [job] retrieve thread has finished
[2025-06-06 16:26:25] 2025-06-06 16:26:07,355 | INFO     | [payload] validate_post thread has finished
[2025-06-06 16:26:25] 2025-06-06 16:26:07,527 | INFO     | [data] control thread has finished
[2025-06-06 16:26:25] 2025-06-06 16:26:07,543 | INFO     | [job] control thread has finished
[2025-06-06 16:26:25] 2025-06-06 16:26:07,675 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 16:26:25] 2025-06-06 16:26:07,911 | INFO     | [job] job monitor thread has finished
[2025-06-06 16:26:25] 2025-06-06 16:26:07,999 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 16:26:25] 2025-06-06 16:26:08,035 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 16:26:25] 2025-06-06 16:26:08,107 | INFO     | [payload] control thread has finished
[2025-06-06 16:26:25] 2025-06-06 16:26:08,279 | INFO     | [data] copytool_out thread has finished
[2025-06-06 16:26:25] 2025-06-06 16:26:08,299 | INFO     | [data] copytool_in thread has finished
[2025-06-06 16:26:25] 2025-06-06 16:26:08,378 | INFO     | [payload] failed_post thread has finished
[2025-06-06 16:26:25] 2025-06-06 16:26:08,678 | INFO     | [job] validate thread has finished
[2025-06-06 16:26:25] 2025-06-06 16:26:08,698 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 16:26:25] 2025-06-06 16:26:09,702 | INFO     | [job] queue monitor thread has finished
[2025-06-06 16:26:25] 2025-06-06 16:26:10,210 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 16:26:25] 2025-06-06 16:26:16,346 | INFO     | job.realtimelogging is not enabled
[2025-06-06 16:26:25] 2025-06-06 16:26:17,354 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 16:26:25] 2025-06-06 16:26:19,158 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139652079793984)>', '<ExcThread(monitor, started 139651633362688)>']
[2025-06-06 16:26:25] 2025-06-06 16:26:19,266 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 16:26:25] 2025-06-06 16:26:19,267 | INFO     | [monitor] control thread has ended
[2025-06-06 16:26:25] 2025-06-06 16:26:24,182 | INFO     | all workflow threads have been joined
[2025-06-06 16:26:25] 2025-06-06 16:26:24,183 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 16:26:25] 2025-06-06 16:26:24,184 | INFO     | traces error code: 0
[2025-06-06 16:26:25] 2025-06-06 16:26:24,184 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 16:26:25] 2025-06-06 16:26:24,496 [wrapper] ==== pilot stdout END ====
[2025-06-06 16:26:25] 2025-06-06 16:26:24,515 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 16:26:25] 2025-06-06 16:26:24,535 [wrapper] pilotpid: 1616780
[2025-06-06 16:26:25] 2025-06-06 16:26:24,586 [wrapper] Pilot exit status: 0
[2025-06-06 16:26:25] 2025-06-06 16:26:24,660 [wrapper] pandaids: 6668947183
[2025-06-06 16:26:25] 2025-06-06 16:26:24,675 [wrapper] cleanup supervisor_pilot 1684103 1616781
[2025-06-06 16:26:25] 2025-06-06 16:26:24,677 [wrapper] Test setup, not cleaning
[2025-06-06 16:26:25] 2025-06-06 16:26:24,678 [wrapper] apfmon messages muted
[2025-06-06 16:26:25] 2025-06-06 16:26:24,680 [wrapper] ==== wrapper stdout END ====
[2025-06-06 16:26:25] 2025-06-06 16:26:24,682 [wrapper] ==== wrapper stderr END ====
[2025-06-06 16:26:25]  *** Error codes and diagnostics ***
[2025-06-06 16:26:25]     "exeErrorCode": 0,
[2025-06-06 16:26:25]     "exeErrorDiag": "",
[2025-06-06 16:26:25]     "pilotErrorCode": 0,
[2025-06-06 16:26:25]     "pilotErrorDiag": "",
[2025-06-06 16:26:25]  *** Listing of results directory ***
[2025-06-06 16:26:25] total 422340
[2025-06-06 16:26:25] -rw-r--r-- 1 boinc boinc      5111 May 28 21:47 queuedata.json
[2025-06-06 16:26:25] -rw-r--r-- 1 boinc boinc    495897 May 28 21:47 pilot3.tar.gz
[2025-06-06 16:26:25] -rwx------ 1 boinc boinc     37140 May 28 21:50 runpilot2-wrapper.sh
[2025-06-06 16:26:25] -rw-rw-r-- 1 boinc boinc       100 Jun  6 11:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 16:26:25] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 11:53 run_atlas
[2025-06-06 16:26:25] -rw-rw-r-- 1 boinc boinc       105 Jun  6 11:53 job.xml
[2025-06-06 16:26:25] -rw-r--r-- 2 boinc boinc     15093 Jun  6 11:53 start_atlas.sh
[2025-06-06 16:26:25] drwxrwx--x 2 boinc boinc      4096 Jun  6 11:53 shared
[2025-06-06 16:26:25] -rw-r--r-- 2 boinc boinc    508878 Jun  6 11:53 input.tar.gz
[2025-06-06 16:26:25] -rw-rw-r-- 1 boinc boinc      9357 Jun  6 11:53 init_data.xml
[2025-06-06 16:26:25] -rw-rw-r-- 1 boinc boinc         0 Jun  6 11:53 boinc_lockfile
[2025-06-06 16:26:25] -rw-r--r-- 2 boinc boinc 222412851 Jun  6 11:53 EVNT.44871834._003538.pool.root.1
[2025-06-06 16:26:25] -rw-rw-r-- 1 boinc boinc      2559 Jun  6 11:53 pandaJob.out
[2025-06-06 16:26:25] -rw------- 1 boinc boinc    985741 Jun  6 11:54 agis_schedconf.cvmfs.json
[2025-06-06 16:26:25] drwx------ 4 boinc boinc      4096 Jun  6 11:54 pilot3
[2025-06-06 16:26:25] -rw------- 1 boinc boinc 202326666 Jun  6 16:23 HITS.44871837._090943.pool.root.1
[2025-06-06 16:26:25] -rw-rw-r-- 1 boinc boinc       530 Jun  6 16:24 boinc_task_state.xml
[2025-06-06 16:26:25] -rw------- 1 boinc boinc      1017 Jun  6 16:24 memory_monitor_summary.json
[2025-06-06 16:26:25] -rw------- 1 boinc boinc   1598969 Jun  6 16:24 agis_ddmendpoints.agis.ALL.json
[2025-06-06 16:26:25] -rw------- 1 boinc boinc    469335 Jun  6 16:24 log.44871837._090943.job.log.tgz.1
[2025-06-06 16:26:25] -rw------- 1 boinc boinc        95 Jun  6 16:26 pilot_heartbeat.json
[2025-06-06 16:26:25] -rw------- 1 boinc boinc      7663 Jun  6 16:26 heartbeat.json
[2025-06-06 16:26:25] -rw------- 1 boinc boinc      4571 Jun  6 16:26 pilotlog.txt
[2025-06-06 16:26:25] -rw------- 1 boinc boinc   1482006 Jun  6 16:26 log.44871837._090943.job.log.1
[2025-06-06 16:26:25] -rw------- 1 boinc boinc       357 Jun  6 16:26 output.list
[2025-06-06 16:26:25] -rw-rw-r-- 1 boinc boinc       620 Jun  6 16:26 runtime_log
[2025-06-06 16:26:25] -rw------- 1 boinc boinc   1966080 Jun  6 16:26 result.tar.gz
[2025-06-06 16:26:25] -rw-rw-r-- 1 boinc boinc      8192 Jun  6 16:26 boinc_mmap_file
[2025-06-06 16:26:25] -rw-rw-r-- 1 boinc boinc        28 Jun  6 16:26 wrapper_checkpoint.txt
[2025-06-06 16:26:25] -rw-rw-r-- 1 boinc boinc      8949 Jun  6 16:26 runtime_log.err
[2025-06-06 16:26:25] -rw------- 1 boinc boinc       653 Jun  6 16:26 fIKMDm8pde7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm68cKDmXrh2Yn.diag
[2025-06-06 16:26:25] -rw-rw-r-- 1 boinc boinc     21353 Jun  6 16:26 stderr.txt
[2025-06-06 16:26:25] HITS file was successfully produced:
[2025-06-06 16:26:25] -rw------- 1 boinc boinc 202326666 Jun  6 16:23 shared/HITS.pool.root.1
[2025-06-06 16:26:25]  *** Contents of shared directory: ***
[2025-06-06 16:26:25] total 417236
[2025-06-06 16:26:25] -rw-r--r-- 2 boinc boinc     15093 Jun  6 11:53 start_atlas.sh
[2025-06-06 16:26:25] -rw-r--r-- 2 boinc boinc    508878 Jun  6 11:53 input.tar.gz
[2025-06-06 16:26:25] -rw-r--r-- 2 boinc boinc 222412851 Jun  6 11:53 ATLAS.root_0
[2025-06-06 16:26:25] -rw------- 1 boinc boinc 202326666 Jun  6 16:23 HITS.pool.root.1
[2025-06-06 16:26:25] -rw------- 1 boinc boinc   1966080 Jun  6 16:26 result.tar.gz
16:26:27 (1613170): run_atlas exited; CPU time 57190.402605
16:26:27 (1613170): called boinc_finish(0)

</stderr_txt>
]]>

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