Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
13:50:20 (1646786): wrapper (7.7.26015): starting
13:50:20 (1646786): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 13:50:20] Arguments: --nthreads 12
[2025-06-06 13:50:20] Threads: 12
[2025-06-06 13:50:20] Checking for CVMFS
[2025-06-06 13:50:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 13:50:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 13:50:21] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 13:50:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 13:50:23] 2.12.7.0 16016 4703 63124 146860 2 56 2981233 4096001 912 130560 0 4401651 99.992 1108922 139 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-06 13:50:23] CVMFS is ok
[2025-06-06 13:50:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 13:50:23] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-06 13:50:23] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-06 13:50:23] Further information can be found at the LHC@home message board.
[2025-06-06 13:50:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 13:50:23] Checking for apptainer binary...
[2025-06-06 13:50:23] apptainer is not installed, using version from CVMFS
[2025-06-06 13:50:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 13:50:24] g3250
[2025-06-06 13:50:24] apptainer works
[2025-06-06 13:50:24] Set ATHENA_PROC_NUMBER=12
[2025-06-06 13:50:24] Set ATHENA_CORE_NUMBER=12
[2025-06-06 13:50:25] Starting ATLAS job with PandaID=6667667689
[2025-06-06 13:50:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 18:20:23]  *** The last 200 lines of the pilot log: ***
[2025-06-06 18:20:23] 2025-06-06 18:19:49,183 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 18:20:23] 2025-06-06 18:19:49,183 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 18:20:23] 2025-06-06 18:19:49,183 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 18:20:23] 2025-06-06 18:19:49,183 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 18:20:23] 2025-06-06 18:19:49,191 | INFO     | fitting pss+swap vs Time
[2025-06-06 18:20:23] 2025-06-06 18:19:49,192 | INFO     | sum of square deviations: 5449944045.0
[2025-06-06 18:20:23] 2025-06-06 18:19:49,194 | INFO     | sum of deviations: 59208744912.50008
[2025-06-06 18:20:23] 2025-06-06 18:19:49,194 | INFO     | mean x: 1749225948.5
[2025-06-06 18:20:23] 2025-06-06 18:19:49,194 | INFO     | mean y: 2641218.7423076923
[2025-06-06 18:20:23] 2025-06-06 18:19:49,194 | INFO     | -- intersect: -19001126916.103283
[2025-06-06 18:20:23] 2025-06-06 18:19:49,194 | INFO     | intersect: -19001126916.103283
[2025-06-06 18:20:23] 2025-06-06 18:19:49,199 | INFO     | chi2: 2.7191707963979193
[2025-06-06 18:20:23] 2025-06-06 18:19:49,201 | INFO     | sum of square deviations: 5141528960.0
[2025-06-06 18:20:23] 2025-06-06 18:19:49,202 | INFO     | sum of deviations: 75780869801.00002
[2025-06-06 18:20:23] 2025-06-06 18:19:49,203 | INFO     | mean x: 1749225796.0
[2025-06-06 18:20:23] 2025-06-06 18:19:49,203 | INFO     | mean y: 2649272.0235294118
[2025-06-06 18:20:23] 2025-06-06 18:19:49,203 | INFO     | -- intersect: -25779147024.466965
[2025-06-06 18:20:23] 2025-06-06 18:19:49,203 | INFO     | intersect: -25779147024.466965
[2025-06-06 18:20:23] 2025-06-06 18:19:49,203 | INFO     | chi2: 1.9694649259787427
[2025-06-06 18:20:23] 2025-06-06 18:19:49,203 | INFO     | current chi2=1.9694649259787427 (change=27.571120998074512 %)
[2025-06-06 18:20:23] 2025-06-06 18:19:49,204 | INFO     | sum of square deviations: 4844974562.5
[2025-06-06 18:20:23] 2025-06-06 18:19:49,205 | INFO     | sum of deviations: 73758432948.5
[2025-06-06 18:20:23] 2025-06-06 18:19:49,205 | INFO     | mean x: 1749225643.5
[2025-06-06 18:20:23] 2025-06-06 18:19:49,205 | INFO     | mean y: 2648231.876
[2025-06-06 18:20:23] 2025-06-06 18:19:49,205 | INFO     | -- intersect: -26627035923.022285
[2025-06-06 18:20:23] 2025-06-06 18:19:49,206 | INFO     | intersect: -26627035923.022285
[2025-06-06 18:20:23] 2025-06-06 18:19:49,206 | INFO     | chi2: 1.969971112781801
[2025-06-06 18:20:23] 2025-06-06 18:19:49,206 | INFO     | current chi2=1.969971112781801 (change=-0.025701742457114166 %)
[2025-06-06 18:20:23] 2025-06-06 18:19:49,206 | INFO     | right removable region: 249
[2025-06-06 18:20:23] 2025-06-06 18:19:49,215 | INFO     | sum of square deviations: 5141528960.0
[2025-06-06 18:20:23] 2025-06-06 18:19:49,216 | INFO     | sum of deviations: 3985182033.0
[2025-06-06 18:20:23] 2025-06-06 18:19:49,216 | INFO     | mean x: 1749226101.0
[2025-06-06 18:20:23] 2025-06-06 18:19:49,216 | INFO     | mean y: 2668356.5490196077
[2025-06-06 18:20:23] 2025-06-06 18:19:49,216 | INFO     | -- intersect: -1353150988.939962
[2025-06-06 18:20:23] 2025-06-06 18:19:49,217 | INFO     | intersect: -1353150988.939962
[2025-06-06 18:20:23] 2025-06-06 18:19:49,217 | INFO     | chi2: 0.8299694224448605
[2025-06-06 18:20:23] 2025-06-06 18:19:49,217 | INFO     | current chi2=0.8299694224448605 (change=69.47711326025127 %)
[2025-06-06 18:20:23] 2025-06-06 18:19:49,217 | INFO     | sum of square deviations: 4844974562.5
[2025-06-06 18:20:23] 2025-06-06 18:19:49,227 | INFO     | sum of deviations: -3455519978.5
[2025-06-06 18:20:23] 2025-06-06 18:19:49,227 | INFO     | mean x: 1749226253.5
[2025-06-06 18:20:23] 2025-06-06 18:19:49,227 | INFO     | mean y: 2672161.204
[2025-06-06 18:20:23] 2025-06-06 18:19:49,227 | INFO     | -- intersect: 1250250696.016164
[2025-06-06 18:20:23] 2025-06-06 18:19:49,227 | INFO     | intersect: 1250250696.016164
[2025-06-06 18:20:23] 2025-06-06 18:19:49,228 | INFO     | chi2: 0.7993284840115524
[2025-06-06 18:20:23] 2025-06-06 18:19:49,228 | INFO     | current chi2=0.7993284840115524 (change=3.6918153373709033 %)
[2025-06-06 18:20:23] 2025-06-06 18:19:49,228 | INFO     | left removable region: 20
[2025-06-06 18:20:23] 2025-06-06 18:19:49,228 | INFO     | sum of square deviations: 3723716330.0
[2025-06-06 18:20:23] 2025-06-06 18:19:49,230 | INFO     | sum of deviations: 10980187087.000008
[2025-06-06 18:20:23] 2025-06-06 18:19:49,230 | INFO     | mean x: 1749226223.0
[2025-06-06 18:20:23] 2025-06-06 18:19:49,230 | INFO     | mean y: 2681723.0262008733
[2025-06-06 18:20:23] 2025-06-06 18:19:49,230 | INFO     | -- intersect: -5155292054.752515
[2025-06-06 18:20:23] 2025-06-06 18:19:49,230 | INFO     | intersect: -5155292054.752515
[2025-06-06 18:20:23] 2025-06-06 18:19:49,238 | INFO     | chi2: 0.003077512878121487
[2025-06-06 18:20:23] 2025-06-06 18:19:49,239 | INFO     | -- intersect: -5155292054.752515
[2025-06-06 18:20:23] 2025-06-06 18:19:49,239 | INFO     | current memory leak: 2.95 B/s (using 229 data points, chi2=0.00)
[2025-06-06 18:20:23] 2025-06-06 18:19:49,239 | INFO     | could have reported an average CPU frequency of 3223 MHz (12 samples)
[2025-06-06 18:20:23] 2025-06-06 18:19:49,239 | INFO     | ..............................
[2025-06-06 18:20:23] 2025-06-06 18:19:49,239 | INFO     | . Timing measurements:
[2025-06-06 18:20:23] 2025-06-06 18:19:49,240 | INFO     | . get job = 0 s
[2025-06-06 18:20:23] 2025-06-06 18:19:49,240 | INFO     | . initial setup = 5 s
[2025-06-06 18:20:23] 2025-06-06 18:19:49,240 | INFO     | . payload setup = 62 s
[2025-06-06 18:20:23] 2025-06-06 18:19:49,240 | INFO     | . stage-in = 0 s
[2025-06-06 18:20:23] 2025-06-06 18:19:49,240 | INFO     | . payload execution = 15883 s
[2025-06-06 18:20:23] 2025-06-06 18:19:49,240 | INFO     | . stage-out = 2 s
[2025-06-06 18:20:23] 2025-06-06 18:19:49,240 | INFO     | . log creation = 0 s
[2025-06-06 18:20:23] 2025-06-06 18:19:49,240 | INFO     | ..............................
[2025-06-06 18:20:23] 2025-06-06 18:19:49,910 | INFO     | 
[2025-06-06 18:20:23] 2025-06-06 18:19:49,911 | INFO     | job summary report
[2025-06-06 18:20:23] 2025-06-06 18:19:49,911 | INFO     | --------------------------------------------------
[2025-06-06 18:20:23] 2025-06-06 18:19:49,911 | INFO     | PanDA job id: 6667667689
[2025-06-06 18:20:23] 2025-06-06 18:19:49,911 | INFO     | task id: 44871837
[2025-06-06 18:20:23] 2025-06-06 18:19:49,911 | INFO     | errors: (none)
[2025-06-06 18:20:23] 2025-06-06 18:19:49,911 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 18:20:23] 2025-06-06 18:19:49,911 | INFO     | pilot state: finished 
[2025-06-06 18:20:23] 2025-06-06 18:19:49,911 | INFO     | transexitcode: 0
[2025-06-06 18:20:23] 2025-06-06 18:19:49,911 | INFO     | exeerrorcode: 0
[2025-06-06 18:20:23] 2025-06-06 18:19:49,911 | INFO     | exeerrordiag: 
[2025-06-06 18:20:23] 2025-06-06 18:19:49,912 | INFO     | exitcode: 0
[2025-06-06 18:20:23] 2025-06-06 18:19:49,912 | INFO     | exitmsg: OK
[2025-06-06 18:20:23] 2025-06-06 18:19:49,912 | INFO     | cpuconsumptiontime: 54788 s
[2025-06-06 18:20:23] 2025-06-06 18:19:49,912 | INFO     | nevents: 400
[2025-06-06 18:20:23] 2025-06-06 18:19:49,912 | INFO     | neventsw: 0
[2025-06-06 18:20:23] 2025-06-06 18:19:49,912 | INFO     | pid: 1656863
[2025-06-06 18:20:23] 2025-06-06 18:19:49,912 | INFO     | pgrp: 1656863
[2025-06-06 18:20:23] 2025-06-06 18:19:49,912 | INFO     | corecount: 12
[2025-06-06 18:20:23] 2025-06-06 18:19:49,912 | INFO     | event service: False
[2025-06-06 18:20:23] 2025-06-06 18:19:49,912 | INFO     | sizes: {0: 2396905, 1: 2397613, 2: 2397812, 13: 2397812, 23: 2397868, 34: 2398314, 15949: 2429350, 15950: 2429349, 15952: 2438448, 16040: 2438586}
[2025-06-06 18:20:23] 2025-06-06 18:19:49,912 | INFO     | --------------------------------------------------
[2025-06-06 18:20:23] 2025-06-06 18:19:49,913 | INFO     | 
[2025-06-06 18:20:23] 2025-06-06 18:19:49,913 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-06-06 18:20:23] 2025-06-06 18:19:49,971 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 18:20:23] 2025-06-06 18:19:49,971 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 18:20:23] 2025-06-06 18:19:49,971 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 18:20:23] 2025-06-06 18:19:49,971 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 18:20:23] 2025-06-06 18:19:49,971 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 18:20:23] 2025-06-06 18:19:49,971 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 18:20:23] 2025-06-06 18:19:49,971 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 18:20:23] 2025-06-06 18:19:49,971 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 18:20:23] 2025-06-06 18:19:49,971 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 18:20:23] 2025-06-06 18:19:49,971 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 18:20:23] 2025-06-06 18:19:49,972 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 18:20:23] 2025-06-06 18:19:49,972 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 18:20:23] 2025-06-06 18:19:49,972 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 18:20:23] 2025-06-06 18:19:49,972 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 18:20:23] 2025-06-06 18:19:49,972 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 18:20:23] 2025-06-06 18:19:49,972 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 18:20:23] 2025-06-06 18:19:49,972 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 18:20:23] 2025-06-06 18:19:49,972 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 18:20:23] 2025-06-06 18:19:49,972 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 18:20:23] 2025-06-06 18:19:49,972 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 18:20:23] 2025-06-06 18:19:49,972 | INFO     | job 6667667689 has completed (purged errors)
[2025-06-06 18:20:23] 2025-06-06 18:19:49,972 | INFO     | overall cleanup function is called
[2025-06-06 18:20:23] 2025-06-06 18:19:50,982 | INFO     | --- collectZombieJob: --- 10, [1656863]
[2025-06-06 18:20:23] 2025-06-06 18:19:50,983 | INFO     | zombie collector waiting for pid 1656863
[2025-06-06 18:20:23] 2025-06-06 18:19:50,983 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 18:20:23] 2025-06-06 18:19:50,983 | INFO     | collected zombie processes
[2025-06-06 18:20:23] 2025-06-06 18:19:50,983 | INFO     | will attempt to kill all subprocesses of pid=1656863
[2025-06-06 18:20:23] 2025-06-06 18:19:51,093 | INFO     | process IDs to be killed: [1656863] (in reverse order)
[2025-06-06 18:20:23] 2025-06-06 18:19:51,179 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 18:20:23] 2025-06-06 18:19:51,179 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 18:20:23] 2025-06-06 18:19:51,181 | INFO     | did not find any defunct processes belonging to 1656863
[2025-06-06 18:20:23] 2025-06-06 18:19:51,182 | INFO     | did not find any defunct processes belonging to 1656863
[2025-06-06 18:20:23] 2025-06-06 18:19:51,183 | INFO     | ready for new job
[2025-06-06 18:20:23] 2025-06-06 18:19:51,183 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 18:20:23] 2025-06-06 18:19:51,184 | INFO     | ***************************************
[2025-06-06 18:20:23] 2025-06-06 18:19:51,184 | INFO     | ***  PanDA Pilot version 3.10.3.82  ***
[2025-06-06 18:20:23] 2025-06-06 18:19:51,184 | INFO     | ***************************************
[2025-06-06 18:20:23] 2025-06-06 18:19:51,184 | INFO     | 
[2025-06-06 18:20:23] 2025-06-06 18:19:51,203 | INFO     | architecture information:
[2025-06-06 18:20:23] 2025-06-06 18:19:51,214 | INFO     | executing command: cat /etc/os-release
[2025-06-06 18:20:23] 2025-06-06 18:19:51,259 | INFO     | cat /etc/os-release:
[2025-06-06 18:20:23] NAME="CentOS Linux"
[2025-06-06 18:20:23] VERSION="7 (Core)"
[2025-06-06 18:20:23] ID="centos"
[2025-06-06 18:20:23] ID_LIKE="rhel fedora"
[2025-06-06 18:20:23] VERSION_ID="7"
[2025-06-06 18:20:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 18:20:23] ANSI_COLOR="0;31"
[2025-06-06 18:20:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 18:20:23] HOME_URL="https://www.centos.org/"
[2025-06-06 18:20:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 18:20:23] 
[2025-06-06 18:20:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 18:20:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 18:20:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 18:20:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 18:20:23] 
[2025-06-06 18:20:23] 2025-06-06 18:19:51,259 | INFO     | ***************************************
[2025-06-06 18:20:23] 2025-06-06 18:19:51,762 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-06-06 18:20:23] 2025-06-06 18:19:51,795 | INFO     | sufficient remaining disk space (31860981760 B)
[2025-06-06 18:20:23] 2025-06-06 18:19:51,795 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 18:20:23] 2025-06-06 18:19:51,795 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 18:20:23] 2025-06-06 18:19:51,795 | INFO     | update_server=False
[2025-06-06 18:20:23] 2025-06-06 18:19:51,795 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 18:20:23] 2025-06-06 18:19:52,014 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 18:20:23] 2025-06-06 18:19:52,015 | INFO     | aborting loop
[2025-06-06 18:20:23] 2025-06-06 18:19:52,017 | INFO     | all data control threads have been joined
[2025-06-06 18:20:23] 2025-06-06 18:19:52,598 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 18:20:23] 2025-06-06 18:19:52,799 | INFO     | [job] retrieve thread has finished
[2025-06-06 18:20:23] 2025-06-06 18:19:52,850 | INFO     | all job control threads have been joined
[2025-06-06 18:20:23] 2025-06-06 18:19:52,895 | INFO     | [job] validate thread has finished
[2025-06-06 18:20:23] 2025-06-06 18:19:53,014 | INFO     | all payload control threads have been joined
[2025-06-06 18:20:23] 2025-06-06 18:19:53,023 | INFO     | [job] job monitor thread has finished
[2025-06-06 18:20:23] 2025-06-06 18:19:53,023 | INFO     | [data] control thread has finished
[2025-06-06 18:20:23] 2025-06-06 18:19:53,059 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 18:20:23] 2025-06-06 18:19:53,395 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 18:20:23] 2025-06-06 18:19:53,435 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 18:20:23] 2025-06-06 18:19:53,458 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 18:20:23] 2025-06-06 18:19:53,570 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 18:20:23] 2025-06-06 18:19:53,590 | INFO     | [data] copytool_in thread has finished
[2025-06-06 18:20:23] 2025-06-06 18:19:53,679 | INFO     | [payload] validate_post thread has finished
[2025-06-06 18:20:23] 2025-06-06 18:19:53,858 | INFO     | [job] control thread has finished
[2025-06-06 18:20:23] 2025-06-06 18:19:54,018 | INFO     | [payload] control thread has finished
[2025-06-06 18:20:23] 2025-06-06 18:19:54,334 | INFO     | [payload] failed_post thread has finished
[2025-06-06 18:20:23] 2025-06-06 18:19:54,458 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 18:20:23] 2025-06-06 18:19:54,614 | INFO     | [data] copytool_out thread has finished
[2025-06-06 18:20:23] 2025-06-06 18:19:55,462 | INFO     | [job] queue monitor thread has finished
[2025-06-06 18:20:23] 2025-06-06 18:19:57,594 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 18:20:23] 2025-06-06 18:19:59,702 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140148181423936)>', '<ExcThread(monitor, started 140147886626560)>']
[2025-06-06 18:20:23] 2025-06-06 18:20:04,730 | INFO     | all workflow threads have been joined
[2025-06-06 18:20:23] 2025-06-06 18:20:04,734 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 18:20:23] 2025-06-06 18:20:04,735 | INFO     | traces error code: 0
[2025-06-06 18:20:23] 2025-06-06 18:20:04,735 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 18:20:23] 2025-06-06 18:20:22,691 | INFO     | PID=1650397 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-06 18:20:23] 2025-06-06 18:20:22,692 | INFO     | .. there are 2 such processes running
[2025-06-06 18:20:23] 2025-06-06 18:20:22,692 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 18:20:23] 2025-06-06 18:20:22,692 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 18:20:23] 2025-06-06 18:20:22,692 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 18:20:23] 2025-06-06 18:20:22,692 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 18:20:23] 2025-06-06 18:20:22,692 | INFO     | [monitor] control thread has ended
[2025-06-06 18:20:23] 2025-06-06 18:20:22,791 [wrapper] ==== pilot stdout END ====
[2025-06-06 18:20:23] 2025-06-06 18:20:22,793 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 18:20:23] 2025-06-06 18:20:22,794 [wrapper] pilotpid: 1650397
[2025-06-06 18:20:23] 2025-06-06 18:20:22,796 [wrapper] Pilot exit status: 0
[2025-06-06 18:20:23] 2025-06-06 18:20:22,907 [wrapper] pandaids: 6667667689
[2025-06-06 18:20:23] 2025-06-06 18:20:22,948 [wrapper] cleanup supervisor_pilot 1717498 1650398
[2025-06-06 18:20:23] 2025-06-06 18:20:22,951 [wrapper] Test setup, not cleaning
[2025-06-06 18:20:23] 2025-06-06 18:20:22,953 [wrapper] apfmon messages muted
[2025-06-06 18:20:23] 2025-06-06 18:20:22,987 [wrapper] ==== wrapper stdout END ====
[2025-06-06 18:20:23] 2025-06-06 18:20:23,019 [wrapper] ==== wrapper stderr END ====
[2025-06-06 18:20:23]  *** Error codes and diagnostics ***
[2025-06-06 18:20:23]     "exeErrorCode": 0,
[2025-06-06 18:20:23]     "exeErrorDiag": "",
[2025-06-06 18:20:23]     "pilotErrorCode": 0,
[2025-06-06 18:20:23]     "pilotErrorDiag": "",
[2025-06-06 18:20:23]  *** Listing of results directory ***
[2025-06-06 18:20:23] total 421656
[2025-06-06 18:20:23] -rw-r--r-- 1 boinc boinc    529402 Jun  6 04:19 pilot3.tar.gz
[2025-06-06 18:20:23] -rwx------ 1 boinc boinc     37140 Jun  6 04:34 runpilot2-wrapper.sh
[2025-06-06 18:20:23] -rw-r--r-- 1 boinc boinc      5112 Jun  6 04:34 queuedata.json
[2025-06-06 18:20:23] -rw-rw-r-- 1 boinc boinc       100 Jun  6 13:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 18:20:23] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 13:50 run_atlas
[2025-06-06 18:20:23] -rw-rw-r-- 1 boinc boinc       105 Jun  6 13:50 job.xml
[2025-06-06 18:20:23] -rw-r--r-- 2 boinc boinc     15095 Jun  6 13:50 start_atlas.sh
[2025-06-06 18:20:23] drwxrwx--x 2 boinc boinc      4096 Jun  6 13:50 shared
[2025-06-06 18:20:23] -rw-r--r-- 2 boinc boinc    541912 Jun  6 13:50 input.tar.gz
[2025-06-06 18:20:23] -rw-rw-r-- 1 boinc boinc      9357 Jun  6 13:50 init_data.xml
[2025-06-06 18:20:23] -rw-r--r-- 2 boinc boinc 224972174 Jun  6 13:50 EVNT.44871834._002925.pool.root.1
[2025-06-06 18:20:23] -rw-rw-r-- 1 boinc boinc         0 Jun  6 13:50 boinc_lockfile
[2025-06-06 18:20:23] -rw-rw-r-- 1 boinc boinc      2559 Jun  6 13:50 pandaJob.out
[2025-06-06 18:20:23] -rw------- 1 boinc boinc    985728 Jun  6 13:51 agis_schedconf.cvmfs.json
[2025-06-06 18:20:23] drwx------ 4 boinc boinc      4096 Jun  6 13:51 pilot3
[2025-06-06 18:20:23] -rw------- 1 boinc boinc 199034607 Jun  6 18:17 HITS.44871837._074601.pool.root.1
[2025-06-06 18:20:23] -rw-rw-r-- 1 boinc boinc       530 Jun  6 18:17 boinc_task_state.xml
[2025-06-06 18:20:23] -rw------- 1 boinc boinc      1020 Jun  6 18:18 memory_monitor_summary.json
[2025-06-06 18:20:23] -rw------- 1 boinc boinc   1598969 Jun  6 18:18 agis_ddmendpoints.agis.ALL.json
[2025-06-06 18:20:23] -rw------- 1 boinc boinc    457888 Jun  6 18:18 log.44871837._074601.job.log.tgz.1
[2025-06-06 18:20:23] -rw------- 1 boinc boinc        95 Jun  6 18:19 pilot_heartbeat.json
[2025-06-06 18:20:23] -rw------- 1 boinc boinc      7692 Jun  6 18:19 heartbeat.json
[2025-06-06 18:20:23] -rw-rw-r-- 1 boinc boinc      8192 Jun  6 18:20 boinc_mmap_file
[2025-06-06 18:20:23] -rw-rw-r-- 1 boinc boinc        28 Jun  6 18:20 wrapper_checkpoint.txt
[2025-06-06 18:20:23] -rw------- 1 boinc boinc       822 Jun  6 18:20 pilotlog.txt
[2025-06-06 18:20:23] -rw------- 1 boinc boinc   1478307 Jun  6 18:20 log.44871837._074601.job.log.1
[2025-06-06 18:20:23] -rw------- 1 boinc boinc       357 Jun  6 18:20 output.list
[2025-06-06 18:20:23] -rw-rw-r-- 1 boinc boinc       620 Jun  6 18:20 runtime_log
[2025-06-06 18:20:23] -rw------- 1 boinc boinc   1955840 Jun  6 18:20 result.tar.gz
[2025-06-06 18:20:23] -rw-rw-r-- 1 boinc boinc      8950 Jun  6 18:20 runtime_log.err
[2025-06-06 18:20:23] -rw------- 1 boinc boinc       653 Jun  6 18:20 VqkMDmIydh7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmX6nKDmn5axtm.diag
[2025-06-06 18:20:23] -rw-rw-r-- 1 boinc boinc     21073 Jun  6 18:20 stderr.txt
[2025-06-06 18:20:23] HITS file was successfully produced:
[2025-06-06 18:20:23] -rw------- 1 boinc boinc 199034607 Jun  6 18:17 shared/HITS.pool.root.1
[2025-06-06 18:20:23]  *** Contents of shared directory: ***
[2025-06-06 18:20:23] total 416540
[2025-06-06 18:20:23] -rw-r--r-- 2 boinc boinc     15095 Jun  6 13:50 start_atlas.sh
[2025-06-06 18:20:23] -rw-r--r-- 2 boinc boinc    541912 Jun  6 13:50 input.tar.gz
[2025-06-06 18:20:23] -rw-r--r-- 2 boinc boinc 224972174 Jun  6 13:50 ATLAS.root_0
[2025-06-06 18:20:23] -rw------- 1 boinc boinc 199034607 Jun  6 18:17 HITS.pool.root.1
[2025-06-06 18:20:23] -rw------- 1 boinc boinc   1955840 Jun  6 18:20 result.tar.gz
18:20:24 (1646786): run_atlas exited; CPU time 54899.997491
18:20:24 (1646786): called boinc_finish(0)

</stderr_txt>
]]>

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