Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:27:05 (88328): wrapper (7.7.26015): starting
00:27:05 (88328): wrapper: running run_atlas (--nthreads 8)
[2025-06-06 00:27:05] Arguments: --nthreads 8
[2025-06-06 00:27:05] Threads: 8
[2025-06-06 00:27:05] Checking for CVMFS
[2025-06-06 00:27:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 00:27:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 00:27:05] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 00:27:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 00:27:05] 2.11.2.0 10304 15046 306324 146843 3 420 17427188 18432000 19199 130560 0 128694647 99.295 182888818 53549 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-06 00:27:05] CVMFS is ok
[2025-06-06 00:27:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 00:27:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 00:27:05] Further information can be found at the LHC@home message board.
[2025-06-06 00:27:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 00:27:05] Checking for apptainer binary...
[2025-06-06 00:27:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 00:27:05] Running /usr/bin/apptainer --version
[2025-06-06 00:27:05] apptainer version 1.3.2-1.el7
[2025-06-06 00:27:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 00:27:08] c-212-11.aglt2.org
[2025-06-06 00:27:08] apptainer works
[2025-06-06 00:27:08] Set ATHENA_PROC_NUMBER=8
[2025-06-06 00:27:08] Set ATHENA_CORE_NUMBER=8
[2025-06-06 00:27:08] Starting ATLAS job with PandaID=6668947010
[2025-06-06 00:27:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 02:01:36]  *** The last 200 lines of the pilot log: ***
[2025-06-06 02:01:36]  scope=mc23_13p6TeV
[2025-06-06 02:01:36]  status=None
[2025-06-06 02:01:36]  status_code=0
[2025-06-06 02:01:36]  storage_token=
[2025-06-06 02:01:36]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6668947010/log.44871837._090852.job.log.tgz.1
[2025-06-06 02:01:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/66/a7/log.44871837._090852.job.log.tgz.1
[2025-06-06 02:01:36]  workdir=None
[2025-06-06 02:01:36] ]
[2025-06-06 02:01:36] 2025-06-06 06:01:08,584 | INFO     | transferring file log.44871837._090852.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6668947010/log.44871837._090852.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-06 02:01:36] 2025-06-06 06:01:08,584 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6668947010/log.44871837._090852.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._090852.job
[2025-06-06 02:01:36] 2025-06-06 06:01:08,602 | INFO     | adding to output.list: log.44871837._090852.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/66/a7/log.44871837._090852.job.log.tg
[2025-06-06 02:01:36] 2025-06-06 06:01:08,603 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 02:01:36] 2025-06-06 06:01:08,603 | INFO     | summary of transferred files:
[2025-06-06 02:01:36] 2025-06-06 06:01:08,603 | INFO     |  -- lfn=log.44871837._090852.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 02:01:36] 2025-06-06 06:01:08,603 | INFO     | stage-out finished correctly
[2025-06-06 02:01:36] 2025-06-06 06:01:09,363 | WARNING  | process 899 can no longer be monitored (due to stat problems) - aborting
[2025-06-06 02:01:36] 2025-06-06 06:01:09,363 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668947010/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 02:01:36] 2025-06-06 06:01:09,574 | INFO     | number of running child processes to parent process 899: 1
[2025-06-06 02:01:36] 2025-06-06 06:01:09,574 | INFO     | maximum number of monitored processes: 6
[2025-06-06 02:01:36] 2025-06-06 06:01:11,778 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 02:01:36] 2025-06-06 06:01:12,077 | INFO     | monitor loop #421: job 0:6668947010 is in state 'finished'
[2025-06-06 02:01:36] 2025-06-06 06:01:12,077 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 02:01:36] 2025-06-06 06:01:12,801 | INFO     | PID=92002 has CPU usage=8.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-06 02:01:36] 2025-06-06 06:01:12,801 | INFO     | .. there are 20 such processes running
[2025-06-06 02:01:36] 2025-06-06 06:01:14,280 | INFO     | job 6668947010 has state=finished
[2025-06-06 02:01:36] 2025-06-06 06:01:14,280 | INFO     | preparing for final server update for job 6668947010 in state='finished'
[2025-06-06 02:01:36] 2025-06-06 06:01:14,281 | INFO     | this job has now completed (state=finished)
[2025-06-06 02:01:36] 2025-06-06 06:01:14,281 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 02:01:36] 2025-06-06 06:01:14,281 | INFO     | log transfer has been attempted: DONE
[2025-06-06 02:01:36] 2025-06-06 06:01:14,281 | INFO     | job 6668947010 has finished - writing final server update
[2025-06-06 02:01:36] 2025-06-06 06:01:14,282 | INFO     | total number of processed events: 400 (read)
[2025-06-06 02:01:36] 2025-06-06 06:01:14,286 | INFO     | executing command: lscpu
[2025-06-06 02:01:36] 2025-06-06 06:01:14,324 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 02:01:36] 2025-06-06 06:01:14,581 | INFO     | monitor loop #422: job 0:6668947010 is in state 'finished'
[2025-06-06 02:01:36] 2025-06-06 06:01:14,581 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 02:01:36] 2025-06-06 06:01:17,083 | INFO     | monitor loop #423: job 0:6668947010 is in state 'finished'
[2025-06-06 02:01:36] 2025-06-06 06:01:17,083 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 02:01:36] 2025-06-06 06:01:17,461 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 02:01:36] 2025-06-06 06:01:17,461 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668947010/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 02:01:36] 2025-06-06 06:01:17,462 | INFO     | extracted standard info from prmon json
[2025-06-06 02:01:36] 2025-06-06 06:01:17,462 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 02:01:36] 2025-06-06 06:01:17,463 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 02:01:36] 2025-06-06 06:01:17,463 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 02:01:36] 2025-06-06 06:01:17,463 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 02:01:36] 2025-06-06 06:01:17,465 | INFO     | fitting pss+swap vs Time
[2025-06-06 02:01:36] 2025-06-06 06:01:17,465 | INFO     | sum of square deviations: 190403570.0
[2025-06-06 02:01:36] 2025-06-06 06:01:17,466 | INFO     | sum of deviations: -13124640745.0
[2025-06-06 02:01:36] 2025-06-06 06:01:17,466 | INFO     | mean x: 1749186929.0
[2025-06-06 02:01:36] 2025-06-06 06:01:17,466 | INFO     | mean y: 2629152.5176470587
[2025-06-06 02:01:36] 2025-06-06 06:01:17,466 | INFO     | -- intersect: 120575211058.2814
[2025-06-06 02:01:36] 2025-06-06 06:01:17,466 | INFO     | intersect: 120575211058.2814
[2025-06-06 02:01:36] 2025-06-06 06:01:17,466 | INFO     | chi2: 0.06293668308289847
[2025-06-06 02:01:36] 2025-06-06 06:01:17,466 | INFO     | -- intersect: 120575211058.2814
[2025-06-06 02:01:36] 2025-06-06 06:01:17,466 | INFO     | current memory leak: -68.93 B/s (using 85 data points, chi2=0.06)
[2025-06-06 02:01:36] 2025-06-06 06:01:17,467 | INFO     | ..............................
[2025-06-06 02:01:36] 2025-06-06 06:01:17,467 | INFO     | . Timing measurements:
[2025-06-06 02:01:36] 2025-06-06 06:01:17,467 | INFO     | . get job = 0 s
[2025-06-06 02:01:36] 2025-06-06 06:01:17,467 | INFO     | . initial setup = 2 s
[2025-06-06 02:01:36] 2025-06-06 06:01:17,467 | INFO     | . payload setup = 6 s
[2025-06-06 02:01:36] 2025-06-06 06:01:17,467 | INFO     | . stage-in = 0 s
[2025-06-06 02:01:36] 2025-06-06 06:01:17,467 | INFO     | . payload execution = 5606 s
[2025-06-06 02:01:36] 2025-06-06 06:01:17,467 | INFO     | . stage-out = 0 s
[2025-06-06 02:01:36] 2025-06-06 06:01:17,468 | INFO     | . log creation = 0 s
[2025-06-06 02:01:36] 2025-06-06 06:01:17,468 | INFO     | ..............................
[2025-06-06 02:01:36] 2025-06-06 06:01:17,544 | INFO     | 
[2025-06-06 02:01:36] 2025-06-06 06:01:17,545 | INFO     | job summary report
[2025-06-06 02:01:36] 2025-06-06 06:01:17,545 | INFO     | --------------------------------------------------
[2025-06-06 02:01:36] 2025-06-06 06:01:17,545 | INFO     | PanDA job id: 6668947010
[2025-06-06 02:01:36] 2025-06-06 06:01:17,545 | INFO     | task id: 44871837
[2025-06-06 02:01:36] 2025-06-06 06:01:17,545 | INFO     | errors: (none)
[2025-06-06 02:01:36] 2025-06-06 06:01:17,545 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 02:01:36] 2025-06-06 06:01:17,545 | INFO     | pilot state: finished 
[2025-06-06 02:01:36] 2025-06-06 06:01:17,545 | INFO     | transexitcode: 0
[2025-06-06 02:01:36] 2025-06-06 06:01:17,545 | INFO     | exeerrorcode: 0
[2025-06-06 02:01:36] 2025-06-06 06:01:17,545 | INFO     | exeerrordiag: 
[2025-06-06 02:01:36] 2025-06-06 06:01:17,545 | INFO     | exitcode: 0
[2025-06-06 02:01:36] 2025-06-06 06:01:17,545 | INFO     | exitmsg: OK
[2025-06-06 02:01:36] 2025-06-06 06:01:17,545 | INFO     | cpuconsumptiontime: 39301 s
[2025-06-06 02:01:36] 2025-06-06 06:01:17,545 | INFO     | nevents: 400
[2025-06-06 02:01:36] 2025-06-06 06:01:17,546 | INFO     | neventsw: 0
[2025-06-06 02:01:36] 2025-06-06 06:01:17,546 | INFO     | pid: 899
[2025-06-06 02:01:36] 2025-06-06 06:01:17,546 | INFO     | pgrp: 899
[2025-06-06 02:01:36] 2025-06-06 06:01:17,546 | INFO     | corecount: 8
[2025-06-06 02:01:36] 2025-06-06 06:01:17,546 | INFO     | event service: False
[2025-06-06 02:01:36] 2025-06-06 06:01:17,546 | INFO     | sizes: {0: 2397386, 3: 2397592, 11: 2397620, 5616: 2424068, 5617: 2433009, 5620: 2433065, 5626: 2433363}
[2025-06-06 02:01:36] 2025-06-06 06:01:17,546 | INFO     | --------------------------------------------------
[2025-06-06 02:01:36] 2025-06-06 06:01:17,546 | INFO     | 
[2025-06-06 02:01:36] 2025-06-06 06:01:17,546 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 02:01:36] 2025-06-06 06:01:17,564 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 02:01:36] 2025-06-06 06:01:17,564 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 02:01:36] 2025-06-06 06:01:17,564 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 02:01:36] 2025-06-06 06:01:17,564 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 02:01:36] 2025-06-06 06:01:17,565 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 02:01:36] 2025-06-06 06:01:17,565 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 02:01:36] 2025-06-06 06:01:17,565 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 02:01:36] 2025-06-06 06:01:17,565 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 02:01:36] 2025-06-06 06:01:17,565 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 02:01:36] 2025-06-06 06:01:17,565 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 02:01:36] 2025-06-06 06:01:17,565 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 02:01:36] 2025-06-06 06:01:17,565 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 02:01:36] 2025-06-06 06:01:17,565 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 02:01:36] 2025-06-06 06:01:17,565 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 02:01:36] 2025-06-06 06:01:17,565 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 02:01:36] 2025-06-06 06:01:17,565 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 02:01:36] 2025-06-06 06:01:17,565 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 02:01:36] 2025-06-06 06:01:17,565 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 02:01:36] 2025-06-06 06:01:17,565 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 02:01:36] 2025-06-06 06:01:17,566 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 02:01:36] 2025-06-06 06:01:17,566 | INFO     | job 6668947010 has completed (purged errors)
[2025-06-06 02:01:36] 2025-06-06 06:01:17,566 | INFO     | overall cleanup function is called
[2025-06-06 02:01:36] 2025-06-06 06:01:18,570 | INFO     | --- collectZombieJob: --- 10, [899]
[2025-06-06 02:01:36] 2025-06-06 06:01:18,570 | INFO     | zombie collector waiting for pid 899
[2025-06-06 02:01:36] 2025-06-06 06:01:18,570 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 02:01:36] 2025-06-06 06:01:18,571 | INFO     | collected zombie processes
[2025-06-06 02:01:36] 2025-06-06 06:01:18,571 | INFO     | will attempt to kill all subprocesses of pid=899
[2025-06-06 02:01:36] 2025-06-06 06:01:18,724 | INFO     | process IDs to be killed: [899] (in reverse order)
[2025-06-06 02:01:36] 2025-06-06 06:01:18,791 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 02:01:36] 2025-06-06 06:01:18,791 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 02:01:36] 2025-06-06 06:01:18,798 | INFO     | did not find any defunct processes belonging to 899
[2025-06-06 02:01:36] 2025-06-06 06:01:18,806 | INFO     | did not find any defunct processes belonging to 899
[2025-06-06 02:01:36] 2025-06-06 06:01:18,806 | INFO     | ready for new job
[2025-06-06 02:01:36] 2025-06-06 06:01:18,806 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 02:01:36] 2025-06-06 06:01:18,808 | INFO     | **************************************
[2025-06-06 02:01:36] 2025-06-06 06:01:18,808 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 02:01:36] 2025-06-06 06:01:18,808 | INFO     | **************************************
[2025-06-06 02:01:36] 2025-06-06 06:01:18,808 | INFO     | 
[2025-06-06 02:01:36] 2025-06-06 06:01:18,811 | INFO     | architecture information:
[2025-06-06 02:01:36] 2025-06-06 06:01:18,812 | INFO     | executing command: cat /etc/os-release
[2025-06-06 02:01:36] 2025-06-06 06:01:18,827 | INFO     | cat /etc/os-release:
[2025-06-06 02:01:36] NAME="CentOS Linux"
[2025-06-06 02:01:36] VERSION="7 (Core)"
[2025-06-06 02:01:36] ID="centos"
[2025-06-06 02:01:36] ID_LIKE="rhel fedora"
[2025-06-06 02:01:36] VERSION_ID="7"
[2025-06-06 02:01:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 02:01:36] ANSI_COLOR="0;31"
[2025-06-06 02:01:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 02:01:36] HOME_URL="https://www.centos.org/"
[2025-06-06 02:01:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 02:01:36] 
[2025-06-06 02:01:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 02:01:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 02:01:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 02:01:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 02:01:36] 
[2025-06-06 02:01:36] 2025-06-06 06:01:18,828 | INFO     | **************************************
[2025-06-06 02:01:36] 2025-06-06 06:01:19,330 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 02:01:36] 2025-06-06 06:01:19,346 | INFO     | sufficient remaining disk space (106663247872 B)
[2025-06-06 02:01:36] 2025-06-06 06:01:19,347 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 02:01:36] 2025-06-06 06:01:19,347 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 02:01:36] 2025-06-06 06:01:19,347 | INFO     | update_server=False
[2025-06-06 02:01:36] 2025-06-06 06:01:19,347 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 02:01:36] 2025-06-06 06:01:19,347 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 02:01:36] 2025-06-06 06:01:19,348 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 02:01:36] 2025-06-06 06:01:19,348 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 02:01:36] 2025-06-06 06:01:19,348 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 02:01:36] 2025-06-06 06:01:19,349 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 02:01:36] 2025-06-06 06:01:19,349 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 02:01:36] 2025-06-06 06:01:19,356 | INFO     | all data control threads have been joined
[2025-06-06 02:01:36] 2025-06-06 06:01:19,584 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 02:01:36] 2025-06-06 06:01:19,585 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 02:01:36] 2025-06-06 06:01:19,585 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 02:01:36] 2025-06-06 06:01:19,585 | INFO     | will abort loop
[2025-06-06 02:01:36] 2025-06-06 06:01:19,963 | INFO     | all job control threads have been joined
[2025-06-06 02:01:36] 2025-06-06 06:01:20,006 | INFO     | all payload control threads have been joined
[2025-06-06 02:01:36] 2025-06-06 06:01:20,353 | INFO     | [job] retrieve thread has finished
[2025-06-06 02:01:36] 2025-06-06 06:01:20,354 | INFO     | [job] queue monitor thread has finished
[2025-06-06 02:01:36] 2025-06-06 06:01:20,362 | INFO     | [data] control thread has finished
[2025-06-06 02:01:36] 2025-06-06 06:01:20,590 | INFO     | [job] job monitor thread has finished
[2025-06-06 02:01:36] 2025-06-06 06:01:20,605 | INFO     | [payload] failed_post thread has finished
[2025-06-06 02:01:36] 2025-06-06 06:01:20,907 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 02:01:36] 2025-06-06 06:01:20,915 | INFO     | [job] validate thread has finished
[2025-06-06 02:01:36] 2025-06-06 06:01:20,969 | INFO     | [job] control thread has finished
[2025-06-06 02:01:36] 2025-06-06 06:01:21,012 | INFO     | [payload] control thread has finished
[2025-06-06 02:01:36] 2025-06-06 06:01:21,185 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 02:01:36] 2025-06-06 06:01:21,247 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 02:01:36] 2025-06-06 06:01:21,354 | INFO     | [data] copytool_out thread has finished
[2025-06-06 02:01:36] 2025-06-06 06:01:21,674 | INFO     | [data] copytool_in thread has finished
[2025-06-06 02:01:36] 2025-06-06 06:01:21,801 | INFO     | [payload] validate_post thread has finished
[2025-06-06 02:01:36] 2025-06-06 06:01:22,349 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 02:01:36] 2025-06-06 06:01:26,353 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 02:01:36] 2025-06-06 06:01:30,389 | INFO     | job.realtimelogging is not enabled
[2025-06-06 02:01:36] 2025-06-06 06:01:31,393 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 02:01:36] 2025-06-06 06:01:31,515 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140626242185024)>', '<ExcThread(monitor, started 140625777239808)>']
[2025-06-06 02:01:36] 2025-06-06 06:01:32,416 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 02:01:36] 2025-06-06 06:01:32,416 | INFO     | [monitor] control thread has ended
[2025-06-06 02:01:36] 2025-06-06 06:01:36,540 | INFO     | all workflow threads have been joined
[2025-06-06 02:01:36] 2025-06-06 06:01:36,540 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 02:01:36] 2025-06-06 06:01:36,541 | INFO     | traces error code: 0
[2025-06-06 02:01:36] 2025-06-06 06:01:36,541 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 02:01:36] 2025-06-06 06:01:36,666 [wrapper] ==== pilot stdout END ====
[2025-06-06 02:01:36] 2025-06-06 06:01:36,668 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 02:01:36] 2025-06-06 06:01:36,670 [wrapper] pilotpid: 92002
[2025-06-06 02:01:36] 2025-06-06 06:01:36,676 [wrapper] Pilot exit status: 0
[2025-06-06 02:01:36] 2025-06-06 06:01:36,697 [wrapper] pandaids: 6668947010
[2025-06-06 02:01:36] 2025-06-06 06:01:36,767 [wrapper] cleanup supervisor_pilot 29830 92003
[2025-06-06 02:01:36] 2025-06-06 06:01:36,769 [wrapper] Test setup, not cleaning
[2025-06-06 02:01:36] 2025-06-06 06:01:36,772 [wrapper] apfmon messages muted
[2025-06-06 02:01:36] 2025-06-06 06:01:36,774 [wrapper] ==== wrapper stdout END ====
[2025-06-06 02:01:36] 2025-06-06 06:01:36,776 [wrapper] ==== wrapper stderr END ====
[2025-06-06 02:01:36]  *** Error codes and diagnostics ***
[2025-06-06 02:01:36]     "exeErrorCode": 0,
[2025-06-06 02:01:36]     "exeErrorDiag": "",
[2025-06-06 02:01:36]     "pilotErrorCode": 0,
[2025-06-06 02:01:36]     "pilotErrorDiag": "",
[2025-06-06 02:01:36]  *** Listing of results directory ***
[2025-06-06 02:01:36] total 418504
[2025-06-06 02:01:36] -rw-r--r-- 1 boincer umatlas    495897 May 28 17:08 pilot3.tar.gz
[2025-06-06 02:01:36] -rwx------ 1 boincer umatlas     37140 May 28 17:35 runpilot2-wrapper.sh
[2025-06-06 02:01:36] -rw-r--r-- 1 boincer umatlas      5111 May 28 17:35 queuedata.json
[2025-06-06 02:01:36] -rw-r--r-- 1 boincer umatlas       100 Jun  6 00:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 02:01:36] -rwxr-xr-x 1 boincer umatlas      7986 Jun  6 00:27 run_atlas
[2025-06-06 02:01:36] -rw-r--r-- 1 boincer umatlas       105 Jun  6 00:27 job.xml
[2025-06-06 02:01:36] -rw-r--r-- 2 boincer umatlas 223069374 Jun  6 00:27 EVNT.44871834._003535.pool.root.1
[2025-06-06 02:01:36] -rw-r--r-- 2 boincer umatlas     15093 Jun  6 00:27 start_atlas.sh
[2025-06-06 02:01:36] drwxrwx--x 2 boincer umatlas      4096 Jun  6 00:27 shared
[2025-06-06 02:01:36] -rw-r--r-- 2 boincer umatlas    508881 Jun  6 00:27 input.tar.gz
[2025-06-06 02:01:36] -rw-r--r-- 1 boincer umatlas         0 Jun  6 00:27 boinc_lockfile
[2025-06-06 02:01:36] -rw-r--r-- 1 boincer umatlas      2556 Jun  6 00:27 pandaJob.out
[2025-06-06 02:01:36] -rw------- 1 boincer umatlas    988125 Jun  6 00:27 agis_schedconf.cvmfs.json
[2025-06-06 02:01:36] -rw------- 1 boincer umatlas   1598969 Jun  6 00:27 agis_ddmendpoints.agis.ALL.json
[2025-06-06 02:01:36] drwx------ 4 boincer umatlas      4096 Jun  6 00:27 pilot3
[2025-06-06 02:01:36] -rw-r--r-- 1 boincer umatlas      6387 Jun  6 01:54 init_data.xml
[2025-06-06 02:01:36] -rw-r--r-- 1 boincer umatlas       529 Jun  6 02:00 boinc_task_state.xml
[2025-06-06 02:01:36] -rw------- 1 boincer umatlas 199943443 Jun  6 02:00 HITS.44871837._090852.pool.root.1
[2025-06-06 02:01:36] -rw------- 1 boincer umatlas        95 Jun  6 02:00 pilot_heartbeat.json
[2025-06-06 02:01:36] -rw------- 1 boincer umatlas      1081 Jun  6 02:01 memory_monitor_summary.json
[2025-06-06 02:01:36] -rw------- 1 boincer umatlas    302382 Jun  6 02:01 log.44871837._090852.job.log.tgz.1
[2025-06-06 02:01:36] -rw------- 1 boincer umatlas      7752 Jun  6 02:01 heartbeat.json
[2025-06-06 02:01:36] -rw-r--r-- 1 boincer umatlas      8192 Jun  6 02:01 boinc_mmap_file
[2025-06-06 02:01:36] -rw-r--r-- 1 boincer umatlas        27 Jun  6 02:01 wrapper_checkpoint.txt
[2025-06-06 02:01:36] -rw------- 1 boincer umatlas      4735 Jun  6 02:01 pilotlog.txt
[2025-06-06 02:01:36] -rw------- 1 boincer umatlas    546421 Jun  6 02:01 log.44871837._090852.job.log.1
[2025-06-06 02:01:36] -rw------- 1 boincer umatlas       357 Jun  6 02:01 output.list
[2025-06-06 02:01:36] -rw-r--r-- 1 boincer umatlas       620 Jun  6 02:01 runtime_log
[2025-06-06 02:01:36] -rw------- 1 boincer umatlas    870400 Jun  6 02:01 result.tar.gz
[2025-06-06 02:01:36] -rw-r--r-- 1 boincer umatlas      8659 Jun  6 02:01 runtime_log.err
[2025-06-06 02:01:36] -rw------- 1 boincer umatlas       659 Jun  6 02:01 OxZLDm7bde7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmX8cKDmHfbWHn.diag
[2025-06-06 02:01:36] -rw-r--r-- 1 boincer umatlas     21908 Jun  6 02:01 stderr.txt
[2025-06-06 02:01:36] HITS file was successfully produced:
[2025-06-06 02:01:36] -rw------- 1 boincer umatlas 199943443 Jun  6 02:00 shared/HITS.pool.root.1
[2025-06-06 02:01:36]  *** Contents of shared directory: ***
[2025-06-06 02:01:36] total 414476
[2025-06-06 02:01:36] -rw-r--r-- 2 boincer umatlas 223069374 Jun  6 00:27 ATLAS.root_0
[2025-06-06 02:01:36] -rw-r--r-- 2 boincer umatlas     15093 Jun  6 00:27 start_atlas.sh
[2025-06-06 02:01:36] -rw-r--r-- 2 boincer umatlas    508881 Jun  6 00:27 input.tar.gz
[2025-06-06 02:01:36] -rw------- 1 boincer umatlas 199943443 Jun  6 02:00 HITS.pool.root.1
[2025-06-06 02:01:36] -rw------- 1 boincer umatlas    870400 Jun  6 02:01 result.tar.gz
02:01:38 (88328): run_atlas exited; CPU time 39245.377446
02:01:38 (88328): called boinc_finish(0)

</stderr_txt>
]]>

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