Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:21:50 (1226806): wrapper (7.7.26015): starting
00:21:50 (1226806): wrapper: running run_atlas (--nthreads 10)
[2025-06-06 00:21:50] Arguments: --nthreads 10
[2025-06-06 00:21:50] Threads: 10
[2025-06-06 00:21:50] Checking for CVMFS
[2025-06-06 00:21:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 00:21:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 00:21:50] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 00:21:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 00:21:50] 2.12.6.0 2862250 112696 327816 146843 3 221 18170207 32935936 12125 130560 1 384346610 99.596 412906605 27204 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-06 00:21:50] CVMFS is ok
[2025-06-06 00:21:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 00:21:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 00:21:50] Further information can be found at the LHC@home message board.
[2025-06-06 00:21:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 00:21:50] Checking for apptainer binary...
[2025-06-06 00:21:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 00:21:50] Running /usr/bin/apptainer --version
[2025-06-06 00:21:50] apptainer version 1.4.1-1.el9
[2025-06-06 00:21:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 00:21:50] c-4-37.aglt2.org
[2025-06-06 00:21:50] apptainer works
[2025-06-06 00:21:50] Set ATHENA_PROC_NUMBER=10
[2025-06-06 00:21:50] Set ATHENA_CORE_NUMBER=10
[2025-06-06 00:21:50] Starting ATLAS job with PandaID=6677517760
[2025-06-06 00:21:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 01:31:57]  *** The last 200 lines of the pilot log: ***
[2025-06-06 01:31:57]  status=None
[2025-06-06 01:31:57]  status_code=0
[2025-06-06 01:31:57]  storage_token=
[2025-06-06 01:31:57]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677517760/log.45006595._024594.job.log.tgz.1
[2025-06-06 01:31:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/47/47/log.45006595._024594.job.log.tgz.1
[2025-06-06 01:31:57]  workdir=None
[2025-06-06 01:31:57] ]
[2025-06-06 01:31:57] 2025-06-06 05:31:34,613 | INFO     | transferring file log.45006595._024594.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677517760/log.45006595._024594.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-06 01:31:57] 2025-06-06 05:31:34,613 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677517760/log.45006595._024594.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._024594.job
[2025-06-06 01:31:57] 2025-06-06 05:31:34,625 | INFO     | adding to output.list: log.45006595._024594.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/47/47/log.45006595._024594.job.log.tg
[2025-06-06 01:31:57] 2025-06-06 05:31:34,625 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 01:31:57] 2025-06-06 05:31:34,625 | INFO     | summary of transferred files:
[2025-06-06 01:31:57] 2025-06-06 05:31:34,625 | INFO     |  -- lfn=log.45006595._024594.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 01:31:57] 2025-06-06 05:31:34,626 | INFO     | stage-out finished correctly
[2025-06-06 01:31:57] 2025-06-06 05:31:35,121 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 01:31:57] 2025-06-06 05:31:35,320 | INFO     | job 6677517760 has state=finished
[2025-06-06 01:31:57] 2025-06-06 05:31:35,320 | INFO     | preparing for final server update for job 6677517760 in state='finished'
[2025-06-06 01:31:57] 2025-06-06 05:31:35,321 | INFO     | this job has now completed (state=finished)
[2025-06-06 01:31:57] 2025-06-06 05:31:35,321 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 01:31:57] 2025-06-06 05:31:35,321 | INFO     | log transfer has been attempted: DONE
[2025-06-06 01:31:57] 2025-06-06 05:31:35,321 | INFO     | job 6677517760 has finished - writing final server update
[2025-06-06 01:31:57] 2025-06-06 05:31:35,321 | INFO     | total number of processed events: 400 (read)
[2025-06-06 01:31:57] 2025-06-06 05:31:35,335 | INFO     | executing command: lscpu
[2025-06-06 01:31:57] 2025-06-06 05:31:35,390 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 01:31:57] 2025-06-06 05:31:37,733 | WARNING  | process 1238257 can no longer be monitored (due to stat problems) - aborting
[2025-06-06 01:31:57] 2025-06-06 05:31:37,733 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677517760/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 01:31:57] 2025-06-06 05:31:37,734 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677517760/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 01:31:57] 2025-06-06 05:31:37,735 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3507414 B
[2025-06-06 01:31:57] 2025-06-06 05:31:37,735 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15546 B
[2025-06-06 01:31:57] 2025-06-06 05:31:37,735 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 01:31:57] 2025-06-06 05:31:38,197 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 01:31:57] 2025-06-06 05:31:38,197 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677517760/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 01:31:57] 2025-06-06 05:31:38,203 | INFO     | extracted standard info from prmon json
[2025-06-06 01:31:57] 2025-06-06 05:31:38,204 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 01:31:57] 2025-06-06 05:31:38,204 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 01:31:57] 2025-06-06 05:31:38,204 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 01:31:57] 2025-06-06 05:31:38,204 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 01:31:57] 2025-06-06 05:31:38,206 | INFO     | fitting pss+swap vs Time
[2025-06-06 01:31:57] 2025-06-06 05:31:38,206 | INFO     | sum of square deviations: 70364110.0
[2025-06-06 01:31:57] 2025-06-06 05:31:38,207 | INFO     | sum of deviations: -7212465784.000002
[2025-06-06 01:31:57] 2025-06-06 05:31:38,207 | INFO     | mean x: 1749185883.0
[2025-06-06 01:31:57] 2025-06-06 05:31:38,207 | INFO     | mean y: 2597266.393442623
[2025-06-06 01:31:57] 2025-06-06 05:31:38,207 | INFO     | -- intersect: 179297742632.3098
[2025-06-06 01:31:57] 2025-06-06 05:31:38,207 | INFO     | intersect: 179297742632.3098
[2025-06-06 01:31:57] 2025-06-06 05:31:38,207 | INFO     | chi2: 0.16875059908556597
[2025-06-06 01:31:57] 2025-06-06 05:31:38,207 | INFO     | -- intersect: 179297742632.3098
[2025-06-06 01:31:57] 2025-06-06 05:31:38,207 | INFO     | current memory leak: -102.50 B/s (using 61 data points, chi2=0.17)
[2025-06-06 01:31:57] 2025-06-06 05:31:38,208 | INFO     | ..............................
[2025-06-06 01:31:57] 2025-06-06 05:31:38,208 | INFO     | . Timing measurements:
[2025-06-06 01:31:57] 2025-06-06 05:31:38,208 | INFO     | . get job = 0 s
[2025-06-06 01:31:57] 2025-06-06 05:31:38,208 | INFO     | . initial setup = 3 s
[2025-06-06 01:31:57] 2025-06-06 05:31:38,208 | INFO     | . payload setup = 7 s
[2025-06-06 01:31:57] 2025-06-06 05:31:38,208 | INFO     | . stage-in = 0 s
[2025-06-06 01:31:57] 2025-06-06 05:31:38,208 | INFO     | . payload execution = 4146 s
[2025-06-06 01:31:57] 2025-06-06 05:31:38,208 | INFO     | . stage-out = 0 s
[2025-06-06 01:31:57] 2025-06-06 05:31:38,208 | INFO     | . log creation = 0 s
[2025-06-06 01:31:57] 2025-06-06 05:31:38,208 | INFO     | ..............................
[2025-06-06 01:31:57] 2025-06-06 05:31:38,257 | INFO     | sufficient remaining disk space (76586942464 B)
[2025-06-06 01:31:57] 2025-06-06 05:31:38,269 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-06 01:31:57] 2025-06-06 05:31:38,270 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6677517760: 3802997 B (within 2537553920 B limit)
[2025-06-06 01:31:57] 2025-06-06 05:31:38,270 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6677517760/HITS.45006595._024594.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-06 01:31:57] 2025-06-06 05:31:38,270 | INFO     | total size of present files: 0 B (workdir size: 3802997 B)
[2025-06-06 01:31:57] 2025-06-06 05:31:38,270 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6677517760/HITS.45006595._024594.pool.root.1 since it does not exist
[2025-06-06 01:31:57] 2025-06-06 05:31:38,500 | INFO     | number of running child processes to parent process 1238257: 1
[2025-06-06 01:31:57] 2025-06-06 05:31:38,500 | INFO     | maximum number of monitored processes: 6
[2025-06-06 01:31:57] 2025-06-06 05:31:38,500 | INFO     | aborting job monitoring since job object (job id=6677517760) has expired
[2025-06-06 01:31:57] 2025-06-06 05:31:38,598 | INFO     | 
[2025-06-06 01:31:57] 2025-06-06 05:31:38,598 | INFO     | job summary report
[2025-06-06 01:31:57] 2025-06-06 05:31:38,598 | INFO     | --------------------------------------------------
[2025-06-06 01:31:57] 2025-06-06 05:31:38,599 | INFO     | PanDA job id: 6677517760
[2025-06-06 01:31:57] 2025-06-06 05:31:38,599 | INFO     | task id: 45006595
[2025-06-06 01:31:57] 2025-06-06 05:31:38,599 | INFO     | errors: (none)
[2025-06-06 01:31:57] 2025-06-06 05:31:38,599 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 01:31:57] 2025-06-06 05:31:38,599 | INFO     | pilot state: finished 
[2025-06-06 01:31:57] 2025-06-06 05:31:38,599 | INFO     | transexitcode: 0
[2025-06-06 01:31:57] 2025-06-06 05:31:38,599 | INFO     | exeerrorcode: 0
[2025-06-06 01:31:57] 2025-06-06 05:31:38,599 | INFO     | exeerrordiag: 
[2025-06-06 01:31:57] 2025-06-06 05:31:38,599 | INFO     | exitcode: 0
[2025-06-06 01:31:57] 2025-06-06 05:31:38,599 | INFO     | exitmsg: OK
[2025-06-06 01:31:57] 2025-06-06 05:31:38,600 | INFO     | cpuconsumptiontime: 37228 s
[2025-06-06 01:31:57] 2025-06-06 05:31:38,600 | INFO     | nevents: 400
[2025-06-06 01:31:57] 2025-06-06 05:31:38,600 | INFO     | neventsw: 0
[2025-06-06 01:31:57] 2025-06-06 05:31:38,600 | INFO     | pid: 1238257
[2025-06-06 01:31:57] 2025-06-06 05:31:38,600 | INFO     | pgrp: 1238257
[2025-06-06 01:31:57] 2025-06-06 05:31:38,600 | INFO     | corecount: 10
[2025-06-06 01:31:57] 2025-06-06 05:31:38,600 | INFO     | event service: False
[2025-06-06 01:31:57] 2025-06-06 05:31:38,600 | INFO     | sizes: {0: 2396512, 1: 2397368, 5: 2397574, 12: 2397630, 4157: 2423308, 4158: 2432433, 4161: 2432547}
[2025-06-06 01:31:57] 2025-06-06 05:31:38,600 | INFO     | --------------------------------------------------
[2025-06-06 01:31:57] 2025-06-06 05:31:38,600 | INFO     | 
[2025-06-06 01:31:57] 2025-06-06 05:31:38,601 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 01:31:57] 2025-06-06 05:31:38,616 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 01:31:57] 2025-06-06 05:31:38,617 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 01:31:57] 2025-06-06 05:31:38,617 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 01:31:57] 2025-06-06 05:31:38,617 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 01:31:57] 2025-06-06 05:31:38,617 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 01:31:57] 2025-06-06 05:31:38,617 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 01:31:57] 2025-06-06 05:31:38,617 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 01:31:57] 2025-06-06 05:31:38,617 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 01:31:57] 2025-06-06 05:31:38,617 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 01:31:57] 2025-06-06 05:31:38,617 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 01:31:57] 2025-06-06 05:31:38,617 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 01:31:57] 2025-06-06 05:31:38,617 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 01:31:57] 2025-06-06 05:31:38,617 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 01:31:57] 2025-06-06 05:31:38,617 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 01:31:57] 2025-06-06 05:31:38,617 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 01:31:57] 2025-06-06 05:31:38,618 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 01:31:57] 2025-06-06 05:31:38,618 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 01:31:57] 2025-06-06 05:31:38,618 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 01:31:57] 2025-06-06 05:31:38,618 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 01:31:57] 2025-06-06 05:31:38,618 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 01:31:57] 2025-06-06 05:31:38,618 | INFO     | job 6677517760 has completed (purged errors)
[2025-06-06 01:31:57] 2025-06-06 05:31:38,618 | INFO     | overall cleanup function is called
[2025-06-06 01:31:57] 2025-06-06 05:31:39,625 | INFO     | --- collectZombieJob: --- 10, [1238257]
[2025-06-06 01:31:57] 2025-06-06 05:31:39,625 | INFO     | zombie collector waiting for pid 1238257
[2025-06-06 01:31:57] 2025-06-06 05:31:39,625 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 01:31:57] 2025-06-06 05:31:39,625 | INFO     | collected zombie processes
[2025-06-06 01:31:57] 2025-06-06 05:31:39,626 | INFO     | will attempt to kill all subprocesses of pid=1238257
[2025-06-06 01:31:57] 2025-06-06 05:31:39,825 | INFO     | process IDs to be killed: [1238257] (in reverse order)
[2025-06-06 01:31:57] 2025-06-06 05:31:39,886 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 01:31:57] 2025-06-06 05:31:39,886 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 01:31:57] 2025-06-06 05:31:39,898 | INFO     | did not find any defunct processes belonging to 1238257
[2025-06-06 01:31:57] 2025-06-06 05:31:39,909 | INFO     | did not find any defunct processes belonging to 1238257
[2025-06-06 01:31:57] 2025-06-06 05:31:39,909 | INFO     | ready for new job
[2025-06-06 01:31:57] 2025-06-06 05:31:39,909 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 01:31:57] 2025-06-06 05:31:39,911 | INFO     | **************************************
[2025-06-06 01:31:57] 2025-06-06 05:31:39,911 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 01:31:57] 2025-06-06 05:31:39,911 | INFO     | **************************************
[2025-06-06 01:31:57] 2025-06-06 05:31:39,911 | INFO     | 
[2025-06-06 01:31:57] 2025-06-06 05:31:39,925 | INFO     | architecture information:
[2025-06-06 01:31:57] 2025-06-06 05:31:39,925 | INFO     | executing command: cat /etc/os-release
[2025-06-06 01:31:57] 2025-06-06 05:31:39,938 | INFO     | cat /etc/os-release:
[2025-06-06 01:31:57] NAME="CentOS Linux"
[2025-06-06 01:31:57] VERSION="7 (Core)"
[2025-06-06 01:31:57] ID="centos"
[2025-06-06 01:31:57] ID_LIKE="rhel fedora"
[2025-06-06 01:31:57] VERSION_ID="7"
[2025-06-06 01:31:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 01:31:57] ANSI_COLOR="0;31"
[2025-06-06 01:31:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 01:31:57] HOME_URL="https://www.centos.org/"
[2025-06-06 01:31:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 01:31:57] 
[2025-06-06 01:31:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 01:31:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 01:31:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 01:31:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 01:31:57] 
[2025-06-06 01:31:57] 2025-06-06 05:31:39,938 | INFO     | **************************************
[2025-06-06 01:31:57] 2025-06-06 05:31:40,363 | INFO     | 4182s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-06 01:31:57] 2025-06-06 05:31:40,441 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 01:31:57] 2025-06-06 05:31:40,453 | INFO     | sufficient remaining disk space (76591136768 B)
[2025-06-06 01:31:57] 2025-06-06 05:31:40,453 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 01:31:57] 2025-06-06 05:31:40,453 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 01:31:57] 2025-06-06 05:31:40,453 | INFO     | update_server=False
[2025-06-06 01:31:57] 2025-06-06 05:31:40,453 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 01:31:57] 2025-06-06 05:31:40,454 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 01:31:57] 2025-06-06 05:31:40,454 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 01:31:57] 2025-06-06 05:31:40,454 | INFO     | aborting loop
[2025-06-06 01:31:57] 2025-06-06 05:31:40,642 | INFO     | all job control threads have been joined
[2025-06-06 01:31:57] 2025-06-06 05:31:40,773 | INFO     | all payload control threads have been joined
[2025-06-06 01:31:57] 2025-06-06 05:31:41,127 | INFO     | all data control threads have been joined
[2025-06-06 01:31:57] 2025-06-06 05:31:41,184 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 01:31:57] 2025-06-06 05:31:41,368 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 01:31:57] 2025-06-06 05:31:41,369 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 01:31:57] 2025-06-06 05:31:41,369 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 01:31:57] 2025-06-06 05:31:41,457 | INFO     | [job] job monitor thread has finished
[2025-06-06 01:31:57] 2025-06-06 05:31:41,459 | INFO     | [job] retrieve thread has finished
[2025-06-06 01:31:57] 2025-06-06 05:31:41,626 | INFO     | [job] validate thread has finished
[2025-06-06 01:31:57] 2025-06-06 05:31:41,647 | INFO     | [job] control thread has finished
[2025-06-06 01:31:57] 2025-06-06 05:31:41,778 | INFO     | [payload] control thread has finished
[2025-06-06 01:31:57] 2025-06-06 05:31:42,082 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 01:31:57] 2025-06-06 05:31:42,108 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 01:31:57] 2025-06-06 05:31:42,132 | INFO     | [data] control thread has finished
[2025-06-06 01:31:57] 2025-06-06 05:31:42,294 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 01:31:57] 2025-06-06 05:31:42,459 | INFO     | [data] copytool_out thread has finished
[2025-06-06 01:31:57] 2025-06-06 05:31:42,505 | INFO     | [payload] failed_post thread has finished
[2025-06-06 01:31:57] 2025-06-06 05:31:42,724 | INFO     | [data] copytool_in thread has finished
[2025-06-06 01:31:57] 2025-06-06 05:31:43,028 | INFO     | [payload] validate_post thread has finished
[2025-06-06 01:31:57] 2025-06-06 05:31:43,279 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 01:31:57] 2025-06-06 05:31:44,284 | INFO     | [job] queue monitor thread has finished
[2025-06-06 01:31:57] 2025-06-06 05:31:45,186 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 01:31:57] 2025-06-06 05:31:50,732 | INFO     | job.realtimelogging is not enabled
[2025-06-06 01:31:57] 2025-06-06 05:31:51,738 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 01:31:57] 2025-06-06 05:31:52,191 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139791860258624)>', '<ExcThread(monitor, started 139791370802944)>']
[2025-06-06 01:31:57] 2025-06-06 05:31:52,414 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 01:31:57] 2025-06-06 05:31:52,414 | INFO     | [monitor] control thread has ended
[2025-06-06 01:31:57] 2025-06-06 05:31:57,217 | INFO     | all workflow threads have been joined
[2025-06-06 01:31:57] 2025-06-06 05:31:57,217 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 01:31:57] 2025-06-06 05:31:57,217 | INFO     | traces error code: 0
[2025-06-06 01:31:57] 2025-06-06 05:31:57,218 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 01:31:57] 2025-06-06 05:31:57,373 [wrapper] ==== pilot stdout END ====
[2025-06-06 01:31:57] 2025-06-06 05:31:57,376 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 01:31:57] 2025-06-06 05:31:57,377 [wrapper] pilotpid: 1230406
[2025-06-06 01:31:57] 2025-06-06 05:31:57,379 [wrapper] Pilot exit status: 0
[2025-06-06 01:31:57] 2025-06-06 05:31:57,386 [wrapper] pandaids: 6677517760
[2025-06-06 01:31:57] 2025-06-06 05:31:57,427 [wrapper] cleanup supervisor_pilot 1495024 1230407
[2025-06-06 01:31:57] 2025-06-06 05:31:57,429 [wrapper] Test setup, not cleaning
[2025-06-06 01:31:57] 2025-06-06 05:31:57,431 [wrapper] apfmon messages muted
[2025-06-06 01:31:57] 2025-06-06 05:31:57,432 [wrapper] ==== wrapper stdout END ====
[2025-06-06 01:31:57] 2025-06-06 05:31:57,434 [wrapper] ==== wrapper stderr END ====
[2025-06-06 01:31:57]  *** Error codes and diagnostics ***
[2025-06-06 01:31:57]     "exeErrorCode": 0,
[2025-06-06 01:31:57]     "exeErrorDiag": "",
[2025-06-06 01:31:57]     "pilotErrorCode": 0,
[2025-06-06 01:31:57]     "pilotErrorDiag": "",
[2025-06-06 01:31:57]  *** Listing of results directory ***
[2025-06-06 01:31:57] total 388724
[2025-06-06 01:31:57] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 03:38 pilot3.tar.gz
[2025-06-06 01:31:57] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 03:52 queuedata.json
[2025-06-06 01:31:57] -rwx------. 1 boincer umatlas     37140 Jun  3 03:52 runpilot2-wrapper.sh
[2025-06-06 01:31:57] -rw-r--r--. 1 boincer umatlas       100 Jun  6 00:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 01:31:57] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  6 00:21 run_atlas
[2025-06-06 01:31:57] -rw-r--r--. 1 boincer umatlas       105 Jun  6 00:21 job.xml
[2025-06-06 01:31:57] -rw-r--r--. 2 boincer umatlas 215521597 Jun  6 00:21 EVNT.45006593._000984.pool.root.1
[2025-06-06 01:31:57] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 00:21 start_atlas.sh
[2025-06-06 01:31:57] drwxrwx--x. 2 boincer umatlas      4096 Jun  6 00:21 shared
[2025-06-06 01:31:57] -rw-r--r--. 2 boincer umatlas    508879 Jun  6 00:21 input.tar.gz
[2025-06-06 01:31:57] -rw-r--r--. 1 boincer umatlas         0 Jun  6 00:21 boinc_lockfile
[2025-06-06 01:31:57] -rw-r--r--. 1 boincer umatlas      2524 Jun  6 00:21 pandaJob.out
[2025-06-06 01:31:57] -rw-------. 1 boincer umatlas    988125 Jun  6 00:21 agis_schedconf.cvmfs.json
[2025-06-06 01:31:57] -rw-------. 1 boincer umatlas   1598969 Jun  6 00:21 agis_ddmendpoints.agis.ALL.json
[2025-06-06 01:31:57] drwx------. 4 boincer umatlas      4096 Jun  6 00:22 pilot3
[2025-06-06 01:31:57] -rw-r--r--. 1 boincer umatlas       529 Jun  6 01:31 boinc_task_state.xml
[2025-06-06 01:31:57] -rw-------. 1 boincer umatlas 177205465 Jun  6 01:31 HITS.45006595._024594.pool.root.1
[2025-06-06 01:31:57] -rw-------. 1 boincer umatlas      1038 Jun  6 01:31 memory_monitor_summary.json
[2025-06-06 01:31:57] -rw-------. 1 boincer umatlas    326083 Jun  6 01:31 log.45006595._024594.job.log.tgz.1
[2025-06-06 01:31:57] -rw-------. 1 boincer umatlas        95 Jun  6 01:31 pilot_heartbeat.json
[2025-06-06 01:31:57] -rw-------. 1 boincer umatlas      7719 Jun  6 01:31 heartbeat.json
[2025-06-06 01:31:57] -rw-r--r--. 1 boincer umatlas      6674 Jun  6 01:31 init_data.xml
[2025-06-06 01:31:57] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 01:31 boinc_mmap_file
[2025-06-06 01:31:57] -rw-r--r--. 1 boincer umatlas        27 Jun  6 01:31 wrapper_checkpoint.txt
[2025-06-06 01:31:57] -rw-------. 1 boincer umatlas      4540 Jun  6 01:31 pilotlog.txt
[2025-06-06 01:31:57] -rw-------. 1 boincer umatlas    418948 Jun  6 01:31 log.45006595._024594.job.log.1
[2025-06-06 01:31:57] -rw-------. 1 boincer umatlas       357 Jun  6 01:31 output.list
[2025-06-06 01:31:57] -rw-r--r--. 1 boincer umatlas       620 Jun  6 01:31 runtime_log
[2025-06-06 01:31:57] -rw-------. 1 boincer umatlas    768000 Jun  6 01:31 result.tar.gz
[2025-06-06 01:31:57] -rw-------. 1 boincer umatlas       651 Jun  6 01:31 ZuAMDmlcbg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmaniKDm9KpzOn.diag
[2025-06-06 01:31:57] -rw-r--r--. 1 boincer umatlas      8651 Jun  6 01:31 runtime_log.err
[2025-06-06 01:31:57] -rw-r--r--. 1 boincer umatlas     22218 Jun  6 01:31 stderr.txt
[2025-06-06 01:31:57] HITS file was successfully produced:
[2025-06-06 01:31:57] -rw-------. 1 boincer umatlas 177205465 Jun  6 01:31 shared/HITS.pool.root.1
[2025-06-06 01:31:57]  *** Contents of shared directory: ***
[2025-06-06 01:31:57] total 384796
[2025-06-06 01:31:57] -rw-r--r--. 2 boincer umatlas 215521597 Jun  6 00:21 ATLAS.root_0
[2025-06-06 01:31:57] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 00:21 start_atlas.sh
[2025-06-06 01:31:57] -rw-r--r--. 2 boincer umatlas    508879 Jun  6 00:21 input.tar.gz
[2025-06-06 01:31:57] -rw-------. 1 boincer umatlas 177205465 Jun  6 01:31 HITS.pool.root.1
[2025-06-06 01:31:57] -rw-------. 1 boincer umatlas    768000 Jun  6 01:31 result.tar.gz
01:31:58 (1226806): run_atlas exited; CPU time 37350.546789
01:31:58 (1226806): called boinc_finish(0)

</stderr_txt>
]]>

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