Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:21:11 (676621): wrapper (7.7.26015): starting
00:21:11 (676621): wrapper: running run_atlas (--nthreads 10)
[2025-06-06 00:21:11] Arguments: --nthreads 10
[2025-06-06 00:21:11] Threads: 10
[2025-06-06 00:21:11] Checking for CVMFS
[2025-06-06 00:21:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 00:21:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 00:21:11] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 00:21:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 00:21:11] 2.12.6.0 956287 150674 278548 146843 0 251 26873681 32935936 20164 130560 0 400795869 99.654 375595203 26301 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-06 00:21:11] CVMFS is ok
[2025-06-06 00:21:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 00:21:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 00:21:11] Further information can be found at the LHC@home message board.
[2025-06-06 00:21:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 00:21:11] Checking for apptainer binary...
[2025-06-06 00:21:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 00:21:11] Running /usr/bin/apptainer --version
[2025-06-06 00:21:11] apptainer version 1.4.1-1.el9
[2025-06-06 00:21:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 00:21:12] c-6-4.aglt2.org
[2025-06-06 00:21:12] apptainer works
[2025-06-06 00:21:12] Set ATHENA_PROC_NUMBER=10
[2025-06-06 00:21:12] Set ATHENA_CORE_NUMBER=10
[2025-06-06 00:21:12] Starting ATLAS job with PandaID=6668788527
[2025-06-06 00:21:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 05:18:17]  *** The last 200 lines of the pilot log: ***
[2025-06-06 05:18:17] 2025-06-06 09:17:58,250 | INFO     | executing command: lscpu
[2025-06-06 05:18:17] 2025-06-06 09:17:58,316 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 05:18:17] 2025-06-06 09:17:59,308 | INFO     | monitor loop #1172: job 0:6668788527 is in state 'finished'
[2025-06-06 05:18:17] 2025-06-06 09:17:59,308 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 05:18:17] 2025-06-06 09:18:01,810 | INFO     | monitor loop #1173: job 0:6668788527 is in state 'finished'
[2025-06-06 05:18:17] 2025-06-06 09:18:01,811 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 05:18:17] 2025-06-06 09:18:02,279 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 05:18:17] 2025-06-06 09:18:02,279 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668788527/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 05:18:17] 2025-06-06 09:18:02,280 | INFO     | extracted standard info from prmon json
[2025-06-06 05:18:17] 2025-06-06 09:18:02,280 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 05:18:17] 2025-06-06 09:18:02,280 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 05:18:17] 2025-06-06 09:18:02,281 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 05:18:17] 2025-06-06 09:18:02,281 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 05:18:17] 2025-06-06 09:18:02,284 | INFO     | fitting pss+swap vs Time
[2025-06-06 05:18:17] 2025-06-06 09:18:02,285 | INFO     | sum of square deviations: 7641226532.061874
[2025-06-06 05:18:17] 2025-06-06 09:18:02,286 | INFO     | sum of deviations: -71005986179.9898
[2025-06-06 05:18:17] 2025-06-06 09:18:02,286 | INFO     | mean x: 1749192565.1752577
[2025-06-06 05:18:17] 2025-06-06 09:18:02,286 | INFO     | mean y: 2315936.862542955
[2025-06-06 05:18:17] 2025-06-06 09:18:02,286 | INFO     | -- intersect: 16256662354.65692
[2025-06-06 05:18:17] 2025-06-06 09:18:02,286 | INFO     | intersect: 16256662354.65692
[2025-06-06 05:18:17] 2025-06-06 09:18:02,287 | INFO     | chi2: 2.478636376876295
[2025-06-06 05:18:17] 2025-06-06 09:18:02,287 | INFO     | sum of square deviations: 7254099944.405579
[2025-06-06 05:18:17] 2025-06-06 09:18:02,288 | INFO     | sum of deviations: -66176982681.5245
[2025-06-06 05:18:17] 2025-06-06 09:18:02,288 | INFO     | mean x: 1749192412.6783216
[2025-06-06 05:18:17] 2025-06-06 09:18:02,288 | INFO     | mean y: 2317819.1573426574
[2025-06-06 05:18:17] 2025-06-06 09:18:02,288 | INFO     | -- intersect: 15959676676.576937
[2025-06-06 05:18:17] 2025-06-06 09:18:02,289 | INFO     | intersect: 15959676676.576937
[2025-06-06 05:18:17] 2025-06-06 09:18:02,289 | INFO     | chi2: 2.462253115554435
[2025-06-06 05:18:17] 2025-06-06 09:18:02,289 | INFO     | current chi2=2.462253115554435 (change=0.6609788137825603 %)
[2025-06-06 05:18:17] 2025-06-06 09:18:02,289 | INFO     | right removable region: 285
[2025-06-06 05:18:17] 2025-06-06 09:18:02,289 | INFO     | sum of square deviations: 7254068834.405583
[2025-06-06 05:18:17] 2025-06-06 09:18:02,291 | INFO     | sum of deviations: -118969153275.042
[2025-06-06 05:18:17] 2025-06-06 09:18:02,291 | INFO     | mean x: 1749192717.6783216
[2025-06-06 05:18:17] 2025-06-06 09:18:02,291 | INFO     | mean y: 2334723.4125874126
[2025-06-06 05:18:17] 2025-06-06 09:18:02,291 | INFO     | -- intersect: 28689679893.07167
[2025-06-06 05:18:17] 2025-06-06 09:18:02,291 | INFO     | intersect: 28689679893.07167
[2025-06-06 05:18:17] 2025-06-06 09:18:02,291 | INFO     | chi2: 0.7942528578719051
[2025-06-06 05:18:17] 2025-06-06 09:18:02,291 | INFO     | current chi2=0.7942528578719051 (change=67.9560557860906 %)
[2025-06-06 05:18:17] 2025-06-06 09:18:02,292 | INFO     | sum of square deviations: 6880213711.743763
[2025-06-06 05:18:17] 2025-06-06 09:18:02,293 | INFO     | sum of deviations: -118595780930.46623
[2025-06-06 05:18:17] 2025-06-06 09:18:02,293 | INFO     | mean x: 1749192870.1814947
[2025-06-06 05:18:17] 2025-06-06 09:18:02,293 | INFO     | mean y: 2334543.871886121
[2025-06-06 05:18:17] 2025-06-06 09:18:02,293 | INFO     | -- intersect: 30153562852.825306
[2025-06-06 05:18:17] 2025-06-06 09:18:02,293 | INFO     | intersect: 30153562852.825306
[2025-06-06 05:18:17] 2025-06-06 09:18:02,293 | INFO     | chi2: 0.7422191037484409
[2025-06-06 05:18:17] 2025-06-06 09:18:02,293 | INFO     | current chi2=0.7422191037484409 (change=6.551283210095303 %)
[2025-06-06 05:18:17] 2025-06-06 09:18:02,294 | INFO     | left removable region: 20
[2025-06-06 05:18:17] 2025-06-06 09:18:02,294 | INFO     | sum of square deviations: 5770648841.305654
[2025-06-06 05:18:17] 2025-06-06 09:18:02,295 | INFO     | sum of deviations: -92170096202.90935
[2025-06-06 05:18:17] 2025-06-06 09:18:02,295 | INFO     | mean x: 1749192992.181132
[2025-06-06 05:18:17] 2025-06-06 09:18:02,295 | INFO     | mean y: 2327292.4981132075
[2025-06-06 05:18:17] 2025-06-06 09:18:02,295 | INFO     | -- intersect: 27940829669.002415
[2025-06-06 05:18:17] 2025-06-06 09:18:02,295 | INFO     | intersect: 27940829669.002415
[2025-06-06 05:18:17] 2025-06-06 09:18:02,296 | INFO     | chi2: 0.6980591848661685
[2025-06-06 05:18:17] 2025-06-06 09:18:02,296 | INFO     | -- intersect: 27940829669.002415
[2025-06-06 05:18:17] 2025-06-06 09:18:02,296 | INFO     | current memory leak: -15.97 B/s (using 265 data points, chi2=0.70)
[2025-06-06 05:18:17] 2025-06-06 09:18:02,296 | INFO     | ..............................
[2025-06-06 05:18:17] 2025-06-06 09:18:02,296 | INFO     | . Timing measurements:
[2025-06-06 05:18:17] 2025-06-06 09:18:02,296 | INFO     | . get job = 0 s
[2025-06-06 05:18:17] 2025-06-06 09:18:02,296 | INFO     | . initial setup = 3 s
[2025-06-06 05:18:17] 2025-06-06 09:18:02,297 | INFO     | . payload setup = 10 s
[2025-06-06 05:18:17] 2025-06-06 09:18:02,297 | INFO     | . stage-in = 0 s
[2025-06-06 05:18:17] 2025-06-06 09:18:02,297 | INFO     | . payload execution = 17755 s
[2025-06-06 05:18:17] 2025-06-06 09:18:02,297 | INFO     | . stage-out = 2 s
[2025-06-06 05:18:17] 2025-06-06 09:18:02,297 | INFO     | . log creation = 0 s
[2025-06-06 05:18:17] 2025-06-06 09:18:02,297 | INFO     | ..............................
[2025-06-06 05:18:17] 2025-06-06 09:18:02,357 | INFO     | 
[2025-06-06 05:18:17] 2025-06-06 09:18:02,357 | INFO     | job summary report
[2025-06-06 05:18:17] 2025-06-06 09:18:02,357 | INFO     | --------------------------------------------------
[2025-06-06 05:18:17] 2025-06-06 09:18:02,357 | INFO     | PanDA job id: 6668788527
[2025-06-06 05:18:17] 2025-06-06 09:18:02,357 | INFO     | task id: 44871837
[2025-06-06 05:18:17] 2025-06-06 09:18:02,358 | INFO     | errors: (none)
[2025-06-06 05:18:17] 2025-06-06 09:18:02,358 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 05:18:17] 2025-06-06 09:18:02,358 | INFO     | pilot state: finished 
[2025-06-06 05:18:17] 2025-06-06 09:18:02,358 | INFO     | transexitcode: 0
[2025-06-06 05:18:17] 2025-06-06 09:18:02,358 | INFO     | exeerrorcode: 0
[2025-06-06 05:18:17] 2025-06-06 09:18:02,358 | INFO     | exeerrordiag: 
[2025-06-06 05:18:17] 2025-06-06 09:18:02,358 | INFO     | exitcode: 0
[2025-06-06 05:18:17] 2025-06-06 09:18:02,358 | INFO     | exitmsg: OK
[2025-06-06 05:18:17] 2025-06-06 09:18:02,358 | INFO     | cpuconsumptiontime: 63524 s
[2025-06-06 05:18:17] 2025-06-06 09:18:02,358 | INFO     | nevents: 400
[2025-06-06 05:18:17] 2025-06-06 09:18:02,358 | INFO     | neventsw: 0
[2025-06-06 05:18:17] 2025-06-06 09:18:02,358 | INFO     | pid: 689406
[2025-06-06 05:18:17] 2025-06-06 09:18:02,358 | INFO     | pgrp: 689406
[2025-06-06 05:18:17] 2025-06-06 09:18:02,358 | INFO     | corecount: 10
[2025-06-06 05:18:17] 2025-06-06 09:18:02,358 | INFO     | event service: False
[2025-06-06 05:18:17] 2025-06-06 09:18:02,358 | INFO     | sizes: {0: 2396563, 1: 2397419, 10: 2397625, 12: 2397653, 17769: 2429874, 17772: 2438815, 17773: 2438999, 17779: 2439169}
[2025-06-06 05:18:17] 2025-06-06 09:18:02,358 | INFO     | --------------------------------------------------
[2025-06-06 05:18:17] 2025-06-06 09:18:02,359 | INFO     | 
[2025-06-06 05:18:17] 2025-06-06 09:18:02,359 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 05:18:17] 2025-06-06 09:18:02,378 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 05:18:17] 2025-06-06 09:18:02,378 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 05:18:17] 2025-06-06 09:18:02,378 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 05:18:17] 2025-06-06 09:18:02,378 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 05:18:17] 2025-06-06 09:18:02,378 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 05:18:17] 2025-06-06 09:18:02,378 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 05:18:17] 2025-06-06 09:18:02,378 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 05:18:17] 2025-06-06 09:18:02,378 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 05:18:17] 2025-06-06 09:18:02,378 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 05:18:17] 2025-06-06 09:18:02,378 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 05:18:17] 2025-06-06 09:18:02,379 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 05:18:17] 2025-06-06 09:18:02,379 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 05:18:17] 2025-06-06 09:18:02,379 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 05:18:17] 2025-06-06 09:18:02,379 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 05:18:17] 2025-06-06 09:18:02,379 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 05:18:17] 2025-06-06 09:18:02,379 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 05:18:17] 2025-06-06 09:18:02,379 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 05:18:17] 2025-06-06 09:18:02,379 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 05:18:17] 2025-06-06 09:18:02,379 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 05:18:17] 2025-06-06 09:18:02,379 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 05:18:17] 2025-06-06 09:18:02,379 | INFO     | job 6668788527 has completed (purged errors)
[2025-06-06 05:18:17] 2025-06-06 09:18:02,379 | INFO     | overall cleanup function is called
[2025-06-06 05:18:17] 2025-06-06 09:18:03,387 | INFO     | --- collectZombieJob: --- 10, [689406]
[2025-06-06 05:18:17] 2025-06-06 09:18:03,387 | INFO     | zombie collector waiting for pid 689406
[2025-06-06 05:18:17] 2025-06-06 09:18:03,387 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 05:18:17] 2025-06-06 09:18:03,388 | INFO     | collected zombie processes
[2025-06-06 05:18:17] 2025-06-06 09:18:03,388 | INFO     | will attempt to kill all subprocesses of pid=689406
[2025-06-06 05:18:17] 2025-06-06 09:18:03,767 | INFO     | process IDs to be killed: [689406] (in reverse order)
[2025-06-06 05:18:17] 2025-06-06 09:18:03,876 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 05:18:17] 2025-06-06 09:18:03,876 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 05:18:17] 2025-06-06 09:18:03,890 | INFO     | did not find any defunct processes belonging to 689406
[2025-06-06 05:18:17] 2025-06-06 09:18:03,904 | INFO     | did not find any defunct processes belonging to 689406
[2025-06-06 05:18:17] 2025-06-06 09:18:03,904 | INFO     | ready for new job
[2025-06-06 05:18:17] 2025-06-06 09:18:03,904 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 05:18:17] 2025-06-06 09:18:03,906 | INFO     | **************************************
[2025-06-06 05:18:17] 2025-06-06 09:18:03,906 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 05:18:17] 2025-06-06 09:18:03,907 | INFO     | **************************************
[2025-06-06 05:18:17] 2025-06-06 09:18:03,907 | INFO     | 
[2025-06-06 05:18:17] 2025-06-06 09:18:03,921 | INFO     | architecture information:
[2025-06-06 05:18:17] 2025-06-06 09:18:03,922 | INFO     | executing command: cat /etc/os-release
[2025-06-06 05:18:17] 2025-06-06 09:18:03,937 | INFO     | cat /etc/os-release:
[2025-06-06 05:18:17] NAME="CentOS Linux"
[2025-06-06 05:18:17] VERSION="7 (Core)"
[2025-06-06 05:18:17] ID="centos"
[2025-06-06 05:18:17] ID_LIKE="rhel fedora"
[2025-06-06 05:18:17] VERSION_ID="7"
[2025-06-06 05:18:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 05:18:17] ANSI_COLOR="0;31"
[2025-06-06 05:18:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 05:18:17] HOME_URL="https://www.centos.org/"
[2025-06-06 05:18:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 05:18:17] 
[2025-06-06 05:18:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 05:18:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 05:18:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 05:18:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 05:18:17] 
[2025-06-06 05:18:17] 2025-06-06 09:18:03,938 | INFO     | **************************************
[2025-06-06 05:18:17] 2025-06-06 09:18:04,441 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 05:18:17] 2025-06-06 09:18:04,456 | INFO     | sufficient remaining disk space (76477890560 B)
[2025-06-06 05:18:17] 2025-06-06 09:18:04,457 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 05:18:17] 2025-06-06 09:18:04,457 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 05:18:17] 2025-06-06 09:18:04,457 | INFO     | update_server=False
[2025-06-06 05:18:17] 2025-06-06 09:18:04,457 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 05:18:17] 2025-06-06 09:18:05,049 | INFO     | all job control threads have been joined
[2025-06-06 05:18:17] 2025-06-06 09:18:05,209 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 05:18:17] 2025-06-06 09:18:05,321 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 05:18:17] 2025-06-06 09:18:05,322 | INFO     | aborting loop
[2025-06-06 05:18:17] 2025-06-06 09:18:05,464 | INFO     | [job] retrieve thread has finished
[2025-06-06 05:18:17] 2025-06-06 09:18:05,473 | INFO     | all data control threads have been joined
[2025-06-06 05:18:17] 2025-06-06 09:18:05,577 | INFO     | all payload control threads have been joined
[2025-06-06 05:18:17] 2025-06-06 09:18:05,670 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 05:18:17] 2025-06-06 09:18:05,798 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 05:18:17] 2025-06-06 09:18:05,906 | INFO     | PID=680220 has CPU usage=13.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-06 05:18:17] 2025-06-06 09:18:05,906 | INFO     | .. there are 25 such processes running
[2025-06-06 05:18:17] 2025-06-06 09:18:05,906 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 05:18:17] 2025-06-06 09:18:05,906 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 05:18:17] 2025-06-06 09:18:05,907 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 05:18:17] 2025-06-06 09:18:05,967 | INFO     | [job] validate thread has finished
[2025-06-06 05:18:17] 2025-06-06 09:18:06,052 | INFO     | [data] copytool_in thread has finished
[2025-06-06 05:18:17] 2025-06-06 09:18:06,054 | INFO     | [job] control thread has finished
[2025-06-06 05:18:17] 2025-06-06 09:18:06,220 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 05:18:17] 2025-06-06 09:18:06,240 | INFO     | [payload] validate_post thread has finished
[2025-06-06 05:18:17] 2025-06-06 09:18:06,327 | INFO     | [job] job monitor thread has finished
[2025-06-06 05:18:17] 2025-06-06 09:18:06,478 | INFO     | [data] control thread has finished
[2025-06-06 05:18:17] 2025-06-06 09:18:06,547 | INFO     | [payload] failed_post thread has finished
[2025-06-06 05:18:17] 2025-06-06 09:18:06,584 | INFO     | [payload] control thread has finished
[2025-06-06 05:18:17] 2025-06-06 09:18:06,808 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 05:18:17] 2025-06-06 09:18:07,149 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 05:18:17] 2025-06-06 09:18:07,215 | INFO     | [data] copytool_out thread has finished
[2025-06-06 05:18:17] 2025-06-06 09:18:07,367 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 05:18:17] 2025-06-06 09:18:08,372 | INFO     | [job] queue monitor thread has finished
[2025-06-06 05:18:17] 2025-06-06 09:18:11,157 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 05:18:17] 2025-06-06 09:18:12,625 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140680980535104)>', '<ExcThread(monitor, started 140680462571264)>']
[2025-06-06 05:18:17] 2025-06-06 09:18:12,941 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 05:18:17] 2025-06-06 09:18:12,942 | INFO     | [monitor] control thread has ended
[2025-06-06 05:18:17] 2025-06-06 09:18:17,650 | INFO     | all workflow threads have been joined
[2025-06-06 05:18:17] 2025-06-06 09:18:17,651 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 05:18:17] 2025-06-06 09:18:17,651 | INFO     | traces error code: 0
[2025-06-06 05:18:17] 2025-06-06 09:18:17,651 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 05:18:17] 2025-06-06 09:18:17,802 [wrapper] ==== pilot stdout END ====
[2025-06-06 05:18:17] 2025-06-06 09:18:17,805 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 05:18:17] 2025-06-06 09:18:17,807 [wrapper] pilotpid: 680220
[2025-06-06 05:18:17] 2025-06-06 09:18:17,811 [wrapper] Pilot exit status: 0
[2025-06-06 05:18:17] 2025-06-06 09:18:17,828 [wrapper] pandaids: 6668788527
[2025-06-06 05:18:17] 2025-06-06 09:18:17,893 [wrapper] cleanup supervisor_pilot 1814947 680221
[2025-06-06 05:18:17] 2025-06-06 09:18:17,896 [wrapper] Test setup, not cleaning
[2025-06-06 05:18:17] 2025-06-06 09:18:17,898 [wrapper] apfmon messages muted
[2025-06-06 05:18:17] 2025-06-06 09:18:17,899 [wrapper] ==== wrapper stdout END ====
[2025-06-06 05:18:17] 2025-06-06 09:18:17,902 [wrapper] ==== wrapper stderr END ====
[2025-06-06 05:18:17]  *** Error codes and diagnostics ***
[2025-06-06 05:18:17]     "exeErrorCode": 0,
[2025-06-06 05:18:17]     "exeErrorDiag": "",
[2025-06-06 05:18:17]     "pilotErrorCode": 0,
[2025-06-06 05:18:17]     "pilotErrorDiag": "",
[2025-06-06 05:18:17]  *** Listing of results directory ***
[2025-06-06 05:18:17] total 421252
[2025-06-06 05:18:17] -rw-r--r--. 1 boincer umatlas    495897 May 28 14:10 pilot3.tar.gz
[2025-06-06 05:18:17] -rwx------. 1 boincer umatlas     37140 May 28 14:35 runpilot2-wrapper.sh
[2025-06-06 05:18:17] -rw-r--r--. 1 boincer umatlas      5111 May 28 14:35 queuedata.json
[2025-06-06 05:18:17] -rw-r--r--. 1 boincer umatlas       100 Jun  6 00:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 05:18:17] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  6 00:21 run_atlas
[2025-06-06 05:18:17] -rw-r--r--. 1 boincer umatlas       105 Jun  6 00:21 job.xml
[2025-06-06 05:18:17] -rw-r--r--. 2 boincer umatlas 225960533 Jun  6 00:21 EVNT.44871834._003455.pool.root.1
[2025-06-06 05:18:17] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 00:21 start_atlas.sh
[2025-06-06 05:18:17] drwxrwx--x. 2 boincer umatlas      4096 Jun  6 00:21 shared
[2025-06-06 05:18:17] -rw-r--r--. 2 boincer umatlas    508874 Jun  6 00:21 input.tar.gz
[2025-06-06 05:18:17] -rw-r--r--. 1 boincer umatlas         0 Jun  6 00:21 boinc_lockfile
[2025-06-06 05:18:17] -rw-r--r--. 1 boincer umatlas      2558 Jun  6 00:21 pandaJob.out
[2025-06-06 05:18:17] -rw-------. 1 boincer umatlas    988125 Jun  6 00:21 agis_schedconf.cvmfs.json
[2025-06-06 05:18:17] drwx------. 4 boincer umatlas      4096 Jun  6 00:21 pilot3
[2025-06-06 05:18:17] -rw-r--r--. 1 boincer umatlas      6672 Jun  6 05:11 init_data.xml
[2025-06-06 05:18:17] -rw-------. 1 boincer umatlas 197552522 Jun  6 05:17 HITS.44871837._088754.pool.root.1
[2025-06-06 05:18:17] -rw-r--r--. 1 boincer umatlas       531 Jun  6 05:17 boinc_task_state.xml
[2025-06-06 05:18:17] -rw-------. 1 boincer umatlas        95 Jun  6 05:17 pilot_heartbeat.json
[2025-06-06 05:18:17] -rw-------. 1 boincer umatlas      1053 Jun  6 05:17 memory_monitor_summary.json
[2025-06-06 05:18:17] -rw-------. 1 boincer umatlas   1598969 Jun  6 05:17 agis_ddmendpoints.agis.ALL.json
[2025-06-06 05:18:17] -rw-------. 1 boincer umatlas    471033 Jun  6 05:17 log.44871837._088754.job.log.tgz.1
[2025-06-06 05:18:17] -rw-------. 1 boincer umatlas      7740 Jun  6 05:18 heartbeat.json
[2025-06-06 05:18:17] -rw-r--r--. 1 boincer umatlas        28 Jun  6 05:18 wrapper_checkpoint.txt
[2025-06-06 05:18:17] -rw-------. 1 boincer umatlas      4748 Jun  6 05:18 pilotlog.txt
[2025-06-06 05:18:17] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 05:18 boinc_mmap_file
[2025-06-06 05:18:17] -rw-------. 1 boincer umatlas   1536269 Jun  6 05:18 log.44871837._088754.job.log.1
[2025-06-06 05:18:17] -rw-------. 1 boincer umatlas       357 Jun  6 05:18 output.list
[2025-06-06 05:18:17] -rw-r--r--. 1 boincer umatlas       620 Jun  6 05:18 runtime_log
[2025-06-06 05:18:17] -rw-------. 1 boincer umatlas   2027520 Jun  6 05:18 result.tar.gz
[2025-06-06 05:18:17] -rw-------. 1 boincer umatlas       657 Jun  6 05:18 HnBLDmBoae7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0ncKDmi6QNGn.diag
[2025-06-06 05:18:17] -rw-r--r--. 1 boincer umatlas      8647 Jun  6 05:18 runtime_log.err
[2025-06-06 05:18:17] -rw-r--r--. 1 boincer umatlas     21274 Jun  6 05:18 stderr.txt
[2025-06-06 05:18:17] HITS file was successfully produced:
[2025-06-06 05:18:17] -rw-------. 1 boincer umatlas 197552522 Jun  6 05:17 shared/HITS.pool.root.1
[2025-06-06 05:18:17]  *** Contents of shared directory: ***
[2025-06-06 05:18:17] total 416092
[2025-06-06 05:18:17] -rw-r--r--. 2 boincer umatlas 225960533 Jun  6 00:21 ATLAS.root_0
[2025-06-06 05:18:17] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 00:21 start_atlas.sh
[2025-06-06 05:18:17] -rw-r--r--. 2 boincer umatlas    508874 Jun  6 00:21 input.tar.gz
[2025-06-06 05:18:17] -rw-------. 1 boincer umatlas 197552522 Jun  6 05:17 HITS.pool.root.1
[2025-06-06 05:18:17] -rw-------. 1 boincer umatlas   2027520 Jun  6 05:18 result.tar.gz
05:18:19 (676621): run_atlas exited; CPU time 64198.306623
05:18:19 (676621): called boinc_finish(0)

</stderr_txt>
]]>

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