Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:58:58 (3387839): wrapper (7.7.26015): starting
23:58:58 (3387839): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 23:58:58] Arguments: --nthreads 12
[2025-06-05 23:58:58] Threads: 12
[2025-06-05 23:58:58] Checking for CVMFS
[2025-06-05 23:58:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 23:58:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 23:58:58] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 23:58:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 23:58:59] 2.12.6.0 5047 33822 447644 146842 1 527 31367320 32935936 14691 16776704 1 110393766 99.634 109116985 27055 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 23:58:59] CVMFS is ok
[2025-06-05 23:58:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 23:58:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 23:58:59] Further information can be found at the LHC@home message board.
[2025-06-05 23:58:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 23:58:59] Checking for apptainer binary...
[2025-06-05 23:58:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 23:58:59] Running /usr/bin/apptainer --version
[2025-06-05 23:58:59] apptainer version 1.4.1-1.el9
[2025-06-05 23:58:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 23:58:59] c6-6-39-2.aglt2.org
[2025-06-05 23:58:59] apptainer works
[2025-06-05 23:58:59] Set ATHENA_PROC_NUMBER=12
[2025-06-05 23:58:59] Set ATHENA_CORE_NUMBER=12
[2025-06-05 23:58:59] Starting ATLAS job with PandaID=6677676320
[2025-06-05 23:58:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 01:39:31]  *** The last 200 lines of the pilot log: ***
[2025-06-06 01:39:31]  is_tar=False
[2025-06-06 01:39:31]  lfn=log.45006595._036444.job.log.tgz.1
[2025-06-06 01:39:31]  mtime=0
[2025-06-06 01:39:31]  protocol_id=None
[2025-06-06 01:39:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 01:39:31]  replicas=None
[2025-06-06 01:39:31]  scope=mc23_13p6TeV
[2025-06-06 01:39:31]  status=None
[2025-06-06 01:39:31]  status_code=0
[2025-06-06 01:39:31]  storage_token=
[2025-06-06 01:39:31]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677676320/log.45006595._036444.job.log.tgz.1
[2025-06-06 01:39:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/43/f8/log.45006595._036444.job.log.tgz.1
[2025-06-06 01:39:31]  workdir=None
[2025-06-06 01:39:31] ]
[2025-06-06 01:39:31] 2025-06-06 05:39:03,080 | INFO     | transferring file log.45006595._036444.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677676320/log.45006595._036444.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-06 01:39:31] 2025-06-06 05:39:03,080 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677676320/log.45006595._036444.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._036444.job
[2025-06-06 01:39:31] 2025-06-06 05:39:03,101 | INFO     | adding to output.list: log.45006595._036444.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/43/f8/log.45006595._036444.job.log.tg
[2025-06-06 01:39:31] 2025-06-06 05:39:03,102 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 01:39:31] 2025-06-06 05:39:03,102 | INFO     | summary of transferred files:
[2025-06-06 01:39:31] 2025-06-06 05:39:03,103 | INFO     |  -- lfn=log.45006595._036444.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 01:39:31] 2025-06-06 05:39:03,103 | INFO     | stage-out finished correctly
[2025-06-06 01:39:31] 2025-06-06 05:39:04,916 | INFO     | monitor loop #419: job 0:6677676320 is in state 'finished'
[2025-06-06 01:39:31] 2025-06-06 05:39:04,918 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 01:39:31] 2025-06-06 05:39:06,575 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 01:39:31] 2025-06-06 05:39:06,651 | INFO     | job 6677676320 has state=finished
[2025-06-06 01:39:31] 2025-06-06 05:39:06,652 | INFO     | preparing for final server update for job 6677676320 in state='finished'
[2025-06-06 01:39:31] 2025-06-06 05:39:06,653 | INFO     | this job has now completed (state=finished)
[2025-06-06 01:39:31] 2025-06-06 05:39:06,653 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 01:39:31] 2025-06-06 05:39:06,654 | INFO     | log transfer has been attempted: DONE
[2025-06-06 01:39:31] 2025-06-06 05:39:06,654 | INFO     | job 6677676320 has finished - writing final server update
[2025-06-06 01:39:31] 2025-06-06 05:39:06,654 | INFO     | total number of processed events: 400 (read)
[2025-06-06 01:39:31] 2025-06-06 05:39:06,674 | INFO     | executing command: lscpu
[2025-06-06 01:39:31] 2025-06-06 05:39:06,729 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 01:39:31] 2025-06-06 05:39:06,803 | INFO     | PID=3392828 has CPU usage=11.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-06 01:39:31] 2025-06-06 05:39:06,803 | INFO     | .. there are 15 such processes running
[2025-06-06 01:39:31] 2025-06-06 05:39:07,422 | INFO     | monitor loop #420: job 0:6677676320 is in state 'finished'
[2025-06-06 01:39:31] 2025-06-06 05:39:07,422 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 01:39:31] 2025-06-06 05:39:09,926 | INFO     | monitor loop #421: job 0:6677676320 is in state 'finished'
[2025-06-06 01:39:31] 2025-06-06 05:39:09,927 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 01:39:31] 2025-06-06 05:39:10,940 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-06 01:39:31] 2025-06-06 05:39:10,940 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677676320/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 01:39:31] 2025-06-06 05:39:10,941 | INFO     | extracted standard info from prmon json
[2025-06-06 01:39:31] 2025-06-06 05:39:10,941 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 01:39:31] 2025-06-06 05:39:10,941 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 01:39:31] 2025-06-06 05:39:10,942 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 01:39:31] 2025-06-06 05:39:10,942 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 01:39:31] 2025-06-06 05:39:10,945 | INFO     | fitting pss+swap vs Time
[2025-06-06 01:39:31] 2025-06-06 05:39:10,945 | INFO     | sum of square deviations: 233654283.6043954
[2025-06-06 01:39:31] 2025-06-06 05:39:10,945 | INFO     | sum of deviations: -5520169400.362636
[2025-06-06 01:39:31] 2025-06-06 05:39:10,946 | INFO     | mean x: 1749185455.0659342
[2025-06-06 01:39:31] 2025-06-06 05:39:10,946 | INFO     | mean y: 2386085.5604395606
[2025-06-06 01:39:31] 2025-06-06 05:39:10,946 | INFO     | -- intersect: 41327543389.17223
[2025-06-06 01:39:31] 2025-06-06 05:39:10,946 | INFO     | intersect: 41327543389.17223
[2025-06-06 01:39:31] 2025-06-06 05:39:10,946 | INFO     | chi2: 0.139132804754937
[2025-06-06 01:39:31] 2025-06-06 05:39:10,946 | INFO     | -- intersect: 41327543389.17223
[2025-06-06 01:39:31] 2025-06-06 05:39:10,946 | INFO     | current memory leak: -23.63 B/s (using 91 data points, chi2=0.14)
[2025-06-06 01:39:31] 2025-06-06 05:39:10,947 | INFO     | ..............................
[2025-06-06 01:39:31] 2025-06-06 05:39:10,947 | INFO     | . Timing measurements:
[2025-06-06 01:39:31] 2025-06-06 05:39:10,947 | INFO     | . get job = 0 s
[2025-06-06 01:39:31] 2025-06-06 05:39:10,947 | INFO     | . initial setup = 3 s
[2025-06-06 01:39:31] 2025-06-06 05:39:10,947 | INFO     | . payload setup = 13 s
[2025-06-06 01:39:31] 2025-06-06 05:39:10,947 | INFO     | . stage-in = 0 s
[2025-06-06 01:39:31] 2025-06-06 05:39:10,948 | INFO     | . payload execution = 5944 s
[2025-06-06 01:39:31] 2025-06-06 05:39:10,948 | INFO     | . stage-out = 0 s
[2025-06-06 01:39:31] 2025-06-06 05:39:10,948 | INFO     | . log creation = 0 s
[2025-06-06 01:39:31] 2025-06-06 05:39:10,948 | INFO     | ..............................
[2025-06-06 01:39:31] 2025-06-06 05:39:11,204 | INFO     | 
[2025-06-06 01:39:31] 2025-06-06 05:39:11,205 | INFO     | job summary report
[2025-06-06 01:39:31] 2025-06-06 05:39:11,205 | INFO     | --------------------------------------------------
[2025-06-06 01:39:31] 2025-06-06 05:39:11,205 | INFO     | PanDA job id: 6677676320
[2025-06-06 01:39:31] 2025-06-06 05:39:11,205 | INFO     | task id: 45006595
[2025-06-06 01:39:31] 2025-06-06 05:39:11,205 | INFO     | errors: (none)
[2025-06-06 01:39:31] 2025-06-06 05:39:11,205 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 01:39:31] 2025-06-06 05:39:11,205 | INFO     | pilot state: finished 
[2025-06-06 01:39:31] 2025-06-06 05:39:11,205 | INFO     | transexitcode: 0
[2025-06-06 01:39:31] 2025-06-06 05:39:11,205 | INFO     | exeerrorcode: 0
[2025-06-06 01:39:31] 2025-06-06 05:39:11,205 | INFO     | exeerrordiag: 
[2025-06-06 01:39:31] 2025-06-06 05:39:11,205 | INFO     | exitcode: 0
[2025-06-06 01:39:31] 2025-06-06 05:39:11,205 | INFO     | exitmsg: OK
[2025-06-06 01:39:31] 2025-06-06 05:39:11,206 | INFO     | cpuconsumptiontime: 36418 s
[2025-06-06 01:39:31] 2025-06-06 05:39:11,206 | INFO     | nevents: 400
[2025-06-06 01:39:31] 2025-06-06 05:39:11,206 | INFO     | neventsw: 0
[2025-06-06 01:39:31] 2025-06-06 05:39:11,206 | INFO     | pid: 3399218
[2025-06-06 01:39:31] 2025-06-06 05:39:11,206 | INFO     | pgrp: 3399218
[2025-06-06 01:39:31] 2025-06-06 05:39:11,206 | INFO     | corecount: 12
[2025-06-06 01:39:31] 2025-06-06 05:39:11,206 | INFO     | event service: False
[2025-06-06 01:39:31] 2025-06-06 05:39:11,206 | INFO     | sizes: {0: 2397171, 1: 2397370, 11: 2397576, 12: 2397604, 5961: 2424320, 5962: 2433261, 5966: 2433445, 5970: 2433615}
[2025-06-06 01:39:31] 2025-06-06 05:39:11,206 | INFO     | --------------------------------------------------
[2025-06-06 01:39:31] 2025-06-06 05:39:11,206 | INFO     | 
[2025-06-06 01:39:31] 2025-06-06 05:39:11,206 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 01:39:31] 2025-06-06 05:39:11,228 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 01:39:31] 2025-06-06 05:39:11,229 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 01:39:31] 2025-06-06 05:39:11,229 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 01:39:31] 2025-06-06 05:39:11,229 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 01:39:31] 2025-06-06 05:39:11,229 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 01:39:31] 2025-06-06 05:39:11,229 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 01:39:31] 2025-06-06 05:39:11,229 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 01:39:31] 2025-06-06 05:39:11,229 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 01:39:31] 2025-06-06 05:39:11,229 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 01:39:31] 2025-06-06 05:39:11,229 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 01:39:31] 2025-06-06 05:39:11,229 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 01:39:31] 2025-06-06 05:39:11,229 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 01:39:31] 2025-06-06 05:39:11,229 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 01:39:31] 2025-06-06 05:39:11,230 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 01:39:31] 2025-06-06 05:39:11,230 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 01:39:31] 2025-06-06 05:39:11,230 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 01:39:31] 2025-06-06 05:39:11,230 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 01:39:31] 2025-06-06 05:39:11,230 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 01:39:31] 2025-06-06 05:39:11,230 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 01:39:31] 2025-06-06 05:39:11,230 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 01:39:31] 2025-06-06 05:39:11,230 | INFO     | job 6677676320 has completed (purged errors)
[2025-06-06 01:39:31] 2025-06-06 05:39:11,230 | INFO     | overall cleanup function is called
[2025-06-06 01:39:31] 2025-06-06 05:39:12,239 | INFO     | --- collectZombieJob: --- 10, [3399218]
[2025-06-06 01:39:31] 2025-06-06 05:39:12,239 | INFO     | zombie collector waiting for pid 3399218
[2025-06-06 01:39:31] 2025-06-06 05:39:12,239 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 01:39:31] 2025-06-06 05:39:12,239 | INFO     | collected zombie processes
[2025-06-06 01:39:31] 2025-06-06 05:39:12,239 | INFO     | will attempt to kill all subprocesses of pid=3399218
[2025-06-06 01:39:31] 2025-06-06 05:39:12,486 | INFO     | process IDs to be killed: [3399218] (in reverse order)
[2025-06-06 01:39:31] 2025-06-06 05:39:12,578 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 01:39:31] 2025-06-06 05:39:12,579 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 01:39:31] 2025-06-06 05:39:12,590 | INFO     | did not find any defunct processes belonging to 3399218
[2025-06-06 01:39:31] 2025-06-06 05:39:12,601 | INFO     | did not find any defunct processes belonging to 3399218
[2025-06-06 01:39:31] 2025-06-06 05:39:12,602 | INFO     | ready for new job
[2025-06-06 01:39:31] 2025-06-06 05:39:12,602 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 01:39:31] 2025-06-06 05:39:12,604 | INFO     | **************************************
[2025-06-06 01:39:31] 2025-06-06 05:39:12,604 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 01:39:31] 2025-06-06 05:39:12,604 | INFO     | **************************************
[2025-06-06 01:39:31] 2025-06-06 05:39:12,604 | INFO     | 
[2025-06-06 01:39:31] 2025-06-06 05:39:12,620 | INFO     | architecture information:
[2025-06-06 01:39:31] 2025-06-06 05:39:12,620 | INFO     | executing command: cat /etc/os-release
[2025-06-06 01:39:31] 2025-06-06 05:39:12,634 | INFO     | cat /etc/os-release:
[2025-06-06 01:39:31] NAME="CentOS Linux"
[2025-06-06 01:39:31] VERSION="7 (Core)"
[2025-06-06 01:39:31] ID="centos"
[2025-06-06 01:39:31] ID_LIKE="rhel fedora"
[2025-06-06 01:39:31] VERSION_ID="7"
[2025-06-06 01:39:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 01:39:31] ANSI_COLOR="0;31"
[2025-06-06 01:39:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 01:39:31] HOME_URL="https://www.centos.org/"
[2025-06-06 01:39:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 01:39:31] 
[2025-06-06 01:39:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 01:39:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 01:39:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 01:39:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 01:39:31] 
[2025-06-06 01:39:31] 2025-06-06 05:39:12,635 | INFO     | **************************************
[2025-06-06 01:39:31] 2025-06-06 05:39:13,138 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 01:39:31] 2025-06-06 05:39:13,157 | INFO     | sufficient remaining disk space (76584845312 B)
[2025-06-06 01:39:31] 2025-06-06 05:39:13,158 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 01:39:31] 2025-06-06 05:39:13,159 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 01:39:31] 2025-06-06 05:39:13,159 | INFO     | update_server=False
[2025-06-06 01:39:31] 2025-06-06 05:39:13,159 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 01:39:31] 2025-06-06 05:39:13,160 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 01:39:31] 2025-06-06 05:39:13,160 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 01:39:31] 2025-06-06 05:39:13,161 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 01:39:31] 2025-06-06 05:39:13,161 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 01:39:31] 2025-06-06 05:39:13,161 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 01:39:31] 2025-06-06 05:39:13,266 | INFO     | all payload control threads have been joined
[2025-06-06 01:39:31] 2025-06-06 05:39:13,434 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 01:39:31] 2025-06-06 05:39:13,435 | INFO     | aborting loop
[2025-06-06 01:39:31] 2025-06-06 05:39:13,667 | INFO     | all data control threads have been joined
[2025-06-06 01:39:31] 2025-06-06 05:39:13,706 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 01:39:31] 2025-06-06 05:39:14,165 | INFO     | [job] retrieve thread has finished
[2025-06-06 01:39:31] 2025-06-06 05:39:14,271 | INFO     | [payload] control thread has finished
[2025-06-06 01:39:31] 2025-06-06 05:39:14,415 | INFO     | [payload] validate_post thread has finished
[2025-06-06 01:39:31] 2025-06-06 05:39:14,440 | INFO     | [job] job monitor thread has finished
[2025-06-06 01:39:31] 2025-06-06 05:39:14,539 | INFO     | [payload] failed_post thread has finished
[2025-06-06 01:39:31] 2025-06-06 05:39:14,581 | INFO     | all job control threads have been joined
[2025-06-06 01:39:31] 2025-06-06 05:39:14,657 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 01:39:31] 2025-06-06 05:39:14,673 | INFO     | [data] control thread has finished
[2025-06-06 01:39:31] 2025-06-06 05:39:14,694 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 01:39:31] 2025-06-06 05:39:14,880 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 01:39:31] 2025-06-06 05:39:14,938 | INFO     | [data] copytool_in thread has finished
[2025-06-06 01:39:31] 2025-06-06 05:39:15,378 | INFO     | [job] validate thread has finished
[2025-06-06 01:39:31] 2025-06-06 05:39:15,586 | INFO     | [job] control thread has finished
[2025-06-06 01:39:31] 2025-06-06 05:39:15,712 | INFO     | [data] copytool_out thread has finished
[2025-06-06 01:39:31] 2025-06-06 05:39:16,043 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 01:39:31] 2025-06-06 05:39:17,048 | INFO     | [job] queue monitor thread has finished
[2025-06-06 01:39:31] 2025-06-06 05:39:17,166 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 01:39:31] 2025-06-06 05:39:23,889 | INFO     | job.realtimelogging is not enabled
[2025-06-06 01:39:31] 2025-06-06 05:39:24,894 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 01:39:31] 2025-06-06 05:39:26,430 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140674487973696)>', '<ExcThread(monitor, started 140674215155456)>']
[2025-06-06 01:39:31] 2025-06-06 05:39:27,230 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 01:39:31] 2025-06-06 05:39:27,231 | INFO     | [monitor] control thread has ended
[2025-06-06 01:39:31] 2025-06-06 05:39:31,447 | INFO     | all workflow threads have been joined
[2025-06-06 01:39:31] 2025-06-06 05:39:31,448 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 01:39:31] 2025-06-06 05:39:31,448 | INFO     | traces error code: 0
[2025-06-06 01:39:31] 2025-06-06 05:39:31,449 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 01:39:31] 2025-06-06 05:39:31,651 [wrapper] ==== pilot stdout END ====
[2025-06-06 01:39:31] 2025-06-06 05:39:31,654 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 01:39:31] 2025-06-06 05:39:31,657 [wrapper] pilotpid: 3392828
[2025-06-06 01:39:31] 2025-06-06 05:39:31,660 [wrapper] Pilot exit status: 0
[2025-06-06 01:39:31] 2025-06-06 05:39:31,672 [wrapper] pandaids: 6677676320
[2025-06-06 01:39:31] 2025-06-06 05:39:31,735 [wrapper] cleanup supervisor_pilot 3765942 3392829
[2025-06-06 01:39:31] 2025-06-06 05:39:31,740 [wrapper] Test setup, not cleaning
[2025-06-06 01:39:31] 2025-06-06 05:39:31,744 [wrapper] apfmon messages muted
[2025-06-06 01:39:31] 2025-06-06 05:39:31,747 [wrapper] ==== wrapper stdout END ====
[2025-06-06 01:39:31] 2025-06-06 05:39:31,750 [wrapper] ==== wrapper stderr END ====
[2025-06-06 01:39:31]  *** Error codes and diagnostics ***
[2025-06-06 01:39:31]     "exeErrorCode": 0,
[2025-06-06 01:39:31]     "exeErrorDiag": "",
[2025-06-06 01:39:31]     "pilotErrorCode": 0,
[2025-06-06 01:39:31]     "pilotErrorDiag": "",
[2025-06-06 01:39:31]  *** Listing of results directory ***
[2025-06-06 01:39:31] total 391760
[2025-06-06 01:39:31] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 10:52 pilot3.tar.gz
[2025-06-06 01:39:31] -rwx------. 1 boincer umatlas     37140 Jun  3 11:02 runpilot2-wrapper.sh
[2025-06-06 01:39:31] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 11:02 queuedata.json
[2025-06-06 01:39:31] -rw-r--r--. 1 boincer umatlas       100 Jun  5 23:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 01:39:31] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 23:58 run_atlas
[2025-06-06 01:39:31] -rw-r--r--. 1 boincer umatlas       105 Jun  5 23:58 job.xml
[2025-06-06 01:39:31] -rw-r--r--. 2 boincer umatlas 214319140 Jun  5 23:58 EVNT.45006593._001464.pool.root.1
[2025-06-06 01:39:31] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 23:58 start_atlas.sh
[2025-06-06 01:39:31] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 23:58 shared
[2025-06-06 01:39:31] -rw-r--r--. 2 boincer umatlas    508874 Jun  5 23:58 input.tar.gz
[2025-06-06 01:39:31] -rw-r--r--. 1 boincer umatlas         0 Jun  5 23:58 boinc_lockfile
[2025-06-06 01:39:31] -rw-r--r--. 1 boincer umatlas      2525 Jun  5 23:58 pandaJob.out
[2025-06-06 01:39:31] -rw-------. 1 boincer umatlas    987721 Jun  5 23:59 agis_schedconf.cvmfs.json
[2025-06-06 01:39:31] -rw-------. 1 boincer umatlas   1598969 Jun  5 23:59 agis_ddmendpoints.agis.ALL.json
[2025-06-06 01:39:31] drwx------. 4 boincer umatlas      4096 Jun  5 23:59 pilot3
[2025-06-06 01:39:31] -rw-r--r--. 1 boincer umatlas      6841 Jun  6 01:30 init_data.xml
[2025-06-06 01:39:31] -rw-------. 1 boincer umatlas 181112389 Jun  6 01:38 HITS.45006595._036444.pool.root.1
[2025-06-06 01:39:31] -rw-r--r--. 1 boincer umatlas       529 Jun  6 01:38 boinc_task_state.xml
[2025-06-06 01:39:31] -rw-------. 1 boincer umatlas      1042 Jun  6 01:38 memory_monitor_summary.json
[2025-06-06 01:39:31] -rw-------. 1 boincer umatlas    385053 Jun  6 01:39 log.45006595._036444.job.log.tgz.1
[2025-06-06 01:39:31] -rw-------. 1 boincer umatlas        95 Jun  6 01:39 pilot_heartbeat.json
[2025-06-06 01:39:31] -rw-------. 1 boincer umatlas      7723 Jun  6 01:39 heartbeat.json
[2025-06-06 01:39:31] -rw-r--r--. 1 boincer umatlas        27 Jun  6 01:39 wrapper_checkpoint.txt
[2025-06-06 01:39:31] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 01:39 boinc_mmap_file
[2025-06-06 01:39:31] -rw-------. 1 boincer umatlas      4548 Jun  6 01:39 pilotlog.txt
[2025-06-06 01:39:31] -rw-------. 1 boincer umatlas    562876 Jun  6 01:39 log.45006595._036444.job.log.1
[2025-06-06 01:39:31] -rw-------. 1 boincer umatlas       357 Jun  6 01:39 output.list
[2025-06-06 01:39:31] -rw-r--r--. 1 boincer umatlas       620 Jun  6 01:39 runtime_log
[2025-06-06 01:39:31] -rw-------. 1 boincer umatlas    962560 Jun  6 01:39 result.tar.gz
[2025-06-06 01:39:31] -rw-r--r--. 1 boincer umatlas      8666 Jun  6 01:39 runtime_log.err
[2025-06-06 01:39:31] -rw-------. 1 boincer umatlas       654 Jun  6 01:39 qfoLDmOLig7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmAjkKDmIGwEzn.diag
[2025-06-06 01:39:31] -rw-r--r--. 1 boincer umatlas     21600 Jun  6 01:39 stderr.txt
[2025-06-06 01:39:31] HITS file was successfully produced:
[2025-06-06 01:39:31] -rw-------. 1 boincer umatlas 181112389 Jun  6 01:38 shared/HITS.pool.root.1
[2025-06-06 01:39:31]  *** Contents of shared directory: ***
[2025-06-06 01:39:31] total 387632
[2025-06-06 01:39:31] -rw-r--r--. 2 boincer umatlas 214319140 Jun  5 23:58 ATLAS.root_0
[2025-06-06 01:39:31] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 23:58 start_atlas.sh
[2025-06-06 01:39:31] -rw-r--r--. 2 boincer umatlas    508874 Jun  5 23:58 input.tar.gz
[2025-06-06 01:39:31] -rw-------. 1 boincer umatlas 181112389 Jun  6 01:38 HITS.pool.root.1
[2025-06-06 01:39:31] -rw-------. 1 boincer umatlas    962560 Jun  6 01:39 result.tar.gz
01:39:33 (3387839): run_atlas exited; CPU time 36490.554179
01:39:33 (3387839): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN