Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:27:41 (21218): wrapper (7.7.26015): starting
05:27:41 (21218): wrapper: running run_atlas (--nthreads 8)
[2025-06-06 05:27:41] Arguments: --nthreads 8
[2025-06-06 05:27:41] Threads: 8
[2025-06-06 05:27:41] Checking for CVMFS
[2025-06-06 05:27:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 05:27:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 05:27:41] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 05:27:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 05:27:41] 2.11.2.0 13026 35674 90308 146842 2 165 13049716 25165824 2957 130560 0 18450069 99.842 21373439 2989 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-06 05:27:41] CVMFS is ok
[2025-06-06 05:27:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 05:27:41] Checking for apptainer binary...
[2025-06-06 05:27:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 05:27:41] Running /usr/bin/apptainer --version
[2025-06-06 05:27:42] apptainer version 1.3.2-1.el7
[2025-06-06 05:27:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 05:27:43] cg-vwn329.simple-grid.lan
[2025-06-06 05:27:43] apptainer works
[2025-06-06 05:27:43] Set ATHENA_PROC_NUMBER=8
[2025-06-06 05:27:43] Set ATHENA_CORE_NUMBER=8
[2025-06-06 05:27:43] Starting ATLAS job with PandaID=6667433485
[2025-06-06 05:27:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 10:52:01]  *** The last 200 lines of the pilot log: ***
[2025-06-06 10:52:01] 2025-06-06 08:51:43,247 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6667433485/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 10:52:01] 2025-06-06 08:51:43,248 | INFO     | extracted standard info from prmon json
[2025-06-06 10:52:01] 2025-06-06 08:51:43,248 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 10:52:01] 2025-06-06 08:51:43,248 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 10:52:01] 2025-06-06 08:51:43,249 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 10:52:01] 2025-06-06 08:51:43,249 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 10:52:01] 2025-06-06 08:51:43,256 | INFO     | fitting pss+swap vs Time
[2025-06-06 10:52:01] 2025-06-06 08:51:43,256 | INFO     | sum of square deviations: 9784425315.0
[2025-06-06 10:52:01] 2025-06-06 08:51:43,259 | INFO     | sum of deviations: -17894054363.5
[2025-06-06 10:52:01] 2025-06-06 08:51:43,260 | INFO     | mean x: 1749190174.5
[2025-06-06 10:52:01] 2025-06-06 08:51:43,260 | INFO     | mean y: 2505514.851265823
[2025-06-06 10:52:01] 2025-06-06 08:51:43,260 | INFO     | -- intersect: 3201477663.641494
[2025-06-06 10:52:01] 2025-06-06 08:51:43,260 | INFO     | intersect: 3201477663.641494
[2025-06-06 10:52:01] 2025-06-06 08:51:43,260 | INFO     | chi2: 2.9405333903424493
[2025-06-06 10:52:01] 2025-06-06 08:51:43,261 | INFO     | sum of square deviations: 9327281860.0
[2025-06-06 10:52:01] 2025-06-06 08:51:43,264 | INFO     | sum of deviations: 3988008284.9999957
[2025-06-06 10:52:01] 2025-06-06 08:51:43,264 | INFO     | mean x: 1749190022.0
[2025-06-06 10:52:01] 2025-06-06 08:51:43,265 | INFO     | mean y: 2512721.302250804
[2025-06-06 10:52:01] 2025-06-06 08:51:43,265 | INFO     | -- intersect: -745377650.671061
[2025-06-06 10:52:01] 2025-06-06 08:51:43,265 | INFO     | intersect: -745377650.671061
[2025-06-06 10:52:01] 2025-06-06 08:51:43,266 | INFO     | chi2: 2.116440696185428
[2025-06-06 10:52:01] 2025-06-06 08:51:43,266 | INFO     | current chi2=2.116440696185428 (change=28.025279252518505 %)
[2025-06-06 10:52:01] 2025-06-06 08:51:43,266 | INFO     | sum of square deviations: 8884603792.5
[2025-06-06 10:52:01] 2025-06-06 08:51:43,269 | INFO     | sum of deviations: 3716811983.999989
[2025-06-06 10:52:01] 2025-06-06 08:51:43,270 | INFO     | mean x: 1749189869.5
[2025-06-06 10:52:01] 2025-06-06 08:51:43,270 | INFO     | mean y: 2512627.8692810456
[2025-06-06 10:52:01] 2025-06-06 08:51:43,270 | INFO     | -- intersect: -729248745.0731102
[2025-06-06 10:52:01] 2025-06-06 08:51:43,270 | INFO     | intersect: -729248745.0731102
[2025-06-06 10:52:01] 2025-06-06 08:51:43,270 | INFO     | chi2: 2.11634635051219
[2025-06-06 10:52:01] 2025-06-06 08:51:43,270 | INFO     | current chi2=2.11634635051219 (change=0.004457751800364366 %)
[2025-06-06 10:52:01] 2025-06-06 08:51:43,271 | INFO     | right removable region: 305
[2025-06-06 10:52:01] 2025-06-06 08:51:43,271 | INFO     | sum of square deviations: 9327281860.0
[2025-06-06 10:52:01] 2025-06-06 08:51:43,274 | INFO     | sum of deviations: -78651485332.0
[2025-06-06 10:52:01] 2025-06-06 08:51:43,274 | INFO     | mean x: 1749190327.0
[2025-06-06 10:52:01] 2025-06-06 08:51:43,274 | INFO     | mean y: 2525673.733118971
[2025-06-06 10:52:01] 2025-06-06 08:51:43,275 | INFO     | -- intersect: 14752419524.042559
[2025-06-06 10:52:01] 2025-06-06 08:51:43,275 | INFO     | intersect: 14752419524.042559
[2025-06-06 10:52:01] 2025-06-06 08:51:43,275 | INFO     | chi2: 1.1172501336491898
[2025-06-06 10:52:01] 2025-06-06 08:51:43,275 | INFO     | current chi2=1.1172501336491898 (change=62.00518799349267 %)
[2025-06-06 10:52:01] 2025-06-06 08:51:43,276 | INFO     | sum of square deviations: 8884603792.5
[2025-06-06 10:52:01] 2025-06-06 08:51:43,279 | INFO     | sum of deviations: -81558242447.99998
[2025-06-06 10:52:01] 2025-06-06 08:51:43,279 | INFO     | mean x: 1749190479.5
[2025-06-06 10:52:01] 2025-06-06 08:51:43,279 | INFO     | mean y: 2526661.732026144
[2025-06-06 10:52:01] 2025-06-06 08:51:43,279 | INFO     | -- intersect: 16059618744.467617
[2025-06-06 10:52:01] 2025-06-06 08:51:43,279 | INFO     | intersect: 16059618744.467617
[2025-06-06 10:52:01] 2025-06-06 08:51:43,280 | INFO     | chi2: 1.094534341486086
[2025-06-06 10:52:01] 2025-06-06 08:51:43,280 | INFO     | current chi2=1.094534341486086 (change=2.0331876881418616 %)
[2025-06-06 10:52:01] 2025-06-06 08:51:43,280 | INFO     | left removable region: 20
[2025-06-06 10:52:01] 2025-06-06 08:51:43,281 | INFO     | sum of square deviations: 7178069470.0
[2025-06-06 10:52:01] 2025-06-06 08:51:43,283 | INFO     | sum of deviations: -40296819295.000015
[2025-06-06 10:52:01] 2025-06-06 08:51:43,284 | INFO     | mean x: 1749190449.0
[2025-06-06 10:52:01] 2025-06-06 08:51:43,284 | INFO     | mean y: 2527678.4631578946
[2025-06-06 10:52:01] 2025-06-06 08:51:43,284 | INFO     | -- intersect: 9822272629.453852
[2025-06-06 10:52:01] 2025-06-06 08:51:43,284 | INFO     | intersect: 9822272629.453852
[2025-06-06 10:52:01] 2025-06-06 08:51:43,285 | INFO     | chi2: 0.21467268530178443
[2025-06-06 10:52:01] 2025-06-06 08:51:43,285 | INFO     | -- intersect: 9822272629.453852
[2025-06-06 10:52:01] 2025-06-06 08:51:43,285 | INFO     | current memory leak: -5.61 B/s (using 285 data points, chi2=0.21)
[2025-06-06 10:52:01] 2025-06-06 08:51:43,286 | INFO     | ..............................
[2025-06-06 10:52:01] 2025-06-06 08:51:43,286 | INFO     | . Timing measurements:
[2025-06-06 10:52:01] 2025-06-06 08:51:43,286 | INFO     | . get job = 0 s
[2025-06-06 10:52:01] 2025-06-06 08:51:43,286 | INFO     | . initial setup = 5 s
[2025-06-06 10:52:01] 2025-06-06 08:51:43,286 | INFO     | . payload setup = 24 s
[2025-06-06 10:52:01] 2025-06-06 08:51:43,286 | INFO     | . stage-in = 0 s
[2025-06-06 10:52:01] 2025-06-06 08:51:43,287 | INFO     | . payload execution = 19255 s
[2025-06-06 10:52:01] 2025-06-06 08:51:43,287 | INFO     | . stage-out = 4 s
[2025-06-06 10:52:01] 2025-06-06 08:51:43,287 | INFO     | . log creation = 1 s
[2025-06-06 10:52:01] 2025-06-06 08:51:43,287 | INFO     | ..............................
[2025-06-06 10:52:01] 2025-06-06 08:51:43,667 | INFO     | 
[2025-06-06 10:52:01] 2025-06-06 08:51:43,667 | INFO     | job summary report
[2025-06-06 10:52:01] 2025-06-06 08:51:43,667 | INFO     | --------------------------------------------------
[2025-06-06 10:52:01] 2025-06-06 08:51:43,667 | INFO     | PanDA job id: 6667433485
[2025-06-06 10:52:01] 2025-06-06 08:51:43,667 | INFO     | task id: 44871837
[2025-06-06 10:52:01] 2025-06-06 08:51:43,667 | INFO     | errors: (none)
[2025-06-06 10:52:01] 2025-06-06 08:51:43,667 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 10:52:01] 2025-06-06 08:51:43,668 | INFO     | pilot state: finished 
[2025-06-06 10:52:01] 2025-06-06 08:51:43,668 | INFO     | transexitcode: 0
[2025-06-06 10:52:01] 2025-06-06 08:51:43,668 | INFO     | exeerrorcode: 0
[2025-06-06 10:52:01] 2025-06-06 08:51:43,668 | INFO     | exeerrordiag: 
[2025-06-06 10:52:01] 2025-06-06 08:51:43,668 | INFO     | exitcode: 0
[2025-06-06 10:52:01] 2025-06-06 08:51:43,668 | INFO     | exitmsg: OK
[2025-06-06 10:52:01] 2025-06-06 08:51:43,668 | INFO     | cpuconsumptiontime: 71960 s
[2025-06-06 10:52:01] 2025-06-06 08:51:43,668 | INFO     | nevents: 400
[2025-06-06 10:52:01] 2025-06-06 08:51:43,668 | INFO     | neventsw: 0
[2025-06-06 10:52:01] 2025-06-06 08:51:43,668 | INFO     | pid: 6592
[2025-06-06 10:52:01] 2025-06-06 08:51:43,668 | INFO     | pgrp: 6592
[2025-06-06 10:52:01] 2025-06-06 08:51:43,669 | INFO     | corecount: 8
[2025-06-06 10:52:01] 2025-06-06 08:51:43,669 | INFO     | event service: False
[2025-06-06 10:52:01] 2025-06-06 08:51:43,669 | INFO     | sizes: {0: 2396562, 1: 2397247, 2: 2397446, 11: 2397652, 12: 2397680, 19284: 2429714, 19285: 2429841, 19291: 2438838, 19293: 2438894, 19386: 2439064}
[2025-06-06 10:52:01] 2025-06-06 08:51:43,669 | INFO     | --------------------------------------------------
[2025-06-06 10:52:01] 2025-06-06 08:51:43,669 | INFO     | 
[2025-06-06 10:52:01] 2025-06-06 08:51:43,669 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-06 10:52:01] 2025-06-06 08:51:43,924 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 10:52:01] 2025-06-06 08:51:43,925 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 10:52:01] 2025-06-06 08:51:43,925 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 10:52:01] 2025-06-06 08:51:43,925 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 10:52:01] 2025-06-06 08:51:43,925 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 10:52:01] 2025-06-06 08:51:43,925 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 10:52:01] 2025-06-06 08:51:43,925 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 10:52:01] 2025-06-06 08:51:43,925 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 10:52:01] 2025-06-06 08:51:43,925 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 10:52:01] 2025-06-06 08:51:43,926 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 10:52:01] 2025-06-06 08:51:43,926 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 10:52:01] 2025-06-06 08:51:43,926 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 10:52:01] 2025-06-06 08:51:43,926 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 10:52:01] 2025-06-06 08:51:43,926 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 10:52:01] 2025-06-06 08:51:43,926 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 10:52:01] 2025-06-06 08:51:43,926 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 10:52:01] 2025-06-06 08:51:43,926 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 10:52:01] 2025-06-06 08:51:43,926 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 10:52:01] 2025-06-06 08:51:43,926 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 10:52:01] 2025-06-06 08:51:43,926 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 10:52:01] 2025-06-06 08:51:43,927 | INFO     | job 6667433485 has completed (purged errors)
[2025-06-06 10:52:01] 2025-06-06 08:51:43,927 | INFO     | overall cleanup function is called
[2025-06-06 10:52:01] 2025-06-06 08:51:44,937 | INFO     | --- collectZombieJob: --- 10, [6592]
[2025-06-06 10:52:01] 2025-06-06 08:51:44,937 | INFO     | zombie collector waiting for pid 6592
[2025-06-06 10:52:01] 2025-06-06 08:51:44,937 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 10:52:01] 2025-06-06 08:51:44,937 | INFO     | collected zombie processes
[2025-06-06 10:52:01] 2025-06-06 08:51:44,937 | INFO     | will attempt to kill all subprocesses of pid=6592
[2025-06-06 10:52:01] 2025-06-06 08:51:45,084 | INFO     | process IDs to be killed: [6592] (in reverse order)
[2025-06-06 10:52:01] 2025-06-06 08:51:46,023 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 10:52:01] 2025-06-06 08:51:46,023 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 10:52:01] 2025-06-06 08:51:46,027 | INFO     | did not find any defunct processes belonging to 6592
[2025-06-06 10:52:01] 2025-06-06 08:51:46,030 | INFO     | did not find any defunct processes belonging to 6592
[2025-06-06 10:52:01] 2025-06-06 08:51:46,030 | INFO     | ready for new job
[2025-06-06 10:52:01] 2025-06-06 08:51:46,030 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 10:52:01] 2025-06-06 08:51:46,033 | INFO     | **************************************
[2025-06-06 10:52:01] 2025-06-06 08:51:46,033 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 10:52:01] 2025-06-06 08:51:46,033 | INFO     | **************************************
[2025-06-06 10:52:01] 2025-06-06 08:51:46,033 | INFO     | 
[2025-06-06 10:52:01] 2025-06-06 08:51:46,034 | INFO     | pilot is running in a VM
[2025-06-06 10:52:01] 2025-06-06 08:51:46,034 | INFO     | architecture information:
[2025-06-06 10:52:01] 2025-06-06 08:51:46,050 | INFO     | executing command: cat /etc/os-release
[2025-06-06 10:52:01] 2025-06-06 08:51:46,346 | INFO     | cat /etc/os-release:
[2025-06-06 10:52:01] NAME="CentOS Linux"
[2025-06-06 10:52:01] VERSION="7 (Core)"
[2025-06-06 10:52:01] ID="centos"
[2025-06-06 10:52:01] ID_LIKE="rhel fedora"
[2025-06-06 10:52:01] VERSION_ID="7"
[2025-06-06 10:52:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 10:52:01] ANSI_COLOR="0;31"
[2025-06-06 10:52:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 10:52:01] HOME_URL="https://www.centos.org/"
[2025-06-06 10:52:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 10:52:01] 
[2025-06-06 10:52:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 10:52:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 10:52:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 10:52:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 10:52:01] 
[2025-06-06 10:52:01] 2025-06-06 08:51:46,347 | INFO     | **************************************
[2025-06-06 10:52:01] 2025-06-06 08:51:46,850 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-06 10:52:01] 2025-06-06 08:51:47,090 | INFO     | sufficient remaining disk space (441729417216 B)
[2025-06-06 10:52:01] 2025-06-06 08:51:47,090 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 10:52:01] 2025-06-06 08:51:47,090 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 10:52:01] 2025-06-06 08:51:47,090 | INFO     | update_server=False
[2025-06-06 10:52:01] 2025-06-06 08:51:47,090 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 10:52:01] 2025-06-06 08:51:47,092 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 10:52:01] 2025-06-06 08:51:47,094 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 10:52:01] 2025-06-06 08:51:47,302 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 10:52:01] 2025-06-06 08:51:47,302 | INFO     | aborting loop
[2025-06-06 10:52:01] 2025-06-06 08:51:47,392 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 10:52:01] 2025-06-06 08:51:47,392 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 10:52:01] 2025-06-06 08:51:47,392 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 10:52:01] 2025-06-06 08:51:47,565 | INFO     | all data control threads have been joined
[2025-06-06 10:52:01] 2025-06-06 08:51:47,755 | INFO     | all job control threads have been joined
[2025-06-06 10:52:01] 2025-06-06 08:51:48,097 | INFO     | [job] retrieve thread has finished
[2025-06-06 10:52:01] 2025-06-06 08:51:48,126 | INFO     | all payload control threads have been joined
[2025-06-06 10:52:01] 2025-06-06 08:51:48,247 | INFO     | [job] validate thread has finished
[2025-06-06 10:52:01] 2025-06-06 08:51:48,306 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 10:52:01] 2025-06-06 08:51:48,308 | INFO     | [job] job monitor thread has finished
[2025-06-06 10:52:01] 2025-06-06 08:51:48,443 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 10:52:01] 2025-06-06 08:51:48,475 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 10:52:01] 2025-06-06 08:51:48,571 | INFO     | [data] control thread has finished
[2025-06-06 10:52:01] 2025-06-06 08:51:48,762 | INFO     | [job] control thread has finished
[2025-06-06 10:52:01] 2025-06-06 08:51:48,882 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 10:52:01] 2025-06-06 08:51:48,916 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 10:52:01] 2025-06-06 08:51:48,923 | INFO     | [data] copytool_in thread has finished
[2025-06-06 10:52:01] 2025-06-06 08:51:49,101 | INFO     | [data] copytool_out thread has finished
[2025-06-06 10:52:01] 2025-06-06 08:51:49,129 | INFO     | [payload] validate_post thread has finished
[2025-06-06 10:52:01] 2025-06-06 08:51:49,132 | INFO     | [payload] control thread has finished
[2025-06-06 10:52:01] 2025-06-06 08:51:49,257 | INFO     | [payload] failed_post thread has finished
[2025-06-06 10:52:01] 2025-06-06 08:51:49,451 | INFO     | [job] queue monitor thread has finished
[2025-06-06 10:52:01] 2025-06-06 08:51:51,103 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 10:52:01] 2025-06-06 08:51:52,181 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139923512448832)>', '<ExcThread(monitor, started 139922694457088)>']
[2025-06-06 10:52:01] 2025-06-06 08:51:52,420 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 10:52:01] 2025-06-06 08:51:52,421 | INFO     | [monitor] control thread has ended
[2025-06-06 10:52:01] 2025-06-06 08:51:57,206 | INFO     | all workflow threads have been joined
[2025-06-06 10:52:01] 2025-06-06 08:51:57,206 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 10:52:01] 2025-06-06 08:51:57,206 | INFO     | traces error code: 0
[2025-06-06 10:52:01] 2025-06-06 08:51:57,207 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 10:52:01] 2025-06-06 08:51:57,529 [wrapper] ==== pilot stdout END ====
[2025-06-06 10:52:01] 2025-06-06 08:51:57,575 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 10:52:01] 2025-06-06 08:51:57,668 [wrapper] pilotpid: 25876
[2025-06-06 10:52:01] 2025-06-06 08:51:57,780 [wrapper] Pilot exit status: 0
[2025-06-06 10:52:01] 2025-06-06 08:51:58,071 [wrapper] pandaids: 6667433485
[2025-06-06 10:52:01] 2025-06-06 08:51:58,140 [wrapper] cleanup supervisor_pilot 20191 25877
[2025-06-06 10:52:01] 2025-06-06 08:51:58,218 [wrapper] Test setup, not cleaning
[2025-06-06 10:52:01] 2025-06-06 08:51:58,280 [wrapper] apfmon messages muted
[2025-06-06 10:52:01] 2025-06-06 08:51:58,363 [wrapper] ==== wrapper stdout END ====
[2025-06-06 10:52:01] 2025-06-06 08:51:58,508 [wrapper] ==== wrapper stderr END ====
[2025-06-06 10:52:01]  *** Error codes and diagnostics ***
[2025-06-06 10:52:01]     "exeErrorCode": 0,
[2025-06-06 10:52:01]     "exeErrorDiag": "",
[2025-06-06 10:52:01]     "pilotErrorCode": 0,
[2025-06-06 10:52:01]     "pilotErrorDiag": "",
[2025-06-06 10:52:01]  *** Listing of results directory ***
[2025-06-06 10:52:01] total 417692
[2025-06-06 10:52:01] -rw-r--r--. 1 boinc boinc      5111 May 27 20:35 queuedata.json
[2025-06-06 10:52:01] -rw-r--r--. 1 boinc boinc    495897 May 27 20:37 pilot3.tar.gz
[2025-06-06 10:52:01] -rwx------. 1 boinc boinc     37140 May 27 20:38 runpilot2-wrapper.sh
[2025-06-06 10:52:01] -rw-r--r--. 1 boinc boinc       100 Jun  6 05:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 10:52:01] -rwxr-xr-x. 1 boinc boinc      7986 Jun  6 05:27 run_atlas
[2025-06-06 10:52:01] -rw-r--r--. 1 boinc boinc       105 Jun  6 05:27 job.xml
[2025-06-06 10:52:01] -rw-r--r--. 2 boinc boinc 222131669 Jun  6 05:27 EVNT.44871834._002815.pool.root.1
[2025-06-06 10:52:01] -rw-r--r--. 2 boinc boinc    508874 Jun  6 05:27 input.tar.gz
[2025-06-06 10:52:01] -rw-r--r--. 1 boinc boinc      6391 Jun  6 05:27 init_data.xml
[2025-06-06 10:52:01] -rw-r--r--. 2 boinc boinc     15093 Jun  6 05:27 start_atlas.sh
[2025-06-06 10:52:01] drwxrwx--x. 2 boinc boinc        68 Jun  6 05:27 shared
[2025-06-06 10:52:01] -rw-r--r--. 1 boinc boinc         0 Jun  6 05:27 boinc_lockfile
[2025-06-06 10:52:01] -rw-r--r--. 1 boinc boinc      2558 Jun  6 05:27 pandaJob.out
[2025-06-06 10:52:01] -rw-------. 1 boinc boinc    987721 Jun  6 05:28 agis_schedconf.cvmfs.json
[2025-06-06 10:52:01] drwx------. 4 boinc boinc      4096 Jun  6 05:28 pilot3
[2025-06-06 10:52:01] -rw-------. 1 boinc boinc 197595686 Jun  6 10:49 HITS.44871837._071709.pool.root.1
[2025-06-06 10:52:01] -rw-r--r--. 1 boinc boinc       531 Jun  6 10:49 boinc_task_state.xml
[2025-06-06 10:52:01] -rw-------. 1 boinc boinc      1015 Jun  6 10:49 memory_monitor_summary.json
[2025-06-06 10:52:01] -rw-------. 1 boinc boinc   1598969 Jun  6 10:50 agis_ddmendpoints.agis.ALL.json
[2025-06-06 10:52:01] -rw-------. 1 boinc boinc    416799 Jun  6 10:50 log.44871837._071709.job.log.tgz.1
[2025-06-06 10:52:01] -rw-------. 1 boinc boinc        95 Jun  6 10:51 pilot_heartbeat.json
[2025-06-06 10:52:01] -rw-------. 1 boinc boinc      7687 Jun  6 10:51 heartbeat.json
[2025-06-06 10:52:01] -rw-------. 1 boinc boinc      4416 Jun  6 10:51 pilotlog.txt
[2025-06-06 10:52:01] -rw-------. 1 boinc boinc   1665657 Jun  6 10:51 log.44871837._071709.job.log.1
[2025-06-06 10:52:01] -rw-r--r--. 1 boinc boinc      8192 Jun  6 10:51 boinc_mmap_file
[2025-06-06 10:52:01] -rw-------. 1 boinc boinc       357 Jun  6 10:52 output.list
[2025-06-06 10:52:01] -rw-r--r--. 1 boinc boinc        28 Jun  6 10:52 wrapper_checkpoint.txt
[2025-06-06 10:52:01] -rw-r--r--. 1 boinc boinc       620 Jun  6 10:52 runtime_log
[2025-06-06 10:52:01] -rw-------. 1 boinc boinc   2099200 Jun  6 10:52 result.tar.gz
[2025-06-06 10:52:01] -rw-r--r--. 1 boinc boinc      8659 Jun  6 10:52 runtime_log.err
[2025-06-06 10:52:01] -rw-------. 1 boinc boinc       658 Jun  6 10:52 N2bLDmeNEe7n9Rq4apOajLDm4fhM0noT9bVof3QYDm6ESKDmCq62Nn.diag
[2025-06-06 10:52:01] -rw-r--r--. 1 boinc boinc     20502 Jun  6 10:52 stderr.txt
[2025-06-06 10:52:01] HITS file was successfully produced:
[2025-06-06 10:52:01] -rw-------. 1 boinc boinc 197595686 Jun  6 10:49 shared/HITS.pool.root.1
[2025-06-06 10:52:01]  *** Contents of shared directory: ***
[2025-06-06 10:52:01] total 412464
[2025-06-06 10:52:01] -rw-r--r--. 2 boinc boinc 222131669 Jun  6 05:27 ATLAS.root_0
[2025-06-06 10:52:01] -rw-r--r--. 2 boinc boinc    508874 Jun  6 05:27 input.tar.gz
[2025-06-06 10:52:01] -rw-r--r--. 2 boinc boinc     15093 Jun  6 05:27 start_atlas.sh
[2025-06-06 10:52:01] -rw-------. 1 boinc boinc 197595686 Jun  6 10:49 HITS.pool.root.1
[2025-06-06 10:52:01] -rw-------. 1 boinc boinc   2099200 Jun  6 10:52 result.tar.gz
10:52:02 (21218): run_atlas exited; CPU time 72205.768352
10:52:02 (21218): called boinc_finish(0)

</stderr_txt>
]]>

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