Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:21:01 (1123410): wrapper (7.7.26015): starting
23:21:01 (1123410): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 23:21:01] Arguments: --nthreads 8
[2025-06-05 23:21:01] Threads: 8
[2025-06-05 23:21:01] Checking for CVMFS
[2025-06-05 23:21:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 23:21:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 23:21:01] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 23:21:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 23:21:01] 2.12.6.0 1817818 25617 437104 146842 0 258 31947652 40960001 12714 16776704 1 121763192 99.711 98087708 19579 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 23:21:01] CVMFS is ok
[2025-06-05 23:21:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 23:21:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 23:21:01] Further information can be found at the LHC@home message board.
[2025-06-05 23:21:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 23:21:01] Checking for apptainer binary...
[2025-06-05 23:21:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 23:21:01] Running /usr/bin/apptainer --version
[2025-06-05 23:21:01] apptainer version 1.4.1-1.el9
[2025-06-05 23:21:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 23:21:01] c7-11-12.aglt2.org
[2025-06-05 23:21:01] apptainer works
[2025-06-05 23:21:01] Set ATHENA_PROC_NUMBER=8
[2025-06-05 23:21:01] Set ATHENA_CORE_NUMBER=8
[2025-06-05 23:21:01] Starting ATLAS job with PandaID=6669233857
[2025-06-05 23:21:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 02:03:11]  *** The last 200 lines of the pilot log: ***
[2025-06-06 02:03:11] 2025-06-06 06:02:50,936 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6669233857/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 02:03:11] 2025-06-06 06:02:51,204 | INFO     | number of running child processes to parent process 1141353: 1
[2025-06-06 02:03:11] 2025-06-06 06:02:51,204 | INFO     | maximum number of monitored processes: 6
[2025-06-06 02:03:11] 2025-06-06 06:02:53,707 | INFO     | monitor loop #682: job 0:6669233857 is in state 'finished'
[2025-06-06 02:03:11] 2025-06-06 06:02:53,707 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 02:03:11] 2025-06-06 06:02:53,969 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 02:03:11] 2025-06-06 06:02:53,969 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6669233857/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 02:03:11] 2025-06-06 06:02:53,970 | INFO     | extracted standard info from prmon json
[2025-06-06 02:03:11] 2025-06-06 06:02:53,970 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 02:03:11] 2025-06-06 06:02:53,970 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 02:03:11] 2025-06-06 06:02:53,970 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 02:03:11] 2025-06-06 06:02:53,970 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 02:03:11] 2025-06-06 06:02:53,972 | INFO     | fitting pss+swap vs Time
[2025-06-06 02:03:11] 2025-06-06 06:02:53,972 | INFO     | sum of square deviations: 1246289926.3396208
[2025-06-06 02:03:11] 2025-06-06 06:02:53,972 | INFO     | sum of deviations: 9047449728.320747
[2025-06-06 02:03:11] 2025-06-06 06:02:53,972 | INFO     | mean x: 1749184919.1886792
[2025-06-06 02:03:11] 2025-06-06 06:02:53,972 | INFO     | mean y: 2187989.289308176
[2025-06-06 02:03:11] 2025-06-06 06:02:53,972 | INFO     | -- intersect: -12696031170.979973
[2025-06-06 02:03:11] 2025-06-06 06:02:53,972 | INFO     | intersect: -12696031170.979973
[2025-06-06 02:03:11] 2025-06-06 06:02:53,973 | INFO     | chi2: 1.5135191341073309
[2025-06-06 02:03:11] 2025-06-06 06:02:53,973 | INFO     | sum of square deviations: 1132371358.6558478
[2025-06-06 02:03:11] 2025-06-06 06:02:53,973 | INFO     | sum of deviations: 8506531674.967536
[2025-06-06 02:03:11] 2025-06-06 06:02:53,973 | INFO     | mean x: 1749184766.6948051
[2025-06-06 02:03:11] 2025-06-06 06:02:53,973 | INFO     | mean y: 2187236.0844155843
[2025-06-06 02:03:11] 2025-06-06 06:02:53,973 | INFO     | -- intersect: -13137932839.826353
[2025-06-06 02:03:11] 2025-06-06 06:02:53,973 | INFO     | intersect: -13137932839.826353
[2025-06-06 02:03:11] 2025-06-06 06:02:53,974 | INFO     | chi2: 1.5091250175435207
[2025-06-06 02:03:11] 2025-06-06 06:02:53,974 | INFO     | current chi2=1.5091250175435207 (change=0.2903244805293992 %)
[2025-06-06 02:03:11] 2025-06-06 06:02:53,974 | INFO     | right removable region: 153
[2025-06-06 02:03:11] 2025-06-06 06:02:53,974 | INFO     | sum of square deviations: 1132353058.6558478
[2025-06-06 02:03:11] 2025-06-06 06:02:53,974 | INFO     | sum of deviations: -11044324878.961042
[2025-06-06 02:03:11] 2025-06-06 06:02:53,974 | INFO     | mean x: 1749185071.6948051
[2025-06-06 02:03:11] 2025-06-06 06:02:53,974 | INFO     | mean y: 2214498.298701299
[2025-06-06 02:03:11] 2025-06-06 06:02:53,974 | INFO     | -- intersect: 17062766467.980465
[2025-06-06 02:03:11] 2025-06-06 06:02:53,974 | INFO     | intersect: 17062766467.980465
[2025-06-06 02:03:11] 2025-06-06 06:02:53,975 | INFO     | chi2: 0.17267315037750994
[2025-06-06 02:03:11] 2025-06-06 06:02:53,975 | INFO     | current chi2=0.17267315037750994 (change=88.59128064612463 %)
[2025-06-06 02:03:11] 2025-06-06 06:02:53,975 | INFO     | sum of square deviations: 1025579115.9597328
[2025-06-06 02:03:11] 2025-06-06 06:02:53,975 | INFO     | sum of deviations: -10535008286.9463
[2025-06-06 02:03:11] 2025-06-06 06:02:53,975 | INFO     | mean x: 1749185224.2013423
[2025-06-06 02:03:11] 2025-06-06 06:02:53,975 | INFO     | mean y: 2213771.7315436243
[2025-06-06 02:03:11] 2025-06-06 06:02:53,975 | INFO     | -- intersect: 17970287171.04274
[2025-06-06 02:03:11] 2025-06-06 06:02:53,975 | INFO     | intersect: 17970287171.04274
[2025-06-06 02:03:11] 2025-06-06 06:02:53,975 | INFO     | chi2: 0.17187442713608803
[2025-06-06 02:03:11] 2025-06-06 06:02:53,976 | INFO     | current chi2=0.17187442713608803 (change=0.4625636583775113 %)
[2025-06-06 02:03:11] 2025-06-06 06:02:53,976 | INFO     | left removable region: 20
[2025-06-06 02:03:11] 2025-06-06 06:02:53,976 | INFO     | sum of square deviations: 729385194.9172926
[2025-06-06 02:03:11] 2025-06-06 06:02:53,976 | INFO     | sum of deviations: -7565827268.375934
[2025-06-06 02:03:11] 2025-06-06 06:02:53,976 | INFO     | mean x: 1749185346.1954887
[2025-06-06 02:03:11] 2025-06-06 06:02:53,976 | INFO     | mean y: 2209009.7067669174
[2025-06-06 02:03:11] 2025-06-06 06:02:53,976 | INFO     | -- intersect: 18146303902.104572
[2025-06-06 02:03:11] 2025-06-06 06:02:53,976 | INFO     | intersect: 18146303902.104572
[2025-06-06 02:03:11] 2025-06-06 06:02:53,977 | INFO     | chi2: 0.15982175491116582
[2025-06-06 02:03:11] 2025-06-06 06:02:53,977 | INFO     | -- intersect: 18146303902.104572
[2025-06-06 02:03:11] 2025-06-06 06:02:53,977 | INFO     | current memory leak: -10.37 B/s (using 133 data points, chi2=0.16)
[2025-06-06 02:03:11] 2025-06-06 06:02:53,977 | INFO     | ..............................
[2025-06-06 02:03:11] 2025-06-06 06:02:53,977 | INFO     | . Timing measurements:
[2025-06-06 02:03:11] 2025-06-06 06:02:53,977 | INFO     | . get job = 0 s
[2025-06-06 02:03:11] 2025-06-06 06:02:53,977 | INFO     | . initial setup = 2 s
[2025-06-06 02:03:11] 2025-06-06 06:02:53,977 | INFO     | . payload setup = 6 s
[2025-06-06 02:03:11] 2025-06-06 06:02:53,977 | INFO     | . stage-in = 0 s
[2025-06-06 02:03:11] 2025-06-06 06:02:53,977 | INFO     | . payload execution = 9667 s
[2025-06-06 02:03:11] 2025-06-06 06:02:53,977 | INFO     | . stage-out = 0 s
[2025-06-06 02:03:11] 2025-06-06 06:02:53,977 | INFO     | . log creation = 0 s
[2025-06-06 02:03:11] 2025-06-06 06:02:53,977 | INFO     | ..............................
[2025-06-06 02:03:11] 2025-06-06 06:02:54,143 | INFO     | 
[2025-06-06 02:03:11] 2025-06-06 06:02:54,144 | INFO     | job summary report
[2025-06-06 02:03:11] 2025-06-06 06:02:54,144 | INFO     | --------------------------------------------------
[2025-06-06 02:03:11] 2025-06-06 06:02:54,144 | INFO     | PanDA job id: 6669233857
[2025-06-06 02:03:11] 2025-06-06 06:02:54,144 | INFO     | task id: 44871837
[2025-06-06 02:03:11] 2025-06-06 06:02:54,144 | INFO     | errors: (none)
[2025-06-06 02:03:11] 2025-06-06 06:02:54,144 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 02:03:11] 2025-06-06 06:02:54,144 | INFO     | pilot state: finished 
[2025-06-06 02:03:11] 2025-06-06 06:02:54,144 | INFO     | transexitcode: 0
[2025-06-06 02:03:11] 2025-06-06 06:02:54,144 | INFO     | exeerrorcode: 0
[2025-06-06 02:03:11] 2025-06-06 06:02:54,144 | INFO     | exeerrordiag: 
[2025-06-06 02:03:11] 2025-06-06 06:02:54,145 | INFO     | exitcode: 0
[2025-06-06 02:03:11] 2025-06-06 06:02:54,145 | INFO     | exitmsg: OK
[2025-06-06 02:03:11] 2025-06-06 06:02:54,145 | INFO     | cpuconsumptiontime: 41130 s
[2025-06-06 02:03:11] 2025-06-06 06:02:54,145 | INFO     | nevents: 400
[2025-06-06 02:03:11] 2025-06-06 06:02:54,145 | INFO     | neventsw: 0
[2025-06-06 02:03:11] 2025-06-06 06:02:54,145 | INFO     | pid: 1141353
[2025-06-06 02:03:11] 2025-06-06 06:02:54,145 | INFO     | pgrp: 1141353
[2025-06-06 02:03:11] 2025-06-06 06:02:54,145 | INFO     | corecount: 8
[2025-06-06 02:03:11] 2025-06-06 06:02:54,145 | INFO     | event service: False
[2025-06-06 02:03:11] 2025-06-06 06:02:54,145 | INFO     | sizes: {0: 2397342, 5: 2397548, 11: 2397604, 9678: 2425974, 9679: 2434915, 9681: 2434971, 9686: 2435269}
[2025-06-06 02:03:11] 2025-06-06 06:02:54,145 | INFO     | --------------------------------------------------
[2025-06-06 02:03:11] 2025-06-06 06:02:54,145 | INFO     | 
[2025-06-06 02:03:11] 2025-06-06 06:02:54,145 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 02:03:11] 2025-06-06 06:02:54,165 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 02:03:11] 2025-06-06 06:02:54,165 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 02:03:11] 2025-06-06 06:02:54,165 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 02:03:11] 2025-06-06 06:02:54,165 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 02:03:11] 2025-06-06 06:02:54,166 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 02:03:11] 2025-06-06 06:02:54,166 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 02:03:11] 2025-06-06 06:02:54,166 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 02:03:11] 2025-06-06 06:02:54,166 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 02:03:11] 2025-06-06 06:02:54,166 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 02:03:11] 2025-06-06 06:02:54,166 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 02:03:11] 2025-06-06 06:02:54,166 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 02:03:11] 2025-06-06 06:02:54,166 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 02:03:11] 2025-06-06 06:02:54,166 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 02:03:11] 2025-06-06 06:02:54,166 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 02:03:11] 2025-06-06 06:02:54,166 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 02:03:11] 2025-06-06 06:02:54,166 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 02:03:11] 2025-06-06 06:02:54,166 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 02:03:11] 2025-06-06 06:02:54,166 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 02:03:11] 2025-06-06 06:02:54,166 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 02:03:11] 2025-06-06 06:02:54,167 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 02:03:11] 2025-06-06 06:02:54,167 | INFO     | job 6669233857 has completed (purged errors)
[2025-06-06 02:03:11] 2025-06-06 06:02:54,167 | INFO     | overall cleanup function is called
[2025-06-06 02:03:11] 2025-06-06 06:02:55,175 | INFO     | --- collectZombieJob: --- 10, [1141353]
[2025-06-06 02:03:11] 2025-06-06 06:02:55,175 | INFO     | zombie collector waiting for pid 1141353
[2025-06-06 02:03:11] 2025-06-06 06:02:55,175 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 02:03:11] 2025-06-06 06:02:55,175 | INFO     | collected zombie processes
[2025-06-06 02:03:11] 2025-06-06 06:02:55,175 | INFO     | will attempt to kill all subprocesses of pid=1141353
[2025-06-06 02:03:11] 2025-06-06 06:02:55,449 | INFO     | process IDs to be killed: [1141353] (in reverse order)
[2025-06-06 02:03:11] 2025-06-06 06:02:55,552 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 02:03:11] 2025-06-06 06:02:55,552 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 02:03:11] 2025-06-06 06:02:55,565 | INFO     | did not find any defunct processes belonging to 1141353
[2025-06-06 02:03:11] 2025-06-06 06:02:55,577 | INFO     | did not find any defunct processes belonging to 1141353
[2025-06-06 02:03:11] 2025-06-06 06:02:55,578 | INFO     | ready for new job
[2025-06-06 02:03:11] 2025-06-06 06:02:55,578 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 02:03:11] 2025-06-06 06:02:55,579 | INFO     | **************************************
[2025-06-06 02:03:11] 2025-06-06 06:02:55,579 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 02:03:11] 2025-06-06 06:02:55,579 | INFO     | **************************************
[2025-06-06 02:03:11] 2025-06-06 06:02:55,579 | INFO     | 
[2025-06-06 02:03:11] 2025-06-06 06:02:55,595 | INFO     | architecture information:
[2025-06-06 02:03:11] 2025-06-06 06:02:55,596 | INFO     | executing command: cat /etc/os-release
[2025-06-06 02:03:11] 2025-06-06 06:02:55,613 | INFO     | cat /etc/os-release:
[2025-06-06 02:03:11] NAME="CentOS Linux"
[2025-06-06 02:03:11] VERSION="7 (Core)"
[2025-06-06 02:03:11] ID="centos"
[2025-06-06 02:03:11] ID_LIKE="rhel fedora"
[2025-06-06 02:03:11] VERSION_ID="7"
[2025-06-06 02:03:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 02:03:11] ANSI_COLOR="0;31"
[2025-06-06 02:03:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 02:03:11] HOME_URL="https://www.centos.org/"
[2025-06-06 02:03:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 02:03:11] 
[2025-06-06 02:03:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 02:03:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 02:03:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 02:03:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 02:03:11] 
[2025-06-06 02:03:11] 2025-06-06 06:02:55,613 | INFO     | **************************************
[2025-06-06 02:03:11] 2025-06-06 06:02:56,116 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 02:03:11] 2025-06-06 06:02:56,135 | INFO     | sufficient remaining disk space (86484451328 B)
[2025-06-06 02:03:11] 2025-06-06 06:02:56,135 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 02:03:11] 2025-06-06 06:02:56,135 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 02:03:11] 2025-06-06 06:02:56,135 | INFO     | update_server=False
[2025-06-06 02:03:11] 2025-06-06 06:02:56,135 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 02:03:11] 2025-06-06 06:02:56,136 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 02:03:11] 2025-06-06 06:02:56,136 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 02:03:11] 2025-06-06 06:02:56,136 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 02:03:11] 2025-06-06 06:02:56,136 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 02:03:11] 2025-06-06 06:02:56,210 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 02:03:11] 2025-06-06 06:02:56,211 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 02:03:11] 2025-06-06 06:02:56,211 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 02:03:11] 2025-06-06 06:02:56,211 | INFO     | will abort loop
[2025-06-06 02:03:11] 2025-06-06 06:02:56,217 | INFO     | all payload control threads have been joined
[2025-06-06 02:03:11] 2025-06-06 06:02:56,377 | INFO     | all job control threads have been joined
[2025-06-06 02:03:11] 2025-06-06 06:02:56,735 | INFO     | all data control threads have been joined
[2025-06-06 02:03:11] 2025-06-06 06:02:57,140 | INFO     | [job] retrieve thread has finished
[2025-06-06 02:03:11] 2025-06-06 06:02:57,217 | INFO     | [job] job monitor thread has finished
[2025-06-06 02:03:11] 2025-06-06 06:02:57,222 | INFO     | [payload] control thread has finished
[2025-06-06 02:03:11] 2025-06-06 06:02:57,297 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 02:03:11] 2025-06-06 06:02:57,346 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 02:03:11] 2025-06-06 06:02:57,373 | INFO     | [job] validate thread has finished
[2025-06-06 02:03:11] 2025-06-06 06:02:57,382 | INFO     | [job] control thread has finished
[2025-06-06 02:03:11] 2025-06-06 06:02:57,633 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 02:03:11] 2025-06-06 06:02:57,649 | INFO     | [data] copytool_in thread has finished
[2025-06-06 02:03:11] 2025-06-06 06:02:57,741 | INFO     | [data] control thread has finished
[2025-06-06 02:03:11] 2025-06-06 06:02:57,920 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 02:03:11] 2025-06-06 06:02:58,049 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 02:03:11] 2025-06-06 06:02:58,363 | INFO     | [payload] validate_post thread has finished
[2025-06-06 02:03:11] 2025-06-06 06:02:58,541 | INFO     | [payload] failed_post thread has finished
[2025-06-06 02:03:11] 2025-06-06 06:02:59,041 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 02:03:11] 2025-06-06 06:02:59,302 | INFO     | [data] copytool_out thread has finished
[2025-06-06 02:03:11] 2025-06-06 06:02:59,612 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 02:03:11] 2025-06-06 06:03:00,046 | INFO     | [job] queue monitor thread has finished
[2025-06-06 02:03:11] 2025-06-06 06:03:03,620 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 02:03:11] 2025-06-06 06:03:05,713 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140275049121600)>', '<ExcThread(monitor, started 140274563016448)>']
[2025-06-06 02:03:11] 2025-06-06 06:03:06,183 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 02:03:11] 2025-06-06 06:03:06,183 | INFO     | [monitor] control thread has ended
[2025-06-06 02:03:11] 2025-06-06 06:03:10,740 | INFO     | all workflow threads have been joined
[2025-06-06 02:03:11] 2025-06-06 06:03:10,740 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 02:03:11] 2025-06-06 06:03:10,740 | INFO     | traces error code: 0
[2025-06-06 02:03:11] 2025-06-06 06:03:10,741 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 02:03:11] 2025-06-06 06:03:10,859 [wrapper] ==== pilot stdout END ====
[2025-06-06 02:03:11] 2025-06-06 06:03:10,862 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 02:03:11] 2025-06-06 06:03:10,866 [wrapper] pilotpid: 1127005
[2025-06-06 02:03:11] 2025-06-06 06:03:10,869 [wrapper] Pilot exit status: 0
[2025-06-06 02:03:11] 2025-06-06 06:03:10,880 [wrapper] pandaids: 6669233857
[2025-06-06 02:03:11] 2025-06-06 06:03:10,959 [wrapper] cleanup supervisor_pilot 1628878 1127006
[2025-06-06 02:03:11] 2025-06-06 06:03:10,964 [wrapper] Test setup, not cleaning
[2025-06-06 02:03:11] 2025-06-06 06:03:10,968 [wrapper] apfmon messages muted
[2025-06-06 02:03:11] 2025-06-06 06:03:10,971 [wrapper] ==== wrapper stdout END ====
[2025-06-06 02:03:11] 2025-06-06 06:03:10,975 [wrapper] ==== wrapper stderr END ====
[2025-06-06 02:03:11]  *** Error codes and diagnostics ***
[2025-06-06 02:03:11]     "exeErrorCode": 0,
[2025-06-06 02:03:11]     "exeErrorDiag": "",
[2025-06-06 02:03:11]     "pilotErrorCode": 0,
[2025-06-06 02:03:11]     "pilotErrorDiag": "",
[2025-06-06 02:03:11]  *** Listing of results directory ***
[2025-06-06 02:03:11] total 418008
[2025-06-06 02:03:11] -rw-r--r--. 1 boincer umatlas    495897 May 28 23:09 pilot3.tar.gz
[2025-06-06 02:03:11] -rw-r--r--. 1 boincer umatlas      5111 May 28 23:20 queuedata.json
[2025-06-06 02:03:11] -rwx------. 1 boincer umatlas     37140 May 28 23:20 runpilot2-wrapper.sh
[2025-06-06 02:03:11] -rw-r--r--. 1 boincer umatlas       100 Jun  5 23:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 02:03:11] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 23:20 run_atlas
[2025-06-06 02:03:11] -rw-r--r--. 1 boincer umatlas       105 Jun  5 23:20 job.xml
[2025-06-06 02:03:11] -rw-r--r--. 2 boincer umatlas 223522138 Jun  5 23:21 EVNT.44871834._002082.pool.root.1
[2025-06-06 02:03:11] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 23:21 start_atlas.sh
[2025-06-06 02:03:11] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 23:21 shared
[2025-06-06 02:03:11] -rw-r--r--. 2 boincer umatlas    508886 Jun  5 23:21 input.tar.gz
[2025-06-06 02:03:11] -rw-r--r--. 1 boincer umatlas         0 Jun  5 23:21 boinc_lockfile
[2025-06-06 02:03:11] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 23:21 pandaJob.out
[2025-06-06 02:03:11] -rw-------. 1 boincer umatlas    987721 Jun  5 23:21 agis_schedconf.cvmfs.json
[2025-06-06 02:03:11] -rw-------. 1 boincer umatlas   1598969 Jun  5 23:21 agis_ddmendpoints.agis.ALL.json
[2025-06-06 02:03:11] drwx------. 4 boincer umatlas      4096 Jun  5 23:21 pilot3
[2025-06-06 02:03:11] -rw-r--r--. 1 boincer umatlas      6896 Jun  6 02:02 init_data.xml
[2025-06-06 02:03:11] -rw-------. 1 boincer umatlas 198206495 Jun  6 02:02 HITS.44871837._094422.pool.root.1
[2025-06-06 02:03:11] -rw-r--r--. 1 boincer umatlas       529 Jun  6 02:02 boinc_task_state.xml
[2025-06-06 02:03:11] -rw-------. 1 boincer umatlas      1029 Jun  6 02:02 memory_monitor_summary.json
[2025-06-06 02:03:11] -rw-------. 1 boincer umatlas    345795 Jun  6 02:02 log.44871837._094422.job.log.tgz.1
[2025-06-06 02:03:11] -rw-------. 1 boincer umatlas        95 Jun  6 02:02 pilot_heartbeat.json
[2025-06-06 02:03:11] -rw-------. 1 boincer umatlas      7689 Jun  6 02:02 heartbeat.json
[2025-06-06 02:03:11] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 02:03 boinc_mmap_file
[2025-06-06 02:03:11] -rw-r--r--. 1 boincer umatlas        27 Jun  6 02:03 wrapper_checkpoint.txt
[2025-06-06 02:03:11] -rw-------. 1 boincer umatlas      4662 Jun  6 02:03 pilotlog.txt
[2025-06-06 02:03:11] -rw-------. 1 boincer umatlas    891281 Jun  6 02:03 log.44871837._094422.job.log.1
[2025-06-06 02:03:11] -rw-------. 1 boincer umatlas       357 Jun  6 02:03 output.list
[2025-06-06 02:03:11] -rw-r--r--. 1 boincer umatlas       620 Jun  6 02:03 runtime_log
[2025-06-06 02:03:11] -rw-------. 1 boincer umatlas   1259520 Jun  6 02:03 result.tar.gz
[2025-06-06 02:03:11] -rw-------. 1 boincer umatlas       653 Jun  6 02:03 vSsNDmK0ie7n9Rq4apOajLDm4fhM0noT9bVof3QYDmoZUKDmdexH6m.diag
[2025-06-06 02:03:11] -rw-r--r--. 1 boincer umatlas      8659 Jun  6 02:03 runtime_log.err
[2025-06-06 02:03:11] -rw-r--r--. 1 boincer umatlas     21158 Jun  6 02:03 stderr.txt
[2025-06-06 02:03:11] HITS file was successfully produced:
[2025-06-06 02:03:11] -rw-------. 1 boincer umatlas 198206495 Jun  6 02:02 shared/HITS.pool.root.1
[2025-06-06 02:03:11]  *** Contents of shared directory: ***
[2025-06-06 02:03:11] total 413600
[2025-06-06 02:03:11] -rw-r--r--. 2 boincer umatlas 223522138 Jun  5 23:21 ATLAS.root_0
[2025-06-06 02:03:11] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 23:21 start_atlas.sh
[2025-06-06 02:03:11] -rw-r--r--. 2 boincer umatlas    508886 Jun  5 23:21 input.tar.gz
[2025-06-06 02:03:11] -rw-------. 1 boincer umatlas 198206495 Jun  6 02:02 HITS.pool.root.1
[2025-06-06 02:03:11] -rw-------. 1 boincer umatlas   1259520 Jun  6 02:03 result.tar.gz
02:03:12 (1123410): run_atlas exited; CPU time 41227.094496
02:03:12 (1123410): called boinc_finish(0)

</stderr_txt>
]]>

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