Stderr output

<core_client_version>7.16.5</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-07 01:40:57 (17892): Detected: vboxwrapper 26206
2025-06-07 01:40:57 (17892): Detected: BOINC client v7.16.5
2025-06-07 01:40:57 (17892): Detected: VirtualBox VboxManage Interface (Version: 5.2.44)
2025-06-07 01:40:57 (17892): Successfully copied 'init_data.xml' to the shared directory.
2025-06-07 01:40:58 (17892): Create VM. (boinc_a9dd118c654b0349, slot#4)
2025-06-07 01:40:58 (17892): Setting Memory Size for VM. (4400MB)
2025-06-07 01:40:59 (17892): Setting CPU Count for VM. (4)
2025-06-07 01:40:59 (17892): Setting Chipset Options for VM.
2025-06-07 01:40:59 (17892): Setting Graphics Controller Options for VM.
2025-06-07 01:40:59 (17892): Setting Boot Options for VM.
2025-06-07 01:41:00 (17892): Setting Network Configuration for NAT.
2025-06-07 01:41:00 (17892): Enabling VM Network Access.
2025-06-07 01:41:00 (17892): Disabling USB Support for VM.
2025-06-07 01:41:00 (17892): Disabling COM Port Support for VM.
2025-06-07 01:41:01 (17892): Disabling LPT Port Support for VM.
2025-06-07 01:41:01 (17892): Disabling Audio Support for VM.
2025-06-07 01:41:01 (17892): Disabling Clipboard Support for VM.
2025-06-07 01:41:01 (17892): Disabling Drag and Drop Support for VM.
2025-06-07 01:41:02 (17892): Adding storage controller(s) to VM.
2025-06-07 01:41:02 (17892): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-07 01:41:02 (17892): Adding VirtualBox Guest Additions to VM.
2025-06-07 01:41:03 (17892): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-07 01:41:03 (17892): forwarding host port 52085 to guest port 80
2025-06-07 01:41:03 (17892): Enabling remote desktop for VM.
2025-06-07 01:41:04 (17892): Enabling shared directory for VM.
2025-06-07 01:41:04 (17892): Starting VM using VBoxManage interface. (boinc_a9dd118c654b0349, slot#4)
2025-06-07 01:41:08 (17892): Successfully started VM. (PID = '12392')
2025-06-07 01:41:08 (17892): Reporting VM Process ID to BOINC.
2025-06-07 01:41:08 (17892): Guest Log: BIOS: VirtualBox 5.2.44
2025-06-07 01:41:08 (17892): Guest Log: CPUID EDX: 0x178bfbff
2025-06-07 01:41:08 (17892): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-07 01:41:08 (17892): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-07 01:41:08 (17892): Detected: Web Application Enabled (http://localhost:52085)
2025-06-07 01:41:08 (17892): Detected: Remote Desktop Enabled (localhost:52086)
2025-06-07 01:41:08 (17892): Preference change detected
2025-06-07 01:41:08 (17892): Setting CPU throttle for VM. (100%)
2025-06-07 01:41:09 (17892): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-07 01:41:10 (17892): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-07 01:41:10 (17892): Guest Log: BIOS: Booting from Hard Disk...
2025-06-07 01:41:13 (17892): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-07 01:41:13 (17892): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-07 01:41:13 (17892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-07 01:41:13 (17892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-07 01:41:13 (17892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-07 01:41:13 (17892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-07 01:41:13 (17892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-07 01:41:13 (17892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-07 01:41:13 (17892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-07 01:41:13 (17892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-07 01:41:13 (17892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-07 01:41:13 (17892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-07 01:41:13 (17892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-07 01:41:13 (17892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-07 01:41:13 (17892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-07 01:41:13 (17892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-07 01:41:13 (17892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-07 01:41:13 (17892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-07 01:41:13 (17892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-07 01:41:13 (17892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-07 01:41:13 (17892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-07 01:41:13 (17892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-07 01:41:13 (17892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-07 01:41:13 (17892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-07 01:41:13 (17892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-07 01:41:13 (17892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-07 01:41:13 (17892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-07 01:41:13 (17892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-07 01:41:13 (17892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-07 01:41:13 (17892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-07 01:41:13 (17892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-07 01:41:13 (17892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-07 01:41:19 (17892): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-07 01:41:19 (17892): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-07 01:41:25 (17892): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-07 01:41:25 (17892): Guest Log: 00:00:00.000175 main     Log opened 2025-06-07T01:41:23.415538000Z
2025-06-07 01:41:25 (17892): Guest Log: 00:00:00.000286 main     OS Product: Linux
2025-06-07 01:41:25 (17892): Guest Log: 00:00:00.000328 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-07 01:41:25 (17892): Guest Log: 00:00:00.000357 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-07 01:41:25 (17892): Guest Log: 00:00:00.000383 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-07 01:41:25 (17892): Guest Log: 00:00:00.000384 main     Process ID: 1300
2025-06-07 01:41:25 (17892): Guest Log: 00:00:00.000384 main     Package type: LINUX_64BITS_GENERIC
2025-06-07 01:41:25 (17892): Guest Log: 00:00:00.001883 main     5.2.32 r132073 started. Verbose level = 0
2025-06-07 01:41:25 (17892): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-07 01:41:25 (17892): Guest Log: [INFO] Mounting shared directory
2025-06-07 01:41:25 (17892): Guest Log: [INFO] Checking for init_data.xml
2025-06-07 01:41:31 (17892): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-07 01:41:31 (17892): Guest Log: [INFO] Detected branch: prod
2025-06-07 01:41:31 (17892): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-07 01:41:31 (17892): Guest Log: Copying input files
2025-06-07 01:41:33 (17892): Guest Log: Copied input files into RunAtlas.
2025-06-07 01:41:33 (17892): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-07 01:41:33 (17892): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-07 01:41:33 (17892): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-07 01:41:33 (17892): Guest Log: Further information can be found at the LHC@home message board.
2025-06-07 01:41:35 (17892): Guest Log: 00:00:10.003750 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 788 298 833 000ns (GuestNow=1 749 249 695 120 119 000 ns GuestLast=1 749 260 483 418 952 000 ns fSetTimeLastLoop=true )
2025-06-07 01:41:46 (17892): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-07 01:42:06 (17892): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-07 01:42:06 (17892): Guest Log: 2.6.3.0 1577 0 32196 146878 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-06-07 01:42:07 (17892): Guest Log: copied the webapp to /var/www
2025-06-07 01:42:07 (17892): Guest Log: ATHENA_PROC_NUMBER=4
2025-06-07 01:42:07 (17892): Guest Log: ATHENA_CORE_NUMBER=4
2025-06-07 01:42:07 (17892): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-07 01:42:07 (17892): Guest Log:  *** Starting ATLAS job. (PandaID=6668863661 taskID=44871837) ***
2025-06-07 03:21:17 (17892): Status Report: Elapsed Time: '6000.000000'
2025-06-07 03:21:17 (17892): Status Report: CPU Time: '21194.875000'
2025-06-07 05:01:20 (17892): Status Report: Elapsed Time: '12000.000000'
2025-06-07 05:01:20 (17892): Status Report: CPU Time: '43694.796875'
2025-06-07 06:17:59 (17892): Guest Log:  *** Job finished ***
2025-06-07 06:17:59 (17892): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-07 06:17:59 (17892): Guest Log: 2025-06-07 03:17:50,529 | INFO     | [job] create_data_payload thread has finished
2025-06-07 06:17:59 (17892): Guest Log: 2025-06-07 03:17:51,293 | INFO     | [data] copytool_out thread has finished
2025-06-07 06:17:59 (17892): Guest Log: 2025-06-07 03:17:52,217 | INFO     | [data] queue_monitor thread has finished
2025-06-07 06:17:59 (17892): Guest Log: 2025-06-07 03:17:52,736 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139860224579392)>', '<ExcThread(monitor, started 139859704411904)>']
2025-06-07 06:17:59 (17892): Guest Log: 2025-06-07 03:17:52,893 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-07 06:17:59 (17892): Guest Log: 2025-06-07 03:17:52,893 | INFO     | [monitor] control thread has ended
2025-06-07 06:17:59 (17892): Guest Log: 2025-06-07 03:17:57,741 | INFO     | all workflow threads have been joined
2025-06-07 06:17:59 (17892): Guest Log: 2025-06-07 03:17:57,741 | INFO     | end of generic workflow (traces error code: 0)
2025-06-07 06:17:59 (17892): Guest Log: 2025-06-07 03:17:57,741 | INFO     | traces error code: 0
2025-06-07 06:17:59 (17892): Guest Log: 2025-06-07 03:17:57,741 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-07 06:17:59 (17892): Guest Log: 2025-06-07 03:17:57,857 [wrapper] ==== pilot stdout END ====
2025-06-07 06:17:59 (17892): Guest Log: 2025-06-07 03:17:57,882 [wrapper] ==== wrapper stdout RESUME ====
2025-06-07 06:17:59 (17892): Guest Log: 2025-06-07 03:17:57,887 [wrapper] pilotpid: 5901
2025-06-07 06:17:59 (17892): Guest Log: 2025-06-07 03:17:57,892 [wrapper] Pilot exit status: 0
2025-06-07 06:17:59 (17892): Guest Log: 2025-06-07 03:17:58,051 [wrapper] pandaids: 6668863661
2025-06-07 06:17:59 (17892): Guest Log: 2025-06-07 03:17:58,109 [wrapper] cleanup supervisor_pilot 17231 5902
2025-06-07 06:17:59 (17892): Guest Log: 2025-06-07 03:17:58,151 [wrapper] Test setup, not cleaning
2025-06-07 06:17:59 (17892): Guest Log: 2025-06-07 03:17:58,157 [wrapper] apfmon messages muted
2025-06-07 06:17:59 (17892): Guest Log: 2025-06-07 03:17:58,162 [wrapper] ==== wrapper stdout END ====
2025-06-07 06:17:59 (17892): Guest Log: 2025-06-07 03:17:58,167 [wrapper] ==== wrapper stderr END ====
2025-06-07 06:17:59 (17892): Guest Log:  *** Error codes and diagnostics ***
2025-06-07 06:17:59 (17892): Guest Log:     "exeErrorCode": 0,
2025-06-07 06:17:59 (17892): Guest Log:     "exeErrorDiag": "",
2025-06-07 06:17:59 (17892): Guest Log:     "pilotErrorCode": 0,
2025-06-07 06:17:59 (17892): Guest Log:     "pilotErrorDiag": "",
2025-06-07 06:17:59 (17892): Guest Log:  *** Listing of results directory ***
2025-06-07 06:17:59 (17892): Guest Log: total 201348
2025-06-07 06:17:59 (17892): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 28 20:14 pilot3.tar.gz
2025-06-07 06:17:59 (17892): Guest Log: -rwx------. 1 atlas atlas     37140 May 28 20:37 runpilot2-wrapper.sh
2025-06-07 06:17:59 (17892): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 28 20:37 queuedata.json
2025-06-07 06:17:59 (17892): Guest Log: -rwxr-xr-x. 1 atlas atlas      8878 Jun  6 22:41 init_data.xml
2025-06-07 06:17:59 (17892): Guest Log: -rwxr-xr-x. 1 atlas atlas    508881 Jun  6 22:41 input.tar.gz
2025-06-07 06:17:59 (17892): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 Jun  6 22:41 start_atlas.sh
2025-06-07 06:17:59 (17892): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  6 22:41 EVNT.44871834._003504.pool.root.1 -> /data/./ATLAS.root_0
2025-06-07 06:17:59 (17892): Guest Log: -rw-r--r--. 1 atlas atlas      2559 Jun  6 22:42 pandaJob.out
2025-06-07 06:17:59 (17892): Guest Log: -rw-------. 1 atlas atlas    985748 Jun  6 22:43 agis_schedconf.cvmfs.json
2025-06-07 06:17:59 (17892): Guest Log: drwx------. 4 atlas atlas      4096 Jun  6 22:43 pilot3
2025-06-07 06:17:59 (17892): Guest Log: -rw-------. 1 atlas atlas 198958033 Jun  7 03:17 HITS.44871837._090064.pool.root.1
2025-06-07 06:17:59 (17892): Guest Log: -rw-------. 1 atlas atlas      1031 Jun  7 03:17 memory_monitor_summary.json
2025-06-07 06:17:59 (17892): Guest Log: -rw-------. 1 atlas atlas   1598969 Jun  7 03:17 agis_ddmendpoints.agis.ALL.json
2025-06-07 06:17:59 (17892): Guest Log: -rw-------. 1 atlas atlas    359058 Jun  7 03:17 log.44871837._090064.job.log.tgz.1
2025-06-07 06:17:59 (17892): Guest Log: -rw-------. 1 atlas atlas        95 Jun  7 03:17 pilot_heartbeat.json
2025-06-07 06:17:59 (17892): Guest Log: -rw-------. 1 atlas atlas      7727 Jun  7 03:17 heartbeat.json
2025-06-07 06:17:59 (17892): Guest Log: -rw-------. 1 atlas atlas      4413 Jun  7 03:17 pilotlog.txt
2025-06-07 06:17:59 (17892): Guest Log: -rw-------. 1 atlas atlas   1368619 Jun  7 03:17 log.44871837._090064.job.log.1
2025-06-07 06:17:59 (17892): Guest Log: -rw-------. 1 atlas atlas       357 Jun  7 03:17 output.list
2025-06-07 06:17:59 (17892): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  7 03:17 runtime_log
2025-06-07 06:17:59 (17892): Guest Log: -rw-------. 1 atlas atlas   1751040 Jun  7 03:17 result.tar.gz
2025-06-07 06:17:59 (17892): Guest Log: -rw-r--r--. 1 atlas atlas      8635 Jun  7 03:17 runtime_log.err
2025-06-07 06:17:59 (17892): Guest Log: -rw-------. 1 atlas atlas       671 Jun  7 03:17 f5UKDm7hce7n9Rq4apOajLDm4fhM0noT9bVof3QYDmH5TKDmQ287Hn.diag
2025-06-07 06:17:59 (17892): Guest Log: Looking for outputfile HITS.44871837._090064.pool.root.1
2025-06-07 06:17:59 (17892): Guest Log: HITS file was successfully produced
2025-06-07 06:17:59 (17892): Guest Log: -rw-------. 1 atlas atlas 198958033 Jun  7 03:17 /home/atlas/RunAtlas/HITS.44871837._090064.pool.root.1
2025-06-07 06:18:01 (17892): Guest Log: Successfully finished the ATLAS job!
2025-06-07 06:18:01 (17892): Guest Log: Copying the results back to the shared directory!
2025-06-07 06:18:01 (17892): Guest Log:  *** Contents of shared directory: ***
2025-06-07 06:18:01 (17892): Guest Log: total 417168
2025-06-07 06:18:01 (17892): Guest Log: -rwxrwxrwx. 1 root root 225925807 Jun  6 22:40 ATLAS.root_0
2025-06-07 06:18:01 (17892): Guest Log: -rwxrwxrwx. 1 root root 198958033 Jun  7 03:18 HITS.pool.root.1
2025-06-07 06:18:01 (17892): Guest Log: -rwxrwxrwx. 1 root root      8878 Jun  6 22:40 init_data.xml
2025-06-07 06:18:01 (17892): Guest Log: -rwxrwxrwx. 1 root root    508881 Jun  6 03:15 input.tar.gz
2025-06-07 06:18:01 (17892): Guest Log: -rwxrwxrwx. 1 root root   1751040 Jun  7 03:18 result.tar.gz
2025-06-07 06:18:01 (17892): Guest Log: -rwxrwxrwx. 1 root root     15093 Jun  6 03:15 start_atlas.sh
2025-06-07 06:18:01 (17892): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-07 06:18:01 (17892): VM Completion File Detected.
2025-06-07 06:18:01 (17892): Powering off VM.
2025-06-07 06:18:02 (17892): Successfully stopped VM.
2025-06-07 06:18:02 (17892): Deregistering VM. (boinc_a9dd118c654b0349, slot#4)
2025-06-07 06:18:02 (17892): Removing network bandwidth throttle group from VM.
2025-06-07 06:18:02 (17892): Removing VM from VirtualBox.
06:18:07 (17892): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN