Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:49:12 (1572754): wrapper (7.7.26015): starting
22:49:12 (1572754): wrapper: running run_atlas (--nthreads 10)
[2025-06-05 22:49:12] Arguments: --nthreads 10
[2025-06-05 22:49:12] Threads: 10
[2025-06-05 22:49:12] Checking for CVMFS
[2025-06-05 22:49:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 22:49:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 22:49:13] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 22:49:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 22:49:13] 2.12.6.0 1988508 223055 318140 146840 1 199 19222862 32935937 12588 130560 1 407985692 99.637 404702917 26997 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 22:49:13] CVMFS is ok
[2025-06-05 22:49:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 22:49:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 22:49:13] Further information can be found at the LHC@home message board.
[2025-06-05 22:49:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 22:49:13] Checking for apptainer binary...
[2025-06-05 22:49:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 22:49:13] Running /usr/bin/apptainer --version
[2025-06-05 22:49:13] apptainer version 1.4.1-1.el9
[2025-06-05 22:49:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 22:49:14] c-5-1.aglt2.org
[2025-06-05 22:49:14] apptainer works
[2025-06-05 22:49:14] Set ATHENA_PROC_NUMBER=10
[2025-06-05 22:49:14] Set ATHENA_CORE_NUMBER=10
[2025-06-05 22:49:14] Starting ATLAS job with PandaID=6668863073
[2025-06-05 22:49:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 01:35:04]  *** The last 200 lines of the pilot log: ***
[2025-06-06 01:35:04] 2025-06-06 05:34:29,734 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 01:35:04] 2025-06-06 05:34:29,734 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 01:35:04] 2025-06-06 05:34:29,735 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 01:35:04] 2025-06-06 05:34:29,739 | INFO     | fitting pss+swap vs Time
[2025-06-06 01:35:04] 2025-06-06 05:34:29,743 | INFO     | sum of square deviations: 1318334311.77778
[2025-06-06 01:35:04] 2025-06-06 05:34:29,744 | INFO     | sum of deviations: 7060866054.074062
[2025-06-06 01:35:04] 2025-06-06 05:34:29,744 | INFO     | mean x: 1749183125.6296296
[2025-06-06 01:35:04] 2025-06-06 05:34:29,745 | INFO     | mean y: 2273367.0679012346
[2025-06-06 01:35:04] 2025-06-06 05:34:29,745 | INFO     | -- intersect: -9366175624.79849
[2025-06-06 01:35:04] 2025-06-06 05:34:29,745 | INFO     | intersect: -9366175624.79849
[2025-06-06 01:35:04] 2025-06-06 05:34:29,745 | INFO     | chi2: 2.5341456498454273
[2025-06-06 01:35:04] 2025-06-06 05:34:29,746 | INFO     | sum of square deviations: 1199993975.452231
[2025-06-06 01:35:04] 2025-06-06 05:34:29,746 | INFO     | sum of deviations: 16301000390.089165
[2025-06-06 01:35:04] 2025-06-06 05:34:29,747 | INFO     | mean x: 1749182973.1273885
[2025-06-06 01:35:04] 2025-06-06 05:34:29,747 | INFO     | mean y: 2284969.0955414013
[2025-06-06 01:35:04] 2025-06-06 05:34:29,747 | INFO     | -- intersect: -23759027929.614037
[2025-06-06 01:35:04] 2025-06-06 05:34:29,747 | INFO     | intersect: -23759027929.614037
[2025-06-06 01:35:04] 2025-06-06 05:34:29,753 | INFO     | chi2: 1.8721802142199495
[2025-06-06 01:35:04] 2025-06-06 05:34:29,753 | INFO     | current chi2=1.8721802142199495 (change=26.121838563851096 %)
[2025-06-06 01:35:04] 2025-06-06 05:34:29,753 | INFO     | sum of square deviations: 1088946033.86842
[2025-06-06 01:35:04] 2025-06-06 05:34:29,754 | INFO     | sum of deviations: 16161367458.355259
[2025-06-06 01:35:04] 2025-06-06 05:34:29,754 | INFO     | mean x: 1749182820.618421
[2025-06-06 01:35:04] 2025-06-06 05:34:29,754 | INFO     | mean y: 2284755.7302631577
[2025-06-06 01:35:04] 2025-06-06 05:34:29,754 | INFO     | -- intersect: -25957850491.22216
[2025-06-06 01:35:04] 2025-06-06 05:34:29,754 | INFO     | intersect: -25957850491.22216
[2025-06-06 01:35:04] 2025-06-06 05:34:29,755 | INFO     | chi2: 1.87255834570156
[2025-06-06 01:35:04] 2025-06-06 05:34:29,755 | INFO     | current chi2=1.87255834570156 (change=-0.020197386914914454 %)
[2025-06-06 01:35:04] 2025-06-06 05:34:29,755 | INFO     | right removable region: 151
[2025-06-06 01:35:04] 2025-06-06 05:34:29,755 | INFO     | sum of square deviations: 1199990804.191077
[2025-06-06 01:35:04] 2025-06-06 05:34:29,771 | INFO     | sum of deviations: -18786013013.923576
[2025-06-06 01:35:04] 2025-06-06 05:34:29,772 | INFO     | mean x: 1749183278.133758
[2025-06-06 01:35:04] 2025-06-06 05:34:29,772 | INFO     | mean y: 2306357.853503185
[2025-06-06 01:35:04] 2025-06-06 05:34:29,772 | INFO     | -- intersect: 27385999392.826035
[2025-06-06 01:35:04] 2025-06-06 05:34:29,772 | INFO     | intersect: 27385999392.826035
[2025-06-06 01:35:04] 2025-06-06 05:34:29,772 | INFO     | chi2: 0.968430283218185
[2025-06-06 01:35:04] 2025-06-06 05:34:29,772 | INFO     | current chi2=0.968430283218185 (change=61.78474259057465 %)
[2025-06-06 01:35:04] 2025-06-06 05:34:29,773 | INFO     | sum of square deviations: 1088949759.0986817
[2025-06-06 01:35:04] 2025-06-06 05:34:29,774 | INFO     | sum of deviations: -22792000961.697372
[2025-06-06 01:35:04] 2025-06-06 05:34:29,774 | INFO     | mean x: 1749183430.6381578
[2025-06-06 01:35:04] 2025-06-06 05:34:29,774 | INFO     | mean y: 2311797.2236842103
[2025-06-06 01:35:04] 2025-06-06 05:34:29,774 | INFO     | -- intersect: 36613174787.16368
[2025-06-06 01:35:04] 2025-06-06 05:34:29,774 | INFO     | intersect: 36613174787.16368
[2025-06-06 01:35:04] 2025-06-06 05:34:29,774 | INFO     | chi2: 0.890157704773841
[2025-06-06 01:35:04] 2025-06-06 05:34:29,774 | INFO     | current chi2=0.890157704773841 (change=8.082417475033601 %)
[2025-06-06 01:35:04] 2025-06-06 05:34:29,775 | INFO     | left removable region: 20
[2025-06-06 01:35:04] 2025-06-06 05:34:29,775 | INFO     | sum of square deviations: 697074103.5267191
[2025-06-06 01:35:04] 2025-06-06 05:34:29,776 | INFO     | sum of deviations: -1990909380.3511436
[2025-06-06 01:35:04] 2025-06-06 05:34:29,776 | INFO     | mean x: 1749183400.1374047
[2025-06-06 01:35:04] 2025-06-06 05:34:29,776 | INFO     | mean y: 2308224.9083969467
[2025-06-06 01:35:04] 2025-06-06 05:34:29,776 | INFO     | -- intersect: 4998140980.234076
[2025-06-06 01:35:04] 2025-06-06 05:34:29,780 | INFO     | intersect: 4998140980.234076
[2025-06-06 01:35:04] 2025-06-06 05:34:29,781 | INFO     | chi2: 0.11173741231303096
[2025-06-06 01:35:04] 2025-06-06 05:34:29,781 | INFO     | -- intersect: 4998140980.234076
[2025-06-06 01:35:04] 2025-06-06 05:34:29,781 | INFO     | current memory leak: -2.86 B/s (using 131 data points, chi2=0.11)
[2025-06-06 01:35:04] 2025-06-06 05:34:29,782 | INFO     | ..............................
[2025-06-06 01:35:04] 2025-06-06 05:34:29,782 | INFO     | . Timing measurements:
[2025-06-06 01:35:04] 2025-06-06 05:34:29,782 | INFO     | . get job = 0 s
[2025-06-06 01:35:04] 2025-06-06 05:34:29,782 | INFO     | . initial setup = 4 s
[2025-06-06 01:35:04] 2025-06-06 05:34:29,782 | INFO     | . payload setup = 12 s
[2025-06-06 01:35:04] 2025-06-06 05:34:29,782 | INFO     | . stage-in = 0 s
[2025-06-06 01:35:04] 2025-06-06 05:34:29,782 | INFO     | . payload execution = 9843 s
[2025-06-06 01:35:04] 2025-06-06 05:34:29,782 | INFO     | . stage-out = 1 s
[2025-06-06 01:35:04] 2025-06-06 05:34:29,782 | INFO     | . log creation = 0 s
[2025-06-06 01:35:04] 2025-06-06 05:34:29,782 | INFO     | ..............................
[2025-06-06 01:35:04] 2025-06-06 05:34:29,925 | INFO     | 
[2025-06-06 01:35:04] 2025-06-06 05:34:29,925 | INFO     | job summary report
[2025-06-06 01:35:04] 2025-06-06 05:34:29,925 | INFO     | --------------------------------------------------
[2025-06-06 01:35:04] 2025-06-06 05:34:29,926 | INFO     | PanDA job id: 6668863073
[2025-06-06 01:35:04] 2025-06-06 05:34:29,926 | INFO     | task id: 44871837
[2025-06-06 01:35:04] 2025-06-06 05:34:29,926 | INFO     | errors: (none)
[2025-06-06 01:35:04] 2025-06-06 05:34:29,926 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 01:35:04] 2025-06-06 05:34:29,926 | INFO     | pilot state: finished 
[2025-06-06 01:35:04] 2025-06-06 05:34:29,926 | INFO     | transexitcode: 0
[2025-06-06 01:35:04] 2025-06-06 05:34:29,926 | INFO     | exeerrorcode: 0
[2025-06-06 01:35:04] 2025-06-06 05:34:29,926 | INFO     | exeerrordiag: 
[2025-06-06 01:35:04] 2025-06-06 05:34:29,926 | INFO     | exitcode: 0
[2025-06-06 01:35:04] 2025-06-06 05:34:29,927 | INFO     | exitmsg: OK
[2025-06-06 01:35:04] 2025-06-06 05:34:29,927 | INFO     | cpuconsumptiontime: 58956 s
[2025-06-06 01:35:04] 2025-06-06 05:34:29,927 | INFO     | nevents: 400
[2025-06-06 01:35:04] 2025-06-06 05:34:29,927 | INFO     | neventsw: 0
[2025-06-06 01:35:04] 2025-06-06 05:34:29,927 | INFO     | pid: 1583832
[2025-06-06 01:35:04] 2025-06-06 05:34:29,927 | INFO     | pgrp: 1583832
[2025-06-06 01:35:04] 2025-06-06 05:34:29,927 | INFO     | corecount: 10
[2025-06-06 01:35:04] 2025-06-06 05:34:29,927 | INFO     | event service: False
[2025-06-06 01:35:04] 2025-06-06 05:34:29,927 | INFO     | sizes: {0: 2397221, 1: 2397420, 9: 2397626, 12: 2397654, 9858: 2425993, 9859: 2425992, 9861: 2435173, 9874: 2435287}
[2025-06-06 01:35:04] 2025-06-06 05:34:29,927 | INFO     | --------------------------------------------------
[2025-06-06 01:35:04] 2025-06-06 05:34:29,928 | INFO     | 
[2025-06-06 01:35:04] 2025-06-06 05:34:29,928 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 01:35:04] 2025-06-06 05:34:29,955 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 01:35:04] 2025-06-06 05:34:29,955 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 01:35:04] 2025-06-06 05:34:29,955 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 01:35:04] 2025-06-06 05:34:29,955 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 01:35:04] 2025-06-06 05:34:29,956 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 01:35:04] 2025-06-06 05:34:29,956 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 01:35:04] 2025-06-06 05:34:29,956 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 01:35:04] 2025-06-06 05:34:29,956 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 01:35:04] 2025-06-06 05:34:29,956 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 01:35:04] 2025-06-06 05:34:29,956 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 01:35:04] 2025-06-06 05:34:29,956 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 01:35:04] 2025-06-06 05:34:29,956 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 01:35:04] 2025-06-06 05:34:29,956 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 01:35:04] 2025-06-06 05:34:29,957 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 01:35:04] 2025-06-06 05:34:29,957 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 01:35:04] 2025-06-06 05:34:29,957 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 01:35:04] 2025-06-06 05:34:29,957 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 01:35:04] 2025-06-06 05:34:29,957 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 01:35:04] 2025-06-06 05:34:29,957 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 01:35:04] 2025-06-06 05:34:29,957 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 01:35:04] 2025-06-06 05:34:29,957 | INFO     | job 6668863073 has completed (purged errors)
[2025-06-06 01:35:04] 2025-06-06 05:34:29,958 | INFO     | overall cleanup function is called
[2025-06-06 01:35:04] 2025-06-06 05:34:30,966 | INFO     | --- collectZombieJob: --- 10, [1583832]
[2025-06-06 01:35:04] 2025-06-06 05:34:30,966 | INFO     | zombie collector waiting for pid 1583832
[2025-06-06 01:35:04] 2025-06-06 05:34:30,967 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 01:35:04] 2025-06-06 05:34:30,967 | INFO     | collected zombie processes
[2025-06-06 01:35:04] 2025-06-06 05:34:30,967 | INFO     | will attempt to kill all subprocesses of pid=1583832
[2025-06-06 01:35:04] 2025-06-06 05:34:31,263 | INFO     | process IDs to be killed: [1583832] (in reverse order)
[2025-06-06 01:35:04] 2025-06-06 05:34:31,356 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 01:35:04] 2025-06-06 05:34:31,356 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 01:35:04] 2025-06-06 05:34:31,380 | INFO     | did not find any defunct processes belonging to 1583832
[2025-06-06 01:35:04] 2025-06-06 05:34:31,399 | INFO     | did not find any defunct processes belonging to 1583832
[2025-06-06 01:35:04] 2025-06-06 05:34:31,403 | INFO     | ready for new job
[2025-06-06 01:35:04] 2025-06-06 05:34:31,404 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 01:35:04] 2025-06-06 05:34:31,405 | INFO     | **************************************
[2025-06-06 01:35:04] 2025-06-06 05:34:31,405 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 01:35:04] 2025-06-06 05:34:31,405 | INFO     | **************************************
[2025-06-06 01:35:04] 2025-06-06 05:34:31,405 | INFO     | 
[2025-06-06 01:35:04] 2025-06-06 05:34:31,421 | INFO     | architecture information:
[2025-06-06 01:35:04] 2025-06-06 05:34:31,421 | INFO     | executing command: cat /etc/os-release
[2025-06-06 01:35:04] 2025-06-06 05:34:31,456 | INFO     | cat /etc/os-release:
[2025-06-06 01:35:04] NAME="CentOS Linux"
[2025-06-06 01:35:04] VERSION="7 (Core)"
[2025-06-06 01:35:04] ID="centos"
[2025-06-06 01:35:04] ID_LIKE="rhel fedora"
[2025-06-06 01:35:04] VERSION_ID="7"
[2025-06-06 01:35:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 01:35:04] ANSI_COLOR="0;31"
[2025-06-06 01:35:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 01:35:04] HOME_URL="https://www.centos.org/"
[2025-06-06 01:35:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 01:35:04] 
[2025-06-06 01:35:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 01:35:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 01:35:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 01:35:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 01:35:04] 
[2025-06-06 01:35:04] 2025-06-06 05:34:31,456 | INFO     | **************************************
[2025-06-06 01:35:04] 2025-06-06 05:34:31,959 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 01:35:04] 2025-06-06 05:34:32,049 | INFO     | sufficient remaining disk space (76567019520 B)
[2025-06-06 01:35:04] 2025-06-06 05:34:32,050 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 01:35:04] 2025-06-06 05:34:32,050 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 01:35:04] 2025-06-06 05:34:32,050 | INFO     | update_server=False
[2025-06-06 01:35:04] 2025-06-06 05:34:32,050 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 01:35:04] 2025-06-06 05:34:32,050 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 01:35:04] 2025-06-06 05:34:32,271 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 01:35:04] 2025-06-06 05:34:32,344 | INFO     | all payload control threads have been joined
[2025-06-06 01:35:04] 2025-06-06 05:34:32,353 | INFO     | PID=1576491 has CPU usage=13.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-06 01:35:04] 2025-06-06 05:34:32,353 | INFO     | .. there are 20 such processes running
[2025-06-06 01:35:04] 2025-06-06 05:34:32,354 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 01:35:04] 2025-06-06 05:34:32,354 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 01:35:04] 2025-06-06 05:34:32,354 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 01:35:04] 2025-06-06 05:34:32,391 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 01:35:04] 2025-06-06 05:34:32,391 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 01:35:04] 2025-06-06 05:34:32,392 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 01:35:04] 2025-06-06 05:34:32,392 | INFO     | will abort loop
[2025-06-06 01:35:04] 2025-06-06 05:34:33,049 | INFO     | all data control threads have been joined
[2025-06-06 01:35:04] 2025-06-06 05:34:33,056 | INFO     | [job] retrieve thread has finished
[2025-06-06 01:35:04] 2025-06-06 05:34:33,351 | INFO     | [payload] control thread has finished
[2025-06-06 01:35:04] 2025-06-06 05:34:33,376 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 01:35:04] 2025-06-06 05:34:33,397 | INFO     | [job] job monitor thread has finished
[2025-06-06 01:35:04] 2025-06-06 05:34:33,522 | INFO     | [payload] failed_post thread has finished
[2025-06-06 01:35:04] 2025-06-06 05:34:33,539 | INFO     | [job] validate thread has finished
[2025-06-06 01:35:04] 2025-06-06 05:34:33,664 | INFO     | all job control threads have been joined
[2025-06-06 01:35:04] 2025-06-06 05:34:33,664 | INFO     | [payload] validate_post thread has finished
[2025-06-06 01:35:04] 2025-06-06 05:34:33,675 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 01:35:04] 2025-06-06 05:34:33,837 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 01:35:04] 2025-06-06 05:34:33,962 | INFO     | [data] copytool_in thread has finished
[2025-06-06 01:35:04] 2025-06-06 05:34:34,055 | INFO     | [data] control thread has finished
[2025-06-06 01:35:04] 2025-06-06 05:34:34,285 | INFO     | [data] copytool_out thread has finished
[2025-06-06 01:35:04] 2025-06-06 05:34:34,420 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 01:35:04] 2025-06-06 05:34:34,671 | INFO     | [job] control thread has finished
[2025-06-06 01:35:04] 2025-06-06 05:34:34,988 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 01:35:04] 2025-06-06 05:34:35,994 | INFO     | [job] queue monitor thread has finished
[2025-06-06 01:35:04] 2025-06-06 05:34:36,059 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 01:35:04] 2025-06-06 05:34:38,114 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140476803479360)>', '<ExcThread(monitor, started 140475629565696)>']
[2025-06-06 01:35:04] 2025-06-06 05:34:38,393 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 01:35:04] 2025-06-06 05:34:38,393 | INFO     | [monitor] control thread has ended
[2025-06-06 01:35:04] 2025-06-06 05:34:43,140 | INFO     | all workflow threads have been joined
[2025-06-06 01:35:04] 2025-06-06 05:34:43,145 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 01:35:04] 2025-06-06 05:34:43,145 | INFO     | traces error code: 0
[2025-06-06 01:35:04] 2025-06-06 05:34:43,146 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 01:35:04] 2025-06-06 05:34:43,485 [wrapper] ==== pilot stdout END ====
[2025-06-06 01:35:04] 2025-06-06 05:34:43,527 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 01:35:04] 2025-06-06 05:34:43,559 [wrapper] pilotpid: 1576491
[2025-06-06 01:35:04] 2025-06-06 05:34:43,563 [wrapper] Pilot exit status: 0
[2025-06-06 01:35:04] 2025-06-06 05:34:43,627 [wrapper] pandaids: 6668863073
[2025-06-06 01:35:04] 2025-06-06 05:34:43,811 [wrapper] cleanup supervisor_pilot 2272982 1576492
[2025-06-06 01:35:04] 2025-06-06 05:34:43,815 [wrapper] Test setup, not cleaning
[2025-06-06 01:35:04] 2025-06-06 05:34:43,818 [wrapper] apfmon messages muted
[2025-06-06 01:35:04] 2025-06-06 05:34:43,821 [wrapper] ==== wrapper stdout END ====
[2025-06-06 01:35:04] 2025-06-06 05:34:43,824 [wrapper] ==== wrapper stderr END ====
[2025-06-06 01:35:04]  *** Error codes and diagnostics ***
[2025-06-06 01:35:04]     "exeErrorCode": 0,
[2025-06-06 01:35:04]     "exeErrorDiag": "",
[2025-06-06 01:35:04]     "pilotErrorCode": 0,
[2025-06-06 01:35:04]     "pilotErrorDiag": "",
[2025-06-06 01:35:04]  *** Listing of results directory ***
[2025-06-06 01:35:04] total 418152
[2025-06-06 01:35:04] -rw-r--r--. 1 boincer umatlas    495897 May 28 15:50 pilot3.tar.gz
[2025-06-06 01:35:04] -rwx------. 1 boincer umatlas     37140 May 28 16:01 runpilot2-wrapper.sh
[2025-06-06 01:35:04] -rw-r--r--. 1 boincer umatlas      5111 May 28 16:01 queuedata.json
[2025-06-06 01:35:04] -rw-r--r--. 1 boincer umatlas       100 Jun  5 22:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 01:35:04] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 22:49 run_atlas
[2025-06-06 01:35:04] -rw-r--r--. 1 boincer umatlas       105 Jun  5 22:49 job.xml
[2025-06-06 01:35:04] -rw-r--r--. 2 boincer umatlas 223742323 Jun  5 22:49 EVNT.44871834._003493.pool.root.1
[2025-06-06 01:35:04] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 22:49 shared
[2025-06-06 01:35:04] -rw-r--r--. 2 boincer umatlas    508877 Jun  5 22:49 input.tar.gz
[2025-06-06 01:35:04] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 22:49 start_atlas.sh
[2025-06-06 01:35:04] -rw-r--r--. 1 boincer umatlas         0 Jun  5 22:49 boinc_lockfile
[2025-06-06 01:35:04] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 22:49 pandaJob.out
[2025-06-06 01:35:04] -rw-------. 1 boincer umatlas    987721 Jun  5 22:49 agis_schedconf.cvmfs.json
[2025-06-06 01:35:04] -rw-------. 1 boincer umatlas   1598969 Jun  5 22:49 agis_ddmendpoints.agis.ALL.json
[2025-06-06 01:35:04] drwx------. 4 boincer umatlas      4096 Jun  5 22:49 pilot3
[2025-06-06 01:35:04] -rw-r--r--. 1 boincer umatlas      6672 Jun  6 01:28 init_data.xml
[2025-06-06 01:35:04] -rw-------. 1 boincer umatlas 198109635 Jun  6 01:33 HITS.44871837._089767.pool.root.1
[2025-06-06 01:35:04] -rw-r--r--. 1 boincer umatlas       530 Jun  6 01:33 boinc_task_state.xml
[2025-06-06 01:35:04] -rw-------. 1 boincer umatlas        95 Jun  6 01:33 pilot_heartbeat.json
[2025-06-06 01:35:04] -rw-------. 1 boincer umatlas      1057 Jun  6 01:34 memory_monitor_summary.json
[2025-06-06 01:35:04] -rw-------. 1 boincer umatlas    377023 Jun  6 01:34 log.44871837._089767.job.log.tgz.1
[2025-06-06 01:35:04] -rw-------. 1 boincer umatlas      7741 Jun  6 01:34 heartbeat.json
[2025-06-06 01:35:04] -rw-------. 1 boincer umatlas      4935 Jun  6 01:34 pilotlog.txt
[2025-06-06 01:35:04] -rw-------. 1 boincer umatlas    873097 Jun  6 01:34 log.44871837._089767.job.log.1
[2025-06-06 01:35:04] -rw-------. 1 boincer umatlas       357 Jun  6 01:34 output.list
[2025-06-06 01:35:04] -rw-r--r--. 1 boincer umatlas       620 Jun  6 01:34 runtime_log
[2025-06-06 01:35:04] -rw-------. 1 boincer umatlas   1269760 Jun  6 01:34 result.tar.gz
[2025-06-06 01:35:04] -rw-r--r--. 1 boincer umatlas      8646 Jun  6 01:34 runtime_log.err
[2025-06-06 01:35:04] -rw-------. 1 boincer umatlas       655 Jun  6 01:34 JxCODmI9be7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8zcKDmyM4blm.diag
[2025-06-06 01:35:04] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 01:35 boinc_mmap_file
[2025-06-06 01:35:04] -rw-r--r--. 1 boincer umatlas        27 Jun  6 01:35 wrapper_checkpoint.txt
[2025-06-06 01:35:04] -rw-r--r--. 1 boincer umatlas     20983 Jun  6 01:35 stderr.txt
[2025-06-06 01:35:04] HITS file was successfully produced:
[2025-06-06 01:35:04] -rw-------. 1 boincer umatlas 198109635 Jun  6 01:33 shared/HITS.pool.root.1
[2025-06-06 01:35:04]  *** Contents of shared directory: ***
[2025-06-06 01:35:04] total 413728
[2025-06-06 01:35:04] -rw-r--r--. 2 boincer umatlas 223742323 Jun  5 22:49 ATLAS.root_0
[2025-06-06 01:35:04] -rw-r--r--. 2 boincer umatlas    508877 Jun  5 22:49 input.tar.gz
[2025-06-06 01:35:04] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 22:49 start_atlas.sh
[2025-06-06 01:35:04] -rw-------. 1 boincer umatlas 198109635 Jun  6 01:33 HITS.pool.root.1
[2025-06-06 01:35:04] -rw-------. 1 boincer umatlas   1269760 Jun  6 01:34 result.tar.gz
01:35:06 (1572754): run_atlas exited; CPU time 59225.270394
01:35:06 (1572754): called boinc_finish(0)

</stderr_txt>
]]>

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