Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:47:43 (703004): wrapper (7.7.26015): starting
21:47:43 (703004): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 21:47:43] Arguments: --nthreads 12
[2025-06-05 21:47:43] Threads: 12
[2025-06-05 21:47:43] Checking for CVMFS
[2025-06-05 21:47:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 21:47:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 21:47:43] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 21:47:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 21:47:43] 2.12.6.0 504633 25501 430300 146838 0 546 21752386 32935936 10755 16776704 0 107345287 99.627 108401055 32023 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 21:47:43] CVMFS is ok
[2025-06-05 21:47:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 21:47:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 21:47:43] Further information can be found at the LHC@home message board.
[2025-06-05 21:47:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 21:47:43] Checking for apptainer binary...
[2025-06-05 21:47:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 21:47:43] Running /usr/bin/apptainer --version
[2025-06-05 21:47:43] apptainer version 1.4.1-1.el9
[2025-06-05 21:47:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 21:47:43] c6-5-37-2.aglt2.org
[2025-06-05 21:47:43] apptainer works
[2025-06-05 21:47:43] Set ATHENA_PROC_NUMBER=12
[2025-06-05 21:47:43] Set ATHENA_CORE_NUMBER=12
[2025-06-05 21:47:43] Starting ATLAS job with PandaID=6668443534
[2025-06-05 21:47:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 23:07:26]  *** The last 200 lines of the pilot log: ***
[2025-06-05 23:07:26]  status=None
[2025-06-05 23:07:26]  status_code=0
[2025-06-05 23:07:26]  storage_token=
[2025-06-05 23:07:26]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6668443534/log.44871837._084877.job.log.tgz.1
[2025-06-05 23:07:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/02/bc/log.44871837._084877.job.log.tgz.1
[2025-06-05 23:07:26]  workdir=None
[2025-06-05 23:07:26] ]
[2025-06-05 23:07:26] 2025-06-06 03:06:58,288 | INFO     | transferring file log.44871837._084877.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6668443534/log.44871837._084877.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 23:07:26] 2025-06-06 03:06:58,288 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6668443534/log.44871837._084877.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._084877.job
[2025-06-05 23:07:26] 2025-06-06 03:06:58,305 | INFO     | adding to output.list: log.44871837._084877.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/02/bc/log.44871837._084877.job.log.tg
[2025-06-05 23:07:26] 2025-06-06 03:06:58,306 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 23:07:26] 2025-06-06 03:06:58,306 | INFO     | summary of transferred files:
[2025-06-05 23:07:26] 2025-06-06 03:06:58,306 | INFO     |  -- lfn=log.44871837._084877.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 23:07:26] 2025-06-06 03:06:58,307 | INFO     | stage-out finished correctly
[2025-06-05 23:07:26] 2025-06-06 03:07:01,146 | WARNING  | process 718448 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 23:07:26] 2025-06-06 03:07:01,147 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668443534/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 23:07:26] 2025-06-06 03:07:01,148 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668443534/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 23:07:26] 2025-06-06 03:07:01,149 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4040684 B
[2025-06-05 23:07:26] 2025-06-06 03:07:01,149 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16028 B
[2025-06-05 23:07:26] 2025-06-06 03:07:01,149 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 23:07:26] 2025-06-06 03:07:01,163 | INFO     | sufficient remaining disk space (76453773312 B)
[2025-06-05 23:07:26] 2025-06-06 03:07:01,164 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-05 23:07:26] 2025-06-06 03:07:01,164 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6668443534: 4340626 B (within 2537553920 B limit)
[2025-06-05 23:07:26] 2025-06-06 03:07:01,165 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6668443534/HITS.44871837._084877.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-05 23:07:26] 2025-06-06 03:07:01,165 | INFO     | total size of present files: 0 B (workdir size: 4340626 B)
[2025-06-05 23:07:26] 2025-06-06 03:07:01,165 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6668443534/HITS.44871837._084877.pool.root.1 since it does not exist
[2025-06-05 23:07:26] 2025-06-06 03:07:01,410 | INFO     | number of running child processes to parent process 718448: 1
[2025-06-05 23:07:26] 2025-06-06 03:07:01,410 | INFO     | maximum number of monitored processes: 6
[2025-06-05 23:07:26] 2025-06-06 03:07:01,764 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 23:07:26] 2025-06-06 03:07:02,726 | INFO     | job 6668443534 has state=finished
[2025-06-05 23:07:26] 2025-06-06 03:07:02,727 | INFO     | preparing for final server update for job 6668443534 in state='finished'
[2025-06-05 23:07:26] 2025-06-06 03:07:02,727 | INFO     | this job has now completed (state=finished)
[2025-06-05 23:07:26] 2025-06-06 03:07:02,727 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 23:07:26] 2025-06-06 03:07:02,727 | INFO     | log transfer has been attempted: DONE
[2025-06-05 23:07:26] 2025-06-06 03:07:02,727 | INFO     | job 6668443534 has finished - writing final server update
[2025-06-05 23:07:26] 2025-06-06 03:07:02,728 | INFO     | total number of processed events: 400 (read)
[2025-06-05 23:07:26] 2025-06-06 03:07:02,742 | INFO     | executing command: lscpu
[2025-06-05 23:07:26] 2025-06-06 03:07:02,798 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 23:07:26] 2025-06-06 03:07:03,913 | INFO     | monitor loop #341: job 0:6668443534 is in state 'finished'
[2025-06-05 23:07:26] 2025-06-06 03:07:03,914 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 23:07:26] 2025-06-06 03:07:06,231 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 23:07:26] 2025-06-06 03:07:06,231 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668443534/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 23:07:26] 2025-06-06 03:07:06,232 | INFO     | extracted standard info from prmon json
[2025-06-05 23:07:26] 2025-06-06 03:07:06,232 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 23:07:26] 2025-06-06 03:07:06,232 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 23:07:26] 2025-06-06 03:07:06,233 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 23:07:26] 2025-06-06 03:07:06,233 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 23:07:26] 2025-06-06 03:07:06,235 | INFO     | fitting pss+swap vs Time
[2025-06-05 23:07:26] 2025-06-06 03:07:06,235 | INFO     | sum of square deviations: 110970350.64788738
[2025-06-05 23:07:26] 2025-06-06 03:07:06,235 | INFO     | sum of deviations: -9857975544.676056
[2025-06-05 23:07:26] 2025-06-06 03:07:06,235 | INFO     | mean x: 1749176935.0704226
[2025-06-05 23:07:26] 2025-06-06 03:07:06,236 | INFO     | mean y: 2477498.5352112674
[2025-06-05 23:07:26] 2025-06-06 03:07:06,236 | INFO     | -- intersect: 155389419583.1768
[2025-06-05 23:07:26] 2025-06-06 03:07:06,236 | INFO     | intersect: 155389419583.1768
[2025-06-05 23:07:26] 2025-06-06 03:07:06,236 | INFO     | chi2: 0.14427053275200546
[2025-06-05 23:07:26] 2025-06-06 03:07:06,236 | INFO     | -- intersect: 155389419583.1768
[2025-06-05 23:07:26] 2025-06-06 03:07:06,236 | INFO     | current memory leak: -88.83 B/s (using 71 data points, chi2=0.14)
[2025-06-05 23:07:26] 2025-06-06 03:07:06,237 | INFO     | ..............................
[2025-06-05 23:07:26] 2025-06-06 03:07:06,237 | INFO     | . Timing measurements:
[2025-06-05 23:07:26] 2025-06-06 03:07:06,237 | INFO     | . get job = 0 s
[2025-06-05 23:07:26] 2025-06-06 03:07:06,237 | INFO     | . initial setup = 2 s
[2025-06-05 23:07:26] 2025-06-06 03:07:06,237 | INFO     | . payload setup = 5 s
[2025-06-05 23:07:26] 2025-06-06 03:07:06,237 | INFO     | . stage-in = 0 s
[2025-06-05 23:07:26] 2025-06-06 03:07:06,237 | INFO     | . payload execution = 4725 s
[2025-06-05 23:07:26] 2025-06-06 03:07:06,237 | INFO     | . stage-out = 0 s
[2025-06-05 23:07:26] 2025-06-06 03:07:06,237 | INFO     | . log creation = 0 s
[2025-06-05 23:07:26] 2025-06-06 03:07:06,237 | INFO     | ..............................
[2025-06-05 23:07:26] 2025-06-06 03:07:06,398 | INFO     | 
[2025-06-05 23:07:26] 2025-06-06 03:07:06,399 | INFO     | job summary report
[2025-06-05 23:07:26] 2025-06-06 03:07:06,399 | INFO     | --------------------------------------------------
[2025-06-05 23:07:26] 2025-06-06 03:07:06,399 | INFO     | PanDA job id: 6668443534
[2025-06-05 23:07:26] 2025-06-06 03:07:06,399 | INFO     | task id: 44871837
[2025-06-05 23:07:26] 2025-06-06 03:07:06,399 | INFO     | errors: (none)
[2025-06-05 23:07:26] 2025-06-06 03:07:06,399 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 23:07:26] 2025-06-06 03:07:06,399 | INFO     | pilot state: finished 
[2025-06-05 23:07:26] 2025-06-06 03:07:06,399 | INFO     | transexitcode: 0
[2025-06-05 23:07:26] 2025-06-06 03:07:06,399 | INFO     | exeerrorcode: 0
[2025-06-05 23:07:26] 2025-06-06 03:07:06,399 | INFO     | exeerrordiag: 
[2025-06-05 23:07:26] 2025-06-06 03:07:06,399 | INFO     | exitcode: 0
[2025-06-05 23:07:26] 2025-06-06 03:07:06,399 | INFO     | exitmsg: OK
[2025-06-05 23:07:26] 2025-06-06 03:07:06,399 | INFO     | cpuconsumptiontime: 47282 s
[2025-06-05 23:07:26] 2025-06-06 03:07:06,399 | INFO     | nevents: 400
[2025-06-05 23:07:26] 2025-06-06 03:07:06,400 | INFO     | neventsw: 0
[2025-06-05 23:07:26] 2025-06-06 03:07:06,400 | INFO     | pid: 718448
[2025-06-05 23:07:26] 2025-06-06 03:07:06,400 | INFO     | pgrp: 718448
[2025-06-05 23:07:26] 2025-06-06 03:07:06,400 | INFO     | corecount: 12
[2025-06-05 23:07:26] 2025-06-06 03:07:06,400 | INFO     | event service: False
[2025-06-05 23:07:26] 2025-06-06 03:07:06,400 | INFO     | sizes: {0: 2397392, 3: 2397598, 10: 2397626, 4730: 2423722, 4731: 2432663, 4735: 2432747, 4739: 2433045}
[2025-06-05 23:07:26] 2025-06-06 03:07:06,400 | INFO     | --------------------------------------------------
[2025-06-05 23:07:26] 2025-06-06 03:07:06,400 | INFO     | 
[2025-06-05 23:07:26] 2025-06-06 03:07:06,400 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 23:07:26] 2025-06-06 03:07:06,417 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 23:07:26] 2025-06-06 03:07:06,418 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 23:07:26] 2025-06-06 03:07:06,418 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 23:07:26] 2025-06-06 03:07:06,418 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 23:07:26] 2025-06-06 03:07:06,418 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 23:07:26] 2025-06-06 03:07:06,418 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 23:07:26] 2025-06-06 03:07:06,418 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 23:07:26] 2025-06-06 03:07:06,418 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 23:07:26] 2025-06-06 03:07:06,418 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 23:07:26] 2025-06-06 03:07:06,418 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 23:07:26] 2025-06-06 03:07:06,418 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 23:07:26] 2025-06-06 03:07:06,418 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 23:07:26] 2025-06-06 03:07:06,419 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 23:07:26] 2025-06-06 03:07:06,419 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 23:07:26] 2025-06-06 03:07:06,419 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 23:07:26] 2025-06-06 03:07:06,419 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 23:07:26] 2025-06-06 03:07:06,419 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 23:07:26] 2025-06-06 03:07:06,419 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 23:07:26] 2025-06-06 03:07:06,419 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 23:07:26] 2025-06-06 03:07:06,419 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 23:07:26] 2025-06-06 03:07:06,419 | INFO     | job 6668443534 has completed (purged errors)
[2025-06-05 23:07:26] 2025-06-06 03:07:06,419 | INFO     | overall cleanup function is called
[2025-06-05 23:07:26] 2025-06-06 03:07:07,426 | INFO     | --- collectZombieJob: --- 10, [718448]
[2025-06-05 23:07:26] 2025-06-06 03:07:07,427 | INFO     | zombie collector waiting for pid 718448
[2025-06-05 23:07:26] 2025-06-06 03:07:07,427 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 23:07:26] 2025-06-06 03:07:07,427 | INFO     | collected zombie processes
[2025-06-05 23:07:26] 2025-06-06 03:07:07,427 | INFO     | will attempt to kill all subprocesses of pid=718448
[2025-06-05 23:07:26] 2025-06-06 03:07:07,691 | INFO     | process IDs to be killed: [718448] (in reverse order)
[2025-06-05 23:07:26] 2025-06-06 03:07:07,781 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 23:07:26] 2025-06-06 03:07:07,781 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 23:07:26] 2025-06-06 03:07:07,793 | INFO     | did not find any defunct processes belonging to 718448
[2025-06-05 23:07:26] 2025-06-06 03:07:07,804 | INFO     | did not find any defunct processes belonging to 718448
[2025-06-05 23:07:26] 2025-06-06 03:07:07,805 | INFO     | ready for new job
[2025-06-05 23:07:26] 2025-06-06 03:07:07,805 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 23:07:26] 2025-06-06 03:07:07,806 | INFO     | **************************************
[2025-06-05 23:07:26] 2025-06-06 03:07:07,806 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 23:07:26] 2025-06-06 03:07:07,806 | INFO     | **************************************
[2025-06-05 23:07:26] 2025-06-06 03:07:07,807 | INFO     | 
[2025-06-05 23:07:26] 2025-06-06 03:07:07,822 | INFO     | architecture information:
[2025-06-05 23:07:26] 2025-06-06 03:07:07,823 | INFO     | executing command: cat /etc/os-release
[2025-06-05 23:07:26] 2025-06-06 03:07:07,835 | INFO     | cat /etc/os-release:
[2025-06-05 23:07:26] NAME="CentOS Linux"
[2025-06-05 23:07:26] VERSION="7 (Core)"
[2025-06-05 23:07:26] ID="centos"
[2025-06-05 23:07:26] ID_LIKE="rhel fedora"
[2025-06-05 23:07:26] VERSION_ID="7"
[2025-06-05 23:07:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 23:07:26] ANSI_COLOR="0;31"
[2025-06-05 23:07:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 23:07:26] HOME_URL="https://www.centos.org/"
[2025-06-05 23:07:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 23:07:26] 
[2025-06-05 23:07:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 23:07:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 23:07:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 23:07:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 23:07:26] 
[2025-06-05 23:07:26] 2025-06-06 03:07:07,835 | INFO     | **************************************
[2025-06-05 23:07:26] 2025-06-06 03:07:08,337 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 23:07:26] 2025-06-06 03:07:08,353 | INFO     | sufficient remaining disk space (76457967616 B)
[2025-06-05 23:07:26] 2025-06-06 03:07:08,353 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 23:07:26] 2025-06-06 03:07:08,353 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 23:07:26] 2025-06-06 03:07:08,353 | INFO     | update_server=False
[2025-06-05 23:07:26] 2025-06-06 03:07:08,353 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 23:07:26] 2025-06-06 03:07:08,354 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 23:07:26] 2025-06-06 03:07:08,354 | INFO     | aborting loop
[2025-06-05 23:07:26] 2025-06-06 03:07:08,354 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 23:07:26] 2025-06-06 03:07:08,771 | INFO     | all job control threads have been joined
[2025-06-05 23:07:26] 2025-06-06 03:07:08,773 | INFO     | all payload control threads have been joined
[2025-06-05 23:07:26] 2025-06-06 03:07:08,905 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 23:07:26] 2025-06-06 03:07:08,905 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 23:07:26] 2025-06-06 03:07:08,905 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 23:07:26] 2025-06-06 03:07:08,908 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 23:07:26] 2025-06-06 03:07:09,358 | INFO     | [job] retrieve thread has finished
[2025-06-05 23:07:26] 2025-06-06 03:07:09,359 | INFO     | [job] job monitor thread has finished
[2025-06-05 23:07:26] 2025-06-06 03:07:09,440 | INFO     | all data control threads have been joined
[2025-06-05 23:07:26] 2025-06-06 03:07:09,562 | INFO     | [data] copytool_in thread has finished
[2025-06-05 23:07:26] 2025-06-06 03:07:09,776 | INFO     | [payload] validate_post thread has finished
[2025-06-05 23:07:26] 2025-06-06 03:07:09,777 | INFO     | [job] control thread has finished
[2025-06-05 23:07:26] 2025-06-06 03:07:09,778 | INFO     | [payload] control thread has finished
[2025-06-05 23:07:26] 2025-06-06 03:07:09,928 | INFO     | [job] validate thread has finished
[2025-06-05 23:07:26] 2025-06-06 03:07:10,103 | INFO     | [payload] failed_post thread has finished
[2025-06-05 23:07:26] 2025-06-06 03:07:10,342 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 23:07:26] 2025-06-06 03:07:10,445 | INFO     | [data] control thread has finished
[2025-06-05 23:07:26] 2025-06-06 03:07:10,850 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 23:07:26] 2025-06-06 03:07:10,855 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 23:07:26] 2025-06-06 03:07:10,913 | INFO     | [data] copytool_out thread has finished
[2025-06-05 23:07:26] 2025-06-06 03:07:11,305 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 23:07:26] 2025-06-06 03:07:12,310 | INFO     | [job] queue monitor thread has finished
[2025-06-05 23:07:26] 2025-06-06 03:07:12,359 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 23:07:26] 2025-06-06 03:07:19,318 | INFO     | job.realtimelogging is not enabled
[2025-06-05 23:07:26] 2025-06-06 03:07:20,323 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 23:07:26] 2025-06-06 03:07:21,288 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140437529708352)>', '<ExcThread(monitor, started 140436890965760)>']
[2025-06-05 23:07:26] 2025-06-06 03:07:21,970 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 23:07:26] 2025-06-06 03:07:21,971 | INFO     | [monitor] control thread has ended
[2025-06-05 23:07:26] 2025-06-06 03:07:26,297 | INFO     | all workflow threads have been joined
[2025-06-05 23:07:26] 2025-06-06 03:07:26,297 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 23:07:26] 2025-06-06 03:07:26,297 | INFO     | traces error code: 0
[2025-06-05 23:07:26] 2025-06-06 03:07:26,297 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 23:07:26] 2025-06-06 03:07:26,406 [wrapper] ==== pilot stdout END ====
[2025-06-05 23:07:26] 2025-06-06 03:07:26,408 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 23:07:26] 2025-06-06 03:07:26,411 [wrapper] pilotpid: 709537
[2025-06-05 23:07:26] 2025-06-06 03:07:26,413 [wrapper] Pilot exit status: 0
[2025-06-05 23:07:26] 2025-06-06 03:07:26,422 [wrapper] pandaids: 6668443534
[2025-06-05 23:07:26] 2025-06-06 03:07:26,486 [wrapper] cleanup supervisor_pilot 1102598 709538
[2025-06-05 23:07:26] 2025-06-06 03:07:26,488 [wrapper] Test setup, not cleaning
[2025-06-05 23:07:26] 2025-06-06 03:07:26,490 [wrapper] apfmon messages muted
[2025-06-05 23:07:26] 2025-06-06 03:07:26,492 [wrapper] ==== wrapper stdout END ====
[2025-06-05 23:07:26] 2025-06-06 03:07:26,494 [wrapper] ==== wrapper stderr END ====
[2025-06-05 23:07:26]  *** Error codes and diagnostics ***
[2025-06-05 23:07:26]     "exeErrorCode": 0,
[2025-06-05 23:07:26]     "exeErrorDiag": "",
[2025-06-05 23:07:26]     "pilotErrorCode": 0,
[2025-06-05 23:07:26]     "pilotErrorDiag": "",
[2025-06-05 23:07:26]  *** Listing of results directory ***
[2025-06-05 23:07:26] total 413096
[2025-06-05 23:07:26] -rwx------. 1 boincer umatlas     37140 May 28 09:15 runpilot2-wrapper.sh
[2025-06-05 23:07:26] -rw-r--r--. 1 boincer umatlas      5111 May 28 09:15 queuedata.json
[2025-06-05 23:07:26] -rw-r--r--. 1 boincer umatlas    495897 May 28 09:15 pilot3.tar.gz
[2025-06-05 23:07:26] -rw-r--r--. 1 boincer umatlas       100 Jun  5 21:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 23:07:26] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 21:47 run_atlas
[2025-06-05 23:07:26] -rw-r--r--. 1 boincer umatlas       105 Jun  5 21:47 job.xml
[2025-06-05 23:07:26] -rw-r--r--. 2 boincer umatlas 224874881 Jun  5 21:47 EVNT.44871834._003312.pool.root.1
[2025-06-05 23:07:26] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 21:47 start_atlas.sh
[2025-06-05 23:07:26] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 21:47 shared
[2025-06-05 23:07:26] -rw-r--r--. 2 boincer umatlas    508875 Jun  5 21:47 input.tar.gz
[2025-06-05 23:07:26] -rw-r--r--. 1 boincer umatlas         0 Jun  5 21:47 boinc_lockfile
[2025-06-05 23:07:26] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 21:47 pandaJob.out
[2025-06-05 23:07:26] -rw-------. 1 boincer umatlas    987721 Jun  5 21:47 agis_schedconf.cvmfs.json
[2025-06-05 23:07:26] -rw-------. 1 boincer umatlas   1598969 Jun  5 21:47 agis_ddmendpoints.agis.ALL.json
[2025-06-05 23:07:26] drwx------. 4 boincer umatlas      4096 Jun  5 21:47 pilot3
[2025-06-05 23:07:26] -rw-r--r--. 1 boincer umatlas      6842 Jun  5 23:03 init_data.xml
[2025-06-05 23:07:26] -rw-------. 1 boincer umatlas        95 Jun  5 23:06 pilot_heartbeat.json
[2025-06-05 23:07:26] -rw-------. 1 boincer umatlas 192659408 Jun  5 23:06 HITS.44871837._084877.pool.root.1
[2025-06-05 23:07:26] -rw-r--r--. 1 boincer umatlas       529 Jun  5 23:06 boinc_task_state.xml
[2025-06-05 23:07:26] -rw-------. 1 boincer umatlas      1038 Jun  5 23:06 memory_monitor_summary.json
[2025-06-05 23:07:26] -rw-------. 1 boincer umatlas    361820 Jun  5 23:06 log.44871837._084877.job.log.tgz.1
[2025-06-05 23:07:26] -rw-------. 1 boincer umatlas      7723 Jun  5 23:07 heartbeat.json
[2025-06-05 23:07:26] -rw-r--r--. 1 boincer umatlas        27 Jun  5 23:07 wrapper_checkpoint.txt
[2025-06-05 23:07:26] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 23:07 boinc_mmap_file
[2025-06-05 23:07:26] -rw-------. 1 boincer umatlas      4425 Jun  5 23:07 pilotlog.txt
[2025-06-05 23:07:26] -rw-------. 1 boincer umatlas    459395 Jun  5 23:07 log.44871837._084877.job.log.1
[2025-06-05 23:07:26] -rw-------. 1 boincer umatlas       357 Jun  5 23:07 output.list
[2025-06-05 23:07:26] -rw-r--r--. 1 boincer umatlas       620 Jun  5 23:07 runtime_log
[2025-06-05 23:07:26] -rw-------. 1 boincer umatlas    839680 Jun  5 23:07 result.tar.gz
[2025-06-05 23:07:26] -rw-r--r--. 1 boincer umatlas      8666 Jun  5 23:07 runtime_log.err
[2025-06-05 23:07:26] -rw-------. 1 boincer umatlas       654 Jun  5 23:07 m5EMDmOoVe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmUYTKDm36Yajm.diag
[2025-06-05 23:07:26] -rw-r--r--. 1 boincer umatlas     22212 Jun  5 23:07 stderr.txt
[2025-06-05 23:07:26] HITS file was successfully produced:
[2025-06-05 23:07:26] -rw-------. 1 boincer umatlas 192659408 Jun  5 23:06 shared/HITS.pool.root.1
[2025-06-05 23:07:26]  *** Contents of shared directory: ***
[2025-06-05 23:07:26] total 409092
[2025-06-05 23:07:26] -rw-r--r--. 2 boincer umatlas 224874881 Jun  5 21:47 ATLAS.root_0
[2025-06-05 23:07:26] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 21:47 start_atlas.sh
[2025-06-05 23:07:26] -rw-r--r--. 2 boincer umatlas    508875 Jun  5 21:47 input.tar.gz
[2025-06-05 23:07:26] -rw-------. 1 boincer umatlas 192659408 Jun  5 23:06 HITS.pool.root.1
[2025-06-05 23:07:26] -rw-------. 1 boincer umatlas    839680 Jun  5 23:07 result.tar.gz
23:07:28 (703004): run_atlas exited; CPU time 47393.061137
23:07:28 (703004): called boinc_finish(0)

</stderr_txt>
]]>

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