Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:23:39 (4141795): wrapper (7.7.26015): starting
11:23:39 (4141795): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 11:23:39] Arguments: --nthreads 4
[2025-06-06 11:23:39] Threads: 4
[2025-06-06 11:23:39] Checking for CVMFS
[2025-06-06 11:23:39] No cvmfs_config command found, will try listing directly
[2025-06-06 11:23:39] CVMFS is ok
[2025-06-06 11:23:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 11:23:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 11:23:39] Further information can be found at the LHC@home message board.
[2025-06-06 11:23:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 11:23:39] Checking for apptainer binary...
[2025-06-06 11:23:39] which: no apptainer in ((null))
[2025-06-06 11:23:39] apptainer is not installed, using version from CVMFS
[2025-06-06 11:23:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 11:23:39] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2025-06-06 11:23:39] apptainer works
[2025-06-06 11:23:39] Set ATHENA_PROC_NUMBER=4
[2025-06-06 11:23:39] Set ATHENA_CORE_NUMBER=4
[2025-06-06 11:23:39] Starting ATLAS job with PandaID=6681397137
[2025-06-06 11:23:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 13:55:44]  *** The last 200 lines of the pilot log: ***
[2025-06-06 13:55:44] 2025-06-06 11:54:06,763 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 13:55:44] 2025-06-06 11:54:06,763 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 13:55:44] 2025-06-06 11:54:06,763 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 13:55:44] 2025-06-06 11:54:06,765 | INFO     | fitting pss+swap vs Time
[2025-06-06 13:55:44] 2025-06-06 11:54:06,765 | INFO     | sum of square deviations: 1005179777.0
[2025-06-06 13:55:44] 2025-06-06 11:54:06,766 | INFO     | sum of deviations: -7904930159.000002
[2025-06-06 13:55:44] 2025-06-06 11:54:06,766 | INFO     | mean x: 1749206332.5
[2025-06-06 13:55:44] 2025-06-06 11:54:06,766 | INFO     | mean y: 2354145.810810811
[2025-06-06 13:55:44] 2025-06-06 11:54:06,766 | INFO     | -- intersect: 13758454505.650257
[2025-06-06 13:55:44] 2025-06-06 11:54:06,766 | INFO     | intersect: 13758454505.650257
[2025-06-06 13:55:44] 2025-06-06 11:54:06,766 | INFO     | chi2: 1.945914770821613
[2025-06-06 13:55:44] 2025-06-06 11:54:06,767 | INFO     | sum of square deviations: 906703512.0
[2025-06-06 13:55:44] 2025-06-06 11:54:06,767 | INFO     | sum of deviations: 1354654206.0000005
[2025-06-06 13:55:44] 2025-06-06 11:54:06,767 | INFO     | mean x: 1749206180.0
[2025-06-06 13:55:44] 2025-06-06 11:54:06,767 | INFO     | mean y: 2368088.2587412586
[2025-06-06 13:55:44] 2025-06-06 11:54:06,767 | INFO     | -- intersect: -2611021490.073667
[2025-06-06 13:55:44] 2025-06-06 11:54:06,767 | INFO     | intersect: -2611021490.073667
[2025-06-06 13:55:44] 2025-06-06 11:54:06,768 | INFO     | chi2: 1.1449056751810085
[2025-06-06 13:55:44] 2025-06-06 11:54:06,768 | INFO     | current chi2=1.1449056751810085 (change=41.16362687880717 %)
[2025-06-06 13:55:44] 2025-06-06 11:54:06,768 | INFO     | sum of square deviations: 814878534.5
[2025-06-06 13:55:44] 2025-06-06 11:54:06,768 | INFO     | sum of deviations: 1371730027.5000007
[2025-06-06 13:55:44] 2025-06-06 11:54:06,768 | INFO     | mean x: 1749206027.5
[2025-06-06 13:55:44] 2025-06-06 11:54:06,768 | INFO     | mean y: 2368116.65942029
[2025-06-06 13:55:44] 2025-06-06 11:54:06,768 | INFO     | -- intersect: -2942166965.0972853
[2025-06-06 13:55:44] 2025-06-06 11:54:06,768 | INFO     | intersect: -2942166965.0972853
[2025-06-06 13:55:44] 2025-06-06 11:54:06,769 | INFO     | chi2: 1.1453436633429273
[2025-06-06 13:55:44] 2025-06-06 11:54:06,769 | INFO     | current chi2=1.1453436633429273 (change=-0.03825539268547262 %)
[2025-06-06 13:55:44] 2025-06-06 11:54:06,769 | INFO     | right removable region: 137
[2025-06-06 13:55:44] 2025-06-06 11:54:06,769 | INFO     | sum of square deviations: 906703512.0
[2025-06-06 13:55:44] 2025-06-06 11:54:06,769 | INFO     | sum of deviations: -22441703519.0
[2025-06-06 13:55:44] 2025-06-06 11:54:06,769 | INFO     | mean x: 1749206485.0
[2025-06-06 13:55:44] 2025-06-06 11:54:06,769 | INFO     | mean y: 2376170.846153846
[2025-06-06 13:55:44] 2025-06-06 11:54:06,770 | INFO     | -- intersect: 43296763818.35107
[2025-06-06 13:55:44] 2025-06-06 11:54:06,770 | INFO     | intersect: 43296763818.35107
[2025-06-06 13:55:44] 2025-06-06 11:54:06,770 | INFO     | chi2: 0.8516939693791901
[2025-06-06 13:55:44] 2025-06-06 11:54:06,770 | INFO     | current chi2=0.8516939693791901 (change=56.231692047869906 %)
[2025-06-06 13:55:44] 2025-06-06 11:54:06,770 | INFO     | sum of square deviations: 814878534.5
[2025-06-06 13:55:44] 2025-06-06 11:54:06,770 | INFO     | sum of deviations: -21412824235.499996
[2025-06-06 13:55:44] 2025-06-06 11:54:06,771 | INFO     | mean x: 1749206637.5
[2025-06-06 13:55:44] 2025-06-06 11:54:06,771 | INFO     | mean y: 2374464.4420289854
[2025-06-06 13:55:44] 2025-06-06 11:54:06,771 | INFO     | -- intersect: 45966837503.51286
[2025-06-06 13:55:44] 2025-06-06 11:54:06,771 | INFO     | intersect: 45966837503.51286
[2025-06-06 13:55:44] 2025-06-06 11:54:06,771 | INFO     | chi2: 0.8516076543371217
[2025-06-06 13:55:44] 2025-06-06 11:54:06,771 | INFO     | current chi2=0.8516076543371217 (change=0.010134513706991297 %)
[2025-06-06 13:55:44] 2025-06-06 11:54:06,771 | INFO     | left removable region: 20
[2025-06-06 13:55:44] 2025-06-06 11:54:06,771 | INFO     | sum of square deviations: 496597218.0
[2025-06-06 13:55:44] 2025-06-06 11:54:06,771 | INFO     | sum of deviations: -8825617920.999998
[2025-06-06 13:55:44] 2025-06-06 11:54:06,772 | INFO     | mean x: 1749206607.0
[2025-06-06 13:55:44] 2025-06-06 11:54:06,772 | INFO     | mean y: 2384767.1623931625
[2025-06-06 13:55:44] 2025-06-06 11:54:06,772 | INFO     | -- intersect: 31089609219.295353
[2025-06-06 13:55:44] 2025-06-06 11:54:06,772 | INFO     | intersect: 31089609219.295353
[2025-06-06 13:55:44] 2025-06-06 11:54:06,772 | INFO     | chi2: 0.02120749401381552
[2025-06-06 13:55:44] 2025-06-06 11:54:06,772 | INFO     | -- intersect: 31089609219.295353
[2025-06-06 13:55:44] 2025-06-06 11:54:06,772 | INFO     | current memory leak: -17.77 B/s (using 117 data points, chi2=0.02)
[2025-06-06 13:55:44] 2025-06-06 11:54:06,772 | INFO     | could have reported an average CPU frequency of 2890 MHz (8 samples)
[2025-06-06 13:55:44] 2025-06-06 11:54:06,773 | INFO     | ..............................
[2025-06-06 13:55:44] 2025-06-06 11:54:06,773 | INFO     | . Timing measurements:
[2025-06-06 13:55:44] 2025-06-06 11:54:06,773 | INFO     | . get job = 0 s
[2025-06-06 13:55:44] 2025-06-06 11:54:06,773 | INFO     | . initial setup = 1 s
[2025-06-06 13:55:44] 2025-06-06 11:54:06,773 | INFO     | . payload setup = 4 s
[2025-06-06 13:55:44] 2025-06-06 11:54:06,773 | INFO     | . stage-in = 0 s
[2025-06-06 13:55:44] 2025-06-06 11:54:06,773 | INFO     | . payload execution = 8992 s
[2025-06-06 13:55:44] 2025-06-06 11:54:06,773 | INFO     | . stage-out = 0 s
[2025-06-06 13:55:44] 2025-06-06 11:54:06,773 | INFO     | . log creation = 0 s
[2025-06-06 13:55:44] 2025-06-06 11:54:06,773 | INFO     | ..............................
[2025-06-06 13:55:44] 2025-06-06 11:54:06,835 | INFO     | 
[2025-06-06 13:55:44] 2025-06-06 11:54:06,836 | INFO     | job summary report
[2025-06-06 13:55:44] 2025-06-06 11:54:06,836 | INFO     | --------------------------------------------------
[2025-06-06 13:55:44] 2025-06-06 11:54:06,836 | INFO     | PanDA job id: 6681397137
[2025-06-06 13:55:44] 2025-06-06 11:54:06,836 | INFO     | task id: 44871837
[2025-06-06 13:55:44] 2025-06-06 11:54:06,836 | INFO     | errors: (none)
[2025-06-06 13:55:44] 2025-06-06 11:54:06,836 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 13:55:44] 2025-06-06 11:54:06,836 | INFO     | pilot state: finished 
[2025-06-06 13:55:44] 2025-06-06 11:54:06,836 | INFO     | transexitcode: 0
[2025-06-06 13:55:44] 2025-06-06 11:54:06,837 | INFO     | exeerrorcode: 0
[2025-06-06 13:55:44] 2025-06-06 11:54:06,837 | INFO     | exeerrordiag: 
[2025-06-06 13:55:44] 2025-06-06 11:54:06,837 | INFO     | exitcode: 0
[2025-06-06 13:55:44] 2025-06-06 11:54:06,837 | INFO     | exitmsg: OK
[2025-06-06 13:55:44] 2025-06-06 11:54:06,837 | INFO     | cpuconsumptiontime: 34786 s
[2025-06-06 13:55:44] 2025-06-06 11:54:06,837 | INFO     | nevents: 400
[2025-06-06 13:55:44] 2025-06-06 11:54:06,837 | INFO     | neventsw: 0
[2025-06-06 13:55:44] 2025-06-06 11:54:06,837 | INFO     | pid: 4164401
[2025-06-06 13:55:44] 2025-06-06 11:54:06,837 | INFO     | pgrp: 4164401
[2025-06-06 13:55:44] 2025-06-06 11:54:06,837 | INFO     | corecount: 4
[2025-06-06 13:55:44] 2025-06-06 11:54:06,837 | INFO     | event service: False
[2025-06-06 13:55:44] 2025-06-06 11:54:06,837 | INFO     | sizes: {0: 2396852, 1: 2397719, 4: 2397981, 12: 2398009, 9001: 2426369, 9002: 2435332, 9004: 2435516, 9007: 2435710}
[2025-06-06 13:55:44] 2025-06-06 11:54:06,837 | INFO     | --------------------------------------------------
[2025-06-06 13:55:44] 2025-06-06 11:54:06,838 | INFO     | 
[2025-06-06 13:55:44] 2025-06-06 11:54:06,838 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2025-06-06 13:55:44] 2025-06-06 11:54:06,852 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 13:55:44] 2025-06-06 11:54:06,853 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 13:55:44] 2025-06-06 11:54:06,853 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 13:55:44] 2025-06-06 11:54:06,853 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 13:55:44] 2025-06-06 11:54:06,853 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 13:55:44] 2025-06-06 11:54:06,853 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 13:55:44] 2025-06-06 11:54:06,853 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 13:55:44] 2025-06-06 11:54:06,853 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 13:55:44] 2025-06-06 11:54:06,853 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 13:55:44] 2025-06-06 11:54:06,853 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 13:55:44] 2025-06-06 11:54:06,853 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 13:55:44] 2025-06-06 11:54:06,853 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 13:55:44] 2025-06-06 11:54:06,853 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 13:55:44] 2025-06-06 11:54:06,853 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 13:55:44] 2025-06-06 11:54:06,853 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 13:55:44] 2025-06-06 11:54:06,853 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 13:55:44] 2025-06-06 11:54:06,853 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 13:55:44] 2025-06-06 11:54:06,853 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 13:55:44] 2025-06-06 11:54:06,853 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 13:55:44] 2025-06-06 11:54:06,854 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 13:55:44] 2025-06-06 11:54:06,854 | INFO     | job 6681397137 has completed (purged errors)
[2025-06-06 13:55:44] 2025-06-06 11:54:06,854 | INFO     | overall cleanup function is called
[2025-06-06 13:55:44] 2025-06-06 11:54:07,838 | INFO     | PID=4148274 has CPU usage=9.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-06 13:55:44] 2025-06-06 11:54:07,860 | INFO     | --- collectZombieJob: --- 10, [4164401]
[2025-06-06 13:55:44] 2025-06-06 11:54:07,861 | INFO     | zombie collector waiting for pid 4164401
[2025-06-06 13:55:44] 2025-06-06 11:54:07,861 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 13:55:44] 2025-06-06 11:54:07,861 | INFO     | collected zombie processes
[2025-06-06 13:55:44] 2025-06-06 11:54:07,861 | INFO     | will attempt to kill all subprocesses of pid=4164401
[2025-06-06 13:55:44] 2025-06-06 11:54:08,025 | INFO     | process IDs to be killed: [4164401] (in reverse order)
[2025-06-06 13:55:44] 2025-06-06 11:54:08,084 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 13:55:44] 2025-06-06 11:54:08,084 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 13:55:44] 2025-06-06 11:54:08,090 | INFO     | did not find any defunct processes belonging to 4164401
[2025-06-06 13:55:44] 2025-06-06 11:54:08,096 | INFO     | did not find any defunct processes belonging to 4164401
[2025-06-06 13:55:44] 2025-06-06 11:54:08,096 | INFO     | ready for new job
[2025-06-06 13:55:44] 2025-06-06 11:54:08,096 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 13:55:44] 2025-06-06 11:54:08,098 | INFO     | ***************************************
[2025-06-06 13:55:44] 2025-06-06 11:54:08,098 | INFO     | ***  PanDA Pilot version 3.10.3.82  ***
[2025-06-06 13:55:44] 2025-06-06 11:54:08,098 | INFO     | ***************************************
[2025-06-06 13:55:44] 2025-06-06 11:54:08,098 | INFO     | 
[2025-06-06 13:55:44] 2025-06-06 11:54:08,100 | INFO     | architecture information:
[2025-06-06 13:55:44] 2025-06-06 11:54:08,101 | INFO     | executing command: cat /etc/os-release
[2025-06-06 13:55:44] 2025-06-06 11:54:08,110 | INFO     | cat /etc/os-release:
[2025-06-06 13:55:44] NAME="CentOS Linux"
[2025-06-06 13:55:44] VERSION="7 (Core)"
[2025-06-06 13:55:44] ID="centos"
[2025-06-06 13:55:44] ID_LIKE="rhel fedora"
[2025-06-06 13:55:44] VERSION_ID="7"
[2025-06-06 13:55:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 13:55:44] ANSI_COLOR="0;31"
[2025-06-06 13:55:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 13:55:44] HOME_URL="https://www.centos.org/"
[2025-06-06 13:55:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 13:55:44] 
[2025-06-06 13:55:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 13:55:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 13:55:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 13:55:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 13:55:44] 
[2025-06-06 13:55:44] 2025-06-06 11:54:08,111 | INFO     | ***************************************
[2025-06-06 13:55:44] 2025-06-06 11:54:08,614 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2025-06-06 13:55:44] 2025-06-06 11:54:08,624 | INFO     | sufficient remaining disk space (677781700608 B)
[2025-06-06 13:55:44] 2025-06-06 11:54:08,624 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 13:55:44] 2025-06-06 11:54:08,624 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 13:55:44] 2025-06-06 11:54:08,624 | INFO     | update_server=False
[2025-06-06 13:55:44] 2025-06-06 11:54:08,624 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 13:55:44] 2025-06-06 11:54:08,625 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 13:55:44] 2025-06-06 11:54:08,625 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 13:55:44] 2025-06-06 11:54:08,625 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 13:55:44] 2025-06-06 11:54:08,626 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 13:55:44] 2025-06-06 11:54:08,626 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 13:55:44] 2025-06-06 11:54:08,626 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 13:55:44] 2025-06-06 11:54:08,635 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 13:55:44] 2025-06-06 11:54:08,635 | INFO     | aborting loop
[2025-06-06 13:55:44] 2025-06-06 11:54:09,062 | INFO     | all payload control threads have been joined
[2025-06-06 13:55:44] 2025-06-06 11:54:09,234 | INFO     | all data control threads have been joined
[2025-06-06 13:55:44] 2025-06-06 11:54:09,456 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 13:55:44] 2025-06-06 11:54:09,630 | INFO     | [job] retrieve thread has finished
[2025-06-06 13:55:44] 2025-06-06 11:54:09,631 | INFO     | [job] queue monitor thread has finished
[2025-06-06 13:55:44] 2025-06-06 11:54:09,641 | INFO     | [job] job monitor thread has finished
[2025-06-06 13:55:44] 2025-06-06 11:54:09,770 | INFO     | [payload] validate_post thread has finished
[2025-06-06 13:55:44] 2025-06-06 11:54:09,931 | INFO     | [payload] failed_post thread has finished
[2025-06-06 13:55:44] 2025-06-06 11:54:10,063 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 13:55:44] 2025-06-06 11:54:10,064 | INFO     | [job] validate thread has finished
[2025-06-06 13:55:44] 2025-06-06 11:54:10,065 | INFO     | all job control threads have been joined
[2025-06-06 13:55:44] 2025-06-06 11:54:10,067 | INFO     | [payload] control thread has finished
[2025-06-06 13:55:44] 2025-06-06 11:54:10,240 | INFO     | [data] control thread has finished
[2025-06-06 13:55:44] 2025-06-06 11:54:10,351 | INFO     | [data] copytool_in thread has finished
[2025-06-06 13:55:44] 2025-06-06 11:54:10,611 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 13:55:44] 2025-06-06 11:54:10,631 | INFO     | [data] copytool_out thread has finished
[2025-06-06 13:55:44] 2025-06-06 11:54:10,727 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 13:55:44] 2025-06-06 11:54:11,071 | INFO     | [job] control thread has finished
[2025-06-06 13:55:44] 2025-06-06 11:54:13,462 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 13:55:44] 2025-06-06 11:54:19,191 | INFO     | job.realtimelogging is not enabled
[2025-06-06 13:55:44] 2025-06-06 11:54:20,197 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 13:55:44] 2025-06-06 11:54:21,897 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23159854208832)>', '<ExcThread(monitor, started 23158864209664)>']
[2025-06-06 13:55:44] 2025-06-06 11:54:22,698 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 13:55:44] 2025-06-06 11:54:22,698 | INFO     | [monitor] control thread has ended
[2025-06-06 13:55:44] 2025-06-06 11:54:26,918 | INFO     | all workflow threads have been joined
[2025-06-06 13:55:44] 2025-06-06 11:54:26,918 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 13:55:44] 2025-06-06 11:54:26,918 | INFO     | traces error code: 0
[2025-06-06 13:55:44] 2025-06-06 11:54:26,918 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 13:55:44] 2025-06-06 11:54:27,023 [wrapper] ==== pilot stdout END ====
[2025-06-06 13:55:44] 2025-06-06 11:54:27,025 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 13:55:44] 2025-06-06 11:54:27,026 [wrapper] pilotpid: 4148274
[2025-06-06 13:55:44] 2025-06-06 11:54:27,028 [wrapper] Pilot exit status: 0
[2025-06-06 13:55:44] 2025-06-06 11:54:27,034 [wrapper] pandaids: 6681397137
[2025-06-06 13:55:44] 2025-06-06 11:54:27,073 [wrapper] cleanup supervisor_pilot  162694 4148275
[2025-06-06 13:55:44] 2025-06-06 11:54:27,075 [wrapper] Test setup, not cleaning
[2025-06-06 13:55:44] 2025-06-06 11:54:27,077 [wrapper] apfmon messages muted
[2025-06-06 13:55:44] 2025-06-06 11:54:27,079 [wrapper] ==== wrapper stdout END ====
[2025-06-06 13:55:44] 2025-06-06 11:54:27,080 [wrapper] ==== wrapper stderr END ====
[2025-06-06 13:55:44]  *** Error codes and diagnostics ***
[2025-06-06 13:55:44]     "exeErrorCode": 0,
[2025-06-06 13:55:44]     "exeErrorDiag": "",
[2025-06-06 13:55:44]     "pilotErrorCode": 0,
[2025-06-06 13:55:44]     "pilotErrorDiag": "",
[2025-06-06 13:55:44]  *** Listing of results directory ***
[2025-06-06 13:55:44] total 423596
[2025-06-06 13:55:44] -rw-r--r-- 1 boinc boinc    529402 Jun  6 02:05 pilot3.tar.gz
[2025-06-06 13:55:44] -rwx------ 1 boinc boinc     37140 Jun  6 02:14 runpilot2-wrapper.sh
[2025-06-06 13:55:44] -rw-r--r-- 1 boinc boinc      5112 Jun  6 02:14 queuedata.json
[2025-06-06 13:55:44] -rw-r--r-- 1 boinc boinc       100 Jun  6 11:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 13:55:44] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 11:23 run_atlas
[2025-06-06 13:55:44] -rw-r--r-- 1 boinc boinc       105 Jun  6 11:23 job.xml
[2025-06-06 13:55:44] -rw-r--r-- 2 boinc boinc 225022996 Jun  6 11:23 EVNT.44871834._003523.pool.root.1
[2025-06-06 13:55:44] -rw-r--r-- 2 boinc boinc     15095 Jun  6 11:23 start_atlas.sh
[2025-06-06 13:55:44] drwxrwx--x 2 boinc boinc      4096 Jun  6 11:23 shared
[2025-06-06 13:55:44] -rw-r--r-- 2 boinc boinc    541903 Jun  6 11:23 input.tar.gz
[2025-06-06 13:55:44] -rw-r--r-- 1 boinc boinc      6632 Jun  6 11:23 init_data.xml
[2025-06-06 13:55:44] -rw-r--r-- 1 boinc boinc         0 Jun  6 11:23 boinc_lockfile
[2025-06-06 13:55:44] -rw-r--r-- 1 boinc boinc      2557 Jun  6 11:23 pandaJob.out
[2025-06-06 13:55:44] -rw------- 1 boinc boinc    987967 Jun  6 11:23 agis_schedconf.cvmfs.json
[2025-06-06 13:55:44] -rw------- 1 boinc boinc   1598969 Jun  6 11:23 agis_ddmendpoints.agis.ALL.json
[2025-06-06 13:55:44] drwx------ 4 boinc boinc      4096 Jun  6 11:23 pilot3
[2025-06-06 13:55:44] -rw------- 1 boinc boinc 202576897 Jun  6 13:53 HITS.44871837._102327.pool.root.1
[2025-06-06 13:55:44] -rw------- 1 boinc boinc        95 Jun  6 13:53 pilot_heartbeat.json
[2025-06-06 13:55:44] -rw------- 1 boinc boinc      1031 Jun  6 13:53 memory_monitor_summary.json
[2025-06-06 13:55:44] -rw-r--r-- 1 boinc boinc       528 Jun  6 13:53 boinc_task_state.xml
[2025-06-06 13:55:44] -rw------- 1 boinc boinc    272811 Jun  6 13:54 log.44871837._102327.job.log.tgz.1
[2025-06-06 13:55:44] -rw------- 1 boinc boinc      7751 Jun  6 13:54 heartbeat.json
[2025-06-06 13:55:44] -rw------- 1 boinc boinc      4562 Jun  6 13:54 pilotlog.txt
[2025-06-06 13:55:44] -rw------- 1 boinc boinc    856948 Jun  6 13:54 log.44871837._102327.job.log.1
[2025-06-06 13:55:44] -rw------- 1 boinc boinc       357 Jun  6 13:54 output.list
[2025-06-06 13:55:44] -rw-r--r-- 1 boinc boinc       620 Jun  6 13:54 runtime_log
[2025-06-06 13:55:44] -rw------- 1 boinc boinc   1146880 Jun  6 13:54 result.tar.gz
[2025-06-06 13:55:44] -rw-r--r-- 1 boinc boinc      9026 Jun  6 13:54 runtime_log.err
[2025-06-06 13:55:44] -rw------- 1 boinc boinc       662 Jun  6 13:54 8CfNDmauZh7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmN6nKDmZybG7m.diag
[2025-06-06 13:55:44] -rw-r--r-- 1 boinc boinc        26 Jun  6 13:55 wrapper_checkpoint.txt
[2025-06-06 13:55:44] -rw-r--r-- 1 boinc boinc      8192 Jun  6 13:55 boinc_mmap_file
[2025-06-06 13:55:44] -rw-r--r-- 1 boinc boinc     20728 Jun  6 13:55 stderr.txt
[2025-06-06 13:55:44] HITS file was successfully produced:
[2025-06-06 13:55:44] -rw------- 1 boinc boinc 202576897 Jun  6 13:53 shared/HITS.pool.root.1
[2025-06-06 13:55:44]  *** Contents of shared directory: ***
[2025-06-06 13:55:44] total 419260
[2025-06-06 13:55:44] -rw-r--r-- 2 boinc boinc 225022996 Jun  6 11:23 ATLAS.root_0
[2025-06-06 13:55:44] -rw-r--r-- 2 boinc boinc     15095 Jun  6 11:23 start_atlas.sh
[2025-06-06 13:55:44] -rw-r--r-- 2 boinc boinc    541903 Jun  6 11:23 input.tar.gz
[2025-06-06 13:55:44] -rw------- 1 boinc boinc 202576897 Jun  6 13:53 HITS.pool.root.1
[2025-06-06 13:55:44] -rw------- 1 boinc boinc   1146880 Jun  6 13:54 result.tar.gz
13:55:46 (4141795): run_atlas exited; CPU time 35087.289185
13:55:46 (4141795): called boinc_finish(0)

</stderr_txt>
]]>

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