Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:13:47 (2961809): wrapper (7.7.26015): starting
21:13:47 (2961809): wrapper: running run_atlas (--nthreads 10)
[2025-06-05 21:13:47] Arguments: --nthreads 10
[2025-06-05 21:13:47] Threads: 10
[2025-06-05 21:13:47] Checking for CVMFS
[2025-06-05 21:13:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 21:13:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 21:13:48] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 21:13:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 21:13:48] 2.12.6.0 4158 1975 160812 146837 2 240 19443843 21042176 12739 16776704 0 5367663 98.845 16962178 30645 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 21:13:48] CVMFS is ok
[2025-06-05 21:13:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 21:13:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 21:13:48] Further information can be found at the LHC@home message board.
[2025-06-05 21:13:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 21:13:48] Checking for apptainer binary...
[2025-06-05 21:13:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 21:13:48] Running /usr/bin/apptainer --version
[2025-06-05 21:13:48] apptainer version 1.4.1-1.el9
[2025-06-05 21:13:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 21:13:48] c-16-10.aglt2.org
[2025-06-05 21:13:48] apptainer works
[2025-06-05 21:13:48] Set ATHENA_PROC_NUMBER=10
[2025-06-05 21:13:48] Set ATHENA_CORE_NUMBER=10
[2025-06-05 21:13:48] Starting ATLAS job with PandaID=6668788756
[2025-06-05 21:13:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 05:00:29]  *** The last 200 lines of the pilot log: ***
[2025-06-06 05:00:29] 2025-06-06 09:00:15,026 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-06 05:00:29] 2025-06-06 09:00:15,027 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668788756/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 05:00:29] 2025-06-06 09:00:15,028 | INFO     | extracted standard info from prmon json
[2025-06-06 05:00:29] 2025-06-06 09:00:15,028 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 05:00:29] 2025-06-06 09:00:15,028 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 05:00:29] 2025-06-06 09:00:15,029 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 05:00:29] 2025-06-06 09:00:15,029 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 05:00:29] 2025-06-06 09:00:15,066 | INFO     | fitting pss+swap vs Time
[2025-06-06 05:00:29] 2025-06-06 09:00:15,068 | INFO     | sum of square deviations: 29789454376.943142
[2025-06-06 05:00:29] 2025-06-06 09:00:15,074 | INFO     | sum of deviations: 27249539910.08299
[2025-06-06 05:00:29] 2025-06-06 09:00:15,075 | INFO     | mean x: 1749186409.951965
[2025-06-06 05:00:29] 2025-06-06 09:00:15,075 | INFO     | mean y: 2195145.68558952
[2025-06-06 05:00:29] 2025-06-06 09:00:15,075 | INFO     | -- intersect: -1597851779.8147619
[2025-06-06 05:00:29] 2025-06-06 09:00:15,075 | INFO     | intersect: -1597851779.8147619
[2025-06-06 05:00:29] 2025-06-06 09:00:15,076 | INFO     | chi2: 2.4742210016089032
[2025-06-06 05:00:29] 2025-06-06 09:00:15,077 | INFO     | sum of square deviations: 28824438798.322517
[2025-06-06 05:00:29] 2025-06-06 09:00:15,083 | INFO     | sum of deviations: 60428366636.30902
[2025-06-06 05:00:29] 2025-06-06 09:00:15,083 | INFO     | mean x: 1749186257.4547462
[2025-06-06 05:00:29] 2025-06-06 09:00:15,083 | INFO     | mean y: 2200355.600441501
[2025-06-06 05:00:29] 2025-06-06 09:00:15,084 | INFO     | -- intersect: -3664843059.198671
[2025-06-06 05:00:29] 2025-06-06 09:00:15,084 | INFO     | intersect: -3664843059.198671
[2025-06-06 05:00:29] 2025-06-06 09:00:15,084 | INFO     | chi2: 1.7937639490752149
[2025-06-06 05:00:29] 2025-06-06 09:00:15,085 | INFO     | current chi2=1.7937639490752149 (change=27.50187037015731 %)
[2025-06-06 05:00:29] 2025-06-06 09:00:15,085 | INFO     | sum of square deviations: 27880493626.19427
[2025-06-06 05:00:29] 2025-06-06 09:00:15,092 | INFO     | sum of deviations: 68572418801.33256
[2025-06-06 05:00:29] 2025-06-06 09:00:15,092 | INFO     | mean x: 1749186104.9575894
[2025-06-06 05:00:29] 2025-06-06 09:00:15,092 | INFO     | mean y: 2201671.1227678573
[2025-06-06 05:00:29] 2025-06-06 09:00:15,092 | INFO     | -- intersect: -4299943181.790881
[2025-06-06 05:00:29] 2025-06-06 09:00:15,092 | INFO     | intersect: -4299943181.790881
[2025-06-06 05:00:29] 2025-06-06 09:00:15,093 | INFO     | chi2: 1.7748876855937599
[2025-06-06 05:00:29] 2025-06-06 09:00:15,093 | INFO     | current chi2=1.7748876855937599 (change=1.0523270629441936 %)
[2025-06-06 05:00:29] 2025-06-06 09:00:15,093 | INFO     | right removable region: 447
[2025-06-06 05:00:29] 2025-06-06 09:00:15,094 | INFO     | sum of square deviations: 28824340588.410606
[2025-06-06 05:00:29] 2025-06-06 09:00:15,100 | INFO     | sum of deviations: -36461908298.74173
[2025-06-06 05:00:29] 2025-06-06 09:00:15,101 | INFO     | mean x: 1749186562.4569535
[2025-06-06 05:00:29] 2025-06-06 09:00:15,101 | INFO     | mean y: 2205171.6799116996
[2025-06-06 05:00:29] 2025-06-06 09:00:15,101 | INFO     | -- intersect: 2214872616.4762096
[2025-06-06 05:00:29] 2025-06-06 09:00:15,101 | INFO     | intersect: 2214872616.4762096
[2025-06-06 05:00:29] 2025-06-06 09:00:15,102 | INFO     | chi2: 1.1074342664452363
[2025-06-06 05:00:29] 2025-06-06 09:00:15,102 | INFO     | current chi2=1.1074342664452363 (change=55.241093430008526 %)
[2025-06-06 05:00:29] 2025-06-06 09:00:15,103 | INFO     | sum of square deviations: 27880324351.276794
[2025-06-06 05:00:29] 2025-06-06 09:00:15,109 | INFO     | sum of deviations: -63350828469.64284
[2025-06-06 05:00:29] 2025-06-06 09:00:15,109 | INFO     | mean x: 1749186714.9598215
[2025-06-06 05:00:29] 2025-06-06 09:00:15,109 | INFO     | mean y: 2209513.464285714
[2025-06-06 05:00:29] 2025-06-06 09:00:15,110 | INFO     | -- intersect: 3976784060.898594
[2025-06-06 05:00:29] 2025-06-06 09:00:15,110 | INFO     | intersect: 3976784060.898594
[2025-06-06 05:00:29] 2025-06-06 09:00:15,111 | INFO     | chi2: 0.8534759456668092
[2025-06-06 05:00:29] 2025-06-06 09:00:15,111 | INFO     | current chi2=0.8534759456668092 (change=22.932134978413696 %)
[2025-06-06 05:00:29] 2025-06-06 09:00:15,111 | INFO     | left removable region: 20
[2025-06-06 05:00:29] 2025-06-06 09:00:15,112 | INFO     | sum of square deviations: 24140562206.187183
[2025-06-06 05:00:29] 2025-06-06 09:00:15,117 | INFO     | sum of deviations: -17150063349.02342
[2025-06-06 05:00:29] 2025-06-06 09:00:15,117 | INFO     | mean x: 1749186684.4637003
[2025-06-06 05:00:29] 2025-06-06 09:00:15,117 | INFO     | mean y: 2216197.1920374706
[2025-06-06 05:00:29] 2025-06-06 09:00:15,118 | INFO     | -- intersect: 1244882469.4850705
[2025-06-06 05:00:29] 2025-06-06 09:00:15,118 | INFO     | intersect: 1244882469.4850705
[2025-06-06 05:00:29] 2025-06-06 09:00:15,119 | INFO     | chi2: 0.14938691418818129
[2025-06-06 05:00:29] 2025-06-06 09:00:15,119 | INFO     | -- intersect: 1244882469.4850705
[2025-06-06 05:00:29] 2025-06-06 09:00:15,119 | INFO     | current memory leak: -0.71 B/s (using 427 data points, chi2=0.15)
[2025-06-06 05:00:29] 2025-06-06 09:00:15,120 | INFO     | ..............................
[2025-06-06 05:00:29] 2025-06-06 09:00:15,120 | INFO     | . Timing measurements:
[2025-06-06 05:00:29] 2025-06-06 09:00:15,120 | INFO     | . get job = 0 s
[2025-06-06 05:00:29] 2025-06-06 09:00:15,120 | INFO     | . initial setup = 3 s
[2025-06-06 05:00:29] 2025-06-06 09:00:15,121 | INFO     | . payload setup = 7 s
[2025-06-06 05:00:29] 2025-06-06 09:00:15,121 | INFO     | . stage-in = 0 s
[2025-06-06 05:00:29] 2025-06-06 09:00:15,121 | INFO     | . payload execution = 27911 s
[2025-06-06 05:00:29] 2025-06-06 09:00:15,121 | INFO     | . stage-out = 15 s
[2025-06-06 05:00:29] 2025-06-06 09:00:15,121 | INFO     | . log creation = 0 s
[2025-06-06 05:00:29] 2025-06-06 09:00:15,121 | INFO     | ..............................
[2025-06-06 05:00:29] 2025-06-06 09:00:15,545 | INFO     | 
[2025-06-06 05:00:29] 2025-06-06 09:00:15,545 | INFO     | job summary report
[2025-06-06 05:00:29] 2025-06-06 09:00:15,545 | INFO     | --------------------------------------------------
[2025-06-06 05:00:29] 2025-06-06 09:00:15,545 | INFO     | PanDA job id: 6668788756
[2025-06-06 05:00:29] 2025-06-06 09:00:15,546 | INFO     | task id: 44871837
[2025-06-06 05:00:29] 2025-06-06 09:00:15,546 | INFO     | errors: (none)
[2025-06-06 05:00:29] 2025-06-06 09:00:15,546 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 05:00:29] 2025-06-06 09:00:15,546 | INFO     | pilot state: finished 
[2025-06-06 05:00:29] 2025-06-06 09:00:15,546 | INFO     | transexitcode: 0
[2025-06-06 05:00:29] 2025-06-06 09:00:15,547 | INFO     | exeerrorcode: 0
[2025-06-06 05:00:29] 2025-06-06 09:00:15,547 | INFO     | exeerrordiag: 
[2025-06-06 05:00:29] 2025-06-06 09:00:15,547 | INFO     | exitcode: 0
[2025-06-06 05:00:29] 2025-06-06 09:00:15,547 | INFO     | exitmsg: OK
[2025-06-06 05:00:29] 2025-06-06 09:00:15,547 | INFO     | cpuconsumptiontime: 103750 s
[2025-06-06 05:00:29] 2025-06-06 09:00:15,547 | INFO     | nevents: 400
[2025-06-06 05:00:29] 2025-06-06 09:00:15,548 | INFO     | neventsw: 0
[2025-06-06 05:00:29] 2025-06-06 09:00:15,548 | INFO     | pid: 2973988
[2025-06-06 05:00:29] 2025-06-06 09:00:15,548 | INFO     | pgrp: 2973988
[2025-06-06 05:00:29] 2025-06-06 09:00:15,548 | INFO     | corecount: 10
[2025-06-06 05:00:29] 2025-06-06 09:00:15,553 | INFO     | event service: False
[2025-06-06 05:00:29] 2025-06-06 09:00:15,554 | INFO     | sizes: {0: 2397392, 1: 2397392, 5: 2397626, 12: 2397682, 27923: 2433891, 27924: 2433890, 27939: 2443015, 27941: 2443071, 27958: 2443241}
[2025-06-06 05:00:29] 2025-06-06 09:00:15,554 | INFO     | --------------------------------------------------
[2025-06-06 05:00:29] 2025-06-06 09:00:15,554 | INFO     | 
[2025-06-06 05:00:29] 2025-06-06 09:00:15,555 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 05:00:29] 2025-06-06 09:00:15,655 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 05:00:29] 2025-06-06 09:00:15,655 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 05:00:29] 2025-06-06 09:00:15,655 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 05:00:29] 2025-06-06 09:00:15,656 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 05:00:29] 2025-06-06 09:00:15,656 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 05:00:29] 2025-06-06 09:00:15,656 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 05:00:29] 2025-06-06 09:00:15,656 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 05:00:29] 2025-06-06 09:00:15,656 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 05:00:29] 2025-06-06 09:00:15,656 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 05:00:29] 2025-06-06 09:00:15,657 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 05:00:29] 2025-06-06 09:00:15,657 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 05:00:29] 2025-06-06 09:00:15,657 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 05:00:29] 2025-06-06 09:00:15,657 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 05:00:29] 2025-06-06 09:00:15,657 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 05:00:29] 2025-06-06 09:00:15,657 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 05:00:29] 2025-06-06 09:00:15,658 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 05:00:29] 2025-06-06 09:00:15,658 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 05:00:29] 2025-06-06 09:00:15,658 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 05:00:29] 2025-06-06 09:00:15,658 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 05:00:29] 2025-06-06 09:00:15,658 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 05:00:29] 2025-06-06 09:00:15,658 | INFO     | job 6668788756 has completed (purged errors)
[2025-06-06 05:00:29] 2025-06-06 09:00:15,659 | INFO     | overall cleanup function is called
[2025-06-06 05:00:29] 2025-06-06 09:00:16,668 | INFO     | --- collectZombieJob: --- 10, [2973988]
[2025-06-06 05:00:29] 2025-06-06 09:00:16,670 | INFO     | zombie collector waiting for pid 2973988
[2025-06-06 05:00:29] 2025-06-06 09:00:16,670 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 05:00:29] 2025-06-06 09:00:16,670 | INFO     | collected zombie processes
[2025-06-06 05:00:29] 2025-06-06 09:00:16,671 | INFO     | will attempt to kill all subprocesses of pid=2973988
[2025-06-06 05:00:29] 2025-06-06 09:00:17,192 | INFO     | process IDs to be killed: [2973988] (in reverse order)
[2025-06-06 05:00:29] 2025-06-06 09:00:17,343 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 05:00:29] 2025-06-06 09:00:17,344 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 05:00:29] 2025-06-06 09:00:17,365 | INFO     | did not find any defunct processes belonging to 2973988
[2025-06-06 05:00:29] 2025-06-06 09:00:17,385 | INFO     | did not find any defunct processes belonging to 2973988
[2025-06-06 05:00:29] 2025-06-06 09:00:17,386 | INFO     | ready for new job
[2025-06-06 05:00:29] 2025-06-06 09:00:17,386 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 05:00:29] 2025-06-06 09:00:17,391 | INFO     | **************************************
[2025-06-06 05:00:29] 2025-06-06 09:00:17,391 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 05:00:29] 2025-06-06 09:00:17,392 | INFO     | **************************************
[2025-06-06 05:00:29] 2025-06-06 09:00:17,392 | INFO     | 
[2025-06-06 05:00:29] 2025-06-06 09:00:17,407 | INFO     | architecture information:
[2025-06-06 05:00:29] 2025-06-06 09:00:17,408 | INFO     | executing command: cat /etc/os-release
[2025-06-06 05:00:29] 2025-06-06 09:00:17,434 | INFO     | cat /etc/os-release:
[2025-06-06 05:00:29] NAME="CentOS Linux"
[2025-06-06 05:00:29] VERSION="7 (Core)"
[2025-06-06 05:00:29] ID="centos"
[2025-06-06 05:00:29] ID_LIKE="rhel fedora"
[2025-06-06 05:00:29] VERSION_ID="7"
[2025-06-06 05:00:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 05:00:29] ANSI_COLOR="0;31"
[2025-06-06 05:00:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 05:00:29] HOME_URL="https://www.centos.org/"
[2025-06-06 05:00:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 05:00:29] 
[2025-06-06 05:00:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 05:00:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 05:00:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 05:00:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 05:00:29] 
[2025-06-06 05:00:29] 2025-06-06 09:00:17,434 | INFO     | **************************************
[2025-06-06 05:00:29] 2025-06-06 09:00:17,938 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 05:00:29] 2025-06-06 09:00:17,991 | INFO     | sufficient remaining disk space (53839134720 B)
[2025-06-06 05:00:29] 2025-06-06 09:00:17,996 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 05:00:29] 2025-06-06 09:00:17,997 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 05:00:29] 2025-06-06 09:00:17,997 | INFO     | update_server=False
[2025-06-06 05:00:29] 2025-06-06 09:00:17,997 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 05:00:29] 2025-06-06 09:00:17,999 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 05:00:29] 2025-06-06 09:00:18,021 | INFO     | all data control threads have been joined
[2025-06-06 05:00:29] 2025-06-06 09:00:18,521 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 05:00:29] 2025-06-06 09:00:18,629 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 05:00:29] 2025-06-06 09:00:18,629 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 05:00:29] 2025-06-06 09:00:18,629 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 05:00:29] 2025-06-06 09:00:18,688 | INFO     | all payload control threads have been joined
[2025-06-06 05:00:29] 2025-06-06 09:00:18,989 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 05:00:29] 2025-06-06 09:00:18,989 | INFO     | aborting loop
[2025-06-06 05:00:29] 2025-06-06 09:00:19,004 | INFO     | [job] retrieve thread has finished
[2025-06-06 05:00:29] 2025-06-06 09:00:19,027 | INFO     | [data] control thread has finished
[2025-06-06 05:00:29] 2025-06-06 09:00:19,073 | INFO     | [payload] failed_post thread has finished
[2025-06-06 05:00:29] 2025-06-06 09:00:19,143 | INFO     | all job control threads have been joined
[2025-06-06 05:00:29] 2025-06-06 09:00:19,629 | INFO     | [payload] validate_post thread has finished
[2025-06-06 05:00:29] 2025-06-06 09:00:19,693 | INFO     | [payload] control thread has finished
[2025-06-06 05:00:29] 2025-06-06 09:00:19,806 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 05:00:29] 2025-06-06 09:00:19,827 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 05:00:29] 2025-06-06 09:00:19,872 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 05:00:29] 2025-06-06 09:00:19,995 | INFO     | [job] job monitor thread has finished
[2025-06-06 05:00:29] 2025-06-06 09:00:20,005 | INFO     | [data] copytool_out thread has finished
[2025-06-06 05:00:29] 2025-06-06 09:00:20,150 | INFO     | [job] control thread has finished
[2025-06-06 05:00:29] 2025-06-06 09:00:20,173 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 05:00:29] 2025-06-06 09:00:20,258 | INFO     | [data] copytool_in thread has finished
[2025-06-06 05:00:29] 2025-06-06 09:00:20,387 | INFO     | [job] validate thread has finished
[2025-06-06 05:00:29] 2025-06-06 09:00:20,401 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 05:00:29] 2025-06-06 09:00:21,407 | INFO     | [job] queue monitor thread has finished
[2025-06-06 05:00:29] 2025-06-06 09:00:22,530 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 05:00:29] 2025-06-06 09:00:23,371 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139808392959808)>', '<ExcThread(monitor, started 139807762151168)>']
[2025-06-06 05:00:29] 2025-06-06 09:00:23,659 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 05:00:29] 2025-06-06 09:00:23,660 | INFO     | [monitor] control thread has ended
[2025-06-06 05:00:29] 2025-06-06 09:00:28,396 | INFO     | all workflow threads have been joined
[2025-06-06 05:00:29] 2025-06-06 09:00:28,397 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 05:00:29] 2025-06-06 09:00:28,398 | INFO     | traces error code: 0
[2025-06-06 05:00:29] 2025-06-06 09:00:28,398 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 05:00:29] 2025-06-06 09:00:28,640 [wrapper] ==== pilot stdout END ====
[2025-06-06 05:00:29] 2025-06-06 09:00:28,667 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 05:00:29] 2025-06-06 09:00:28,670 [wrapper] pilotpid: 2967072
[2025-06-06 05:00:29] 2025-06-06 09:00:28,673 [wrapper] Pilot exit status: 0
[2025-06-06 05:00:29] 2025-06-06 09:00:28,691 [wrapper] pandaids: 6668788756
[2025-06-06 05:00:29] 2025-06-06 09:00:28,768 [wrapper] cleanup supervisor_pilot  632152 2967074
[2025-06-06 05:00:29] 2025-06-06 09:00:28,779 [wrapper] Test setup, not cleaning
[2025-06-06 05:00:29] 2025-06-06 09:00:28,806 [wrapper] apfmon messages muted
[2025-06-06 05:00:29] 2025-06-06 09:00:28,832 [wrapper] ==== wrapper stdout END ====
[2025-06-06 05:00:29] 2025-06-06 09:00:28,836 [wrapper] ==== wrapper stderr END ====
[2025-06-06 05:00:29]  *** Error codes and diagnostics ***
[2025-06-06 05:00:29]     "exeErrorCode": 0,
[2025-06-06 05:00:29]     "exeErrorDiag": "",
[2025-06-06 05:00:29]     "pilotErrorCode": 0,
[2025-06-06 05:00:29]     "pilotErrorDiag": "",
[2025-06-06 05:00:29]  *** Listing of results directory ***
[2025-06-06 05:00:29] total 421528
[2025-06-06 05:00:29] -rw-r--r--. 1 boincer umatlas    495897 May 28 14:37 pilot3.tar.gz
[2025-06-06 05:00:29] -rwx------. 1 boincer umatlas     37140 May 28 14:41 runpilot2-wrapper.sh
[2025-06-06 05:00:29] -rw-r--r--. 1 boincer umatlas      5111 May 28 14:41 queuedata.json
[2025-06-06 05:00:29] -rw-r--r--. 1 boincer umatlas       100 Jun  5 21:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 05:00:29] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 21:13 run_atlas
[2025-06-06 05:00:29] -rw-r--r--. 1 boincer umatlas       105 Jun  5 21:13 job.xml
[2025-06-06 05:00:29] -rw-r--r--. 2 boincer umatlas 224265634 Jun  5 21:13 EVNT.44871834._003460.pool.root.1
[2025-06-06 05:00:29] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 21:13 start_atlas.sh
[2025-06-06 05:00:29] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 21:13 shared
[2025-06-06 05:00:29] -rw-r--r--. 2 boincer umatlas    508875 Jun  5 21:13 input.tar.gz
[2025-06-06 05:00:29] -rw-r--r--. 1 boincer umatlas         0 Jun  5 21:13 boinc_lockfile
[2025-06-06 05:00:29] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 21:13 pandaJob.out
[2025-06-06 05:00:29] -rw-------. 1 boincer umatlas    987721 Jun  5 21:13 agis_schedconf.cvmfs.json
[2025-06-06 05:00:29] drwx------. 4 boincer umatlas      4096 Jun  5 21:14 pilot3
[2025-06-06 05:00:29] -rw-r--r--. 1 boincer umatlas      6520 Jun  6 04:57 init_data.xml
[2025-06-06 05:00:29] -rw-------. 1 boincer umatlas 197907429 Jun  6 04:58 HITS.44871837._088882.pool.root.1
[2025-06-06 05:00:29] -rw-r--r--. 1 boincer umatlas       532 Jun  6 04:59 boinc_task_state.xml
[2025-06-06 05:00:29] -rw-------. 1 boincer umatlas        95 Jun  6 04:59 pilot_heartbeat.json
[2025-06-06 05:00:29] -rw-------. 1 boincer umatlas      1039 Jun  6 04:59 memory_monitor_summary.json
[2025-06-06 05:00:29] -rw-------. 1 boincer umatlas   1598969 Jun  6 04:59 agis_ddmendpoints.agis.ALL.json
[2025-06-06 05:00:29] -rw-------. 1 boincer umatlas    558823 Jun  6 04:59 log.44871837._088882.job.log.tgz.1
[2025-06-06 05:00:29] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 05:00 boinc_mmap_file
[2025-06-06 05:00:29] -rw-r--r--. 1 boincer umatlas        29 Jun  6 05:00 wrapper_checkpoint.txt
[2025-06-06 05:00:29] -rw-------. 1 boincer umatlas      7720 Jun  6 05:00 heartbeat.json
[2025-06-06 05:00:29] -rw-------. 1 boincer umatlas      4353 Jun  6 05:00 pilotlog.txt
[2025-06-06 05:00:29] -rw-------. 1 boincer umatlas   2258420 Jun  6 05:00 log.44871837._088882.job.log.1
[2025-06-06 05:00:29] -rw-------. 1 boincer umatlas       357 Jun  6 05:00 output.list
[2025-06-06 05:00:29] -rw-r--r--. 1 boincer umatlas       620 Jun  6 05:00 runtime_log
[2025-06-06 05:00:29] -rw-------. 1 boincer umatlas   2836480 Jun  6 05:00 result.tar.gz
[2025-06-06 05:00:29] -rw-------. 1 boincer umatlas       659 Jun  6 05:00 ViKODm2tae7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmmpcKDmabsGUn.diag
[2025-06-06 05:00:29] -rw-r--r--. 1 boincer umatlas      8657 Jun  6 05:00 runtime_log.err
[2025-06-06 05:00:29] -rw-r--r--. 1 boincer umatlas     20924 Jun  6 05:00 stderr.txt
[2025-06-06 05:00:29] HITS file was successfully produced:
[2025-06-06 05:00:29] -rw-------. 1 boincer umatlas 197907429 Jun  6 04:58 shared/HITS.pool.root.1
[2025-06-06 05:00:29]  *** Contents of shared directory: ***
[2025-06-06 05:00:29] total 415576
[2025-06-06 05:00:29] -rw-r--r--. 2 boincer umatlas 224265634 Jun  5 21:13 ATLAS.root_0
[2025-06-06 05:00:29] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 21:13 start_atlas.sh
[2025-06-06 05:00:29] -rw-r--r--. 2 boincer umatlas    508875 Jun  5 21:13 input.tar.gz
[2025-06-06 05:00:29] -rw-------. 1 boincer umatlas 197907429 Jun  6 04:58 HITS.pool.root.1
[2025-06-06 05:00:29] -rw-------. 1 boincer umatlas   2836480 Jun  6 05:00 result.tar.gz
05:00:30 (2961809): run_atlas exited; CPU time 104759.615750
05:00:30 (2961809): called boinc_finish(0)

</stderr_txt>
]]>

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