Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:57:35 (20338): wrapper (7.7.26015): starting
07:57:35 (20338): wrapper: running run_atlas (--nthreads 8)
[2025-06-06 07:57:35] Arguments: --nthreads 8
[2025-06-06 07:57:35] Threads: 8
[2025-06-06 07:57:35] Checking for CVMFS
[2025-06-06 07:57:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 07:57:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 07:57:36] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 07:57:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 07:57:37] 2.11.2.0 29550 35691 94704 146844 1 59 18105299 25165825 3908 130560 0 18912648 99.816 20977124 2144 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-06 07:57:37] CVMFS is ok
[2025-06-06 07:57:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 07:57:37] Checking for apptainer binary...
[2025-06-06 07:57:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 07:57:37] Running /usr/bin/apptainer --version
[2025-06-06 07:57:37] apptainer version 1.3.2-1.el7
[2025-06-06 07:57:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 07:57:49] cg-vwn256.simple-grid.lan
[2025-06-06 07:57:49] apptainer works
[2025-06-06 07:57:49] Set ATHENA_PROC_NUMBER=8
[2025-06-06 07:57:49] Set ATHENA_CORE_NUMBER=8
[2025-06-06 07:57:50] Starting ATLAS job with PandaID=6668787930
[2025-06-06 07:57:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 13:25:44]  *** The last 200 lines of the pilot log: ***
[2025-06-06 13:25:44] 2025-06-06 11:25:30,634 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 13:25:44] 2025-06-06 11:25:30,634 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 13:25:44] 2025-06-06 11:25:30,645 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 13:25:44] 2025-06-06 11:25:30,645 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 13:25:44] 2025-06-06 11:25:30,657 | INFO     | fitting pss+swap vs Time
[2025-06-06 13:25:44] 2025-06-06 11:25:30,658 | INFO     | sum of square deviations: 9417545878.0
[2025-06-06 13:25:44] 2025-06-06 11:25:30,666 | INFO     | sum of deviations: 128369972549.5
[2025-06-06 13:25:44] 2025-06-06 11:25:30,667 | INFO     | mean x: 1749199616.5
[2025-06-06 13:25:44] 2025-06-06 11:25:30,667 | INFO     | mean y: 2451649.2403846155
[2025-06-06 13:25:44] 2025-06-06 11:25:30,667 | INFO     | -- intersect: -23840777750.70891
[2025-06-06 13:25:44] 2025-06-06 11:25:30,667 | INFO     | intersect: -23840777750.70891
[2025-06-06 13:25:44] 2025-06-06 11:25:30,668 | INFO     | chi2: 5.003425128879944
[2025-06-06 13:25:44] 2025-06-06 11:25:30,669 | INFO     | sum of square deviations: 8971993338.0
[2025-06-06 13:25:44] 2025-06-06 11:25:30,672 | INFO     | sum of deviations: 146868012679.0
[2025-06-06 13:25:44] 2025-06-06 11:25:30,672 | INFO     | mean x: 1749199464.0
[2025-06-06 13:25:44] 2025-06-06 11:25:30,672 | INFO     | mean y: 2457888.576547231
[2025-06-06 13:25:44] 2025-06-06 11:25:30,673 | INFO     | -- intersect: -28631251408.63961
[2025-06-06 13:25:44] 2025-06-06 11:25:30,673 | INFO     | intersect: -28631251408.63961
[2025-06-06 13:25:44] 2025-06-06 11:25:30,673 | INFO     | chi2: 4.251239170468629
[2025-06-06 13:25:44] 2025-06-06 11:25:30,673 | INFO     | current chi2=4.251239170468629 (change=15.033420887417122 %)
[2025-06-06 13:25:44] 2025-06-06 11:25:30,674 | INFO     | right removable region: 306
[2025-06-06 13:25:44] 2025-06-06 11:25:30,674 | INFO     | sum of square deviations: 8971993338.0
[2025-06-06 13:25:44] 2025-06-06 11:25:30,677 | INFO     | sum of deviations: 29321165972.00001
[2025-06-06 13:25:44] 2025-06-06 11:25:30,678 | INFO     | mean x: 1749199769.0
[2025-06-06 13:25:44] 2025-06-06 11:25:30,678 | INFO     | mean y: 2485502.4788273615
[2025-06-06 13:25:44] 2025-06-06 11:25:30,678 | INFO     | -- intersect: -5714034206.447541
[2025-06-06 13:25:44] 2025-06-06 11:25:30,678 | INFO     | intersect: -5714034206.447541
[2025-06-06 13:25:44] 2025-06-06 11:25:30,679 | INFO     | chi2: 1.1510319856356463
[2025-06-06 13:25:44] 2025-06-06 11:25:30,679 | INFO     | current chi2=1.1510319856356463 (change=76.99511922359245 %)
[2025-06-06 13:25:44] 2025-06-06 11:25:30,679 | INFO     | sum of square deviations: 8540720135.5
[2025-06-06 13:25:44] 2025-06-06 11:25:30,682 | INFO     | sum of deviations: 1123759872.9999886
[2025-06-06 13:25:44] 2025-06-06 11:25:30,683 | INFO     | mean x: 1749199921.5
[2025-06-06 13:25:44] 2025-06-06 11:25:30,683 | INFO     | mean y: 2495433.6291390727
[2025-06-06 13:25:44] 2025-06-06 11:25:30,683 | INFO     | -- intersect: -227658540.5616278
[2025-06-06 13:25:44] 2025-06-06 11:25:30,683 | INFO     | intersect: -227658540.5616278
[2025-06-06 13:25:44] 2025-06-06 11:25:30,684 | INFO     | chi2: 0.7972291396079622
[2025-06-06 13:25:44] 2025-06-06 11:25:30,684 | INFO     | current chi2=0.7972291396079622 (change=30.737881348475298 %)
[2025-06-06 13:25:44] 2025-06-06 11:25:30,684 | INFO     | sum of square deviations: 8123493708.0
[2025-06-06 13:25:44] 2025-06-06 11:25:30,687 | INFO     | sum of deviations: -3003340978.0000057
[2025-06-06 13:25:44] 2025-06-06 11:25:30,687 | INFO     | mean x: 1749200074.0
[2025-06-06 13:25:44] 2025-06-06 11:25:30,688 | INFO     | mean y: 2496938.569023569
[2025-06-06 13:25:44] 2025-06-06 11:25:30,688 | INFO     | -- intersect: 649194584.9020615
[2025-06-06 13:25:44] 2025-06-06 11:25:30,688 | INFO     | intersect: 649194584.9020615
[2025-06-06 13:25:44] 2025-06-06 11:25:30,688 | INFO     | chi2: 0.7919654499046459
[2025-06-06 13:25:44] 2025-06-06 11:25:30,688 | INFO     | current chi2=0.7919654499046459 (change=0.6602480318148778 %)
[2025-06-06 13:25:44] 2025-06-06 11:25:30,689 | INFO     | left removable region: 30
[2025-06-06 13:25:44] 2025-06-06 11:25:30,689 | INFO     | sum of square deviations: 6519285025.0
[2025-06-06 13:25:44] 2025-06-06 11:25:30,692 | INFO     | sum of deviations: 10345526952.499994
[2025-06-06 13:25:44] 2025-06-06 11:25:30,692 | INFO     | mean x: 1749200348.5
[2025-06-06 13:25:44] 2025-06-06 11:25:30,692 | INFO     | mean y: 2506780.4963768115
[2025-06-06 13:25:44] 2025-06-06 11:25:30,692 | INFO     | -- intersect: -2773318985.877311
[2025-06-06 13:25:44] 2025-06-06 11:25:30,692 | INFO     | intersect: -2773318985.877311
[2025-06-06 13:25:44] 2025-06-06 11:25:30,693 | INFO     | chi2: 0.00163286825252831
[2025-06-06 13:25:44] 2025-06-06 11:25:30,693 | INFO     | -- intersect: -2773318985.877311
[2025-06-06 13:25:44] 2025-06-06 11:25:30,693 | INFO     | current memory leak: 1.59 B/s (using 276 data points, chi2=0.00)
[2025-06-06 13:25:44] 2025-06-06 11:25:30,694 | INFO     | ..............................
[2025-06-06 13:25:44] 2025-06-06 11:25:30,694 | INFO     | . Timing measurements:
[2025-06-06 13:25:44] 2025-06-06 11:25:30,694 | INFO     | . get job = 0 s
[2025-06-06 13:25:44] 2025-06-06 11:25:30,695 | INFO     | . initial setup = 5 s
[2025-06-06 13:25:44] 2025-06-06 11:25:30,695 | INFO     | . payload setup = 149 s
[2025-06-06 13:25:44] 2025-06-06 11:25:30,695 | INFO     | . stage-in = 0 s
[2025-06-06 13:25:44] 2025-06-06 11:25:30,695 | INFO     | . payload execution = 19130 s
[2025-06-06 13:25:44] 2025-06-06 11:25:30,695 | INFO     | . stage-out = 5 s
[2025-06-06 13:25:44] 2025-06-06 11:25:30,695 | INFO     | . log creation = 0 s
[2025-06-06 13:25:44] 2025-06-06 11:25:30,695 | INFO     | ..............................
[2025-06-06 13:25:44] 2025-06-06 11:25:31,280 | INFO     | 
[2025-06-06 13:25:44] 2025-06-06 11:25:31,281 | INFO     | job summary report
[2025-06-06 13:25:44] 2025-06-06 11:25:31,281 | INFO     | --------------------------------------------------
[2025-06-06 13:25:44] 2025-06-06 11:25:31,281 | INFO     | PanDA job id: 6668787930
[2025-06-06 13:25:44] 2025-06-06 11:25:31,281 | INFO     | task id: 44871837
[2025-06-06 13:25:44] 2025-06-06 11:25:31,281 | INFO     | errors: (none)
[2025-06-06 13:25:44] 2025-06-06 11:25:31,281 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 13:25:44] 2025-06-06 11:25:31,281 | INFO     | pilot state: finished 
[2025-06-06 13:25:44] 2025-06-06 11:25:31,281 | INFO     | transexitcode: 0
[2025-06-06 13:25:44] 2025-06-06 11:25:31,281 | INFO     | exeerrorcode: 0
[2025-06-06 13:25:44] 2025-06-06 11:25:31,281 | INFO     | exeerrordiag: 
[2025-06-06 13:25:44] 2025-06-06 11:25:31,282 | INFO     | exitcode: 0
[2025-06-06 13:25:44] 2025-06-06 11:25:31,282 | INFO     | exitmsg: OK
[2025-06-06 13:25:44] 2025-06-06 11:25:31,282 | INFO     | cpuconsumptiontime: 70837 s
[2025-06-06 13:25:44] 2025-06-06 11:25:31,282 | INFO     | nevents: 400
[2025-06-06 13:25:44] 2025-06-06 11:25:31,282 | INFO     | neventsw: 0
[2025-06-06 13:25:44] 2025-06-06 11:25:31,282 | INFO     | pid: 5410
[2025-06-06 13:25:44] 2025-06-06 11:25:31,282 | INFO     | pgrp: 5410
[2025-06-06 13:25:44] 2025-06-06 11:25:31,283 | INFO     | corecount: 8
[2025-06-06 13:25:44] 2025-06-06 11:25:31,283 | INFO     | event service: False
[2025-06-06 13:25:44] 2025-06-06 11:25:31,283 | INFO     | sizes: {0: 2397393, 1: 2397393, 11: 2397421, 22: 2397449, 33: 2397477, 44: 2397533, 54: 2397689, 65: 2397717, 76: 2397745, 84: 2398007, 87: 2398035, 19283: 2430210
[2025-06-06 13:25:44] 2025-06-06 11:25:31,283 | INFO     | --------------------------------------------------
[2025-06-06 13:25:44] 2025-06-06 11:25:31,283 | INFO     | 
[2025-06-06 13:25:44] 2025-06-06 11:25:31,283 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-06-06 13:25:44] 2025-06-06 11:25:31,325 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 13:25:44] 2025-06-06 11:25:31,326 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 13:25:44] 2025-06-06 11:25:31,326 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 13:25:44] 2025-06-06 11:25:31,326 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 13:25:44] 2025-06-06 11:25:31,326 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 13:25:44] 2025-06-06 11:25:31,326 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 13:25:44] 2025-06-06 11:25:31,326 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 13:25:44] 2025-06-06 11:25:31,326 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 13:25:44] 2025-06-06 11:25:31,326 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 13:25:44] 2025-06-06 11:25:31,326 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 13:25:44] 2025-06-06 11:25:31,326 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 13:25:44] 2025-06-06 11:25:31,327 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 13:25:44] 2025-06-06 11:25:31,327 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 13:25:44] 2025-06-06 11:25:31,327 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 13:25:44] 2025-06-06 11:25:31,327 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 13:25:44] 2025-06-06 11:25:31,327 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 13:25:44] 2025-06-06 11:25:31,327 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 13:25:44] 2025-06-06 11:25:31,327 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 13:25:44] 2025-06-06 11:25:31,327 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 13:25:44] 2025-06-06 11:25:31,327 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 13:25:44] 2025-06-06 11:25:31,327 | INFO     | job 6668787930 has completed (purged errors)
[2025-06-06 13:25:44] 2025-06-06 11:25:31,328 | INFO     | overall cleanup function is called
[2025-06-06 13:25:44] 2025-06-06 11:25:32,339 | INFO     | --- collectZombieJob: --- 10, [5410]
[2025-06-06 13:25:44] 2025-06-06 11:25:32,340 | INFO     | zombie collector waiting for pid 5410
[2025-06-06 13:25:44] 2025-06-06 11:25:32,340 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 13:25:44] 2025-06-06 11:25:32,340 | INFO     | collected zombie processes
[2025-06-06 13:25:44] 2025-06-06 11:25:32,340 | INFO     | will attempt to kill all subprocesses of pid=5410
[2025-06-06 13:25:44] 2025-06-06 11:25:32,439 | INFO     | process IDs to be killed: [5410] (in reverse order)
[2025-06-06 13:25:44] 2025-06-06 11:25:32,508 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 13:25:44] 2025-06-06 11:25:32,508 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 13:25:44] 2025-06-06 11:25:32,513 | INFO     | did not find any defunct processes belonging to 5410
[2025-06-06 13:25:44] 2025-06-06 11:25:32,518 | INFO     | did not find any defunct processes belonging to 5410
[2025-06-06 13:25:44] 2025-06-06 11:25:32,518 | INFO     | ready for new job
[2025-06-06 13:25:44] 2025-06-06 11:25:32,519 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 13:25:44] 2025-06-06 11:25:32,522 | INFO     | **************************************
[2025-06-06 13:25:44] 2025-06-06 11:25:32,522 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 13:25:44] 2025-06-06 11:25:32,522 | INFO     | **************************************
[2025-06-06 13:25:44] 2025-06-06 11:25:32,522 | INFO     | 
[2025-06-06 13:25:44] 2025-06-06 11:25:32,523 | INFO     | pilot is running in a VM
[2025-06-06 13:25:44] 2025-06-06 11:25:32,523 | INFO     | architecture information:
[2025-06-06 13:25:44] 2025-06-06 11:25:32,524 | INFO     | executing command: cat /etc/os-release
[2025-06-06 13:25:44] 2025-06-06 11:25:32,555 | INFO     | cat /etc/os-release:
[2025-06-06 13:25:44] NAME="CentOS Linux"
[2025-06-06 13:25:44] VERSION="7 (Core)"
[2025-06-06 13:25:44] ID="centos"
[2025-06-06 13:25:44] ID_LIKE="rhel fedora"
[2025-06-06 13:25:44] VERSION_ID="7"
[2025-06-06 13:25:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 13:25:44] ANSI_COLOR="0;31"
[2025-06-06 13:25:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 13:25:44] HOME_URL="https://www.centos.org/"
[2025-06-06 13:25:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 13:25:44] 
[2025-06-06 13:25:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 13:25:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 13:25:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 13:25:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 13:25:44] 
[2025-06-06 13:25:44] 2025-06-06 11:25:32,555 | INFO     | **************************************
[2025-06-06 13:25:44] 2025-06-06 11:25:33,059 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-06-06 13:25:44] 2025-06-06 11:25:33,089 | INFO     | sufficient remaining disk space (470863052800 B)
[2025-06-06 13:25:44] 2025-06-06 11:25:33,089 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 13:25:44] 2025-06-06 11:25:33,090 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 13:25:44] 2025-06-06 11:25:33,090 | INFO     | update_server=False
[2025-06-06 13:25:44] 2025-06-06 11:25:33,090 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 13:25:44] 2025-06-06 11:25:33,091 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 13:25:44] 2025-06-06 11:25:33,091 | INFO     | aborting loop
[2025-06-06 13:25:44] 2025-06-06 11:25:33,170 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 13:25:44] 2025-06-06 11:25:33,556 | INFO     | PID=27136 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-06 13:25:44] 2025-06-06 11:25:33,556 | INFO     | .. there are 9 such processes running
[2025-06-06 13:25:44] 2025-06-06 11:25:33,556 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 13:25:44] 2025-06-06 11:25:33,556 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 13:25:44] 2025-06-06 11:25:33,557 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 13:25:44] 2025-06-06 11:25:33,958 | INFO     | all data control threads have been joined
[2025-06-06 13:25:44] 2025-06-06 11:25:34,027 | INFO     | all job control threads have been joined
[2025-06-06 13:25:44] 2025-06-06 11:25:34,068 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 13:25:44] 2025-06-06 11:25:34,095 | INFO     | [job] job monitor thread has finished
[2025-06-06 13:25:44] 2025-06-06 11:25:34,096 | INFO     | [job] retrieve thread has finished
[2025-06-06 13:25:44] 2025-06-06 11:25:34,216 | INFO     | [job] validate thread has finished
[2025-06-06 13:25:44] 2025-06-06 11:25:34,227 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 13:25:44] 2025-06-06 11:25:34,325 | INFO     | [data] copytool_in thread has finished
[2025-06-06 13:25:44] 2025-06-06 11:25:34,586 | INFO     | all payload control threads have been joined
[2025-06-06 13:25:44] 2025-06-06 11:25:34,758 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 13:25:44] 2025-06-06 11:25:34,964 | INFO     | [data] control thread has finished
[2025-06-06 13:25:44] 2025-06-06 11:25:35,032 | INFO     | [job] control thread has finished
[2025-06-06 13:25:44] 2025-06-06 11:25:35,206 | INFO     | [payload] validate_post thread has finished
[2025-06-06 13:25:44] 2025-06-06 11:25:35,223 | INFO     | [payload] failed_post thread has finished
[2025-06-06 13:25:44] 2025-06-06 11:25:35,431 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 13:25:44] 2025-06-06 11:25:35,443 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 13:25:44] 2025-06-06 11:25:35,591 | INFO     | [payload] control thread has finished
[2025-06-06 13:25:44] 2025-06-06 11:25:35,852 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 13:25:44] 2025-06-06 11:25:36,074 | INFO     | [data] copytool_out thread has finished
[2025-06-06 13:25:44] 2025-06-06 11:25:36,858 | INFO     | [job] queue monitor thread has finished
[2025-06-06 13:25:44] 2025-06-06 11:25:37,179 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 13:25:44] 2025-06-06 11:25:38,856 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140063041378112)>', '<ExcThread(monitor, started 140062163461888)>']
[2025-06-06 13:25:44] 2025-06-06 11:25:39,589 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 13:25:44] 2025-06-06 11:25:39,590 | INFO     | [monitor] control thread has ended
[2025-06-06 13:25:44] 2025-06-06 11:25:43,883 | INFO     | all workflow threads have been joined
[2025-06-06 13:25:44] 2025-06-06 11:25:43,884 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 13:25:44] 2025-06-06 11:25:43,884 | INFO     | traces error code: 0
[2025-06-06 13:25:44] 2025-06-06 11:25:43,885 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 13:25:44] 2025-06-06 11:25:44,152 [wrapper] ==== pilot stdout END ====
[2025-06-06 13:25:44] 2025-06-06 11:25:44,160 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 13:25:44] 2025-06-06 11:25:44,169 [wrapper] pilotpid: 27136
[2025-06-06 13:25:44] 2025-06-06 11:25:44,177 [wrapper] Pilot exit status: 0
[2025-06-06 13:25:44] 2025-06-06 11:25:44,326 [wrapper] pandaids: 6668787930
[2025-06-06 13:25:44] 2025-06-06 11:25:44,403 [wrapper] cleanup supervisor_pilot 14098 27137
[2025-06-06 13:25:44] 2025-06-06 11:25:44,430 [wrapper] Test setup, not cleaning
[2025-06-06 13:25:44] 2025-06-06 11:25:44,450 [wrapper] apfmon messages muted
[2025-06-06 13:25:44] 2025-06-06 11:25:44,515 [wrapper] ==== wrapper stdout END ====
[2025-06-06 13:25:44] 2025-06-06 11:25:44,593 [wrapper] ==== wrapper stderr END ====
[2025-06-06 13:25:44]  *** Error codes and diagnostics ***
[2025-06-06 13:25:44]     "exeErrorCode": 0,
[2025-06-06 13:25:44]     "exeErrorDiag": "",
[2025-06-06 13:25:44]     "pilotErrorCode": 0,
[2025-06-06 13:25:44]     "pilotErrorDiag": "",
[2025-06-06 13:25:44]  *** Listing of results directory ***
[2025-06-06 13:25:45] total 419928
[2025-06-06 13:25:45] -rw-r--r--. 1 boinc boinc    495897 May 28 20:10 pilot3.tar.gz
[2025-06-06 13:25:45] -rw-r--r--. 1 boinc boinc      5111 May 28 20:35 queuedata.json
[2025-06-06 13:25:45] -rwx------. 1 boinc boinc     37140 May 28 20:36 runpilot2-wrapper.sh
[2025-06-06 13:25:45] -rw-r--r--. 1 boinc boinc       100 Jun  6 07:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 13:25:45] -rwxr-xr-x. 1 boinc boinc      7986 Jun  6 07:57 run_atlas
[2025-06-06 13:25:45] -rw-r--r--. 1 boinc boinc       105 Jun  6 07:57 job.xml
[2025-06-06 13:25:45] -rw-r--r--. 1 boinc boinc      6390 Jun  6 07:57 init_data.xml
[2025-06-06 13:25:45] -rw-r--r--. 2 boinc boinc 223843191 Jun  6 07:57 EVNT.44871834._003448.pool.root.1
[2025-06-06 13:25:45] -rw-r--r--. 2 boinc boinc     15093 Jun  6 07:57 start_atlas.sh
[2025-06-06 13:25:45] drwxrwx--x. 2 boinc boinc        68 Jun  6 07:57 shared
[2025-06-06 13:25:45] -rw-r--r--. 2 boinc boinc    508878 Jun  6 07:57 input.tar.gz
[2025-06-06 13:25:45] -rw-r--r--. 1 boinc boinc         0 Jun  6 07:57 boinc_lockfile
[2025-06-06 13:25:45] -rw-r--r--. 1 boinc boinc      2559 Jun  6 07:57 pandaJob.out
[2025-06-06 13:25:45] -rw-------. 1 boinc boinc    988109 Jun  6 08:00 agis_schedconf.cvmfs.json
[2025-06-06 13:25:45] drwx------. 4 boinc boinc      4096 Jun  6 08:00 pilot3
[2025-06-06 13:25:45] -rw-------. 1 boinc boinc 198175503 Jun  6 13:24 HITS.44871837._088561.pool.root.1
[2025-06-06 13:25:45] -rw-r--r--. 1 boinc boinc       531 Jun  6 13:24 boinc_task_state.xml
[2025-06-06 13:25:45] -rw-------. 1 boinc boinc        95 Jun  6 13:24 pilot_heartbeat.json
[2025-06-06 13:25:45] -rw-------. 1 boinc boinc      1020 Jun  6 13:25 memory_monitor_summary.json
[2025-06-06 13:25:45] -rw-------. 1 boinc boinc   1598969 Jun  6 13:25 agis_ddmendpoints.agis.ALL.json
[2025-06-06 13:25:45] -rw-------. 1 boinc boinc    422254 Jun  6 13:25 log.44871837._088561.job.log.tgz.1
[2025-06-06 13:25:45] -rw-------. 1 boinc boinc      7695 Jun  6 13:25 heartbeat.json
[2025-06-06 13:25:45] -rw-r--r--. 1 boinc boinc      8192 Jun  6 13:25 boinc_mmap_file
[2025-06-06 13:25:45] -rw-------. 1 boinc boinc      4809 Jun  6 13:25 pilotlog.txt
[2025-06-06 13:25:45] -rw-r--r--. 1 boinc boinc        28 Jun  6 13:25 wrapper_checkpoint.txt
[2025-06-06 13:25:45] -rw-------. 1 boinc boinc   1660462 Jun  6 13:25 log.44871837._088561.job.log.1
[2025-06-06 13:25:45] -rw-------. 1 boinc boinc       357 Jun  6 13:25 output.list
[2025-06-06 13:25:45] -rw-r--r--. 1 boinc boinc       620 Jun  6 13:25 runtime_log
[2025-06-06 13:25:45] -rw-------. 1 boinc boinc   2099200 Jun  6 13:25 result.tar.gz
[2025-06-06 13:25:45] -rw-------. 1 boinc boinc       657 Jun  6 13:25 xMsNDmdoae7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmLocKDmkbv8km.diag
[2025-06-06 13:25:45] -rw-r--r--. 1 boinc boinc      8673 Jun  6 13:25 runtime_log.err
[2025-06-06 13:25:45] -rw-r--r--. 1 boinc boinc     20587 Jun  6 13:25 stderr.txt
[2025-06-06 13:25:45] HITS file was successfully produced:
[2025-06-06 13:25:45] -rw-------. 1 boinc boinc 198175503 Jun  6 13:24 shared/HITS.pool.root.1
[2025-06-06 13:25:45]  *** Contents of shared directory: ***
[2025-06-06 13:25:45] total 414700
[2025-06-06 13:25:45] -rw-r--r--. 2 boinc boinc 223843191 Jun  6 07:57 ATLAS.root_0
[2025-06-06 13:25:45] -rw-r--r--. 2 boinc boinc     15093 Jun  6 07:57 start_atlas.sh
[2025-06-06 13:25:45] -rw-r--r--. 2 boinc boinc    508878 Jun  6 07:57 input.tar.gz
[2025-06-06 13:25:45] -rw-------. 1 boinc boinc 198175503 Jun  6 13:24 HITS.pool.root.1
[2025-06-06 13:25:45] -rw-------. 1 boinc boinc   2099200 Jun  6 13:25 result.tar.gz
13:25:46 (20338): run_atlas exited; CPU time 71089.781870
13:25:46 (20338): called boinc_finish(0)

</stderr_txt>
]]>

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