Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:46:36 (960239): wrapper (7.7.26015): starting
20:46:36 (960239): wrapper: running run_atlas (--nthreads 10)
[2025-06-05 20:46:36] Arguments: --nthreads 10
[2025-06-05 20:46:36] Threads: 10
[2025-06-05 20:46:36] Checking for CVMFS
[2025-06-05 20:46:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 20:46:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 20:46:37] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 20:46:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 20:46:37] 2.12.6.0 12511 3510 210780 146837 1 282 24198385 32935936 11640 16776704 0 15045153 99.592 14265259 35711 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 20:46:37] CVMFS is ok
[2025-06-05 20:46:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 20:46:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 20:46:37] Further information can be found at the LHC@home message board.
[2025-06-05 20:46:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 20:46:37] Checking for apptainer binary...
[2025-06-05 20:46:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 20:46:37] Running /usr/bin/apptainer --version
[2025-06-05 20:46:37] apptainer version 1.4.1-1.el9
[2025-06-05 20:46:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 20:46:38] c-8-17.aglt2.org
[2025-06-05 20:46:38] apptainer works
[2025-06-05 20:46:38] Set ATHENA_PROC_NUMBER=10
[2025-06-05 20:46:38] Set ATHENA_CORE_NUMBER=10
[2025-06-05 20:46:38] Starting ATLAS job with PandaID=6669238004
[2025-06-05 20:46:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 01:31:07]  *** The last 200 lines of the pilot log: ***
[2025-06-06 01:31:07] 2025-06-06 05:30:52,033 | INFO     | log transfer has been attempted: DONE
[2025-06-06 01:31:07] 2025-06-06 05:30:52,033 | INFO     | job 6669238004 has finished - writing final server update
[2025-06-06 01:31:07] 2025-06-06 05:30:52,033 | INFO     | total number of processed events: 400 (read)
[2025-06-06 01:31:07] 2025-06-06 05:30:52,047 | INFO     | executing command: lscpu
[2025-06-06 01:31:07] 2025-06-06 05:30:52,089 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 01:31:07] 2025-06-06 05:30:54,274 | INFO     | monitor loop #1061: job 0:6669238004 is in state 'finished'
[2025-06-06 01:31:07] 2025-06-06 05:30:54,274 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 01:31:07] 2025-06-06 05:30:54,918 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 01:31:07] 2025-06-06 05:30:54,919 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6669238004/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 01:31:07] 2025-06-06 05:30:54,919 | INFO     | extracted standard info from prmon json
[2025-06-06 01:31:07] 2025-06-06 05:30:54,919 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 01:31:07] 2025-06-06 05:30:54,919 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 01:31:07] 2025-06-06 05:30:54,920 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 01:31:07] 2025-06-06 05:30:54,920 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 01:31:07] 2025-06-06 05:30:54,923 | INFO     | fitting pss+swap vs Time
[2025-06-06 01:31:07] 2025-06-06 05:30:54,923 | INFO     | sum of square deviations: 6734026149.899666
[2025-06-06 01:31:07] 2025-06-06 05:30:54,924 | INFO     | sum of deviations: -9278812163.835121
[2025-06-06 01:31:07] 2025-06-06 05:30:54,925 | INFO     | mean x: 1749179361.293907
[2025-06-06 01:31:07] 2025-06-06 05:30:54,925 | INFO     | mean y: 2244239.8028673837
[2025-06-06 01:31:07] 2025-06-06 05:30:54,925 | INFO     | -- intersect: 2412437840.631857
[2025-06-06 01:31:07] 2025-06-06 05:30:54,925 | INFO     | intersect: 2412437840.631857
[2025-06-06 01:31:07] 2025-06-06 05:30:54,925 | INFO     | chi2: 2.701412452431501
[2025-06-06 01:31:07] 2025-06-06 05:30:54,925 | INFO     | sum of square deviations: 6378444491.959826
[2025-06-06 01:31:07] 2025-06-06 05:30:54,927 | INFO     | sum of deviations: 6338401806.927005
[2025-06-06 01:31:07] 2025-06-06 05:30:54,927 | INFO     | mean x: 1749179208.7992702
[2025-06-06 01:31:07] 2025-06-06 05:30:54,927 | INFO     | mean y: 2250833.6350364964
[2025-06-06 01:31:07] 2025-06-06 05:30:54,927 | INFO     | -- intersect: -1735947354.2880313
[2025-06-06 01:31:07] 2025-06-06 05:30:54,927 | INFO     | intersect: -1735947354.2880313
[2025-06-06 01:31:07] 2025-06-06 05:30:54,927 | INFO     | chi2: 2.0416534456579125
[2025-06-06 01:31:07] 2025-06-06 05:30:54,927 | INFO     | current chi2=2.0416534456579125 (change=24.42274248716627 %)
[2025-06-06 01:31:07] 2025-06-06 05:30:54,927 | INFO     | right removable region: 273
[2025-06-06 01:31:07] 2025-06-06 05:30:54,928 | INFO     | sum of square deviations: 6378394471.959826
[2025-06-06 01:31:07] 2025-06-06 05:30:54,929 | INFO     | sum of deviations: -53021000586.56572
[2025-06-06 01:31:07] 2025-06-06 05:30:54,929 | INFO     | mean x: 1749179513.7992702
[2025-06-06 01:31:07] 2025-06-06 05:30:54,929 | INFO     | mean y: 2262886.1715328465
[2025-06-06 01:31:07] 2025-06-06 05:30:54,929 | INFO     | -- intersect: 14542481186.383303
[2025-06-06 01:31:07] 2025-06-06 05:30:54,930 | INFO     | intersect: 14542481186.383303
[2025-06-06 01:31:07] 2025-06-06 05:30:54,930 | INFO     | chi2: 1.135486153337971
[2025-06-06 01:31:07] 2025-06-06 05:30:54,930 | INFO     | current chi2=1.135486153337971 (change=57.966946057573075 %)
[2025-06-06 01:31:07] 2025-06-06 05:30:54,930 | INFO     | sum of square deviations: 6035523688.609695
[2025-06-06 01:31:07] 2025-06-06 05:30:54,931 | INFO     | sum of deviations: -50731680662.60597
[2025-06-06 01:31:07] 2025-06-06 05:30:54,931 | INFO     | mean x: 1749179666.3011153
[2025-06-06 01:31:07] 2025-06-06 05:30:54,931 | INFO     | mean y: 2261832.3531598514
[2025-06-06 01:31:07] 2025-06-06 05:30:54,932 | INFO     | -- intersect: 14705016527.820715
[2025-06-06 01:31:07] 2025-06-06 05:30:54,932 | INFO     | intersect: 14705016527.820715
[2025-06-06 01:31:07] 2025-06-06 05:30:54,932 | INFO     | chi2: 1.0892120371390728
[2025-06-06 01:31:07] 2025-06-06 05:30:54,932 | INFO     | current chi2=1.0892120371390728 (change=4.075269087418364 %)
[2025-06-06 01:31:07] 2025-06-06 05:30:54,932 | INFO     | left removable region: 20
[2025-06-06 01:31:07] 2025-06-06 05:30:54,932 | INFO     | sum of square deviations: 5021343173.565212
[2025-06-06 01:31:07] 2025-06-06 05:30:54,933 | INFO     | sum of deviations: -13295404011.000006
[2025-06-06 01:31:07] 2025-06-06 05:30:54,933 | INFO     | mean x: 1749179788.3043478
[2025-06-06 01:31:07] 2025-06-06 05:30:54,933 | INFO     | mean y: 2258277.6363636362
[2025-06-06 01:31:07] 2025-06-06 05:30:54,933 | INFO     | -- intersect: 4633698744.76335
[2025-06-06 01:31:07] 2025-06-06 05:30:54,934 | INFO     | intersect: 4633698744.76335
[2025-06-06 01:31:07] 2025-06-06 05:30:54,934 | INFO     | chi2: 0.3081507853845611
[2025-06-06 01:31:07] 2025-06-06 05:30:54,934 | INFO     | -- intersect: 4633698744.76335
[2025-06-06 01:31:07] 2025-06-06 05:30:54,934 | INFO     | current memory leak: -2.65 B/s (using 253 data points, chi2=0.31)
[2025-06-06 01:31:07] 2025-06-06 05:30:54,934 | INFO     | ..............................
[2025-06-06 01:31:07] 2025-06-06 05:30:54,934 | INFO     | . Timing measurements:
[2025-06-06 01:31:07] 2025-06-06 05:30:54,935 | INFO     | . get job = 0 s
[2025-06-06 01:31:07] 2025-06-06 05:30:54,935 | INFO     | . initial setup = 5 s
[2025-06-06 01:31:07] 2025-06-06 05:30:54,935 | INFO     | . payload setup = 17 s
[2025-06-06 01:31:07] 2025-06-06 05:30:54,935 | INFO     | . stage-in = 0 s
[2025-06-06 01:31:07] 2025-06-06 05:30:54,935 | INFO     | . payload execution = 16974 s
[2025-06-06 01:31:07] 2025-06-06 05:30:54,935 | INFO     | . stage-out = 2 s
[2025-06-06 01:31:07] 2025-06-06 05:30:54,935 | INFO     | . log creation = 0 s
[2025-06-06 01:31:07] 2025-06-06 05:30:54,935 | INFO     | ..............................
[2025-06-06 01:31:07] 2025-06-06 05:30:55,002 | INFO     | 
[2025-06-06 01:31:07] 2025-06-06 05:30:55,003 | INFO     | job summary report
[2025-06-06 01:31:07] 2025-06-06 05:30:55,003 | INFO     | --------------------------------------------------
[2025-06-06 01:31:07] 2025-06-06 05:30:55,003 | INFO     | PanDA job id: 6669238004
[2025-06-06 01:31:07] 2025-06-06 05:30:55,003 | INFO     | task id: 44871837
[2025-06-06 01:31:07] 2025-06-06 05:30:55,003 | INFO     | errors: (none)
[2025-06-06 01:31:07] 2025-06-06 05:30:55,004 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 01:31:07] 2025-06-06 05:30:55,004 | INFO     | pilot state: finished 
[2025-06-06 01:31:07] 2025-06-06 05:30:55,004 | INFO     | transexitcode: 0
[2025-06-06 01:31:07] 2025-06-06 05:30:55,004 | INFO     | exeerrorcode: 0
[2025-06-06 01:31:07] 2025-06-06 05:30:55,004 | INFO     | exeerrordiag: 
[2025-06-06 01:31:07] 2025-06-06 05:30:55,004 | INFO     | exitcode: 0
[2025-06-06 01:31:07] 2025-06-06 05:30:55,004 | INFO     | exitmsg: OK
[2025-06-06 01:31:07] 2025-06-06 05:30:55,004 | INFO     | cpuconsumptiontime: 62879 s
[2025-06-06 01:31:07] 2025-06-06 05:30:55,004 | INFO     | nevents: 400
[2025-06-06 01:31:07] 2025-06-06 05:30:55,005 | INFO     | neventsw: 0
[2025-06-06 01:31:07] 2025-06-06 05:30:55,005 | INFO     | pid: 972835
[2025-06-06 01:31:07] 2025-06-06 05:30:55,005 | INFO     | pgrp: 972835
[2025-06-06 01:31:07] 2025-06-06 05:30:55,005 | INFO     | corecount: 10
[2025-06-06 01:31:07] 2025-06-06 05:30:55,005 | INFO     | event service: False
[2025-06-06 01:31:07] 2025-06-06 05:30:55,005 | INFO     | sizes: {0: 2397221, 1: 2397420, 10: 2397626, 12: 2397654, 16996: 2429232, 16999: 2438173, 17001: 2438357, 17005: 2438527}
[2025-06-06 01:31:07] 2025-06-06 05:30:55,005 | INFO     | --------------------------------------------------
[2025-06-06 01:31:07] 2025-06-06 05:30:55,005 | INFO     | 
[2025-06-06 01:31:07] 2025-06-06 05:30:55,006 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 01:31:07] 2025-06-06 05:30:55,023 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 01:31:07] 2025-06-06 05:30:55,024 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 01:31:07] 2025-06-06 05:30:55,024 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 01:31:07] 2025-06-06 05:30:55,024 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 01:31:07] 2025-06-06 05:30:55,024 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 01:31:07] 2025-06-06 05:30:55,024 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 01:31:07] 2025-06-06 05:30:55,024 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 01:31:07] 2025-06-06 05:30:55,024 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 01:31:07] 2025-06-06 05:30:55,025 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 01:31:07] 2025-06-06 05:30:55,025 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 01:31:07] 2025-06-06 05:30:55,025 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 01:31:07] 2025-06-06 05:30:55,025 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 01:31:07] 2025-06-06 05:30:55,025 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 01:31:07] 2025-06-06 05:30:55,025 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 01:31:07] 2025-06-06 05:30:55,025 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 01:31:07] 2025-06-06 05:30:55,025 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 01:31:07] 2025-06-06 05:30:55,025 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 01:31:07] 2025-06-06 05:30:55,025 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 01:31:07] 2025-06-06 05:30:55,026 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 01:31:07] 2025-06-06 05:30:55,026 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 01:31:07] 2025-06-06 05:30:55,026 | INFO     | job 6669238004 has completed (purged errors)
[2025-06-06 01:31:07] 2025-06-06 05:30:55,026 | INFO     | overall cleanup function is called
[2025-06-06 01:31:07] 2025-06-06 05:30:56,034 | INFO     | --- collectZombieJob: --- 10, [972835]
[2025-06-06 01:31:07] 2025-06-06 05:30:56,034 | INFO     | zombie collector waiting for pid 972835
[2025-06-06 01:31:07] 2025-06-06 05:30:56,034 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 01:31:07] 2025-06-06 05:30:56,034 | INFO     | collected zombie processes
[2025-06-06 01:31:07] 2025-06-06 05:30:56,034 | INFO     | will attempt to kill all subprocesses of pid=972835
[2025-06-06 01:31:07] 2025-06-06 05:30:56,235 | INFO     | process IDs to be killed: [972835] (in reverse order)
[2025-06-06 01:31:07] 2025-06-06 05:30:56,295 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 01:31:07] 2025-06-06 05:30:56,296 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 01:31:07] 2025-06-06 05:30:56,303 | INFO     | did not find any defunct processes belonging to 972835
[2025-06-06 01:31:07] 2025-06-06 05:30:56,310 | INFO     | did not find any defunct processes belonging to 972835
[2025-06-06 01:31:07] 2025-06-06 05:30:56,310 | INFO     | ready for new job
[2025-06-06 01:31:07] 2025-06-06 05:30:56,310 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 01:31:07] 2025-06-06 05:30:56,312 | INFO     | **************************************
[2025-06-06 01:31:07] 2025-06-06 05:30:56,312 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 01:31:07] 2025-06-06 05:30:56,312 | INFO     | **************************************
[2025-06-06 01:31:07] 2025-06-06 05:30:56,312 | INFO     | 
[2025-06-06 01:31:07] 2025-06-06 05:30:56,326 | INFO     | architecture information:
[2025-06-06 01:31:07] 2025-06-06 05:30:56,326 | INFO     | executing command: cat /etc/os-release
[2025-06-06 01:31:07] 2025-06-06 05:30:56,335 | INFO     | cat /etc/os-release:
[2025-06-06 01:31:07] NAME="CentOS Linux"
[2025-06-06 01:31:07] VERSION="7 (Core)"
[2025-06-06 01:31:07] ID="centos"
[2025-06-06 01:31:07] ID_LIKE="rhel fedora"
[2025-06-06 01:31:07] VERSION_ID="7"
[2025-06-06 01:31:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 01:31:07] ANSI_COLOR="0;31"
[2025-06-06 01:31:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 01:31:07] HOME_URL="https://www.centos.org/"
[2025-06-06 01:31:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 01:31:07] 
[2025-06-06 01:31:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 01:31:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 01:31:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 01:31:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 01:31:07] 
[2025-06-06 01:31:07] 2025-06-06 05:30:56,336 | INFO     | **************************************
[2025-06-06 01:31:07] 2025-06-06 05:30:56,839 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 01:31:07] 2025-06-06 05:30:56,848 | INFO     | sufficient remaining disk space (76547096576 B)
[2025-06-06 01:31:07] 2025-06-06 05:30:56,848 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 01:31:07] 2025-06-06 05:30:56,849 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 01:31:07] 2025-06-06 05:30:56,849 | INFO     | update_server=False
[2025-06-06 01:31:07] 2025-06-06 05:30:56,849 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 01:31:07] 2025-06-06 05:30:56,849 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 01:31:07] 2025-06-06 05:30:56,849 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 01:31:07] 2025-06-06 05:30:56,849 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 01:31:07] 2025-06-06 05:30:56,849 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 01:31:07] 2025-06-06 05:30:56,850 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 01:31:07] 2025-06-06 05:30:56,850 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 01:31:07] 2025-06-06 05:30:56,850 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 01:31:07] 2025-06-06 05:30:57,445 | INFO     | all data control threads have been joined
[2025-06-06 01:31:07] 2025-06-06 05:30:57,782 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 01:31:07] 2025-06-06 05:30:57,783 | INFO     | aborting loop
[2025-06-06 01:31:07] 2025-06-06 05:30:57,854 | INFO     | [job] retrieve thread has finished
[2025-06-06 01:31:07] 2025-06-06 05:30:57,855 | INFO     | [job] queue monitor thread has finished
[2025-06-06 01:31:07] 2025-06-06 05:30:57,862 | INFO     | all payload control threads have been joined
[2025-06-06 01:31:07] 2025-06-06 05:30:58,163 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 01:31:07] 2025-06-06 05:30:58,407 | INFO     | [payload] failed_post thread has finished
[2025-06-06 01:31:07] 2025-06-06 05:30:58,443 | INFO     | all job control threads have been joined
[2025-06-06 01:31:07] 2025-06-06 05:30:58,450 | INFO     | [data] control thread has finished
[2025-06-06 01:31:07] 2025-06-06 05:30:58,721 | INFO     | [payload] validate_post thread has finished
[2025-06-06 01:31:07] 2025-06-06 05:30:58,788 | INFO     | [job] job monitor thread has finished
[2025-06-06 01:31:07] 2025-06-06 05:30:58,799 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 01:31:07] 2025-06-06 05:30:58,855 | INFO     | [data] copytool_out thread has finished
[2025-06-06 01:31:07] 2025-06-06 05:30:58,867 | INFO     | [payload] control thread has finished
[2025-06-06 01:31:07] 2025-06-06 05:30:59,032 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 01:31:07] 2025-06-06 05:30:59,239 | INFO     | [job] validate thread has finished
[2025-06-06 01:31:07] 2025-06-06 05:30:59,266 | INFO     | [data] copytool_in thread has finished
[2025-06-06 01:31:07] 2025-06-06 05:30:59,332 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 01:31:07] 2025-06-06 05:30:59,448 | INFO     | [job] control thread has finished
[2025-06-06 01:31:07] 2025-06-06 05:31:00,855 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 01:31:07] 2025-06-06 05:31:01,742 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140682899994432)>', '<ExcThread(monitor, started 140682165470976)>']
[2025-06-06 01:31:07] 2025-06-06 05:31:01,875 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 01:31:07] 2025-06-06 05:31:01,875 | INFO     | [monitor] control thread has ended
[2025-06-06 01:31:07] 2025-06-06 05:31:06,767 | INFO     | all workflow threads have been joined
[2025-06-06 01:31:07] 2025-06-06 05:31:06,767 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 01:31:07] 2025-06-06 05:31:06,767 | INFO     | traces error code: 0
[2025-06-06 01:31:07] 2025-06-06 05:31:06,768 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 01:31:07] 2025-06-06 05:31:06,918 [wrapper] ==== pilot stdout END ====
[2025-06-06 01:31:07] 2025-06-06 05:31:06,920 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 01:31:07] 2025-06-06 05:31:06,922 [wrapper] pilotpid: 964525
[2025-06-06 01:31:07] 2025-06-06 05:31:06,923 [wrapper] Pilot exit status: 0
[2025-06-06 01:31:07] 2025-06-06 05:31:06,931 [wrapper] pandaids: 6669238004
[2025-06-06 01:31:07] 2025-06-06 05:31:06,970 [wrapper] cleanup supervisor_pilot 2141755 964526
[2025-06-06 01:31:07] 2025-06-06 05:31:06,973 [wrapper] Test setup, not cleaning
[2025-06-06 01:31:07] 2025-06-06 05:31:06,975 [wrapper] apfmon messages muted
[2025-06-06 01:31:07] 2025-06-06 05:31:06,977 [wrapper] ==== wrapper stdout END ====
[2025-06-06 01:31:07] 2025-06-06 05:31:06,979 [wrapper] ==== wrapper stderr END ====
[2025-06-06 01:31:07]  *** Error codes and diagnostics ***
[2025-06-06 01:31:07]     "exeErrorCode": 0,
[2025-06-06 01:31:07]     "exeErrorDiag": "",
[2025-06-06 01:31:07]     "pilotErrorCode": 0,
[2025-06-06 01:31:07]     "pilotErrorDiag": "",
[2025-06-06 01:31:07]  *** Listing of results directory ***
[2025-06-06 01:31:07] total 423064
[2025-06-06 01:31:07] -rw-r--r--. 1 boincer umatlas    495897 May 29 00:11 pilot3.tar.gz
[2025-06-06 01:31:07] -rwx------. 1 boincer umatlas     37140 May 29 00:34 runpilot2-wrapper.sh
[2025-06-06 01:31:07] -rw-r--r--. 1 boincer umatlas      5111 May 29 00:34 queuedata.json
[2025-06-06 01:31:07] -rw-r--r--. 1 boincer umatlas       100 Jun  5 20:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 01:31:07] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 20:46 run_atlas
[2025-06-06 01:31:07] -rw-r--r--. 1 boincer umatlas       105 Jun  5 20:46 job.xml
[2025-06-06 01:31:07] -rw-r--r--. 2 boincer umatlas 226004728 Jun  5 20:46 EVNT.44871834._003689.pool.root.1
[2025-06-06 01:31:07] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 20:46 start_atlas.sh
[2025-06-06 01:31:07] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 20:46 shared
[2025-06-06 01:31:07] -rw-r--r--. 2 boincer umatlas    508875 Jun  5 20:46 input.tar.gz
[2025-06-06 01:31:07] -rw-r--r--. 1 boincer umatlas         0 Jun  5 20:46 boinc_lockfile
[2025-06-06 01:31:07] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 20:46 pandaJob.out
[2025-06-06 01:31:07] -rw-------. 1 boincer umatlas    987721 Jun  5 20:47 agis_schedconf.cvmfs.json
[2025-06-06 01:31:07] drwx------. 4 boincer umatlas      4096 Jun  5 20:47 pilot3
[2025-06-06 01:31:07] -rw-r--r--. 1 boincer umatlas      6657 Jun  6 01:27 init_data.xml
[2025-06-06 01:31:07] -rw-------. 1 boincer umatlas        95 Jun  6 01:30 pilot_heartbeat.json
[2025-06-06 01:31:07] -rw-------. 1 boincer umatlas 199646155 Jun  6 01:30 HITS.44871837._094975.pool.root.1
[2025-06-06 01:31:07] -rw-r--r--. 1 boincer umatlas       530 Jun  6 01:30 boinc_task_state.xml
[2025-06-06 01:31:07] -rw-------. 1 boincer umatlas      1042 Jun  6 01:30 memory_monitor_summary.json
[2025-06-06 01:31:07] -rw-------. 1 boincer umatlas   1598969 Jun  6 01:30 agis_ddmendpoints.agis.ALL.json
[2025-06-06 01:31:07] -rw-------. 1 boincer umatlas    459557 Jun  6 01:30 log.44871837._094975.job.log.tgz.1
[2025-06-06 01:31:07] -rw-------. 1 boincer umatlas      7717 Jun  6 01:30 heartbeat.json
[2025-06-06 01:31:07] -rw-r--r--. 1 boincer umatlas        28 Jun  6 01:31 wrapper_checkpoint.txt
[2025-06-06 01:31:07] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 01:31 boinc_mmap_file
[2025-06-06 01:31:07] -rw-------. 1 boincer umatlas      4476 Jun  6 01:31 pilotlog.txt
[2025-06-06 01:31:07] -rw-------. 1 boincer umatlas   1405003 Jun  6 01:31 log.44871837._094975.job.log.1
[2025-06-06 01:31:07] -rw-------. 1 boincer umatlas       357 Jun  6 01:31 output.list
[2025-06-06 01:31:07] -rw-r--r--. 1 boincer umatlas       620 Jun  6 01:31 runtime_log
[2025-06-06 01:31:07] -rw-------. 1 boincer umatlas   1884160 Jun  6 01:31 result.tar.gz
[2025-06-06 01:31:07] -rw-r--r--. 1 boincer umatlas      8652 Jun  6 01:31 runtime_log.err
[2025-06-06 01:31:07] -rw-------. 1 boincer umatlas       655 Jun  6 01:31 6zHLDmc9je7n9Rq4apOajLDm4fhM0noT9bVof3QYDmedUKDmPmfOvm.diag
[2025-06-06 01:31:07] -rw-r--r--. 1 boincer umatlas     21158 Jun  6 01:31 stderr.txt
[2025-06-06 01:31:07] HITS file was successfully produced:
[2025-06-06 01:31:07] -rw-------. 1 boincer umatlas 199646155 Jun  6 01:30 shared/HITS.pool.root.1
[2025-06-06 01:31:07]  *** Contents of shared directory: ***
[2025-06-06 01:31:07] total 418040
[2025-06-06 01:31:07] -rw-r--r--. 2 boincer umatlas 226004728 Jun  5 20:46 ATLAS.root_0
[2025-06-06 01:31:07] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 20:46 start_atlas.sh
[2025-06-06 01:31:07] -rw-r--r--. 2 boincer umatlas    508875 Jun  5 20:46 input.tar.gz
[2025-06-06 01:31:07] -rw-------. 1 boincer umatlas 199646155 Jun  6 01:30 HITS.pool.root.1
[2025-06-06 01:31:07] -rw-------. 1 boincer umatlas   1884160 Jun  6 01:31 result.tar.gz
01:31:09 (960239): run_atlas exited; CPU time 63345.493863
01:31:09 (960239): called boinc_finish(0)

</stderr_txt>
]]>

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