Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:16:50 (3278603): wrapper (7.7.26015): starting
20:16:50 (3278603): wrapper: running run_atlas (--nthreads 10)
[2025-06-05 20:16:50] Arguments: --nthreads 10
[2025-06-05 20:16:50] Threads: 10
[2025-06-05 20:16:50] Checking for CVMFS
[2025-06-05 20:16:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 20:16:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 20:16:50] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 20:16:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 20:16:50] 2.12.6.0 3485378 181991 450376 146837 3 12 26867924 32503809 16628 130560 2 390275903 99.651 394972868 25499 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 20:16:50] CVMFS is ok
[2025-06-05 20:16:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 20:16:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 20:16:50] Further information can be found at the LHC@home message board.
[2025-06-05 20:16:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 20:16:50] Checking for apptainer binary...
[2025-06-05 20:16:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 20:16:50] Running /usr/bin/apptainer --version
[2025-06-05 20:16:51] apptainer version 1.4.1-1.el9
[2025-06-05 20:16:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 20:16:51] c-4-35.aglt2.org
[2025-06-05 20:16:51] apptainer works
[2025-06-05 20:16:51] Set ATHENA_PROC_NUMBER=10
[2025-06-05 20:16:51] Set ATHENA_CORE_NUMBER=10
[2025-06-05 20:16:51] Starting ATLAS job with PandaID=6668730720
[2025-06-05 20:16:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 23:38:52]  *** The last 200 lines of the pilot log: ***
[2025-06-05 23:38:52] 2025-06-06 03:38:29,631 | WARNING  | process 3289303 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 23:38:52] 2025-06-06 03:38:29,632 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668730720/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 23:38:52] 2025-06-06 03:38:30,250 | INFO     | number of running child processes to parent process 3289303: 1
[2025-06-05 23:38:52] 2025-06-06 03:38:30,250 | INFO     | maximum number of monitored processes: 6
[2025-06-05 23:38:52] 2025-06-06 03:38:30,401 | INFO     | PID=3282164 has CPU usage=14.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 23:38:52] 2025-06-06 03:38:30,402 | INFO     | .. there are 18 such processes running
[2025-06-05 23:38:52] 2025-06-06 03:38:32,485 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 23:38:52] 2025-06-06 03:38:32,485 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668730720/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 23:38:52] 2025-06-06 03:38:32,486 | INFO     | extracted standard info from prmon json
[2025-06-05 23:38:52] 2025-06-06 03:38:32,486 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 23:38:52] 2025-06-06 03:38:32,486 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 23:38:52] 2025-06-06 03:38:32,486 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 23:38:52] 2025-06-06 03:38:32,486 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 23:38:52] 2025-06-06 03:38:32,489 | INFO     | fitting pss+swap vs Time
[2025-06-05 23:38:52] 2025-06-06 03:38:32,489 | INFO     | sum of square deviations: 2406868257.0909133
[2025-06-05 23:38:52] 2025-06-06 03:38:32,490 | INFO     | sum of deviations: -53579911135.545456
[2025-06-05 23:38:52] 2025-06-06 03:38:32,490 | INFO     | mean x: 1749175070.5454545
[2025-06-05 23:38:52] 2025-06-06 03:38:32,490 | INFO     | mean y: 2301369.005050505
[2025-06-05 23:38:52] 2025-06-06 03:38:32,490 | INFO     | -- intersect: 38941135916.44029
[2025-06-05 23:38:52] 2025-06-06 03:38:32,490 | INFO     | intersect: 38941135916.44029
[2025-06-05 23:38:52] 2025-06-06 03:38:32,490 | INFO     | chi2: 3.0855743568378404
[2025-06-05 23:38:52] 2025-06-06 03:38:32,491 | INFO     | sum of square deviations: 2229090924.5803165
[2025-06-05 23:38:52] 2025-06-06 03:38:32,491 | INFO     | sum of deviations: -40498832760.05181
[2025-06-05 23:38:52] 2025-06-06 03:38:32,491 | INFO     | mean x: 1749174918.046632
[2025-06-05 23:38:52] 2025-06-06 03:38:32,492 | INFO     | mean y: 2312401.2279792745
[2025-06-05 23:38:52] 2025-06-06 03:38:32,492 | INFO     | -- intersect: 31781878543.145332
[2025-06-05 23:38:52] 2025-06-06 03:38:32,492 | INFO     | intersect: 31781878543.145332
[2025-06-05 23:38:52] 2025-06-06 03:38:32,492 | INFO     | chi2: 2.438797089583381
[2025-06-05 23:38:52] 2025-06-06 03:38:32,492 | INFO     | current chi2=2.438797089583381 (change=20.961324941697082 %)
[2025-06-05 23:38:52] 2025-06-06 03:38:32,492 | INFO     | right removable region: 192
[2025-06-05 23:38:52] 2025-06-06 03:38:32,492 | INFO     | sum of square deviations: 2229085434.5803165
[2025-06-05 23:38:52] 2025-06-06 03:38:32,493 | INFO     | sum of deviations: -87428081058.32649
[2025-06-05 23:38:52] 2025-06-06 03:38:32,493 | INFO     | mean x: 1749175223.046632
[2025-06-05 23:38:52] 2025-06-06 03:38:32,493 | INFO     | mean y: 2330195.03626943
[2025-06-05 23:38:52] 2025-06-06 03:38:32,493 | INFO     | -- intersect: 68607611452.24827
[2025-06-05 23:38:52] 2025-06-06 03:38:32,493 | INFO     | intersect: 68607611452.24827
[2025-06-05 23:38:52] 2025-06-06 03:38:32,493 | INFO     | chi2: 1.2820722278084844
[2025-06-05 23:38:52] 2025-06-06 03:38:32,494 | INFO     | current chi2=1.2820722278084844 (change=58.44947878286174 %)
[2025-06-05 23:38:52] 2025-06-06 03:38:32,494 | INFO     | sum of square deviations: 2060291052.6595771
[2025-06-05 23:38:52] 2025-06-06 03:38:32,494 | INFO     | sum of deviations: -94273773633.71283
[2025-06-05 23:38:52] 2025-06-06 03:38:32,495 | INFO     | mean x: 1749175375.5425532
[2025-06-05 23:38:52] 2025-06-06 03:38:32,495 | INFO     | mean y: 2336352.526595745
[2025-06-05 23:38:52] 2025-06-06 03:38:32,495 | INFO     | -- intersect: 80040233515.98625
[2025-06-05 23:38:52] 2025-06-06 03:38:32,495 | INFO     | intersect: 80040233515.98625
[2025-06-05 23:38:52] 2025-06-06 03:38:32,495 | INFO     | chi2: 1.1088547683925876
[2025-06-05 23:38:52] 2025-06-06 03:38:32,495 | INFO     | current chi2=1.1088547683925876 (change=13.510741100131844 %)
[2025-06-05 23:38:52] 2025-06-06 03:38:32,495 | INFO     | left removable region: 20
[2025-06-05 23:38:52] 2025-06-06 03:38:32,495 | INFO     | sum of square deviations: 1577756528.7906997
[2025-06-05 23:38:52] 2025-06-06 03:38:32,496 | INFO     | sum of deviations: -69416906794.79073
[2025-06-05 23:38:52] 2025-06-06 03:38:32,496 | INFO     | mean x: 1749175497.5348837
[2025-06-05 23:38:52] 2025-06-06 03:38:32,496 | INFO     | mean y: 2337930.715116279
[2025-06-05 23:38:52] 2025-06-06 03:38:32,496 | INFO     | -- intersect: 76961203423.84485
[2025-06-05 23:38:52] 2025-06-06 03:38:32,496 | INFO     | intersect: 76961203423.84485
[2025-06-05 23:38:52] 2025-06-06 03:38:32,497 | INFO     | chi2: 0.42058880284842287
[2025-06-05 23:38:52] 2025-06-06 03:38:32,497 | INFO     | -- intersect: 76961203423.84485
[2025-06-05 23:38:52] 2025-06-06 03:38:32,497 | INFO     | current memory leak: -44.00 B/s (using 172 data points, chi2=0.42)
[2025-06-05 23:38:52] 2025-06-06 03:38:32,497 | INFO     | ..............................
[2025-06-05 23:38:52] 2025-06-06 03:38:32,497 | INFO     | . Timing measurements:
[2025-06-05 23:38:52] 2025-06-06 03:38:32,497 | INFO     | . get job = 0 s
[2025-06-05 23:38:52] 2025-06-06 03:38:32,497 | INFO     | . initial setup = 3 s
[2025-06-05 23:38:52] 2025-06-06 03:38:32,498 | INFO     | . payload setup = 8 s
[2025-06-05 23:38:52] 2025-06-06 03:38:32,498 | INFO     | . stage-in = 0 s
[2025-06-05 23:38:52] 2025-06-06 03:38:32,498 | INFO     | . payload execution = 12048 s
[2025-06-05 23:38:52] 2025-06-06 03:38:32,498 | INFO     | . stage-out = 2 s
[2025-06-05 23:38:52] 2025-06-06 03:38:32,498 | INFO     | . log creation = 0 s
[2025-06-05 23:38:52] 2025-06-06 03:38:32,498 | INFO     | ..............................
[2025-06-05 23:38:52] 2025-06-06 03:38:32,563 | INFO     | 
[2025-06-05 23:38:52] 2025-06-06 03:38:32,564 | INFO     | job summary report
[2025-06-05 23:38:52] 2025-06-06 03:38:32,564 | INFO     | --------------------------------------------------
[2025-06-05 23:38:52] 2025-06-06 03:38:32,564 | INFO     | PanDA job id: 6668730720
[2025-06-05 23:38:52] 2025-06-06 03:38:32,564 | INFO     | task id: 44871837
[2025-06-05 23:38:52] 2025-06-06 03:38:32,564 | INFO     | errors: (none)
[2025-06-05 23:38:52] 2025-06-06 03:38:32,564 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 23:38:52] 2025-06-06 03:38:32,564 | INFO     | pilot state: finished 
[2025-06-05 23:38:52] 2025-06-06 03:38:32,564 | INFO     | transexitcode: 0
[2025-06-05 23:38:52] 2025-06-06 03:38:32,564 | INFO     | exeerrorcode: 0
[2025-06-05 23:38:52] 2025-06-06 03:38:32,564 | INFO     | exeerrordiag: 
[2025-06-05 23:38:52] 2025-06-06 03:38:32,564 | INFO     | exitcode: 0
[2025-06-05 23:38:52] 2025-06-06 03:38:32,564 | INFO     | exitmsg: OK
[2025-06-05 23:38:52] 2025-06-06 03:38:32,564 | INFO     | cpuconsumptiontime: 62515 s
[2025-06-05 23:38:52] 2025-06-06 03:38:32,564 | INFO     | nevents: 400
[2025-06-05 23:38:52] 2025-06-06 03:38:32,565 | INFO     | neventsw: 0
[2025-06-05 23:38:52] 2025-06-06 03:38:32,565 | INFO     | pid: 3289303
[2025-06-05 23:38:52] 2025-06-06 03:38:32,565 | INFO     | pgrp: 3289303
[2025-06-05 23:38:52] 2025-06-06 03:38:32,565 | INFO     | corecount: 10
[2025-06-05 23:38:52] 2025-06-06 03:38:32,565 | INFO     | event service: False
[2025-06-05 23:38:52] 2025-06-06 03:38:32,565 | INFO     | sizes: {0: 2397164, 1: 2397419, 2: 2397419, 6: 2397653, 12: 2397681, 12059: 2426881, 12060: 2427008, 12062: 2436005, 12063: 2436061, 12066: 2436231}
[2025-06-05 23:38:52] 2025-06-06 03:38:32,565 | INFO     | --------------------------------------------------
[2025-06-05 23:38:52] 2025-06-06 03:38:32,565 | INFO     | 
[2025-06-05 23:38:52] 2025-06-06 03:38:32,565 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 23:38:52] 2025-06-06 03:38:32,578 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 23:38:52] 2025-06-06 03:38:32,578 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 23:38:52] 2025-06-06 03:38:32,578 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 23:38:52] 2025-06-06 03:38:32,578 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 23:38:52] 2025-06-06 03:38:32,578 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 23:38:52] 2025-06-06 03:38:32,578 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 23:38:52] 2025-06-06 03:38:32,578 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 23:38:52] 2025-06-06 03:38:32,578 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 23:38:52] 2025-06-06 03:38:32,579 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 23:38:52] 2025-06-06 03:38:32,579 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 23:38:52] 2025-06-06 03:38:32,579 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 23:38:52] 2025-06-06 03:38:32,579 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 23:38:52] 2025-06-06 03:38:32,579 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 23:38:52] 2025-06-06 03:38:32,579 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 23:38:52] 2025-06-06 03:38:32,579 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 23:38:52] 2025-06-06 03:38:32,579 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 23:38:52] 2025-06-06 03:38:32,579 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 23:38:52] 2025-06-06 03:38:32,579 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 23:38:52] 2025-06-06 03:38:32,579 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 23:38:52] 2025-06-06 03:38:32,579 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 23:38:52] 2025-06-06 03:38:32,579 | INFO     | job 6668730720 has completed (purged errors)
[2025-06-05 23:38:52] 2025-06-06 03:38:32,580 | INFO     | overall cleanup function is called
[2025-06-05 23:38:52] 2025-06-06 03:38:33,586 | INFO     | --- collectZombieJob: --- 10, [3289303]
[2025-06-05 23:38:52] 2025-06-06 03:38:33,586 | INFO     | zombie collector waiting for pid 3289303
[2025-06-05 23:38:52] 2025-06-06 03:38:33,587 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 23:38:52] 2025-06-06 03:38:33,587 | INFO     | collected zombie processes
[2025-06-05 23:38:52] 2025-06-06 03:38:33,587 | INFO     | will attempt to kill all subprocesses of pid=3289303
[2025-06-05 23:38:52] 2025-06-06 03:38:33,883 | INFO     | process IDs to be killed: [3289303] (in reverse order)
[2025-06-05 23:38:52] 2025-06-06 03:38:33,951 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 23:38:52] 2025-06-06 03:38:33,951 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 23:38:52] 2025-06-06 03:38:33,964 | INFO     | did not find any defunct processes belonging to 3289303
[2025-06-05 23:38:52] 2025-06-06 03:38:33,977 | INFO     | did not find any defunct processes belonging to 3289303
[2025-06-05 23:38:52] 2025-06-06 03:38:33,977 | INFO     | ready for new job
[2025-06-05 23:38:52] 2025-06-06 03:38:33,978 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 23:38:52] 2025-06-06 03:38:33,980 | INFO     | **************************************
[2025-06-05 23:38:52] 2025-06-06 03:38:33,980 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 23:38:52] 2025-06-06 03:38:33,980 | INFO     | **************************************
[2025-06-05 23:38:52] 2025-06-06 03:38:33,980 | INFO     | 
[2025-06-05 23:38:52] 2025-06-06 03:38:33,993 | INFO     | architecture information:
[2025-06-05 23:38:52] 2025-06-06 03:38:33,994 | INFO     | executing command: cat /etc/os-release
[2025-06-05 23:38:52] 2025-06-06 03:38:34,009 | INFO     | cat /etc/os-release:
[2025-06-05 23:38:52] NAME="CentOS Linux"
[2025-06-05 23:38:52] VERSION="7 (Core)"
[2025-06-05 23:38:52] ID="centos"
[2025-06-05 23:38:52] ID_LIKE="rhel fedora"
[2025-06-05 23:38:52] VERSION_ID="7"
[2025-06-05 23:38:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 23:38:52] ANSI_COLOR="0;31"
[2025-06-05 23:38:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 23:38:52] HOME_URL="https://www.centos.org/"
[2025-06-05 23:38:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 23:38:52] 
[2025-06-05 23:38:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 23:38:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 23:38:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 23:38:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 23:38:52] 
[2025-06-05 23:38:52] 2025-06-06 03:38:34,009 | INFO     | **************************************
[2025-06-05 23:38:52] 2025-06-06 03:38:34,512 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 23:38:52] 2025-06-06 03:38:34,529 | INFO     | sufficient remaining disk space (96662978560 B)
[2025-06-05 23:38:52] 2025-06-06 03:38:34,529 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 23:38:52] 2025-06-06 03:38:34,529 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 23:38:52] 2025-06-06 03:38:34,530 | INFO     | update_server=False
[2025-06-05 23:38:52] 2025-06-06 03:38:34,530 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 23:38:52] 2025-06-06 03:38:34,530 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 23:38:52] 2025-06-06 03:38:34,530 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 23:38:52] 2025-06-06 03:38:34,530 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 23:38:52] 2025-06-06 03:38:34,531 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 23:38:52] 2025-06-06 03:38:34,531 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 23:38:52] 2025-06-06 03:38:34,532 | INFO     | aborting loop
[2025-06-05 23:38:52] 2025-06-06 03:38:34,532 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 23:38:52] 2025-06-06 03:38:34,532 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 23:38:52] 2025-06-06 03:38:34,558 | INFO     | all data control threads have been joined
[2025-06-05 23:38:52] 2025-06-06 03:38:34,828 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 23:38:52] 2025-06-06 03:38:35,535 | INFO     | [job] retrieve thread has finished
[2025-06-05 23:38:52] 2025-06-06 03:38:35,536 | INFO     | [job] queue monitor thread has finished
[2025-06-05 23:38:52] 2025-06-06 03:38:35,537 | INFO     | [job] job monitor thread has finished
[2025-06-05 23:38:52] 2025-06-06 03:38:35,563 | INFO     | [data] control thread has finished
[2025-06-05 23:38:52] 2025-06-06 03:38:35,675 | INFO     | all job control threads have been joined
[2025-06-05 23:38:52] 2025-06-06 03:38:35,771 | INFO     | all payload control threads have been joined
[2025-06-05 23:38:52] 2025-06-06 03:38:35,783 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 23:38:52] 2025-06-06 03:38:35,796 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 23:38:52] 2025-06-06 03:38:35,820 | INFO     | [data] copytool_in thread has finished
[2025-06-05 23:38:52] 2025-06-06 03:38:36,238 | INFO     | [job] validate thread has finished
[2025-06-05 23:38:52] 2025-06-06 03:38:36,525 | INFO     | [payload] validate_post thread has finished
[2025-06-05 23:38:52] 2025-06-06 03:38:36,537 | INFO     | [data] copytool_out thread has finished
[2025-06-05 23:38:52] 2025-06-06 03:38:36,680 | INFO     | [job] control thread has finished
[2025-06-05 23:38:52] 2025-06-06 03:38:36,739 | INFO     | [payload] failed_post thread has finished
[2025-06-05 23:38:52] 2025-06-06 03:38:36,776 | INFO     | [payload] control thread has finished
[2025-06-05 23:38:52] 2025-06-06 03:38:37,033 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 23:38:52] 2025-06-06 03:38:38,834 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 23:38:52] 2025-06-06 03:38:44,758 | INFO     | job.realtimelogging is not enabled
[2025-06-05 23:38:52] 2025-06-06 03:38:45,763 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 23:38:52] 2025-06-06 03:38:47,015 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140273652610880)>', '<ExcThread(monitor, started 140273002727168)>']
[2025-06-05 23:38:52] 2025-06-06 03:38:47,595 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 23:38:52] 2025-06-06 03:38:47,595 | INFO     | [monitor] control thread has ended
[2025-06-05 23:38:52] 2025-06-06 03:38:52,040 | INFO     | all workflow threads have been joined
[2025-06-05 23:38:52] 2025-06-06 03:38:52,040 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 23:38:52] 2025-06-06 03:38:52,040 | INFO     | traces error code: 0
[2025-06-05 23:38:52] 2025-06-06 03:38:52,041 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 23:38:52] 2025-06-06 03:38:52,216 [wrapper] ==== pilot stdout END ====
[2025-06-05 23:38:52] 2025-06-06 03:38:52,219 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 23:38:52] 2025-06-06 03:38:52,224 [wrapper] pilotpid: 3282164
[2025-06-05 23:38:52] 2025-06-06 03:38:52,227 [wrapper] Pilot exit status: 0
[2025-06-05 23:38:52] 2025-06-06 03:38:52,239 [wrapper] pandaids: 6668730720
[2025-06-05 23:38:52] 2025-06-06 03:38:52,301 [wrapper] cleanup supervisor_pilot 3902487 3282165
[2025-06-05 23:38:52] 2025-06-06 03:38:52,305 [wrapper] Test setup, not cleaning
[2025-06-05 23:38:52] 2025-06-06 03:38:52,307 [wrapper] apfmon messages muted
[2025-06-05 23:38:52] 2025-06-06 03:38:52,310 [wrapper] ==== wrapper stdout END ====
[2025-06-05 23:38:52] 2025-06-06 03:38:52,312 [wrapper] ==== wrapper stderr END ====
[2025-06-05 23:38:52]  *** Error codes and diagnostics ***
[2025-06-05 23:38:52]     "exeErrorCode": 0,
[2025-06-05 23:38:52]     "exeErrorDiag": "",
[2025-06-05 23:38:52]     "pilotErrorCode": 0,
[2025-06-05 23:38:52]     "pilotErrorDiag": "",
[2025-06-05 23:38:52]  *** Listing of results directory ***
[2025-06-05 23:38:52] total 421340
[2025-06-05 23:38:52] -rw-r--r--. 1 boincer umatlas    495897 May 28 13:58 pilot3.tar.gz
[2025-06-05 23:38:52] -rw-r--r--. 1 boincer umatlas      5111 May 28 14:01 queuedata.json
[2025-06-05 23:38:52] -rwx------. 1 boincer umatlas     37140 May 28 14:02 runpilot2-wrapper.sh
[2025-06-05 23:38:52] -rw-r--r--. 1 boincer umatlas       100 Jun  5 20:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 23:38:52] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 20:16 run_atlas
[2025-06-05 23:38:52] -rw-r--r--. 1 boincer umatlas       105 Jun  5 20:16 job.xml
[2025-06-05 23:38:52] -rw-r--r--. 2 boincer umatlas 225155659 Jun  5 20:16 EVNT.44871834._003436.pool.root.1
[2025-06-05 23:38:52] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 20:16 start_atlas.sh
[2025-06-05 23:38:52] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 20:16 shared
[2025-06-05 23:38:52] -rw-r--r--. 2 boincer umatlas    508877 Jun  5 20:16 input.tar.gz
[2025-06-05 23:38:52] -rw-r--r--. 1 boincer umatlas         0 Jun  5 20:16 boinc_lockfile
[2025-06-05 23:38:52] -rw-r--r--. 1 boincer umatlas      2558 Jun  5 20:16 pandaJob.out
[2025-06-05 23:38:52] -rw-------. 1 boincer umatlas    987721 Jun  5 20:17 agis_schedconf.cvmfs.json
[2025-06-05 23:38:52] drwx------. 4 boincer umatlas      4096 Jun  5 20:17 pilot3
[2025-06-05 23:38:52] -rw-------. 1 boincer umatlas        95 Jun  5 23:37 pilot_heartbeat.json
[2025-06-05 23:38:52] -rw-r--r--. 1 boincer umatlas       531 Jun  5 23:37 boinc_task_state.xml
[2025-06-05 23:38:52] -rw-------. 1 boincer umatlas 199429208 Jun  5 23:37 HITS.44871837._088268.pool.root.1
[2025-06-05 23:38:52] -rw-r--r--. 1 boincer umatlas      6659 Jun  5 23:38 init_data.xml
[2025-06-05 23:38:52] -rw-------. 1 boincer umatlas      1044 Jun  5 23:38 memory_monitor_summary.json
[2025-06-05 23:38:52] -rw-------. 1 boincer umatlas   1598969 Jun  5 23:38 agis_ddmendpoints.agis.ALL.json
[2025-06-05 23:38:52] -rw-------. 1 boincer umatlas    424696 Jun  5 23:38 log.44871837._088268.job.log.tgz.1
[2025-06-05 23:38:52] -rw-------. 1 boincer umatlas      7720 Jun  5 23:38 heartbeat.json
[2025-06-05 23:38:52] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 23:38 boinc_mmap_file
[2025-06-05 23:38:52] -rw-r--r--. 1 boincer umatlas        28 Jun  5 23:38 wrapper_checkpoint.txt
[2025-06-05 23:38:52] -rw-------. 1 boincer umatlas      4548 Jun  5 23:38 pilotlog.txt
[2025-06-05 23:38:52] -rw-------. 1 boincer umatlas   1093301 Jun  5 23:38 log.44871837._088268.job.log.1
[2025-06-05 23:38:52] -rw-------. 1 boincer umatlas       357 Jun  5 23:38 output.list
[2025-06-05 23:38:52] -rw-r--r--. 1 boincer umatlas       620 Jun  5 23:38 runtime_log
[2025-06-05 23:38:52] -rw-------. 1 boincer umatlas   1536000 Jun  5 23:38 result.tar.gz
[2025-06-05 23:38:52] -rw-------. 1 boincer umatlas       654 Jun  5 23:38 UEkKDmrHae7n9Rq4apOajLDm4fhM0noT9bVof3QYDmJuTKDmTJICJm.diag
[2025-06-05 23:38:52] -rw-r--r--. 1 boincer umatlas      8652 Jun  5 23:38 runtime_log.err
[2025-06-05 23:38:52] -rw-r--r--. 1 boincer umatlas     21252 Jun  5 23:38 stderr.txt
[2025-06-05 23:38:52] HITS file was successfully produced:
[2025-06-05 23:38:52] -rw-------. 1 boincer umatlas 199429208 Jun  5 23:37 shared/HITS.pool.root.1
[2025-06-05 23:38:52]  *** Contents of shared directory: ***
[2025-06-05 23:38:52] total 416660
[2025-06-05 23:38:52] -rw-r--r--. 2 boincer umatlas 225155659 Jun  5 20:16 ATLAS.root_0
[2025-06-05 23:38:52] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 20:16 start_atlas.sh
[2025-06-05 23:38:52] -rw-r--r--. 2 boincer umatlas    508877 Jun  5 20:16 input.tar.gz
[2025-06-05 23:38:52] -rw-------. 1 boincer umatlas 199429208 Jun  5 23:37 HITS.pool.root.1
[2025-06-05 23:38:52] -rw-------. 1 boincer umatlas   1536000 Jun  5 23:38 result.tar.gz
23:38:54 (3278603): run_atlas exited; CPU time 62754.944658
23:38:54 (3278603): called boinc_finish(0)

</stderr_txt>
]]>

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