Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
11:12:57 (2074721): wrapper (7.7.26015): starting
11:12:57 (2074721): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 11:12:57] Arguments: --nthreads 12
[2025-06-06 11:12:57] Threads: 12
[2025-06-06 11:12:57] Checking for CVMFS
[2025-06-06 11:12:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 11:12:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 11:12:57] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 11:12:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 11:12:57] 2.12.7.0 600724 5287 60360 146847 2 187 2393844 4096000 0 130560 0 4094060 99.991 1165787 214 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-06-06 11:12:57] CVMFS is ok
[2025-06-06 11:12:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 11:12:57] Checking for apptainer binary...
[2025-06-06 11:12:57] apptainer is not installed, using version from CVMFS
[2025-06-06 11:12:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 11:12:58] lithium
[2025-06-06 11:12:58] apptainer works
[2025-06-06 11:12:58] Set ATHENA_PROC_NUMBER=12
[2025-06-06 11:12:58] Set ATHENA_CORE_NUMBER=12
[2025-06-06 11:12:58] Starting ATLAS job with PandaID=6669623690
[2025-06-06 11:12:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 13:35:22]  *** The last 200 lines of the pilot log: ***
[2025-06-06 13:35:22] 2025-06-06 11:35:03,563 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6669623690/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 13:35:22] 2025-06-06 11:35:03,564 | INFO     | extracted standard info from prmon json
[2025-06-06 13:35:22] 2025-06-06 11:35:03,564 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 13:35:22] 2025-06-06 11:35:03,565 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 13:35:22] 2025-06-06 11:35:03,566 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 13:35:22] 2025-06-06 11:35:03,566 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 13:35:22] 2025-06-06 11:35:03,569 | INFO     | fitting pss+swap vs Time
[2025-06-06 13:35:22] 2025-06-06 11:35:03,569 | INFO     | sum of square deviations: 814878534.5
[2025-06-06 13:35:22] 2025-06-06 11:35:03,570 | INFO     | sum of deviations: -23782936749.0
[2025-06-06 13:35:22] 2025-06-06 11:35:03,570 | INFO     | mean x: 1749205386.5
[2025-06-06 13:35:22] 2025-06-06 11:35:03,570 | INFO     | mean y: 2860546.579710145
[2025-06-06 13:35:22] 2025-06-06 11:35:03,570 | INFO     | -- intersect: 51054936784.74647
[2025-06-06 13:35:22] 2025-06-06 11:35:03,570 | INFO     | intersect: 51054936784.74647
[2025-06-06 13:35:22] 2025-06-06 11:35:03,570 | INFO     | chi2: 1.8251529893685048
[2025-06-06 13:35:22] 2025-06-06 11:35:03,571 | INFO     | sum of square deviations: 729472282.0
[2025-06-06 13:35:22] 2025-06-06 11:35:03,571 | INFO     | sum of deviations: -21160107243.999996
[2025-06-06 13:35:22] 2025-06-06 11:35:03,571 | INFO     | mean x: 1749205234.0
[2025-06-06 13:35:22] 2025-06-06 11:35:03,571 | INFO     | mean y: 2865231.902255639
[2025-06-06 13:35:22] 2025-06-06 11:35:03,572 | INFO     | -- intersect: 50742792240.13107
[2025-06-06 13:35:22] 2025-06-06 11:35:03,572 | INFO     | intersect: 50742792240.13107
[2025-06-06 13:35:22] 2025-06-06 11:35:03,572 | INFO     | chi2: 1.8256282302978537
[2025-06-06 13:35:22] 2025-06-06 11:35:03,572 | INFO     | current chi2=1.8256282302978537 (change=-0.026038416073457513 %)
[2025-06-06 13:35:22] 2025-06-06 11:35:03,572 | INFO     | right removable region: 132
[2025-06-06 13:35:22] 2025-06-06 11:35:03,572 | INFO     | sum of square deviations: 729472282.0
[2025-06-06 13:35:22] 2025-06-06 11:35:03,573 | INFO     | sum of deviations: -47976511101.99999
[2025-06-06 13:35:22] 2025-06-06 11:35:03,573 | INFO     | mean x: 1749205539.0
[2025-06-06 13:35:22] 2025-06-06 11:35:03,573 | INFO     | mean y: 2903088.5338345864
[2025-06-06 13:35:22] 2025-06-06 11:35:03,573 | INFO     | -- intersect: 115046039109.31189
[2025-06-06 13:35:22] 2025-06-06 11:35:03,574 | INFO     | intersect: 115046039109.31189
[2025-06-06 13:35:22] 2025-06-06 11:35:03,574 | INFO     | chi2: 0.26447345696958574
[2025-06-06 13:35:22] 2025-06-06 11:35:03,574 | INFO     | current chi2=0.26447345696958574 (change=85.50951846173221 %)
[2025-06-06 13:35:22] 2025-06-06 11:35:03,574 | INFO     | sum of square deviations: 650252192.0
[2025-06-06 13:35:22] 2025-06-06 11:35:03,575 | INFO     | sum of deviations: -48780426869.0
[2025-06-06 13:35:22] 2025-06-06 11:35:03,575 | INFO     | mean x: 1749205691.5
[2025-06-06 13:35:22] 2025-06-06 11:35:03,575 | INFO     | mean y: 2904472.171875
[2025-06-06 13:35:22] 2025-06-06 11:35:03,575 | INFO     | -- intersect: 131224300359.52986
[2025-06-06 13:35:22] 2025-06-06 11:35:03,575 | INFO     | intersect: 131224300359.52986
[2025-06-06 13:35:22] 2025-06-06 11:35:03,576 | INFO     | chi2: 0.1885148757473743
[2025-06-06 13:35:22] 2025-06-06 11:35:03,576 | INFO     | current chi2=0.1885148757473743 (change=28.720682253927137 %)
[2025-06-06 13:35:22] 2025-06-06 11:35:03,576 | INFO     | sum of square deviations: 576985702.0
[2025-06-06 13:35:22] 2025-06-06 11:35:03,577 | INFO     | sum of deviations: -44998941648.0
[2025-06-06 13:35:22] 2025-06-06 11:35:03,577 | INFO     | mean x: 1749205844.0
[2025-06-06 13:35:22] 2025-06-06 11:35:03,577 | INFO     | mean y: 2896590.6422764226
[2025-06-06 13:35:22] 2025-06-06 11:35:03,577 | INFO     | -- intersect: 136422935131.73006
[2025-06-06 13:35:22] 2025-06-06 11:35:03,577 | INFO     | intersect: 136422935131.73006
[2025-06-06 13:35:22] 2025-06-06 11:35:03,577 | INFO     | chi2: 0.1842787925715507
[2025-06-06 13:35:22] 2025-06-06 11:35:03,578 | INFO     | current chi2=0.1842787925715507 (change=2.247081647551418 %)
[2025-06-06 13:35:22] 2025-06-06 11:35:03,578 | INFO     | left removable region: 30
[2025-06-06 13:35:22] 2025-06-06 11:35:03,578 | INFO     | sum of square deviations: 329031285.5
[2025-06-06 13:35:22] 2025-06-06 11:35:03,578 | INFO     | sum of deviations: -29628805258.99998
[2025-06-06 13:35:22] 2025-06-06 11:35:03,579 | INFO     | mean x: 1749206118.5
[2025-06-06 13:35:22] 2025-06-06 11:35:03,579 | INFO     | mean y: 2872477.725490196
[2025-06-06 13:35:22] 2025-06-06 11:35:03,579 | INFO     | -- intersect: 157516427348.7493
[2025-06-06 13:35:22] 2025-06-06 11:35:03,579 | INFO     | intersect: 157516427348.7493
[2025-06-06 13:35:22] 2025-06-06 11:35:03,579 | INFO     | chi2: 0.16717817354669423
[2025-06-06 13:35:22] 2025-06-06 11:35:03,579 | INFO     | -- intersect: 157516427348.7493
[2025-06-06 13:35:22] 2025-06-06 11:35:03,580 | INFO     | current memory leak: -90.05 B/s (using 102 data points, chi2=0.17)
[2025-06-06 13:35:22] 2025-06-06 11:35:03,580 | INFO     | ..............................
[2025-06-06 13:35:22] 2025-06-06 11:35:03,580 | INFO     | . Timing measurements:
[2025-06-06 13:35:22] 2025-06-06 11:35:03,580 | INFO     | . get job = 0 s
[2025-06-06 13:35:22] 2025-06-06 11:35:03,580 | INFO     | . initial setup = 1 s
[2025-06-06 13:35:22] 2025-06-06 11:35:03,581 | INFO     | . payload setup = 5 s
[2025-06-06 13:35:22] 2025-06-06 11:35:03,581 | INFO     | . stage-in = 0 s
[2025-06-06 13:35:22] 2025-06-06 11:35:03,581 | INFO     | . payload execution = 8411 s
[2025-06-06 13:35:22] 2025-06-06 11:35:03,581 | INFO     | . stage-out = 0 s
[2025-06-06 13:35:22] 2025-06-06 11:35:03,581 | INFO     | . log creation = 0 s
[2025-06-06 13:35:22] 2025-06-06 11:35:03,581 | INFO     | ..............................
[2025-06-06 13:35:22] 2025-06-06 11:35:04,109 | INFO     | 
[2025-06-06 13:35:22] 2025-06-06 11:35:04,109 | INFO     | job summary report
[2025-06-06 13:35:22] 2025-06-06 11:35:04,109 | INFO     | --------------------------------------------------
[2025-06-06 13:35:22] 2025-06-06 11:35:04,110 | INFO     | PanDA job id: 6669623690
[2025-06-06 13:35:22] 2025-06-06 11:35:04,110 | INFO     | task id: 44871837
[2025-06-06 13:35:22] 2025-06-06 11:35:04,110 | INFO     | errors: (none)
[2025-06-06 13:35:22] 2025-06-06 11:35:04,110 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 13:35:22] 2025-06-06 11:35:04,110 | INFO     | pilot state: finished 
[2025-06-06 13:35:22] 2025-06-06 11:35:04,110 | INFO     | transexitcode: 0
[2025-06-06 13:35:22] 2025-06-06 11:35:04,110 | INFO     | exeerrorcode: 0
[2025-06-06 13:35:22] 2025-06-06 11:35:04,110 | INFO     | exeerrordiag: 
[2025-06-06 13:35:22] 2025-06-06 11:35:04,111 | INFO     | exitcode: 0
[2025-06-06 13:35:22] 2025-06-06 11:35:04,111 | INFO     | exitmsg: OK
[2025-06-06 13:35:22] 2025-06-06 11:35:04,111 | INFO     | cpuconsumptiontime: 87424 s
[2025-06-06 13:35:22] 2025-06-06 11:35:04,111 | INFO     | nevents: 400
[2025-06-06 13:35:22] 2025-06-06 11:35:04,111 | INFO     | neventsw: 0
[2025-06-06 13:35:22] 2025-06-06 11:35:04,111 | INFO     | pid: 2085100
[2025-06-06 13:35:22] 2025-06-06 11:35:04,111 | INFO     | pgrp: 2085100
[2025-06-06 13:35:22] 2025-06-06 11:35:04,111 | INFO     | corecount: 12
[2025-06-06 13:35:22] 2025-06-06 11:35:04,111 | INFO     | event service: False
[2025-06-06 13:35:22] 2025-06-06 11:35:04,112 | INFO     | sizes: {0: 2397285, 1: 2397427, 4: 2397633, 11: 2397661, 8423: 2425396, 8425: 2434351, 8426: 2434535, 8504: 2434705}
[2025-06-06 13:35:22] 2025-06-06 11:35:04,112 | INFO     | --------------------------------------------------
[2025-06-06 13:35:22] 2025-06-06 11:35:04,112 | INFO     | 
[2025-06-06 13:35:22] 2025-06-06 11:35:04,112 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-06-06 13:35:22] 2025-06-06 11:35:04,127 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 13:35:22] 2025-06-06 11:35:04,128 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 13:35:22] 2025-06-06 11:35:04,128 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 13:35:22] 2025-06-06 11:35:04,128 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 13:35:22] 2025-06-06 11:35:04,128 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 13:35:22] 2025-06-06 11:35:04,128 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 13:35:22] 2025-06-06 11:35:04,128 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 13:35:22] 2025-06-06 11:35:04,128 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 13:35:22] 2025-06-06 11:35:04,129 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 13:35:22] 2025-06-06 11:35:04,129 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 13:35:22] 2025-06-06 11:35:04,129 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 13:35:22] 2025-06-06 11:35:04,129 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 13:35:22] 2025-06-06 11:35:04,129 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 13:35:22] 2025-06-06 11:35:04,129 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 13:35:22] 2025-06-06 11:35:04,129 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 13:35:22] 2025-06-06 11:35:04,130 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 13:35:22] 2025-06-06 11:35:04,130 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 13:35:22] 2025-06-06 11:35:04,130 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 13:35:22] 2025-06-06 11:35:04,130 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 13:35:22] 2025-06-06 11:35:04,130 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 13:35:22] 2025-06-06 11:35:04,130 | INFO     | job 6669623690 has completed (purged errors)
[2025-06-06 13:35:22] 2025-06-06 11:35:04,131 | INFO     | overall cleanup function is called
[2025-06-06 13:35:22] 2025-06-06 11:35:05,137 | INFO     | --- collectZombieJob: --- 10, [2085100]
[2025-06-06 13:35:22] 2025-06-06 11:35:05,137 | INFO     | zombie collector waiting for pid 2085100
[2025-06-06 13:35:22] 2025-06-06 11:35:05,139 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 13:35:22] 2025-06-06 11:35:05,139 | INFO     | collected zombie processes
[2025-06-06 13:35:22] 2025-06-06 11:35:05,139 | INFO     | will attempt to kill all subprocesses of pid=2085100
[2025-06-06 13:35:22] 2025-06-06 11:35:05,237 | INFO     | process IDs to be killed: [2085100] (in reverse order)
[2025-06-06 13:35:22] 2025-06-06 11:35:05,282 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 13:35:22] 2025-06-06 11:35:05,283 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 13:35:22] 2025-06-06 11:35:05,287 | INFO     | did not find any defunct processes belonging to 2085100
[2025-06-06 13:35:22] 2025-06-06 11:35:05,290 | INFO     | did not find any defunct processes belonging to 2085100
[2025-06-06 13:35:22] 2025-06-06 11:35:05,291 | INFO     | ready for new job
[2025-06-06 13:35:22] 2025-06-06 11:35:05,291 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 13:35:22] 2025-06-06 11:35:05,293 | INFO     | **************************************
[2025-06-06 13:35:22] 2025-06-06 11:35:05,293 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 13:35:22] 2025-06-06 11:35:05,293 | INFO     | **************************************
[2025-06-06 13:35:22] 2025-06-06 11:35:05,293 | INFO     | 
[2025-06-06 13:35:22] 2025-06-06 11:35:05,314 | INFO     | architecture information:
[2025-06-06 13:35:22] 2025-06-06 11:35:05,315 | INFO     | executing command: cat /etc/os-release
[2025-06-06 13:35:22] 2025-06-06 11:35:05,326 | INFO     | cat /etc/os-release:
[2025-06-06 13:35:22] NAME="CentOS Linux"
[2025-06-06 13:35:22] VERSION="7 (Core)"
[2025-06-06 13:35:22] ID="centos"
[2025-06-06 13:35:22] ID_LIKE="rhel fedora"
[2025-06-06 13:35:22] VERSION_ID="7"
[2025-06-06 13:35:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 13:35:22] ANSI_COLOR="0;31"
[2025-06-06 13:35:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 13:35:22] HOME_URL="https://www.centos.org/"
[2025-06-06 13:35:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 13:35:22] 
[2025-06-06 13:35:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 13:35:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 13:35:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 13:35:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 13:35:22] 
[2025-06-06 13:35:22] 2025-06-06 11:35:05,326 | INFO     | **************************************
[2025-06-06 13:35:22] 2025-06-06 11:35:05,829 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-06-06 13:35:22] 2025-06-06 11:35:05,843 | INFO     | sufficient remaining disk space (37412143104 B)
[2025-06-06 13:35:22] 2025-06-06 11:35:05,843 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 13:35:22] 2025-06-06 11:35:05,844 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 13:35:22] 2025-06-06 11:35:05,844 | INFO     | update_server=False
[2025-06-06 13:35:22] 2025-06-06 11:35:05,844 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 13:35:22] 2025-06-06 11:35:05,844 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 13:35:22] 2025-06-06 11:35:05,845 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 13:35:22] 2025-06-06 11:35:05,845 | INFO     | aborting loop
[2025-06-06 13:35:22] 2025-06-06 11:35:06,161 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 13:35:22] 2025-06-06 11:35:06,162 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 13:35:22] 2025-06-06 11:35:06,162 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 13:35:22] 2025-06-06 11:35:06,269 | INFO     | all data control threads have been joined
[2025-06-06 13:35:22] 2025-06-06 11:35:06,849 | INFO     | [job] retrieve thread has finished
[2025-06-06 13:35:22] 2025-06-06 11:35:06,850 | INFO     | [job] job monitor thread has finished
[2025-06-06 13:35:22] 2025-06-06 11:35:06,933 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 13:35:22] 2025-06-06 11:35:06,969 | INFO     | all payload control threads have been joined
[2025-06-06 13:35:22] 2025-06-06 11:35:06,981 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 13:35:22] 2025-06-06 11:35:07,028 | INFO     | all job control threads have been joined
[2025-06-06 13:35:22] 2025-06-06 11:35:07,113 | INFO     | [payload] validate_post thread has finished
[2025-06-06 13:35:22] 2025-06-06 11:35:07,273 | INFO     | [data] control thread has finished
[2025-06-06 13:35:22] 2025-06-06 11:35:07,669 | INFO     | [data] copytool_in thread has finished
[2025-06-06 13:35:22] 2025-06-06 11:35:07,817 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 13:35:22] 2025-06-06 11:35:07,849 | INFO     | [data] copytool_out thread has finished
[2025-06-06 13:35:22] 2025-06-06 11:35:07,897 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 13:35:22] 2025-06-06 11:35:07,973 | INFO     | [payload] control thread has finished
[2025-06-06 13:35:22] 2025-06-06 11:35:08,033 | INFO     | [job] control thread has finished
[2025-06-06 13:35:22] 2025-06-06 11:35:08,185 | INFO     | [job] validate thread has finished
[2025-06-06 13:35:22] 2025-06-06 11:35:08,305 | INFO     | [payload] failed_post thread has finished
[2025-06-06 13:35:22] 2025-06-06 11:35:08,693 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 13:35:22] 2025-06-06 11:35:09,697 | INFO     | [job] queue monitor thread has finished
[2025-06-06 13:35:22] 2025-06-06 11:35:11,901 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 13:35:22] 2025-06-06 11:35:15,913 | INFO     | job.realtimelogging is not enabled
[2025-06-06 13:35:22] 2025-06-06 11:35:16,917 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 13:35:22] 2025-06-06 11:35:17,493 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140044358653760)>', '<ExcThread(monitor, started 140043599451904)>']
[2025-06-06 13:35:22] 2025-06-06 11:35:18,209 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 13:35:22] 2025-06-06 11:35:18,209 | INFO     | [monitor] control thread has ended
[2025-06-06 13:35:22] 2025-06-06 11:35:22,517 | INFO     | all workflow threads have been joined
[2025-06-06 13:35:22] 2025-06-06 11:35:22,517 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 13:35:22] 2025-06-06 11:35:22,518 | INFO     | traces error code: 0
[2025-06-06 13:35:22] 2025-06-06 11:35:22,518 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 13:35:22] 2025-06-06 11:35:22,628 [wrapper] ==== pilot stdout END ====
[2025-06-06 13:35:22] 2025-06-06 11:35:22,631 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 13:35:22] 2025-06-06 11:35:22,633 [wrapper] pilotpid: 2078443
[2025-06-06 13:35:22] 2025-06-06 11:35:22,635 [wrapper] Pilot exit status: 0
[2025-06-06 13:35:22] 2025-06-06 11:35:22,643 [wrapper] pandaids: 6669623690
[2025-06-06 13:35:22] 2025-06-06 11:35:22,668 [wrapper] cleanup supervisor_pilot 2102040 2078444
[2025-06-06 13:35:22] 2025-06-06 11:35:22,670 [wrapper] Test setup, not cleaning
[2025-06-06 13:35:22] 2025-06-06 11:35:22,672 [wrapper] apfmon messages muted
[2025-06-06 13:35:22] 2025-06-06 11:35:22,674 [wrapper] ==== wrapper stdout END ====
[2025-06-06 13:35:22] 2025-06-06 11:35:22,676 [wrapper] ==== wrapper stderr END ====
[2025-06-06 13:35:22]  *** Error codes and diagnostics ***
[2025-06-06 13:35:22]     "exeErrorCode": 0,
[2025-06-06 13:35:22]     "exeErrorDiag": "",
[2025-06-06 13:35:22]     "pilotErrorCode": 0,
[2025-06-06 13:35:22]     "pilotErrorDiag": "",
[2025-06-06 13:35:22]  *** Listing of results directory ***
[2025-06-06 13:35:22] total 419236
[2025-06-06 13:35:22] -rw-r--r-- 1 boinc boinc    495897 Mai 29 10:50 pilot3.tar.gz
[2025-06-06 13:35:22] -rwx------ 1 boinc boinc     37140 Mai 29 10:59 runpilot2-wrapper.sh
[2025-06-06 13:35:22] -rw-r--r-- 1 boinc boinc      5111 Mai 29 10:59 queuedata.json
[2025-06-06 13:35:22] -rw-r--r-- 1 boinc boinc       100 Jun  6 11:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 13:35:22] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 11:12 run_atlas
[2025-06-06 13:35:22] -rw-r--r-- 1 boinc boinc       105 Jun  6 11:12 job.xml
[2025-06-06 13:35:22] -rw-r--r-- 2 boinc boinc     15093 Jun  6 11:12 start_atlas.sh
[2025-06-06 13:35:22] drwxrwx--x 2 boinc boinc      4096 Jun  6 11:12 shared
[2025-06-06 13:35:22] -rw-r--r-- 2 boinc boinc    508878 Jun  6 11:12 input.tar.gz
[2025-06-06 13:35:22] -rw-r--r-- 1 boinc boinc      6048 Jun  6 11:12 init_data.xml
[2025-06-06 13:35:22] -rw-r--r-- 2 boinc boinc 224095671 Jun  6 11:12 EVNT.44871834._003722.pool.root.1
[2025-06-06 13:35:22] -rw-r--r-- 1 boinc boinc         0 Jun  6 11:12 boinc_lockfile
[2025-06-06 13:35:22] -rw-r--r-- 1 boinc boinc      2559 Jun  6 11:12 pandaJob.out
[2025-06-06 13:35:22] -rw------- 1 boinc boinc    987967 Jun  6 11:13 agis_schedconf.cvmfs.json
[2025-06-06 13:35:22] -rw------- 1 boinc boinc   1598969 Jun  6 11:13 agis_ddmendpoints.agis.ALL.json
[2025-06-06 13:35:22] drwx------ 4 boinc boinc      4096 Jun  6 11:13 pilot3
[2025-06-06 13:35:22] -rw------- 1 boinc boinc 199041872 Jun  6 13:33 HITS.44871837._097912.pool.root.1
[2025-06-06 13:35:22] -rw-r--r-- 1 boinc boinc       529 Jun  6 13:33 boinc_task_state.xml
[2025-06-06 13:35:22] -rw------- 1 boinc boinc      1071 Jun  6 13:33 memory_monitor_summary.json
[2025-06-06 13:35:22] -rw------- 1 boinc boinc    397978 Jun  6 13:33 log.44871837._097912.job.log.tgz.1
[2025-06-06 13:35:22] -rw------- 1 boinc boinc        95 Jun  6 13:34 pilot_heartbeat.json
[2025-06-06 13:35:22] -rw------- 1 boinc boinc      7745 Jun  6 13:35 heartbeat.json
[2025-06-06 13:35:22] -rw-r--r-- 1 boinc boinc      8192 Jun  6 13:35 boinc_mmap_file
[2025-06-06 13:35:22] -rw-r--r-- 1 boinc boinc        27 Jun  6 13:35 wrapper_checkpoint.txt
[2025-06-06 13:35:22] -rw------- 1 boinc boinc      4432 Jun  6 13:35 pilotlog.txt
[2025-06-06 13:35:22] -rw------- 1 boinc boinc    764006 Jun  6 13:35 log.44871837._097912.job.log.1
[2025-06-06 13:35:22] -rw------- 1 boinc boinc       357 Jun  6 13:35 output.list
[2025-06-06 13:35:22] -rw-r--r-- 1 boinc boinc       620 Jun  6 13:35 runtime_log
[2025-06-06 13:35:22] -rw------- 1 boinc boinc   1177600 Jun  6 13:35 result.tar.gz
[2025-06-06 13:35:22] -rw------- 1 boinc boinc       656 Jun  6 13:35 VcCODmaHoe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmcxUKDmPJD2Ho.diag
[2025-06-06 13:35:22] -rw-r--r-- 1 boinc boinc      8716 Jun  6 13:35 runtime_log.err
[2025-06-06 13:35:22] -rw-r--r-- 1 boinc boinc     20536 Jun  6 13:35 stderr.txt
[2025-06-06 13:35:22] HITS file was successfully produced:
[2025-06-06 13:35:22] -rw------- 1 boinc boinc 199041872 Jun  6 13:33 shared/HITS.pool.root.1
[2025-06-06 13:35:22]  *** Contents of shared directory: ***
[2025-06-06 13:35:22] total 414900
[2025-06-06 13:35:22] -rw-r--r-- 2 boinc boinc     15093 Jun  6 11:12 start_atlas.sh
[2025-06-06 13:35:22] -rw-r--r-- 2 boinc boinc    508878 Jun  6 11:12 input.tar.gz
[2025-06-06 13:35:22] -rw-r--r-- 2 boinc boinc 224095671 Jun  6 11:12 ATLAS.root_0
[2025-06-06 13:35:22] -rw------- 1 boinc boinc 199041872 Jun  6 13:33 HITS.pool.root.1
[2025-06-06 13:35:22] -rw------- 1 boinc boinc   1177600 Jun  6 13:35 result.tar.gz
13:35:24 (2074721): run_atlas exited; CPU time 85399.244046
13:35:24 (2074721): called boinc_finish(0)

</stderr_txt>
]]>

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