Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:01:17 (1975717): wrapper (7.7.26015): starting
20:01:17 (1975717): wrapper: running run_atlas (--nthreads 10)
[2025-06-05 20:01:17] Arguments: --nthreads 10
[2025-06-05 20:01:17] Threads: 10
[2025-06-05 20:01:17] Checking for CVMFS
[2025-06-05 20:01:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 20:01:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 20:01:17] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 20:01:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 20:01:18] 2.12.6.0 5977 3437 264176 146836 3 340 17922294 32935936 28759 16776704 0 24129691 99.656 20741492 22827 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 20:01:18] CVMFS is ok
[2025-06-05 20:01:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 20:01:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 20:01:18] Further information can be found at the LHC@home message board.
[2025-06-05 20:01:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 20:01:18] Checking for apptainer binary...
[2025-06-05 20:01:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 20:01:18] Running /usr/bin/apptainer --version
[2025-06-05 20:01:18] apptainer version 1.4.1-1.el9
[2025-06-05 20:01:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 20:01:18] c-1-3.aglt2.org
[2025-06-05 20:01:18] apptainer works
[2025-06-05 20:01:18] Set ATHENA_PROC_NUMBER=10
[2025-06-05 20:01:18] Set ATHENA_CORE_NUMBER=10
[2025-06-05 20:01:18] Starting ATLAS job with PandaID=6678362533
[2025-06-05 20:01:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 21:27:15]  *** The last 200 lines of the pilot log: ***
[2025-06-05 21:27:15]  filetype=log
[2025-06-05 21:27:15]  guid=68bba1e5-9b4c-423f-a5a8-c865ae164a95
[2025-06-05 21:27:15]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-05 21:27:15]  is_altstaged=None
[2025-06-05 21:27:15]  is_tar=False
[2025-06-05 21:27:15]  lfn=log.45006595._053028.job.log.tgz.1
[2025-06-05 21:27:15]  mtime=0
[2025-06-05 21:27:15]  protocol_id=None
[2025-06-05 21:27:15]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 21:27:15]  replicas=None
[2025-06-05 21:27:15]  scope=mc23_13p6TeV
[2025-06-05 21:27:15]  status=None
[2025-06-05 21:27:15]  status_code=0
[2025-06-05 21:27:15]  storage_token=
[2025-06-05 21:27:15]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6678362533/log.45006595._053028.job.log.tgz.1
[2025-06-05 21:27:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/08/14/log.45006595._053028.job.log.tgz.1
[2025-06-05 21:27:15]  workdir=None
[2025-06-05 21:27:15] ]
[2025-06-05 21:27:15] 2025-06-06 01:26:50,723 | INFO     | transferring file log.45006595._053028.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6678362533/log.45006595._053028.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 21:27:15] 2025-06-06 01:26:50,723 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6678362533/log.45006595._053028.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._053028.job
[2025-06-05 21:27:15] 2025-06-06 01:26:50,742 | INFO     | adding to output.list: log.45006595._053028.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/08/14/log.45006595._053028.job.log.tg
[2025-06-05 21:27:15] 2025-06-06 01:26:50,743 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 21:27:15] 2025-06-06 01:26:50,743 | INFO     | summary of transferred files:
[2025-06-05 21:27:15] 2025-06-06 01:26:50,743 | INFO     |  -- lfn=log.45006595._053028.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 21:27:15] 2025-06-06 01:26:50,743 | INFO     | stage-out finished correctly
[2025-06-05 21:27:15] 2025-06-06 01:26:50,839 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 21:27:15] 2025-06-06 01:26:50,888 | INFO     | monitor loop #357: job 0:6678362533 is in state 'finished'
[2025-06-05 21:27:15] 2025-06-06 01:26:50,898 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 21:27:15] 2025-06-06 01:26:50,934 | INFO     | job 6678362533 has state=finished
[2025-06-05 21:27:15] 2025-06-06 01:26:50,934 | INFO     | preparing for final server update for job 6678362533 in state='finished'
[2025-06-05 21:27:15] 2025-06-06 01:26:50,935 | INFO     | this job has now completed (state=finished)
[2025-06-05 21:27:15] 2025-06-06 01:26:50,935 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 21:27:15] 2025-06-06 01:26:50,935 | INFO     | log transfer has been attempted: DONE
[2025-06-05 21:27:15] 2025-06-06 01:26:50,935 | INFO     | job 6678362533 has finished - writing final server update
[2025-06-05 21:27:15] 2025-06-06 01:26:50,935 | INFO     | total number of processed events: 400 (read)
[2025-06-05 21:27:15] 2025-06-06 01:26:50,952 | INFO     | executing command: lscpu
[2025-06-05 21:27:15] 2025-06-06 01:26:51,027 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 21:27:15] 2025-06-06 01:26:53,412 | INFO     | monitor loop #358: job 0:6678362533 is in state 'finished'
[2025-06-05 21:27:15] 2025-06-06 01:26:53,412 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 21:27:15] 2025-06-06 01:26:55,569 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 21:27:15] 2025-06-06 01:26:55,570 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678362533/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 21:27:15] 2025-06-06 01:26:55,571 | INFO     | extracted standard info from prmon json
[2025-06-05 21:27:15] 2025-06-06 01:26:55,571 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 21:27:15] 2025-06-06 01:26:55,571 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 21:27:15] 2025-06-06 01:26:55,572 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 21:27:15] 2025-06-06 01:26:55,572 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 21:27:15] 2025-06-06 01:26:55,574 | INFO     | fitting pss+swap vs Time
[2025-06-05 21:27:15] 2025-06-06 01:26:55,574 | INFO     | sum of square deviations: 141539398.0
[2025-06-05 21:27:15] 2025-06-06 01:26:55,575 | INFO     | sum of deviations: -1171248556.0000005
[2025-06-05 21:27:15] 2025-06-06 01:26:55,575 | INFO     | mean x: 1749170743.0
[2025-06-05 21:27:15] 2025-06-06 01:26:55,575 | INFO     | mean y: 2256289.8571428573
[2025-06-05 21:27:15] 2025-06-06 01:26:55,575 | INFO     | -- intersect: 14476768234.130058
[2025-06-05 21:27:15] 2025-06-06 01:26:55,575 | INFO     | intersect: 14476768234.130058
[2025-06-05 21:27:15] 2025-06-06 01:26:55,575 | INFO     | chi2: 0.04138175777230076
[2025-06-05 21:27:15] 2025-06-06 01:26:55,576 | INFO     | -- intersect: 14476768234.130058
[2025-06-05 21:27:15] 2025-06-06 01:26:55,576 | INFO     | current memory leak: -8.28 B/s (using 77 data points, chi2=0.04)
[2025-06-05 21:27:15] 2025-06-06 01:26:55,576 | INFO     | ..............................
[2025-06-05 21:27:15] 2025-06-06 01:26:55,576 | INFO     | . Timing measurements:
[2025-06-05 21:27:15] 2025-06-06 01:26:55,576 | INFO     | . get job = 0 s
[2025-06-05 21:27:15] 2025-06-06 01:26:55,576 | INFO     | . initial setup = 2 s
[2025-06-05 21:27:15] 2025-06-06 01:26:55,576 | INFO     | . payload setup = 7 s
[2025-06-05 21:27:15] 2025-06-06 01:26:55,576 | INFO     | . stage-in = 0 s
[2025-06-05 21:27:15] 2025-06-06 01:26:55,577 | INFO     | . payload execution = 5091 s
[2025-06-05 21:27:15] 2025-06-06 01:26:55,577 | INFO     | . stage-out = 0 s
[2025-06-05 21:27:15] 2025-06-06 01:26:55,577 | INFO     | . log creation = 0 s
[2025-06-05 21:27:15] 2025-06-06 01:26:55,577 | INFO     | ..............................
[2025-06-05 21:27:15] 2025-06-06 01:26:55,669 | INFO     | 
[2025-06-05 21:27:15] 2025-06-06 01:26:55,670 | INFO     | job summary report
[2025-06-05 21:27:15] 2025-06-06 01:26:55,670 | INFO     | --------------------------------------------------
[2025-06-05 21:27:15] 2025-06-06 01:26:55,670 | INFO     | PanDA job id: 6678362533
[2025-06-05 21:27:15] 2025-06-06 01:26:55,670 | INFO     | task id: 45006595
[2025-06-05 21:27:15] 2025-06-06 01:26:55,670 | INFO     | errors: (none)
[2025-06-05 21:27:15] 2025-06-06 01:26:55,670 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 21:27:15] 2025-06-06 01:26:55,670 | INFO     | pilot state: finished 
[2025-06-05 21:27:15] 2025-06-06 01:26:55,670 | INFO     | transexitcode: 0
[2025-06-05 21:27:15] 2025-06-06 01:26:55,670 | INFO     | exeerrorcode: 0
[2025-06-05 21:27:15] 2025-06-06 01:26:55,670 | INFO     | exeerrordiag: 
[2025-06-05 21:27:15] 2025-06-06 01:26:55,670 | INFO     | exitcode: 0
[2025-06-05 21:27:15] 2025-06-06 01:26:55,670 | INFO     | exitmsg: OK
[2025-06-05 21:27:15] 2025-06-06 01:26:55,670 | INFO     | cpuconsumptiontime: 35917 s
[2025-06-05 21:27:15] 2025-06-06 01:26:55,670 | INFO     | nevents: 400
[2025-06-05 21:27:15] 2025-06-06 01:26:55,670 | INFO     | neventsw: 0
[2025-06-05 21:27:15] 2025-06-06 01:26:55,670 | INFO     | pid: 2006076
[2025-06-05 21:27:15] 2025-06-06 01:26:55,670 | INFO     | pgrp: 2006076
[2025-06-05 21:27:15] 2025-06-06 01:26:55,670 | INFO     | corecount: 10
[2025-06-05 21:27:15] 2025-06-06 01:26:55,670 | INFO     | event service: False
[2025-06-05 21:27:15] 2025-06-06 01:26:55,670 | INFO     | sizes: {0: 2397342, 1: 2397342, 6: 2397576, 11: 2397604, 5103: 2424064, 5104: 2433189, 5109: 2433303}
[2025-06-05 21:27:15] 2025-06-06 01:26:55,670 | INFO     | --------------------------------------------------
[2025-06-05 21:27:15] 2025-06-06 01:26:55,671 | INFO     | 
[2025-06-05 21:27:15] 2025-06-06 01:26:55,671 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-05 21:27:15] 2025-06-06 01:26:55,689 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 21:27:15] 2025-06-06 01:26:55,689 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 21:27:15] 2025-06-06 01:26:55,689 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 21:27:15] 2025-06-06 01:26:55,689 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 21:27:15] 2025-06-06 01:26:55,689 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 21:27:15] 2025-06-06 01:26:55,689 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 21:27:15] 2025-06-06 01:26:55,689 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 21:27:15] 2025-06-06 01:26:55,690 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 21:27:15] 2025-06-06 01:26:55,690 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 21:27:15] 2025-06-06 01:26:55,690 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 21:27:15] 2025-06-06 01:26:55,690 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 21:27:15] 2025-06-06 01:26:55,690 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 21:27:15] 2025-06-06 01:26:55,690 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 21:27:15] 2025-06-06 01:26:55,690 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 21:27:15] 2025-06-06 01:26:55,690 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 21:27:15] 2025-06-06 01:26:55,690 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 21:27:15] 2025-06-06 01:26:55,690 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 21:27:15] 2025-06-06 01:26:55,690 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 21:27:15] 2025-06-06 01:26:55,690 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 21:27:15] 2025-06-06 01:26:55,690 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 21:27:15] 2025-06-06 01:26:55,691 | INFO     | job 6678362533 has completed (purged errors)
[2025-06-05 21:27:15] 2025-06-06 01:26:55,691 | INFO     | overall cleanup function is called
[2025-06-05 21:27:15] 2025-06-06 01:26:56,699 | INFO     | --- collectZombieJob: --- 10, [2006076]
[2025-06-05 21:27:15] 2025-06-06 01:26:56,699 | INFO     | zombie collector waiting for pid 2006076
[2025-06-05 21:27:15] 2025-06-06 01:26:56,699 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 21:27:15] 2025-06-06 01:26:56,699 | INFO     | collected zombie processes
[2025-06-05 21:27:15] 2025-06-06 01:26:56,699 | INFO     | will attempt to kill all subprocesses of pid=2006076
[2025-06-05 21:27:15] 2025-06-06 01:26:57,058 | INFO     | process IDs to be killed: [2006076] (in reverse order)
[2025-06-05 21:27:15] 2025-06-06 01:26:57,153 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 21:27:15] 2025-06-06 01:26:57,154 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 21:27:15] 2025-06-06 01:26:57,166 | INFO     | did not find any defunct processes belonging to 2006076
[2025-06-05 21:27:15] 2025-06-06 01:26:57,179 | INFO     | did not find any defunct processes belonging to 2006076
[2025-06-05 21:27:15] 2025-06-06 01:26:57,179 | INFO     | ready for new job
[2025-06-05 21:27:15] 2025-06-06 01:26:57,179 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 21:27:15] 2025-06-06 01:26:57,180 | INFO     | **************************************
[2025-06-05 21:27:15] 2025-06-06 01:26:57,181 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 21:27:15] 2025-06-06 01:26:57,181 | INFO     | **************************************
[2025-06-05 21:27:15] 2025-06-06 01:26:57,181 | INFO     | 
[2025-06-05 21:27:15] 2025-06-06 01:26:57,196 | INFO     | architecture information:
[2025-06-05 21:27:15] 2025-06-06 01:26:57,197 | INFO     | executing command: cat /etc/os-release
[2025-06-05 21:27:15] 2025-06-06 01:26:57,209 | INFO     | cat /etc/os-release:
[2025-06-05 21:27:15] NAME="CentOS Linux"
[2025-06-05 21:27:15] VERSION="7 (Core)"
[2025-06-05 21:27:15] ID="centos"
[2025-06-05 21:27:15] ID_LIKE="rhel fedora"
[2025-06-05 21:27:15] VERSION_ID="7"
[2025-06-05 21:27:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 21:27:15] ANSI_COLOR="0;31"
[2025-06-05 21:27:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 21:27:15] HOME_URL="https://www.centos.org/"
[2025-06-05 21:27:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 21:27:15] 
[2025-06-05 21:27:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 21:27:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 21:27:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 21:27:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 21:27:15] 
[2025-06-05 21:27:15] 2025-06-06 01:26:57,209 | INFO     | **************************************
[2025-06-05 21:27:15] 2025-06-06 01:26:57,712 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-05 21:27:15] 2025-06-06 01:26:57,732 | INFO     | sufficient remaining disk space (76505153536 B)
[2025-06-05 21:27:15] 2025-06-06 01:26:57,732 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 21:27:15] 2025-06-06 01:26:57,733 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 21:27:15] 2025-06-06 01:26:57,733 | INFO     | update_server=False
[2025-06-05 21:27:15] 2025-06-06 01:26:57,733 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 21:27:15] 2025-06-06 01:26:57,733 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 21:27:15] 2025-06-06 01:26:57,733 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 21:27:15] 2025-06-06 01:26:57,733 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 21:27:15] 2025-06-06 01:26:57,734 | INFO     | aborting loop
[2025-06-05 21:27:15] 2025-06-06 01:26:57,736 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 21:27:15] 2025-06-06 01:26:57,736 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 21:27:15] 2025-06-06 01:26:57,736 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 21:27:15] 2025-06-06 01:26:57,804 | INFO     | all job control threads have been joined
[2025-06-05 21:27:15] 2025-06-06 01:26:58,170 | INFO     | all payload control threads have been joined
[2025-06-05 21:27:15] 2025-06-06 01:26:58,597 | INFO     | all data control threads have been joined
[2025-06-05 21:27:15] 2025-06-06 01:26:58,738 | INFO     | [job] retrieve thread has finished
[2025-06-05 21:27:15] 2025-06-06 01:26:58,740 | INFO     | [job] job monitor thread has finished
[2025-06-05 21:27:15] 2025-06-06 01:26:58,809 | INFO     | [job] control thread has finished
[2025-06-05 21:27:15] 2025-06-06 01:26:58,849 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 21:27:15] 2025-06-06 01:26:58,874 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 21:27:15] 2025-06-06 01:26:58,997 | INFO     | [payload] validate_post thread has finished
[2025-06-05 21:27:15] 2025-06-06 01:26:59,175 | INFO     | [payload] control thread has finished
[2025-06-05 21:27:15] 2025-06-06 01:26:59,464 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 21:27:15] 2025-06-06 01:26:59,518 | INFO     | [data] copytool_in thread has finished
[2025-06-05 21:27:15] 2025-06-06 01:26:59,602 | INFO     | [data] control thread has finished
[2025-06-05 21:27:15] 2025-06-06 01:26:59,872 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 21:27:15] 2025-06-06 01:26:59,923 | INFO     | [job] validate thread has finished
[2025-06-05 21:27:15] 2025-06-06 01:27:00,101 | INFO     | [payload] failed_post thread has finished
[2025-06-05 21:27:15] 2025-06-06 01:27:00,679 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 21:27:15] 2025-06-06 01:27:00,854 | INFO     | [data] copytool_out thread has finished
[2025-06-05 21:27:15] 2025-06-06 01:27:01,684 | INFO     | [job] queue monitor thread has finished
[2025-06-05 21:27:15] 2025-06-06 01:27:01,740 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 21:27:15] 2025-06-06 01:27:08,537 | INFO     | job.realtimelogging is not enabled
[2025-06-05 21:27:15] 2025-06-06 01:27:09,542 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 21:27:15] 2025-06-06 01:27:10,137 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140158212179776)>', '<ExcThread(monitor, started 140157592266496)>']
[2025-06-05 21:27:15] 2025-06-06 01:27:10,800 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 21:27:15] 2025-06-06 01:27:10,801 | INFO     | [monitor] control thread has ended
[2025-06-05 21:27:15] 2025-06-06 01:27:15,162 | INFO     | all workflow threads have been joined
[2025-06-05 21:27:15] 2025-06-06 01:27:15,162 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 21:27:15] 2025-06-06 01:27:15,162 | INFO     | traces error code: 0
[2025-06-05 21:27:15] 2025-06-06 01:27:15,163 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 21:27:15] 2025-06-06 01:27:15,334 [wrapper] ==== pilot stdout END ====
[2025-06-05 21:27:15] 2025-06-06 01:27:15,337 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 21:27:15] 2025-06-06 01:27:15,340 [wrapper] pilotpid: 1980770
[2025-06-05 21:27:15] 2025-06-06 01:27:15,342 [wrapper] Pilot exit status: 0
[2025-06-05 21:27:15] 2025-06-06 01:27:15,352 [wrapper] pandaids: 6678362533
[2025-06-05 21:27:15] 2025-06-06 01:27:15,453 [wrapper] cleanup supervisor_pilot 2544285 1980771
[2025-06-05 21:27:15] 2025-06-06 01:27:15,456 [wrapper] Test setup, not cleaning
[2025-06-05 21:27:15] 2025-06-06 01:27:15,459 [wrapper] apfmon messages muted
[2025-06-05 21:27:15] 2025-06-06 01:27:15,462 [wrapper] ==== wrapper stdout END ====
[2025-06-05 21:27:15] 2025-06-06 01:27:15,464 [wrapper] ==== wrapper stderr END ====
[2025-06-05 21:27:15]  *** Error codes and diagnostics ***
[2025-06-05 21:27:15]     "exeErrorCode": 0,
[2025-06-05 21:27:15]     "exeErrorDiag": "",
[2025-06-05 21:27:15]     "pilotErrorCode": 0,
[2025-06-05 21:27:15]     "pilotErrorDiag": "",
[2025-06-05 21:27:15]  *** Listing of results directory ***
[2025-06-05 21:27:15] total 380628
[2025-06-05 21:27:15] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 00:58 pilot3.tar.gz
[2025-06-05 21:27:15] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 01:09 queuedata.json
[2025-06-05 21:27:15] -rwx------. 1 boincer umatlas     37140 Jun  4 01:11 runpilot2-wrapper.sh
[2025-06-05 21:27:15] -rw-r--r--. 1 boincer umatlas       100 Jun  5 20:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 21:27:15] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 20:01 run_atlas
[2025-06-05 21:27:15] -rw-r--r--. 1 boincer umatlas       105 Jun  5 20:01 job.xml
[2025-06-05 21:27:15] -rw-r--r--. 2 boincer umatlas 213760797 Jun  5 20:01 EVNT.45006593._002122.pool.root.1
[2025-06-05 21:27:15] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 20:01 start_atlas.sh
[2025-06-05 21:27:15] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 20:01 shared
[2025-06-05 21:27:15] -rw-r--r--. 2 boincer umatlas    508882 Jun  5 20:01 input.tar.gz
[2025-06-05 21:27:15] -rw-r--r--. 1 boincer umatlas         0 Jun  5 20:01 boinc_lockfile
[2025-06-05 21:27:15] -rw-r--r--. 1 boincer umatlas      2525 Jun  5 20:01 pandaJob.out
[2025-06-05 21:27:15] -rw-------. 1 boincer umatlas    987721 Jun  5 20:01 agis_schedconf.cvmfs.json
[2025-06-05 21:27:15] -rw-------. 1 boincer umatlas   1598969 Jun  5 20:01 agis_ddmendpoints.agis.ALL.json
[2025-06-05 21:27:15] drwx------. 4 boincer umatlas      4096 Jun  5 20:01 pilot3
[2025-06-05 21:27:15] -rw-r--r--. 1 boincer umatlas      6837 Jun  5 21:22 init_data.xml
[2025-06-05 21:27:15] -rw-------. 1 boincer umatlas 170489276 Jun  5 21:26 HITS.45006595._053028.pool.root.1
[2025-06-05 21:27:15] -rw-r--r--. 1 boincer umatlas       529 Jun  5 21:26 boinc_task_state.xml
[2025-06-05 21:27:15] -rw-------. 1 boincer umatlas      1042 Jun  5 21:26 memory_monitor_summary.json
[2025-06-05 21:27:15] -rw-------. 1 boincer umatlas    348677 Jun  5 21:26 log.45006595._053028.job.log.tgz.1
[2025-06-05 21:27:15] -rw-------. 1 boincer umatlas      7710 Jun  5 21:26 heartbeat.json
[2025-06-05 21:27:15] -rw-------. 1 boincer umatlas        95 Jun  5 21:26 pilot_heartbeat.json
[2025-06-05 21:27:15] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 21:26 boinc_mmap_file
[2025-06-05 21:27:15] -rw-r--r--. 1 boincer umatlas        27 Jun  5 21:26 wrapper_checkpoint.txt
[2025-06-05 21:27:15] -rw-------. 1 boincer umatlas      4548 Jun  5 21:27 pilotlog.txt
[2025-06-05 21:27:15] -rw-------. 1 boincer umatlas    488988 Jun  5 21:27 log.45006595._053028.job.log.1
[2025-06-05 21:27:15] -rw-------. 1 boincer umatlas       357 Jun  5 21:27 output.list
[2025-06-05 21:27:15] -rw-r--r--. 1 boincer umatlas       620 Jun  5 21:27 runtime_log
[2025-06-05 21:27:15] -rw-------. 1 boincer umatlas    860160 Jun  5 21:27 result.tar.gz
[2025-06-05 21:27:15] -rw-------. 1 boincer umatlas       649 Jun  5 21:27 TXtMDmiavg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmxjaKDmL0XPfn.diag
[2025-06-05 21:27:15] -rw-r--r--. 1 boincer umatlas      8646 Jun  5 21:27 runtime_log.err
[2025-06-05 21:27:15] -rw-r--r--. 1 boincer umatlas     21209 Jun  5 21:27 stderr.txt
[2025-06-05 21:27:15] HITS file was successfully produced:
[2025-06-05 21:27:15] -rw-------. 1 boincer umatlas 170489276 Jun  5 21:26 shared/HITS.pool.root.1
[2025-06-05 21:27:15]  *** Contents of shared directory: ***
[2025-06-05 21:27:15] total 376608
[2025-06-05 21:27:15] -rw-r--r--. 2 boincer umatlas 213760797 Jun  5 20:01 ATLAS.root_0
[2025-06-05 21:27:15] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 20:01 start_atlas.sh
[2025-06-05 21:27:15] -rw-r--r--. 2 boincer umatlas    508882 Jun  5 20:01 input.tar.gz
[2025-06-05 21:27:15] -rw-------. 1 boincer umatlas 170489276 Jun  5 21:26 HITS.pool.root.1
[2025-06-05 21:27:15] -rw-------. 1 boincer umatlas    860160 Jun  5 21:27 result.tar.gz
21:27:17 (1975717): run_atlas exited; CPU time 36102.358509
21:27:17 (1975717): called boinc_finish(0)

</stderr_txt>
]]>

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