Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:49:32 (29718): wrapper (7.7.26015): starting
19:49:32 (29718): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 19:49:32] Arguments: --nthreads 12
[2025-06-05 19:49:32] Threads: 12
[2025-06-05 19:49:32] Checking for CVMFS
[2025-06-05 19:49:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 19:49:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 19:49:32] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 19:49:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 19:49:33] 2.11.2.0 28623 30427 91312 146836 1 1 19888319 20275201 1 130560 0 14738077 99.983 5733499 7054 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 19:49:33] CVMFS is ok
[2025-06-05 19:49:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 19:49:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 19:49:33] Further information can be found at the LHC@home message board.
[2025-06-05 19:49:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 19:49:33] Checking for apptainer binary...
[2025-06-05 19:49:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 19:49:33] Running /usr/bin/apptainer --version
[2025-06-05 19:49:33] apptainer version 1.3.2-1.el7
[2025-06-05 19:49:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 19:49:34] c-205-20.aglt2.org
[2025-06-05 19:49:34] apptainer works
[2025-06-05 19:49:34] Set ATHENA_PROC_NUMBER=12
[2025-06-05 19:49:34] Set ATHENA_CORE_NUMBER=12
[2025-06-05 19:49:34] Starting ATLAS job with PandaID=6669135933
[2025-06-05 19:49:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 21:24:45]  *** The last 200 lines of the pilot log: ***
[2025-06-05 21:24:45]  guid=e3b2cf36-6081-49a6-85ee-b103464a41ba
[2025-06-05 21:24:45]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-05 21:24:45]  is_altstaged=None
[2025-06-05 21:24:45]  is_tar=False
[2025-06-05 21:24:45]  lfn=log.44871837._094213.job.log.tgz.1
[2025-06-05 21:24:45]  mtime=0
[2025-06-05 21:24:45]  protocol_id=None
[2025-06-05 21:24:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 21:24:45]  replicas=None
[2025-06-05 21:24:45]  scope=mc23_13p6TeV
[2025-06-05 21:24:45]  status=None
[2025-06-05 21:24:45]  status_code=0
[2025-06-05 21:24:45]  storage_token=
[2025-06-05 21:24:45]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6669135933/log.44871837._094213.job.log.tgz.1
[2025-06-05 21:24:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/23/30/log.44871837._094213.job.log.tgz.1
[2025-06-05 21:24:45]  workdir=None
[2025-06-05 21:24:45] ]
[2025-06-05 21:24:45] 2025-06-06 01:24:22,228 | INFO     | transferring file log.44871837._094213.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6669135933/log.44871837._094213.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 21:24:45] 2025-06-06 01:24:22,228 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6669135933/log.44871837._094213.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._094213.job
[2025-06-05 21:24:45] 2025-06-06 01:24:22,249 | INFO     | adding to output.list: log.44871837._094213.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/23/30/log.44871837._094213.job.log.tg
[2025-06-05 21:24:45] 2025-06-06 01:24:22,250 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 21:24:45] 2025-06-06 01:24:22,250 | INFO     | summary of transferred files:
[2025-06-05 21:24:45] 2025-06-06 01:24:22,250 | INFO     |  -- lfn=log.44871837._094213.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 21:24:45] 2025-06-06 01:24:22,251 | INFO     | stage-out finished correctly
[2025-06-05 21:24:45] 2025-06-06 01:24:23,380 | INFO     | monitor loop #424: job 0:6669135933 is in state 'finished'
[2025-06-05 21:24:45] 2025-06-06 01:24:23,380 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 21:24:45] 2025-06-06 01:24:23,659 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 21:24:45] 2025-06-06 01:24:25,578 | INFO     | job 6669135933 has state=finished
[2025-06-05 21:24:45] 2025-06-06 01:24:25,578 | INFO     | preparing for final server update for job 6669135933 in state='finished'
[2025-06-05 21:24:45] 2025-06-06 01:24:25,579 | INFO     | this job has now completed (state=finished)
[2025-06-05 21:24:45] 2025-06-06 01:24:25,579 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 21:24:45] 2025-06-06 01:24:25,579 | INFO     | log transfer has been attempted: DONE
[2025-06-05 21:24:45] 2025-06-06 01:24:25,579 | INFO     | job 6669135933 has finished - writing final server update
[2025-06-05 21:24:45] 2025-06-06 01:24:25,580 | INFO     | total number of processed events: 400 (read)
[2025-06-05 21:24:45] 2025-06-06 01:24:25,581 | INFO     | executing command: lscpu
[2025-06-05 21:24:45] 2025-06-06 01:24:25,607 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 21:24:45] 2025-06-06 01:24:25,883 | INFO     | monitor loop #425: job 0:6669135933 is in state 'finished'
[2025-06-05 21:24:45] 2025-06-06 01:24:25,888 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 21:24:45] 2025-06-06 01:24:28,392 | INFO     | monitor loop #426: job 0:6669135933 is in state 'finished'
[2025-06-05 21:24:45] 2025-06-06 01:24:28,392 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 21:24:45] 2025-06-06 01:24:30,139 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-05 21:24:45] 2025-06-06 01:24:30,140 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6669135933/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 21:24:45] 2025-06-06 01:24:30,141 | INFO     | extracted standard info from prmon json
[2025-06-05 21:24:45] 2025-06-06 01:24:30,141 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 21:24:45] 2025-06-06 01:24:30,142 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 21:24:45] 2025-06-06 01:24:30,142 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 21:24:45] 2025-06-06 01:24:30,142 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 21:24:45] 2025-06-06 01:24:30,145 | INFO     | fitting pss+swap vs Time
[2025-06-05 21:24:45] 2025-06-06 01:24:30,146 | INFO     | sum of square deviations: 197203697.5
[2025-06-05 21:24:45] 2025-06-06 01:24:30,146 | INFO     | sum of deviations: -8490330262.000001
[2025-06-05 21:24:45] 2025-06-06 01:24:30,146 | INFO     | mean x: 1749170315.5
[2025-06-05 21:24:45] 2025-06-06 01:24:30,147 | INFO     | mean y: 2737393.1395348837
[2025-06-05 21:24:45] 2025-06-06 01:24:30,147 | INFO     | -- intersect: 75310826700.55092
[2025-06-05 21:24:45] 2025-06-06 01:24:30,147 | INFO     | intersect: 75310826700.55092
[2025-06-05 21:24:45] 2025-06-06 01:24:30,147 | INFO     | chi2: 0.09530432246231725
[2025-06-05 21:24:45] 2025-06-06 01:24:30,148 | INFO     | -- intersect: 75310826700.55092
[2025-06-05 21:24:45] 2025-06-06 01:24:30,148 | INFO     | current memory leak: -43.05 B/s (using 86 data points, chi2=0.10)
[2025-06-05 21:24:45] 2025-06-06 01:24:30,148 | INFO     | ..............................
[2025-06-05 21:24:45] 2025-06-06 01:24:30,148 | INFO     | . Timing measurements:
[2025-06-05 21:24:45] 2025-06-06 01:24:30,149 | INFO     | . get job = 0 s
[2025-06-05 21:24:45] 2025-06-06 01:24:30,149 | INFO     | . initial setup = 2 s
[2025-06-05 21:24:45] 2025-06-06 01:24:30,149 | INFO     | . payload setup = 9 s
[2025-06-05 21:24:45] 2025-06-06 01:24:30,149 | INFO     | . stage-in = 0 s
[2025-06-05 21:24:45] 2025-06-06 01:24:30,149 | INFO     | . payload execution = 5644 s
[2025-06-05 21:24:45] 2025-06-06 01:24:30,149 | INFO     | . stage-out = 0 s
[2025-06-05 21:24:45] 2025-06-06 01:24:30,149 | INFO     | . log creation = 0 s
[2025-06-05 21:24:45] 2025-06-06 01:24:30,149 | INFO     | ..............................
[2025-06-05 21:24:45] 2025-06-06 01:24:30,236 | INFO     | 
[2025-06-05 21:24:45] 2025-06-06 01:24:30,236 | INFO     | job summary report
[2025-06-05 21:24:45] 2025-06-06 01:24:30,236 | INFO     | --------------------------------------------------
[2025-06-05 21:24:45] 2025-06-06 01:24:30,236 | INFO     | PanDA job id: 6669135933
[2025-06-05 21:24:45] 2025-06-06 01:24:30,237 | INFO     | task id: 44871837
[2025-06-05 21:24:45] 2025-06-06 01:24:30,237 | INFO     | errors: (none)
[2025-06-05 21:24:45] 2025-06-06 01:24:30,237 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 21:24:45] 2025-06-06 01:24:30,237 | INFO     | pilot state: finished 
[2025-06-05 21:24:45] 2025-06-06 01:24:30,237 | INFO     | transexitcode: 0
[2025-06-05 21:24:45] 2025-06-06 01:24:30,237 | INFO     | exeerrorcode: 0
[2025-06-05 21:24:45] 2025-06-06 01:24:30,237 | INFO     | exeerrordiag: 
[2025-06-05 21:24:45] 2025-06-06 01:24:30,237 | INFO     | exitcode: 0
[2025-06-05 21:24:45] 2025-06-06 01:24:30,237 | INFO     | exitmsg: OK
[2025-06-05 21:24:45] 2025-06-06 01:24:30,237 | INFO     | cpuconsumptiontime: 62066 s
[2025-06-05 21:24:45] 2025-06-06 01:24:30,238 | INFO     | nevents: 400
[2025-06-05 21:24:45] 2025-06-06 01:24:30,238 | INFO     | neventsw: 0
[2025-06-05 21:24:45] 2025-06-06 01:24:30,238 | INFO     | pid: 8468
[2025-06-05 21:24:45] 2025-06-06 01:24:30,238 | INFO     | pgrp: 8468
[2025-06-05 21:24:45] 2025-06-06 01:24:30,238 | INFO     | corecount: 12
[2025-06-05 21:24:45] 2025-06-06 01:24:30,238 | INFO     | event service: False
[2025-06-05 21:24:45] 2025-06-06 01:24:30,238 | INFO     | sizes: {0: 2397390, 1: 2397390, 5: 2397624, 11: 2397680, 5657: 2424151, 5658: 2433275, 5660: 2433275, 5666: 2433445}
[2025-06-05 21:24:45] 2025-06-06 01:24:30,238 | INFO     | --------------------------------------------------
[2025-06-05 21:24:45] 2025-06-06 01:24:30,238 | INFO     | 
[2025-06-05 21:24:45] 2025-06-06 01:24:30,239 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 21:24:45] 2025-06-06 01:24:30,260 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 21:24:45] 2025-06-06 01:24:30,261 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 21:24:45] 2025-06-06 01:24:30,261 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 21:24:45] 2025-06-06 01:24:30,261 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 21:24:45] 2025-06-06 01:24:30,261 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 21:24:45] 2025-06-06 01:24:30,261 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 21:24:45] 2025-06-06 01:24:30,262 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 21:24:45] 2025-06-06 01:24:30,262 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 21:24:45] 2025-06-06 01:24:30,262 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 21:24:45] 2025-06-06 01:24:30,262 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 21:24:45] 2025-06-06 01:24:30,262 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 21:24:45] 2025-06-06 01:24:30,262 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 21:24:45] 2025-06-06 01:24:30,262 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 21:24:45] 2025-06-06 01:24:30,263 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 21:24:45] 2025-06-06 01:24:30,263 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 21:24:45] 2025-06-06 01:24:30,263 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 21:24:45] 2025-06-06 01:24:30,263 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 21:24:45] 2025-06-06 01:24:30,263 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 21:24:45] 2025-06-06 01:24:30,263 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 21:24:45] 2025-06-06 01:24:30,264 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 21:24:45] 2025-06-06 01:24:30,264 | INFO     | job 6669135933 has completed (purged errors)
[2025-06-05 21:24:45] 2025-06-06 01:24:30,264 | INFO     | overall cleanup function is called
[2025-06-05 21:24:45] 2025-06-06 01:24:31,272 | INFO     | --- collectZombieJob: --- 10, [8468]
[2025-06-05 21:24:45] 2025-06-06 01:24:31,272 | INFO     | zombie collector waiting for pid 8468
[2025-06-05 21:24:45] 2025-06-06 01:24:31,280 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 21:24:45] 2025-06-06 01:24:31,280 | INFO     | collected zombie processes
[2025-06-05 21:24:45] 2025-06-06 01:24:31,280 | INFO     | will attempt to kill all subprocesses of pid=8468
[2025-06-05 21:24:45] 2025-06-06 01:24:31,372 | INFO     | process IDs to be killed: [8468] (in reverse order)
[2025-06-05 21:24:45] 2025-06-06 01:24:31,432 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 21:24:45] 2025-06-06 01:24:31,433 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 21:24:45] 2025-06-06 01:24:31,437 | INFO     | did not find any defunct processes belonging to 8468
[2025-06-05 21:24:45] 2025-06-06 01:24:31,440 | INFO     | did not find any defunct processes belonging to 8468
[2025-06-05 21:24:45] 2025-06-06 01:24:31,440 | INFO     | ready for new job
[2025-06-05 21:24:45] 2025-06-06 01:24:31,440 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 21:24:45] 2025-06-06 01:24:31,441 | INFO     | **************************************
[2025-06-05 21:24:45] 2025-06-06 01:24:31,441 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 21:24:45] 2025-06-06 01:24:31,441 | INFO     | **************************************
[2025-06-05 21:24:45] 2025-06-06 01:24:31,441 | INFO     | 
[2025-06-05 21:24:45] 2025-06-06 01:24:31,442 | INFO     | architecture information:
[2025-06-05 21:24:45] 2025-06-06 01:24:31,442 | INFO     | executing command: cat /etc/os-release
[2025-06-05 21:24:45] 2025-06-06 01:24:31,456 | INFO     | cat /etc/os-release:
[2025-06-05 21:24:45] NAME="CentOS Linux"
[2025-06-05 21:24:45] VERSION="7 (Core)"
[2025-06-05 21:24:45] ID="centos"
[2025-06-05 21:24:45] ID_LIKE="rhel fedora"
[2025-06-05 21:24:45] VERSION_ID="7"
[2025-06-05 21:24:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 21:24:45] ANSI_COLOR="0;31"
[2025-06-05 21:24:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 21:24:45] HOME_URL="https://www.centos.org/"
[2025-06-05 21:24:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 21:24:45] 
[2025-06-05 21:24:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 21:24:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 21:24:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 21:24:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 21:24:45] 
[2025-06-05 21:24:45] 2025-06-06 01:24:31,456 | INFO     | **************************************
[2025-06-05 21:24:45] 2025-06-06 01:24:31,959 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 21:24:45] 2025-06-06 01:24:31,975 | INFO     | sufficient remaining disk space (29383196672 B)
[2025-06-05 21:24:45] 2025-06-06 01:24:31,975 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 21:24:45] 2025-06-06 01:24:31,975 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 21:24:45] 2025-06-06 01:24:31,976 | INFO     | update_server=False
[2025-06-05 21:24:45] 2025-06-06 01:24:31,976 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 21:24:45] 2025-06-06 01:24:31,976 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 21:24:45] 2025-06-06 01:24:31,976 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 21:24:45] 2025-06-06 01:24:31,977 | INFO     | aborting loop
[2025-06-05 21:24:45] 2025-06-06 01:24:32,082 | INFO     | all data control threads have been joined
[2025-06-05 21:24:45] 2025-06-06 01:24:32,171 | INFO     | all payload control threads have been joined
[2025-06-05 21:24:45] 2025-06-06 01:24:32,439 | INFO     | all job control threads have been joined
[2025-06-05 21:24:45] 2025-06-06 01:24:32,537 | INFO     | PID=934 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-06-05 21:24:45] 2025-06-06 01:24:32,537 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 21:24:45] 2025-06-06 01:24:32,537 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 21:24:45] 2025-06-06 01:24:32,537 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 21:24:45] 2025-06-06 01:24:32,850 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 21:24:45] 2025-06-06 01:24:32,981 | INFO     | [job] retrieve thread has finished
[2025-06-05 21:24:45] 2025-06-06 01:24:32,982 | INFO     | [job] queue monitor thread has finished
[2025-06-05 21:24:45] 2025-06-06 01:24:32,983 | INFO     | [job] job monitor thread has finished
[2025-06-05 21:24:45] 2025-06-06 01:24:33,088 | INFO     | [data] control thread has finished
[2025-06-05 21:24:45] 2025-06-06 01:24:33,119 | INFO     | [payload] failed_post thread has finished
[2025-06-05 21:24:45] 2025-06-06 01:24:33,159 | INFO     | [data] copytool_in thread has finished
[2025-06-05 21:24:45] 2025-06-06 01:24:33,177 | INFO     | [payload] control thread has finished
[2025-06-05 21:24:45] 2025-06-06 01:24:33,209 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 21:24:45] 2025-06-06 01:24:33,444 | INFO     | [job] control thread has finished
[2025-06-05 21:24:45] 2025-06-06 01:24:33,714 | INFO     | [payload] validate_post thread has finished
[2025-06-05 21:24:45] 2025-06-06 01:24:33,988 | INFO     | [job] validate thread has finished
[2025-06-05 21:24:45] 2025-06-06 01:24:34,156 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 21:24:45] 2025-06-06 01:24:34,178 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 21:24:45] 2025-06-06 01:24:34,251 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 21:24:45] 2025-06-06 01:24:34,398 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 21:24:45] 2025-06-06 01:24:34,856 | INFO     | [data] copytool_out thread has finished
[2025-06-05 21:24:45] 2025-06-06 01:24:38,257 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 21:24:45] 2025-06-06 01:24:40,070 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139887632283456)>', '<ExcThread(monitor, started 139887059650304)>']
[2025-06-05 21:24:45] 2025-06-06 01:24:40,578 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 21:24:45] 2025-06-06 01:24:40,578 | INFO     | [monitor] control thread has ended
[2025-06-05 21:24:45] 2025-06-06 01:24:45,080 | INFO     | all workflow threads have been joined
[2025-06-05 21:24:45] 2025-06-06 01:24:45,080 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 21:24:45] 2025-06-06 01:24:45,080 | INFO     | traces error code: 0
[2025-06-05 21:24:45] 2025-06-06 01:24:45,081 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 21:24:45] 2025-06-06 01:24:45,172 [wrapper] ==== pilot stdout END ====
[2025-06-05 21:24:45] 2025-06-06 01:24:45,176 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 21:24:45] 2025-06-06 01:24:45,180 [wrapper] pilotpid: 934
[2025-06-05 21:24:45] 2025-06-06 01:24:45,184 [wrapper] Pilot exit status: 0
[2025-06-05 21:24:45] 2025-06-06 01:24:45,198 [wrapper] pandaids: 6669135933
[2025-06-05 21:24:45] 2025-06-06 01:24:45,235 [wrapper] cleanup supervisor_pilot 29126 935
[2025-06-05 21:24:45] 2025-06-06 01:24:45,239 [wrapper] Test setup, not cleaning
[2025-06-05 21:24:45] 2025-06-06 01:24:45,243 [wrapper] apfmon messages muted
[2025-06-05 21:24:45] 2025-06-06 01:24:45,247 [wrapper] ==== wrapper stdout END ====
[2025-06-05 21:24:45] 2025-06-06 01:24:45,251 [wrapper] ==== wrapper stderr END ====
[2025-06-05 21:24:45]  *** Error codes and diagnostics ***
[2025-06-05 21:24:45]     "exeErrorCode": 0,
[2025-06-05 21:24:45]     "exeErrorDiag": "",
[2025-06-05 21:24:45]     "pilotErrorCode": 0,
[2025-06-05 21:24:45]     "pilotErrorDiag": "",
[2025-06-05 21:24:45]  *** Listing of results directory ***
[2025-06-05 21:24:45] total 418568
[2025-06-05 21:24:45] -rw-r--r-- 1 boincer umatlas    495897 May 28 23:09 pilot3.tar.gz
[2025-06-05 21:24:45] -rwx------ 1 boincer umatlas     37140 May 28 23:15 runpilot2-wrapper.sh
[2025-06-05 21:24:45] -rw-r--r-- 1 boincer umatlas      5111 May 28 23:15 queuedata.json
[2025-06-05 21:24:45] -rw-r--r-- 1 boincer umatlas       100 Jun  5 19:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 21:24:45] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 19:49 run_atlas
[2025-06-05 21:24:45] -rw-r--r-- 1 boincer umatlas       105 Jun  5 19:49 job.xml
[2025-06-05 21:24:45] -rw-r--r-- 2 boincer umatlas 223362977 Jun  5 19:49 EVNT.44871834._003663.pool.root.1
[2025-06-05 21:24:45] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 19:49 start_atlas.sh
[2025-06-05 21:24:45] drwxrwx--x 2 boincer umatlas      4096 Jun  5 19:49 shared
[2025-06-05 21:24:45] -rw-r--r-- 2 boincer umatlas    508875 Jun  5 19:49 input.tar.gz
[2025-06-05 21:24:45] -rw-r--r-- 1 boincer umatlas         0 Jun  5 19:49 boinc_lockfile
[2025-06-05 21:24:45] -rw-r--r-- 1 boincer umatlas      2558 Jun  5 19:49 pandaJob.out
[2025-06-05 21:24:45] -rw------- 1 boincer umatlas    987721 Jun  5 19:49 agis_schedconf.cvmfs.json
[2025-06-05 21:24:45] -rw------- 1 boincer umatlas   1598969 Jun  5 19:49 agis_ddmendpoints.agis.ALL.json
[2025-06-05 21:24:45] drwx------ 4 boincer umatlas      4096 Jun  5 19:49 pilot3
[2025-06-05 21:24:45] -rw-r--r-- 1 boincer umatlas      5868 Jun  5 21:20 init_data.xml
[2025-06-05 21:24:45] -rw------- 1 boincer umatlas 199636984 Jun  5 21:23 HITS.44871837._094213.pool.root.1
[2025-06-05 21:24:45] -rw------- 1 boincer umatlas        95 Jun  5 21:24 pilot_heartbeat.json
[2025-06-05 21:24:45] -rw-r--r-- 1 boincer umatlas       530 Jun  5 21:24 boinc_task_state.xml
[2025-06-05 21:24:45] -rw------- 1 boincer umatlas      1047 Jun  5 21:24 memory_monitor_summary.json
[2025-06-05 21:24:45] -rw------- 1 boincer umatlas    361633 Jun  5 21:24 log.44871837._094213.job.log.tgz.1
[2025-06-05 21:24:45] -rw------- 1 boincer umatlas      7753 Jun  5 21:24 heartbeat.json
[2025-06-05 21:24:45] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 21:24 boinc_mmap_file
[2025-06-05 21:24:45] -rw-r--r-- 1 boincer umatlas        27 Jun  5 21:24 wrapper_checkpoint.txt
[2025-06-05 21:24:45] -rw------- 1 boincer umatlas      4668 Jun  5 21:24 pilotlog.txt
[2025-06-05 21:24:45] -rw------- 1 boincer umatlas    531316 Jun  5 21:24 log.44871837._094213.job.log.1
[2025-06-05 21:24:45] -rw------- 1 boincer umatlas       357 Jun  5 21:24 output.list
[2025-06-05 21:24:45] -rw-r--r-- 1 boincer umatlas       620 Jun  5 21:24 runtime_log
[2025-06-05 21:24:45] -rw------- 1 boincer umatlas    911360 Jun  5 21:24 result.tar.gz
[2025-06-05 21:24:45] -rw-r--r-- 1 boincer umatlas      8661 Jun  5 21:24 runtime_log.err
[2025-06-05 21:24:45] -rw------- 1 boincer umatlas       659 Jun  5 21:24 LlHMDmRvie7n9Rq4apOajLDm4fhM0noT9bVof3QYDmvXUKDm7pAm6m.diag
[2025-06-05 21:24:45] -rw-r--r-- 1 boincer umatlas     21382 Jun  5 21:24 stderr.txt
[2025-06-05 21:24:45] HITS file was successfully produced:
[2025-06-05 21:24:45] -rw------- 1 boincer umatlas 199636984 Jun  5 21:23 shared/HITS.pool.root.1
[2025-06-05 21:24:45]  *** Contents of shared directory: ***
[2025-06-05 21:24:45] total 414496
[2025-06-05 21:24:45] -rw-r--r-- 2 boincer umatlas 223362977 Jun  5 19:49 ATLAS.root_0
[2025-06-05 21:24:45] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 19:49 start_atlas.sh
[2025-06-05 21:24:45] -rw-r--r-- 2 boincer umatlas    508875 Jun  5 19:49 input.tar.gz
[2025-06-05 21:24:45] -rw------- 1 boincer umatlas 199636984 Jun  5 21:23 HITS.pool.root.1
[2025-06-05 21:24:45] -rw------- 1 boincer umatlas    911360 Jun  5 21:24 result.tar.gz
21:24:46 (29718): run_atlas exited; CPU time 62036.820591
21:24:46 (29718): called boinc_finish(0)

</stderr_txt>
]]>

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