Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:46:18 (41413): wrapper (7.7.26015): starting
19:46:18 (41413): wrapper: running run_atlas (--nthreads 10)
[2025-06-05 19:46:19] Arguments: --nthreads 10
[2025-06-05 19:46:19] Threads: 10
[2025-06-05 19:46:19] Checking for CVMFS
[2025-06-05 19:46:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 19:46:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 19:46:21] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 19:46:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 19:46:23] 2.11.2.0 39542 139316 360108 146836 3 23 11832334 18432000 9117 130560 0 104401237 99.317 165434769 35279 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 19:46:23] CVMFS is ok
[2025-06-05 19:46:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 19:46:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 19:46:23] Further information can be found at the LHC@home message board.
[2025-06-05 19:46:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 19:46:23] Checking for apptainer binary...
[2025-06-05 19:46:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 19:46:23] Running /usr/bin/apptainer --version
[2025-06-05 19:46:23] apptainer version 1.3.2-1.el7
[2025-06-05 19:46:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 19:46:56] c-211-25.aglt2.org
[2025-06-05 19:46:56] apptainer works
[2025-06-05 19:46:56] Set ATHENA_PROC_NUMBER=10
[2025-06-05 19:46:56] Set ATHENA_CORE_NUMBER=10
[2025-06-05 19:46:56] Starting ATLAS job with PandaID=6668728552
[2025-06-05 19:46:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 08:47:05]  *** The last 200 lines of the pilot log: ***
[2025-06-06 08:47:05] 2025-06-06 12:46:44,855 | INFO     | sum of deviations: 616037955605.872
[2025-06-06 08:47:05] 2025-06-06 12:46:44,855 | INFO     | mean x: 1749191257.8322148
[2025-06-06 08:47:05] 2025-06-06 12:46:44,855 | INFO     | mean y: 2550084.6469798656
[2025-06-06 08:47:05] 2025-06-06 12:46:44,855 | INFO     | -- intersect: -8402167991.433499
[2025-06-06 08:47:05] 2025-06-06 12:46:44,855 | INFO     | intersect: -8402167991.433499
[2025-06-06 08:47:05] 2025-06-06 12:46:44,856 | INFO     | chi2: 6.239196634538012
[2025-06-06 08:47:05] 2025-06-06 12:46:44,856 | INFO     | current chi2=6.239196634538012 (change=38.39595272602318 %)
[2025-06-06 08:47:05] 2025-06-06 12:46:44,857 | INFO     | sum of square deviations: 125645456501.54062
[2025-06-06 08:47:05] 2025-06-06 12:46:44,867 | INFO     | sum of deviations: 398507278708.7833
[2025-06-06 08:47:05] 2025-06-06 12:46:44,867 | INFO     | mean x: 1749191410.337838
[2025-06-06 08:47:05] 2025-06-06 12:46:44,867 | INFO     | mean y: 2563018.2648648648
[2025-06-06 08:47:05] 2025-06-06 12:46:44,867 | INFO     | -- intersect: -5545313747.704492
[2025-06-06 08:47:05] 2025-06-06 12:46:44,867 | INFO     | intersect: -5545313747.704492
[2025-06-06 08:47:05] 2025-06-06 12:46:44,868 | INFO     | chi2: 3.2980087203444786
[2025-06-06 08:47:05] 2025-06-06 12:46:44,868 | INFO     | current chi2=3.2980087203444786 (change=47.14049077908757 %)
[2025-06-06 08:47:05] 2025-06-06 12:46:44,869 | INFO     | sum of square deviations: 123115460331.69276
[2025-06-06 08:47:05] 2025-06-06 12:46:44,878 | INFO     | sum of deviations: 203367407959.48438
[2025-06-06 08:47:05] 2025-06-06 12:46:44,879 | INFO     | mean x: 1749191562.842177
[2025-06-06 08:47:05] 2025-06-06 12:46:44,879 | INFO     | mean y: 2574778.7972789113
[2025-06-06 08:47:05] 2025-06-06 12:46:44,879 | INFO     | -- intersect: -2886815011.9034452
[2025-06-06 08:47:05] 2025-06-06 12:46:44,879 | INFO     | intersect: -2886815011.9034452
[2025-06-06 08:47:05] 2025-06-06 12:46:44,880 | INFO     | chi2: 0.9842806161870925
[2025-06-06 08:47:05] 2025-06-06 12:46:44,880 | INFO     | current chi2=0.9842806161870925 (change=70.15530583302146 %)
[2025-06-06 08:47:05] 2025-06-06 12:46:44,880 | INFO     | sum of square deviations: 120619651093.31673
[2025-06-06 08:47:05] 2025-06-06 12:46:44,890 | INFO     | sum of deviations: 96442204390.67542
[2025-06-06 08:47:05] 2025-06-06 12:46:44,890 | INFO     | mean x: 1749191715.3465753
[2025-06-06 08:47:05] 2025-06-06 12:46:44,890 | INFO     | mean y: 2581303.930136986
[2025-06-06 08:47:05] 2025-06-06 12:46:44,890 | INFO     | -- intersect: -1395995987.587809
[2025-06-06 08:47:05] 2025-06-06 12:46:44,890 | INFO     | intersect: -1395995987.587809
[2025-06-06 08:47:05] 2025-06-06 12:46:44,891 | INFO     | chi2: 0.21775065923777212
[2025-06-06 08:47:05] 2025-06-06 12:46:44,891 | INFO     | current chi2=0.21775065923777212 (change=77.8771769293502 %)
[2025-06-06 08:47:05] 2025-06-06 12:46:44,892 | INFO     | sum of square deviations: 118157751327.20828
[2025-06-06 08:47:05] 2025-06-06 12:46:44,901 | INFO     | sum of deviations: 56120324038.03443
[2025-06-06 08:47:05] 2025-06-06 12:46:44,901 | INFO     | mean x: 1749191867.852414
[2025-06-06 08:47:05] 2025-06-06 12:46:44,901 | INFO     | mean y: 2583799.5517241377
[2025-06-06 08:47:05] 2025-06-06 12:46:44,901 | INFO     | -- intersect: -828214123.7832266
[2025-06-06 08:47:05] 2025-06-06 12:46:44,902 | INFO     | intersect: -828214123.7832266
[2025-06-06 08:47:05] 2025-06-06 12:46:44,902 | INFO     | chi2: 0.11783075693898286
[2025-06-06 08:47:05] 2025-06-06 12:46:44,902 | INFO     | current chi2=0.11783075693898286 (change=45.8873018564238 %)
[2025-06-06 08:47:05] 2025-06-06 12:46:44,903 | INFO     | sum of square deviations: 115729617471.2653
[2025-06-06 08:47:05] 2025-06-06 12:46:44,913 | INFO     | sum of deviations: 59326937594.654106
[2025-06-06 08:47:05] 2025-06-06 12:46:44,914 | INFO     | mean x: 1749192020.3569446
[2025-06-06 08:47:05] 2025-06-06 12:46:44,914 | INFO     | mean y: 2583597.0791666666
[2025-06-06 08:47:05] 2025-06-06 12:46:44,914 | INFO     | -- intersect: -894111718.2626443
[2025-06-06 08:47:05] 2025-06-06 12:46:44,914 | INFO     | intersect: -894111718.2626443
[2025-06-06 08:47:05] 2025-06-06 12:46:44,915 | INFO     | chi2: 0.1147717219688484
[2025-06-06 08:47:05] 2025-06-06 12:46:44,915 | INFO     | current chi2=0.1147717219688484 (change=2.5961260451874573 %)
[2025-06-06 08:47:05] 2025-06-06 12:46:44,915 | INFO     | left removable region: 70
[2025-06-06 08:47:05] 2025-06-06 12:46:44,915 | INFO     | sum of square deviations: 97062989062.0708
[2025-06-06 08:47:05] 2025-06-06 12:46:44,923 | INFO     | sum of deviations: 133218164350.70694
[2025-06-06 08:47:05] 2025-06-06 12:46:44,924 | INFO     | mean x: 1749192904.8468335
[2025-06-06 08:47:05] 2025-06-06 12:46:44,924 | INFO     | mean y: 2578283.4683357878
[2025-06-06 08:47:05] 2025-06-06 12:46:44,924 | INFO     | -- intersect: -2398174775.2486105
[2025-06-06 08:47:05] 2025-06-06 12:46:44,924 | INFO     | intersect: -2398174775.2486105
[2025-06-06 08:47:05] 2025-06-06 12:46:44,925 | INFO     | chi2: 0.03454867516578834
[2025-06-06 08:47:05] 2025-06-06 12:46:44,925 | INFO     | -- intersect: -2398174775.2486105
[2025-06-06 08:47:05] 2025-06-06 12:46:44,925 | INFO     | current memory leak: 1.37 B/s (using 679 data points, chi2=0.03)
[2025-06-06 08:47:05] 2025-06-06 12:46:44,926 | INFO     | ..............................
[2025-06-06 08:47:05] 2025-06-06 12:46:44,926 | INFO     | . Timing measurements:
[2025-06-06 08:47:05] 2025-06-06 12:46:44,926 | INFO     | . get job = 0 s
[2025-06-06 08:47:05] 2025-06-06 12:46:44,926 | INFO     | . initial setup = 27 s
[2025-06-06 08:47:05] 2025-06-06 12:46:44,926 | INFO     | . payload setup = 212 s
[2025-06-06 08:47:05] 2025-06-06 12:46:44,926 | INFO     | . stage-in = 2 s
[2025-06-06 08:47:05] 2025-06-06 12:46:44,926 | INFO     | . payload execution = 46170 s
[2025-06-06 08:47:05] 2025-06-06 12:46:44,927 | INFO     | . stage-out = 2 s
[2025-06-06 08:47:05] 2025-06-06 12:46:44,927 | INFO     | . log creation = 0 s
[2025-06-06 08:47:05] 2025-06-06 12:46:44,927 | INFO     | ..............................
[2025-06-06 08:47:05] 2025-06-06 12:46:45,201 | INFO     | 
[2025-06-06 08:47:05] 2025-06-06 12:46:45,202 | INFO     | job summary report
[2025-06-06 08:47:05] 2025-06-06 12:46:45,202 | INFO     | --------------------------------------------------
[2025-06-06 08:47:05] 2025-06-06 12:46:45,202 | INFO     | PanDA job id: 6668728552
[2025-06-06 08:47:05] 2025-06-06 12:46:45,202 | INFO     | task id: 44871837
[2025-06-06 08:47:05] 2025-06-06 12:46:45,202 | INFO     | errors: (none)
[2025-06-06 08:47:05] 2025-06-06 12:46:45,203 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 08:47:05] 2025-06-06 12:46:45,203 | INFO     | pilot state: finished 
[2025-06-06 08:47:05] 2025-06-06 12:46:45,203 | INFO     | transexitcode: 0
[2025-06-06 08:47:05] 2025-06-06 12:46:45,203 | INFO     | exeerrorcode: 0
[2025-06-06 08:47:05] 2025-06-06 12:46:45,203 | INFO     | exeerrordiag: 
[2025-06-06 08:47:05] 2025-06-06 12:46:45,203 | INFO     | exitcode: 0
[2025-06-06 08:47:05] 2025-06-06 12:46:45,204 | INFO     | exitmsg: OK
[2025-06-06 08:47:05] 2025-06-06 12:46:45,204 | INFO     | cpuconsumptiontime: 112573 s
[2025-06-06 08:47:05] 2025-06-06 12:46:45,204 | INFO     | nevents: 400
[2025-06-06 08:47:05] 2025-06-06 12:46:45,204 | INFO     | neventsw: 0
[2025-06-06 08:47:05] 2025-06-06 12:46:45,204 | INFO     | pid: 8624
[2025-06-06 08:47:05] 2025-06-06 12:46:45,205 | INFO     | pgrp: 8624
[2025-06-06 08:47:05] 2025-06-06 12:46:45,205 | INFO     | corecount: 10
[2025-06-06 08:47:05] 2025-06-06 12:46:45,205 | INFO     | event service: False
[2025-06-06 08:47:05] 2025-06-06 12:46:45,205 | INFO     | sizes: {0: 2396564, 1: 2397249, 2: 2397249, 3: 2397476, 4: 2397476, 15: 2397504, 27: 2397660, 39: 2397688, 51: 2397716, 64: 2397744, 77: 2397744, 78: 2398314, 90: 
[2025-06-06 08:47:05] 2025-06-06 12:46:45,205 | INFO     | --------------------------------------------------
[2025-06-06 08:47:05] 2025-06-06 12:46:45,205 | INFO     | 
[2025-06-06 08:47:05] 2025-06-06 12:46:45,206 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-06 08:47:05] 2025-06-06 12:46:45,228 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 08:47:05] 2025-06-06 12:46:45,228 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 08:47:05] 2025-06-06 12:46:45,228 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 08:47:05] 2025-06-06 12:46:45,229 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 08:47:05] 2025-06-06 12:46:45,229 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 08:47:05] 2025-06-06 12:46:45,229 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 08:47:05] 2025-06-06 12:46:45,229 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 08:47:05] 2025-06-06 12:46:45,229 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 08:47:05] 2025-06-06 12:46:45,229 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 08:47:05] 2025-06-06 12:46:45,230 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 08:47:05] 2025-06-06 12:46:45,230 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 08:47:05] 2025-06-06 12:46:45,230 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 08:47:05] 2025-06-06 12:46:45,230 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 08:47:05] 2025-06-06 12:46:45,230 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 08:47:05] 2025-06-06 12:46:45,231 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 08:47:05] 2025-06-06 12:46:45,231 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 08:47:05] 2025-06-06 12:46:45,231 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 08:47:05] 2025-06-06 12:46:45,231 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 08:47:05] 2025-06-06 12:46:45,231 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 08:47:05] 2025-06-06 12:46:45,231 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 08:47:05] 2025-06-06 12:46:45,232 | INFO     | job 6668728552 has completed (purged errors)
[2025-06-06 08:47:05] 2025-06-06 12:46:45,232 | INFO     | overall cleanup function is called
[2025-06-06 08:47:05] 2025-06-06 12:46:46,240 | INFO     | --- collectZombieJob: --- 10, [8624]
[2025-06-06 08:47:05] 2025-06-06 12:46:46,241 | INFO     | zombie collector waiting for pid 8624
[2025-06-06 08:47:05] 2025-06-06 12:46:46,241 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 08:47:05] 2025-06-06 12:46:46,241 | INFO     | collected zombie processes
[2025-06-06 08:47:05] 2025-06-06 12:46:46,241 | INFO     | will attempt to kill all subprocesses of pid=8624
[2025-06-06 08:47:05] 2025-06-06 12:46:46,476 | INFO     | process IDs to be killed: [8624] (in reverse order)
[2025-06-06 08:47:05] 2025-06-06 12:46:46,555 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 08:47:05] 2025-06-06 12:46:46,564 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 08:47:05] 2025-06-06 12:46:46,641 | INFO     | did not find any defunct processes belonging to 8624
[2025-06-06 08:47:05] 2025-06-06 12:46:46,713 | INFO     | did not find any defunct processes belonging to 8624
[2025-06-06 08:47:05] 2025-06-06 12:46:46,714 | INFO     | ready for new job
[2025-06-06 08:47:05] 2025-06-06 12:46:46,714 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 08:47:05] 2025-06-06 12:46:46,745 | INFO     | **************************************
[2025-06-06 08:47:05] 2025-06-06 12:46:46,746 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 08:47:05] 2025-06-06 12:46:46,746 | INFO     | **************************************
[2025-06-06 08:47:05] 2025-06-06 12:46:46,746 | INFO     | 
[2025-06-06 08:47:05] 2025-06-06 12:46:46,775 | INFO     | architecture information:
[2025-06-06 08:47:05] 2025-06-06 12:46:46,803 | INFO     | executing command: cat /etc/os-release
[2025-06-06 08:47:05] 2025-06-06 12:46:47,011 | INFO     | cat /etc/os-release:
[2025-06-06 08:47:05] NAME="CentOS Linux"
[2025-06-06 08:47:05] VERSION="7 (Core)"
[2025-06-06 08:47:05] ID="centos"
[2025-06-06 08:47:05] ID_LIKE="rhel fedora"
[2025-06-06 08:47:05] VERSION_ID="7"
[2025-06-06 08:47:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 08:47:05] ANSI_COLOR="0;31"
[2025-06-06 08:47:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 08:47:05] HOME_URL="https://www.centos.org/"
[2025-06-06 08:47:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 08:47:05] 
[2025-06-06 08:47:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 08:47:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 08:47:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 08:47:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 08:47:05] 
[2025-06-06 08:47:05] 2025-06-06 12:46:47,012 | INFO     | **************************************
[2025-06-06 08:47:05] 2025-06-06 12:46:47,516 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-06 08:47:05] 2025-06-06 12:46:47,583 | INFO     | sufficient remaining disk space (57576259584 B)
[2025-06-06 08:47:05] 2025-06-06 12:46:47,584 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 08:47:05] 2025-06-06 12:46:47,584 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 08:47:05] 2025-06-06 12:46:47,584 | INFO     | update_server=False
[2025-06-06 08:47:05] 2025-06-06 12:46:47,585 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 08:47:05] 2025-06-06 12:46:47,751 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 08:47:05] 2025-06-06 12:46:48,210 | INFO     | all data control threads have been joined
[2025-06-06 08:47:05] 2025-06-06 12:46:48,293 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 08:47:05] 2025-06-06 12:46:48,293 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 08:47:05] 2025-06-06 12:46:48,293 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 08:47:05] 2025-06-06 12:46:48,395 | INFO     | all payload control threads have been joined
[2025-06-06 08:47:05] 2025-06-06 12:46:48,573 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 08:47:05] 2025-06-06 12:46:48,574 | INFO     | aborting loop
[2025-06-06 08:47:05] 2025-06-06 12:46:48,591 | INFO     | [job] retrieve thread has finished
[2025-06-06 08:47:05] 2025-06-06 12:46:48,605 | INFO     | all job control threads have been joined
[2025-06-06 08:47:05] 2025-06-06 12:46:48,743 | INFO     | [payload] failed_post thread has finished
[2025-06-06 08:47:05] 2025-06-06 12:46:49,217 | INFO     | [data] control thread has finished
[2025-06-06 08:47:05] 2025-06-06 12:46:49,251 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 08:47:05] 2025-06-06 12:46:49,402 | INFO     | [payload] control thread has finished
[2025-06-06 08:47:05] 2025-06-06 12:46:49,422 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 08:47:05] 2025-06-06 12:46:49,474 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 08:47:05] 2025-06-06 12:46:49,580 | INFO     | [job] job monitor thread has finished
[2025-06-06 08:47:05] 2025-06-06 12:46:49,611 | INFO     | [job] control thread has finished
[2025-06-06 08:47:05] 2025-06-06 12:46:49,736 | INFO     | [data] copytool_in thread has finished
[2025-06-06 08:47:05] 2025-06-06 12:46:49,737 | INFO     | [job] validate thread has finished
[2025-06-06 08:47:05] 2025-06-06 12:46:49,756 | INFO     | [data] copytool_out thread has finished
[2025-06-06 08:47:05] 2025-06-06 12:46:49,919 | INFO     | [payload] validate_post thread has finished
[2025-06-06 08:47:05] 2025-06-06 12:46:50,001 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 08:47:05] 2025-06-06 12:46:50,063 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 08:47:05] 2025-06-06 12:46:51,068 | INFO     | [job] queue monitor thread has finished
[2025-06-06 08:47:05] 2025-06-06 12:46:53,483 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 08:47:05] 2025-06-06 12:46:58,052 | INFO     | job.realtimelogging is not enabled
[2025-06-06 08:47:05] 2025-06-06 12:46:59,058 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 08:47:05] 2025-06-06 12:46:59,161 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140704938501952)>', '<ExcThread(monitor, started 140704202356480)>']
[2025-06-06 08:47:05] 2025-06-06 12:46:59,356 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 08:47:05] 2025-06-06 12:46:59,357 | INFO     | [monitor] control thread has ended
[2025-06-06 08:47:05] 2025-06-06 12:47:04,185 | INFO     | all workflow threads have been joined
[2025-06-06 08:47:05] 2025-06-06 12:47:04,186 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 08:47:05] 2025-06-06 12:47:04,186 | INFO     | traces error code: 0
[2025-06-06 08:47:05] 2025-06-06 12:47:04,187 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 08:47:05] 2025-06-06 12:47:04,777 [wrapper] ==== pilot stdout END ====
[2025-06-06 08:47:05] 2025-06-06 12:47:04,781 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 08:47:05] 2025-06-06 12:47:04,785 [wrapper] pilotpid: 48628
[2025-06-06 08:47:05] 2025-06-06 12:47:04,788 [wrapper] Pilot exit status: 0
[2025-06-06 08:47:05] 2025-06-06 12:47:04,803 [wrapper] pandaids: 6668728552
[2025-06-06 08:47:05] 2025-06-06 12:47:04,860 [wrapper] cleanup supervisor_pilot 43758 48629
[2025-06-06 08:47:05] 2025-06-06 12:47:04,864 [wrapper] Test setup, not cleaning
[2025-06-06 08:47:05] 2025-06-06 12:47:04,869 [wrapper] apfmon messages muted
[2025-06-06 08:47:05] 2025-06-06 12:47:04,872 [wrapper] ==== wrapper stdout END ====
[2025-06-06 08:47:05] 2025-06-06 12:47:04,876 [wrapper] ==== wrapper stderr END ====
[2025-06-06 08:47:05]  *** Error codes and diagnostics ***
[2025-06-06 08:47:05]     "exeErrorCode": 0,
[2025-06-06 08:47:05]     "exeErrorDiag": "",
[2025-06-06 08:47:05]     "pilotErrorCode": 0,
[2025-06-06 08:47:05]     "pilotErrorDiag": "",
[2025-06-06 08:47:05]  *** Listing of results directory ***
[2025-06-06 08:47:05] total 426576
[2025-06-06 08:47:05] -rw-r--r-- 1 boincer umatlas    495897 May 28 13:15 pilot3.tar.gz
[2025-06-06 08:47:05] -rwx------ 1 boincer umatlas     37140 May 28 13:32 runpilot2-wrapper.sh
[2025-06-06 08:47:05] -rw-r--r-- 1 boincer umatlas      5111 May 28 13:32 queuedata.json
[2025-06-06 08:47:05] -rw-r--r-- 1 boincer umatlas       100 Jun  5 19:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 08:47:05] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 19:46 run_atlas
[2025-06-06 08:47:05] -rw-r--r-- 1 boincer umatlas       105 Jun  5 19:46 job.xml
[2025-06-06 08:47:05] -rw-r--r-- 2 boincer umatlas 224679223 Jun  5 19:46 EVNT.44871834._003423.pool.root.1
[2025-06-06 08:47:05] drwxrwx--x 2 boincer umatlas      4096 Jun  5 19:46 shared
[2025-06-06 08:47:05] -rw-r--r-- 2 boincer umatlas    508871 Jun  5 19:46 input.tar.gz
[2025-06-06 08:47:05] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 19:46 start_atlas.sh
[2025-06-06 08:47:05] -rw-r--r-- 1 boincer umatlas         0 Jun  5 19:46 boinc_lockfile
[2025-06-06 08:47:05] -rw-r--r-- 1 boincer umatlas      2559 Jun  5 19:46 pandaJob.out
[2025-06-06 08:47:05] -rw------- 1 boincer umatlas    987721 Jun  5 19:50 agis_schedconf.cvmfs.json
[2025-06-06 08:47:05] drwx------ 4 boincer umatlas      4096 Jun  5 19:50 pilot3
[2025-06-06 08:47:05] -rw-r--r-- 1 boincer umatlas      6037 Jun  6 08:37 init_data.xml
[2025-06-06 08:47:05] -rw------- 1 boincer umatlas 199613972 Jun  6 08:45 HITS.44871837._087923.pool.root.1
[2025-06-06 08:47:05] -rw------- 1 boincer umatlas        95 Jun  6 08:46 pilot_heartbeat.json
[2025-06-06 08:47:05] -rw-r--r-- 1 boincer umatlas       532 Jun  6 08:46 boinc_task_state.xml
[2025-06-06 08:47:05] -rw------- 1 boincer umatlas      1058 Jun  6 08:46 memory_monitor_summary.json
[2025-06-06 08:47:05] -rw------- 1 boincer umatlas   1598969 Jun  6 08:46 agis_ddmendpoints.agis.ALL.json
[2025-06-06 08:47:05] -rw------- 1 boincer umatlas    688177 Jun  6 08:46 log.44871837._087923.job.log.tgz.1
[2025-06-06 08:47:05] -rw------- 1 boincer umatlas      7754 Jun  6 08:46 heartbeat.json
[2025-06-06 08:47:05] -rw-r--r-- 1 boincer umatlas      8192 Jun  6 08:46 boinc_mmap_file
[2025-06-06 08:47:05] -rw-r--r-- 1 boincer umatlas        29 Jun  6 08:46 wrapper_checkpoint.txt
[2025-06-06 08:47:05] -rw------- 1 boincer umatlas      4425 Jun  6 08:47 pilotlog.txt
[2025-06-06 08:47:05] -rw------- 1 boincer umatlas   3651943 Jun  6 08:47 log.44871837._087923.job.log.1
[2025-06-06 08:47:05] -rw------- 1 boincer umatlas       357 Jun  6 08:47 output.list
[2025-06-06 08:47:05] -rw-r--r-- 1 boincer umatlas       620 Jun  6 08:47 runtime_log
[2025-06-06 08:47:05] -rw------- 1 boincer umatlas   4362240 Jun  6 08:47 result.tar.gz
[2025-06-06 08:47:05] -rw-r--r-- 1 boincer umatlas      8662 Jun  6 08:47 runtime_log.err
[2025-06-06 08:47:05] -rw------- 1 boincer umatlas       666 Jun  6 08:47 9FLLDmDpZe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmYsTKDmKS3Pvm.diag
[2025-06-06 08:47:05] -rw-r--r-- 1 boincer umatlas     20853 Jun  6 08:47 stderr.txt
[2025-06-06 08:47:05] HITS file was successfully produced:
[2025-06-06 08:47:05] -rw------- 1 boincer umatlas 199613972 Jun  6 08:45 shared/HITS.pool.root.1
[2025-06-06 08:47:05]  *** Contents of shared directory: ***
[2025-06-06 08:47:05] total 419136
[2025-06-06 08:47:05] -rw-r--r-- 2 boincer umatlas 224679223 Jun  5 19:46 ATLAS.root_0
[2025-06-06 08:47:05] -rw-r--r-- 2 boincer umatlas    508871 Jun  5 19:46 input.tar.gz
[2025-06-06 08:47:05] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 19:46 start_atlas.sh
[2025-06-06 08:47:05] -rw------- 1 boincer umatlas 199613972 Jun  6 08:45 HITS.pool.root.1
[2025-06-06 08:47:05] -rw------- 1 boincer umatlas   4362240 Jun  6 08:47 result.tar.gz
08:47:06 (41413): run_atlas exited; CPU time 113676.261249
08:47:06 (41413): called boinc_finish(0)

</stderr_txt>
]]>

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