Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:41:56 (547): wrapper (7.7.26015): starting
18:41:56 (547): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 18:41:56] Arguments: --nthreads 8
[2025-06-05 18:41:56] Threads: 8
[2025-06-05 18:41:56] Checking for CVMFS
[2025-06-05 18:41:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 18:41:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 18:41:56] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 18:41:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 18:41:56] 2.11.2.0 2979 37689 73188 146835 0 1 15042401 20275200 1 130560 0 12362161 99.981 6248166 7721 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 18:41:56] CVMFS is ok
[2025-06-05 18:41:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 18:41:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 18:41:56] Further information can be found at the LHC@home message board.
[2025-06-05 18:41:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 18:41:56] Checking for apptainer binary...
[2025-06-05 18:41:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 18:41:56] Running /usr/bin/apptainer --version
[2025-06-05 18:41:56] apptainer version 1.3.2-1.el7
[2025-06-05 18:41:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 18:41:58] c-115-8.aglt2.org
[2025-06-05 18:41:58] apptainer works
[2025-06-05 18:41:58] Set ATHENA_PROC_NUMBER=8
[2025-06-05 18:41:58] Set ATHENA_CORE_NUMBER=8
[2025-06-05 18:41:58] Starting ATLAS job with PandaID=6668689156
[2025-06-05 18:41:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 21:05:47]  *** The last 200 lines of the pilot log: ***
[2025-06-05 21:05:47] 2025-06-06 01:05:28,762 | INFO     | mean x: 1749167640.0
[2025-06-05 21:05:47] 2025-06-06 01:05:28,762 | INFO     | mean y: 2509633.290780142
[2025-06-05 21:05:47] 2025-06-06 01:05:28,762 | INFO     | -- intersect: 20946203753.78316
[2025-06-05 21:05:47] 2025-06-06 01:05:28,762 | INFO     | intersect: 20946203753.78316
[2025-06-05 21:05:47] 2025-06-06 01:05:28,763 | INFO     | chi2: 2.4071114202510175
[2025-06-05 21:05:47] 2025-06-06 01:05:28,763 | INFO     | sum of square deviations: 779958810.0
[2025-06-05 21:05:47] 2025-06-06 01:05:28,764 | INFO     | sum of deviations: -795289055.4999988
[2025-06-05 21:05:47] 2025-06-06 01:05:28,764 | INFO     | mean x: 1749167487.5
[2025-06-05 21:05:47] 2025-06-06 01:05:28,764 | INFO     | mean y: 2525603.1838235296
[2025-06-05 21:05:47] 2025-06-06 01:05:28,764 | INFO     | -- intersect: 1786073325.4605691
[2025-06-05 21:05:47] 2025-06-06 01:05:28,764 | INFO     | intersect: 1786073325.4605691
[2025-06-05 21:05:47] 2025-06-06 01:05:28,765 | INFO     | chi2: 1.6474233057344358
[2025-06-05 21:05:47] 2025-06-06 01:05:28,765 | INFO     | current chi2=1.6474233057344358 (change=31.560155800239613 %)
[2025-06-05 21:05:47] 2025-06-06 01:05:28,765 | INFO     | sum of square deviations: 697054930.0
[2025-06-05 21:05:47] 2025-06-06 01:05:28,766 | INFO     | sum of deviations: -637431639.0000005
[2025-06-05 21:05:47] 2025-06-06 01:05:28,766 | INFO     | mean x: 1749167335.0
[2025-06-05 21:05:47] 2025-06-06 01:05:28,766 | INFO     | mean y: 2525895.9160305345
[2025-06-05 21:05:47] 2025-06-06 01:05:28,766 | INFO     | -- intersect: 1602076452.4759173
[2025-06-05 21:05:47] 2025-06-06 01:05:28,766 | INFO     | intersect: 1602076452.4759173
[2025-06-05 21:05:47] 2025-06-06 01:05:28,767 | INFO     | chi2: 1.6477391863357116
[2025-06-05 21:05:47] 2025-06-06 01:05:28,767 | INFO     | current chi2=1.6477391863357116 (change=-0.01917422196081654 %)
[2025-06-05 21:05:47] 2025-06-06 01:05:28,767 | INFO     | right removable region: 130
[2025-06-05 21:05:47] 2025-06-06 01:05:28,767 | INFO     | sum of square deviations: 779958810.0
[2025-06-05 21:05:47] 2025-06-06 01:05:28,768 | INFO     | sum of deviations: -31569301421.5
[2025-06-05 21:05:47] 2025-06-06 01:05:28,769 | INFO     | sufficient remaining disk space (18598592512 B)
[2025-06-05 21:05:47] 2025-06-06 01:05:28,769 | INFO     | mean x: 1749167792.5
[2025-06-05 21:05:47] 2025-06-06 01:05:28,769 | INFO     | mean y: 2545196.375
[2025-06-05 21:05:47] 2025-06-06 01:05:28,769 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-05 21:05:47] 2025-06-06 01:05:28,770 | INFO     | -- intersect: 70801162469.78238
[2025-06-05 21:05:47] 2025-06-06 01:05:28,770 | INFO     | intersect: 70801162469.78238
[2025-06-05 21:05:47] 2025-06-06 01:05:28,770 | INFO     | chi2: 0.9270831305531528
[2025-06-05 21:05:47] 2025-06-06 01:05:28,771 | INFO     | current chi2=0.9270831305531528 (change=61.48565775752603 %)
[2025-06-05 21:05:47] 2025-06-06 01:05:28,771 | INFO     | sum of square deviations: 697054930.0
[2025-06-05 21:05:47] 2025-06-06 01:05:28,772 | INFO     | sum of deviations: -28319359250.999992
[2025-06-05 21:05:47] 2025-06-06 01:05:28,772 | INFO     | mean x: 1749167945.0
[2025-06-05 21:05:47] 2025-06-06 01:05:28,772 | INFO     | mean y: 2539181.5572519084
[2025-06-05 21:05:47] 2025-06-06 01:05:28,772 | INFO     | -- intersect: 71066257825.34964
[2025-06-05 21:05:47] 2025-06-06 01:05:28,772 | INFO     | intersect: 71066257825.34964
[2025-06-05 21:05:47] 2025-06-06 01:05:28,773 | INFO     | chi2: 0.9253828953818786
[2025-06-05 21:05:47] 2025-06-06 01:05:28,773 | INFO     | current chi2=0.9253828953818786 (change=0.18339619342008798 %)
[2025-06-05 21:05:47] 2025-06-06 01:05:28,773 | INFO     | left removable region: 20
[2025-06-05 21:05:47] 2025-06-06 01:05:28,773 | INFO     | sum of square deviations: 412686807.5
[2025-06-05 21:05:47] 2025-06-06 01:05:28,774 | INFO     | sum of deviations: -9441097886.499998
[2025-06-05 21:05:47] 2025-06-06 01:05:28,774 | INFO     | mean x: 1749167914.5
[2025-06-05 21:05:47] 2025-06-06 01:05:28,774 | INFO     | mean y: 2538660.518181818
[2025-06-05 21:05:47] 2025-06-06 01:05:28,774 | INFO     | -- intersect: 40018514942.288605
[2025-06-05 21:05:47] 2025-06-06 01:05:28,775 | INFO     | intersect: 40018514942.288605
[2025-06-05 21:05:47] 2025-06-06 01:05:28,775 | INFO     | chi2: 0.0939754393377808
[2025-06-05 21:05:47] 2025-06-06 01:05:28,775 | INFO     | -- intersect: 40018514942.288605
[2025-06-05 21:05:47] 2025-06-06 01:05:28,775 | INFO     | current memory leak: -22.88 B/s (using 110 data points, chi2=0.09)
[2025-06-05 21:05:47] 2025-06-06 01:05:28,776 | INFO     | ..............................
[2025-06-05 21:05:47] 2025-06-06 01:05:28,776 | INFO     | . Timing measurements:
[2025-06-05 21:05:47] 2025-06-06 01:05:28,776 | INFO     | . get job = 0 s
[2025-06-05 21:05:47] 2025-06-06 01:05:28,776 | INFO     | . initial setup = 3 s
[2025-06-05 21:05:47] 2025-06-06 01:05:28,776 | INFO     | . payload setup = 11 s
[2025-06-05 21:05:47] 2025-06-06 01:05:28,777 | INFO     | . stage-in = 0 s
[2025-06-05 21:05:47] 2025-06-06 01:05:28,777 | INFO     | . payload execution = 8552 s
[2025-06-05 21:05:47] 2025-06-06 01:05:28,777 | INFO     | . stage-out = 0 s
[2025-06-05 21:05:47] 2025-06-06 01:05:28,777 | INFO     | . log creation = 0 s
[2025-06-05 21:05:47] 2025-06-06 01:05:28,777 | INFO     | ..............................
[2025-06-05 21:05:47] 2025-06-06 01:05:28,840 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6668689156: 3905258 B (within 2537553920 B limit)
[2025-06-05 21:05:47] 2025-06-06 01:05:28,853 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6668689156/HITS.44871837._087294.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-05 21:05:47] 2025-06-06 01:05:28,863 | INFO     | total size of present files: 0 B (workdir size: 3905258 B)
[2025-06-05 21:05:47] 2025-06-06 01:05:28,863 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6668689156/HITS.44871837._087294.pool.root.1 since it does not exist
[2025-06-05 21:05:47] 2025-06-06 01:05:28,871 | INFO     | 
[2025-06-05 21:05:47] 2025-06-06 01:05:28,871 | INFO     | job summary report
[2025-06-05 21:05:47] 2025-06-06 01:05:28,871 | INFO     | --------------------------------------------------
[2025-06-05 21:05:47] 2025-06-06 01:05:28,871 | INFO     | PanDA job id: 6668689156
[2025-06-05 21:05:47] 2025-06-06 01:05:28,872 | INFO     | task id: 44871837
[2025-06-05 21:05:47] 2025-06-06 01:05:28,872 | INFO     | errors: (none)
[2025-06-05 21:05:47] 2025-06-06 01:05:28,872 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 21:05:47] 2025-06-06 01:05:28,872 | INFO     | pilot state: finished 
[2025-06-05 21:05:47] 2025-06-06 01:05:28,872 | INFO     | transexitcode: 0
[2025-06-05 21:05:47] 2025-06-06 01:05:28,872 | INFO     | exeerrorcode: 0
[2025-06-05 21:05:47] 2025-06-06 01:05:28,872 | INFO     | exeerrordiag: 
[2025-06-05 21:05:47] 2025-06-06 01:05:28,873 | INFO     | exitcode: 0
[2025-06-05 21:05:47] 2025-06-06 01:05:28,873 | INFO     | exitmsg: OK
[2025-06-05 21:05:47] 2025-06-06 01:05:28,874 | INFO     | cpuconsumptiontime: 64444 s
[2025-06-05 21:05:47] 2025-06-06 01:05:28,874 | INFO     | nevents: 400
[2025-06-05 21:05:47] 2025-06-06 01:05:28,874 | INFO     | neventsw: 0
[2025-06-05 21:05:47] 2025-06-06 01:05:28,874 | INFO     | pid: 10939
[2025-06-05 21:05:47] 2025-06-06 01:05:28,875 | INFO     | pgrp: 10939
[2025-06-05 21:05:47] 2025-06-06 01:05:28,875 | INFO     | corecount: 8
[2025-06-05 21:05:47] 2025-06-06 01:05:28,875 | INFO     | event service: False
[2025-06-05 21:05:47] 2025-06-06 01:05:28,875 | INFO     | sizes: {0: 2397392, 6: 2397598, 11: 2397626, 8568: 2425335, 8569: 2425334, 8570: 2434515, 8576: 2434657}
[2025-06-05 21:05:47] 2025-06-06 01:05:28,875 | INFO     | --------------------------------------------------
[2025-06-05 21:05:47] 2025-06-06 01:05:28,876 | INFO     | 
[2025-06-05 21:05:47] 2025-06-06 01:05:28,876 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 21:05:47] 2025-06-06 01:05:28,901 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 21:05:47] 2025-06-06 01:05:28,902 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 21:05:47] 2025-06-06 01:05:28,902 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 21:05:47] 2025-06-06 01:05:28,902 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 21:05:47] 2025-06-06 01:05:28,902 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 21:05:47] 2025-06-06 01:05:28,902 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 21:05:47] 2025-06-06 01:05:28,903 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 21:05:47] 2025-06-06 01:05:28,903 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 21:05:47] 2025-06-06 01:05:28,903 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 21:05:47] 2025-06-06 01:05:28,903 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 21:05:47] 2025-06-06 01:05:28,903 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 21:05:47] 2025-06-06 01:05:28,904 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 21:05:47] 2025-06-06 01:05:28,904 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 21:05:47] 2025-06-06 01:05:28,904 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 21:05:47] 2025-06-06 01:05:28,904 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 21:05:47] 2025-06-06 01:05:28,904 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 21:05:47] 2025-06-06 01:05:28,904 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 21:05:47] 2025-06-06 01:05:28,905 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 21:05:47] 2025-06-06 01:05:28,905 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 21:05:47] 2025-06-06 01:05:28,905 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 21:05:47] 2025-06-06 01:05:28,905 | INFO     | job 6668689156 has completed (purged errors)
[2025-06-05 21:05:47] 2025-06-06 01:05:28,906 | INFO     | overall cleanup function is called
[2025-06-05 21:05:47] 2025-06-06 01:05:28,968 | INFO     | number of running child processes to parent process 10939: 1
[2025-06-05 21:05:47] 2025-06-06 01:05:28,969 | INFO     | maximum number of monitored processes: 6
[2025-06-05 21:05:47] 2025-06-06 01:05:28,969 | INFO     | aborting job monitoring since job object (job id=6668689156) has expired
[2025-06-05 21:05:47] 2025-06-06 01:05:29,914 | INFO     | --- collectZombieJob: --- 10, [10939]
[2025-06-05 21:05:47] 2025-06-06 01:05:29,914 | INFO     | zombie collector waiting for pid 10939
[2025-06-05 21:05:47] 2025-06-06 01:05:29,914 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 21:05:47] 2025-06-06 01:05:29,915 | INFO     | collected zombie processes
[2025-06-05 21:05:47] 2025-06-06 01:05:29,915 | INFO     | will attempt to kill all subprocesses of pid=10939
[2025-06-05 21:05:47] 2025-06-06 01:05:30,004 | INFO     | process IDs to be killed: [10939] (in reverse order)
[2025-06-05 21:05:47] 2025-06-06 01:05:30,065 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 21:05:47] 2025-06-06 01:05:30,066 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 21:05:47] 2025-06-06 01:05:30,071 | INFO     | did not find any defunct processes belonging to 10939
[2025-06-05 21:05:47] 2025-06-06 01:05:30,074 | INFO     | did not find any defunct processes belonging to 10939
[2025-06-05 21:05:47] 2025-06-06 01:05:30,074 | INFO     | ready for new job
[2025-06-05 21:05:47] 2025-06-06 01:05:30,074 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 21:05:47] 2025-06-06 01:05:30,077 | INFO     | **************************************
[2025-06-05 21:05:47] 2025-06-06 01:05:30,077 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 21:05:47] 2025-06-06 01:05:30,077 | INFO     | **************************************
[2025-06-05 21:05:47] 2025-06-06 01:05:30,077 | INFO     | 
[2025-06-05 21:05:47] 2025-06-06 01:05:30,078 | INFO     | architecture information:
[2025-06-05 21:05:47] 2025-06-06 01:05:30,078 | INFO     | executing command: cat /etc/os-release
[2025-06-05 21:05:47] 2025-06-06 01:05:30,097 | INFO     | cat /etc/os-release:
[2025-06-05 21:05:47] NAME="CentOS Linux"
[2025-06-05 21:05:47] VERSION="7 (Core)"
[2025-06-05 21:05:47] ID="centos"
[2025-06-05 21:05:47] ID_LIKE="rhel fedora"
[2025-06-05 21:05:47] VERSION_ID="7"
[2025-06-05 21:05:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 21:05:47] ANSI_COLOR="0;31"
[2025-06-05 21:05:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 21:05:47] HOME_URL="https://www.centos.org/"
[2025-06-05 21:05:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 21:05:47] 
[2025-06-05 21:05:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 21:05:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 21:05:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 21:05:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 21:05:47] 
[2025-06-05 21:05:47] 2025-06-06 01:05:30,098 | INFO     | **************************************
[2025-06-05 21:05:47] 2025-06-06 01:05:30,601 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 21:05:47] 2025-06-06 01:05:30,621 | INFO     | sufficient remaining disk space (18603835392 B)
[2025-06-05 21:05:47] 2025-06-06 01:05:30,621 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 21:05:47] 2025-06-06 01:05:30,622 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 21:05:47] 2025-06-06 01:05:30,622 | INFO     | update_server=False
[2025-06-05 21:05:47] 2025-06-06 01:05:30,622 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 21:05:47] 2025-06-06 01:05:30,623 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 21:05:47] 2025-06-06 01:05:30,623 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 21:05:47] 2025-06-06 01:05:30,623 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 21:05:47] 2025-06-06 01:05:30,624 | INFO     | aborting loop
[2025-06-05 21:05:47] 2025-06-06 01:05:30,861 | INFO     | all payload control threads have been joined
[2025-06-05 21:05:47] 2025-06-06 01:05:30,878 | INFO     | all job control threads have been joined
[2025-06-05 21:05:47] 2025-06-06 01:05:31,081 | INFO     | all data control threads have been joined
[2025-06-05 21:05:47] 2025-06-06 01:05:31,433 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 21:05:47] 2025-06-06 01:05:31,433 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 21:05:47] 2025-06-06 01:05:31,433 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 21:05:47] 2025-06-06 01:05:31,627 | INFO     | [job] job monitor thread has finished
[2025-06-05 21:05:47] 2025-06-06 01:05:31,628 | INFO     | [job] retrieve thread has finished
[2025-06-05 21:05:47] 2025-06-06 01:05:31,629 | INFO     | [job] queue monitor thread has finished
[2025-06-05 21:05:47] 2025-06-06 01:05:31,870 | INFO     | [payload] control thread has finished
[2025-06-05 21:05:47] 2025-06-06 01:05:31,884 | INFO     | [job] control thread has finished
[2025-06-05 21:05:47] 2025-06-06 01:05:32,086 | INFO     | [data] control thread has finished
[2025-06-05 21:05:47] 2025-06-06 01:05:32,247 | INFO     | [payload] validate_post thread has finished
[2025-06-05 21:05:47] 2025-06-06 01:05:32,494 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 21:05:47] 2025-06-06 01:05:32,629 | INFO     | [data] copytool_out thread has finished
[2025-06-05 21:05:47] 2025-06-06 01:05:32,717 | INFO     | [payload] failed_post thread has finished
[2025-06-05 21:05:47] 2025-06-06 01:05:32,864 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 21:05:47] 2025-06-06 01:05:32,874 | INFO     | [job] validate thread has finished
[2025-06-05 21:05:47] 2025-06-06 01:05:32,993 | INFO     | [data] copytool_in thread has finished
[2025-06-05 21:05:47] 2025-06-06 01:05:33,074 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 21:05:47] 2025-06-06 01:05:33,142 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 21:05:47] 2025-06-06 01:05:37,148 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 21:05:47] 2025-06-06 01:05:40,710 | INFO     | job.realtimelogging is not enabled
[2025-06-05 21:05:47] 2025-06-06 01:05:41,715 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 21:05:47] 2025-06-06 01:05:42,171 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139679393843008)>', '<ExcThread(monitor, started 139678929884928)>']
[2025-06-05 21:05:47] 2025-06-06 01:05:42,488 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 21:05:47] 2025-06-06 01:05:42,488 | INFO     | [monitor] control thread has ended
[2025-06-05 21:05:47] 2025-06-06 01:05:47,184 | INFO     | all workflow threads have been joined
[2025-06-05 21:05:47] 2025-06-06 01:05:47,185 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 21:05:47] 2025-06-06 01:05:47,186 | INFO     | traces error code: 0
[2025-06-05 21:05:47] 2025-06-06 01:05:47,186 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 21:05:47] 2025-06-06 01:05:47,300 [wrapper] ==== pilot stdout END ====
[2025-06-05 21:05:47] 2025-06-06 01:05:47,305 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 21:05:47] 2025-06-06 01:05:47,309 [wrapper] pilotpid: 4433
[2025-06-05 21:05:47] 2025-06-06 01:05:47,313 [wrapper] Pilot exit status: 0
[2025-06-05 21:05:47] 2025-06-06 01:05:47,333 [wrapper] pandaids: 6668689156
[2025-06-05 21:05:47] 2025-06-06 01:05:47,376 [wrapper] cleanup supervisor_pilot 27499 4434
[2025-06-05 21:05:47] 2025-06-06 01:05:47,382 [wrapper] Test setup, not cleaning
[2025-06-05 21:05:47] 2025-06-06 01:05:47,387 [wrapper] apfmon messages muted
[2025-06-05 21:05:47] 2025-06-06 01:05:47,392 [wrapper] ==== wrapper stdout END ====
[2025-06-05 21:05:47] 2025-06-06 01:05:47,396 [wrapper] ==== wrapper stderr END ====
[2025-06-05 21:05:47]  *** Error codes and diagnostics ***
[2025-06-05 21:05:47]     "exeErrorCode": 0,
[2025-06-05 21:05:47]     "exeErrorDiag": "",
[2025-06-05 21:05:47]     "pilotErrorCode": 0,
[2025-06-05 21:05:47]     "pilotErrorDiag": "",
[2025-06-05 21:05:47]  *** Listing of results directory ***
[2025-06-05 21:05:47] total 418356
[2025-06-05 21:05:47] -rw-r--r-- 1 boincer umatlas    495897 May 28 12:21 pilot3.tar.gz
[2025-06-05 21:05:47] -rw-r--r-- 1 boincer umatlas      5111 May 28 12:41 queuedata.json
[2025-06-05 21:05:47] -rwx------ 1 boincer umatlas     37140 May 28 12:42 runpilot2-wrapper.sh
[2025-06-05 21:05:47] -rw-r--r-- 1 boincer umatlas       100 Jun  5 18:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 21:05:47] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 18:41 run_atlas
[2025-06-05 21:05:47] -rw-r--r-- 1 boincer umatlas       105 Jun  5 18:41 job.xml
[2025-06-05 21:05:47] -rw-r--r-- 2 boincer umatlas 227361760 Jun  5 18:41 EVNT.44871834._003400.pool.root.1
[2025-06-05 21:05:47] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 18:41 start_atlas.sh
[2025-06-05 21:05:47] drwxrwx--x 2 boincer umatlas      4096 Jun  5 18:41 shared
[2025-06-05 21:05:47] -rw-r--r-- 2 boincer umatlas    508878 Jun  5 18:41 input.tar.gz
[2025-06-05 21:05:47] -rw-r--r-- 1 boincer umatlas         0 Jun  5 18:41 boinc_lockfile
[2025-06-05 21:05:47] -rw-r--r-- 1 boincer umatlas      2559 Jun  5 18:41 pandaJob.out
[2025-06-05 21:05:47] -rw------- 1 boincer umatlas    987721 Jun  5 18:42 agis_schedconf.cvmfs.json
[2025-06-05 21:05:47] -rw------- 1 boincer umatlas   1598969 Jun  5 18:42 agis_ddmendpoints.agis.ALL.json
[2025-06-05 21:05:47] drwx------ 4 boincer umatlas      4096 Jun  5 18:42 pilot3
[2025-06-05 21:05:47] -rw-r--r-- 1 boincer umatlas      5823 Jun  5 21:02 init_data.xml
[2025-06-05 21:05:47] -rw------- 1 boincer umatlas 194937565 Jun  5 21:04 HITS.44871837._087294.pool.root.1
[2025-06-05 21:05:47] -rw-r--r-- 1 boincer umatlas       529 Jun  5 21:04 boinc_task_state.xml
[2025-06-05 21:05:47] -rw------- 1 boincer umatlas        95 Jun  5 21:05 pilot_heartbeat.json
[2025-06-05 21:05:47] -rw------- 1 boincer umatlas      1049 Jun  5 21:05 memory_monitor_summary.json
[2025-06-05 21:05:47] -rw------- 1 boincer umatlas    350493 Jun  5 21:05 log.44871837._087294.job.log.tgz.1
[2025-06-05 21:05:47] -rw-r--r-- 1 boincer umatlas        27 Jun  5 21:05 wrapper_checkpoint.txt
[2025-06-05 21:05:47] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 21:05 boinc_mmap_file
[2025-06-05 21:05:47] -rw------- 1 boincer umatlas      7745 Jun  5 21:05 heartbeat.json
[2025-06-05 21:05:47] -rw------- 1 boincer umatlas      4425 Jun  5 21:05 pilotlog.txt
[2025-06-05 21:05:47] -rw------- 1 boincer umatlas    779404 Jun  5 21:05 log.44871837._087294.job.log.1
[2025-06-05 21:05:47] -rw------- 1 boincer umatlas       357 Jun  5 21:05 output.list
[2025-06-05 21:05:47] -rw-r--r-- 1 boincer umatlas       620 Jun  5 21:05 runtime_log
[2025-06-05 21:05:47] -rw------- 1 boincer umatlas   1146880 Jun  5 21:05 result.tar.gz
[2025-06-05 21:05:47] -rw-r--r-- 1 boincer umatlas      8654 Jun  5 21:05 runtime_log.err
[2025-06-05 21:05:47] -rw------- 1 boincer umatlas       659 Jun  5 21:05 8qLMDmc2Ye7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmjdcKDmsvpRXm.diag
[2025-06-05 21:05:47] -rw-r--r-- 1 boincer umatlas     21108 Jun  5 21:05 stderr.txt
[2025-06-05 21:05:47] HITS file was successfully produced:
[2025-06-05 21:05:47] -rw------- 1 boincer umatlas 194937565 Jun  5 21:04 shared/HITS.pool.root.1
[2025-06-05 21:05:47]  *** Contents of shared directory: ***
[2025-06-05 21:05:47] total 414052
[2025-06-05 21:05:47] -rw-r--r-- 2 boincer umatlas 227361760 Jun  5 18:41 ATLAS.root_0
[2025-06-05 21:05:47] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 18:41 start_atlas.sh
[2025-06-05 21:05:47] -rw-r--r-- 2 boincer umatlas    508878 Jun  5 18:41 input.tar.gz
[2025-06-05 21:05:47] -rw------- 1 boincer umatlas 194937565 Jun  5 21:04 HITS.pool.root.1
[2025-06-05 21:05:47] -rw------- 1 boincer umatlas   1146880 Jun  5 21:05 result.tar.gz
21:05:49 (547): run_atlas exited; CPU time 64412.534657
21:05:49 (547): called boinc_finish(0)

</stderr_txt>
]]>

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