Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:53:18 (23028): wrapper (7.7.26015): starting
17:53:18 (23028): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 17:53:18] Arguments: --nthreads 8
[2025-06-05 17:53:18] Threads: 8
[2025-06-05 17:53:18] Checking for CVMFS
[2025-06-05 17:53:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 17:53:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 17:53:18] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 17:53:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 17:53:18] 2.11.2.0 2952 37687 100716 146833 0 1 16265046 20275201 1 130560 0 12810254 99.962 7519775 8822 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 17:53:18] CVMFS is ok
[2025-06-05 17:53:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 17:53:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 17:53:18] Further information can be found at the LHC@home message board.
[2025-06-05 17:53:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 17:53:18] Checking for apptainer binary...
[2025-06-05 17:53:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 17:53:18] Running /usr/bin/apptainer --version
[2025-06-05 17:53:18] apptainer version 1.3.2-1.el7
[2025-06-05 17:53:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 17:53:20] c-204-35.aglt2.org
[2025-06-05 17:53:20] apptainer works
[2025-06-05 17:53:20] Set ATHENA_PROC_NUMBER=8
[2025-06-05 17:53:20] Set ATHENA_CORE_NUMBER=8
[2025-06-05 17:53:20] Starting ATLAS job with PandaID=6681257570
[2025-06-05 17:53:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 19:46:56]  *** The last 200 lines of the pilot log: ***
[2025-06-05 19:46:56] 2025-06-05 23:46:23,599 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 19:46:56] 2025-06-05 23:46:23,599 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 19:46:56] 2025-06-05 23:46:23,603 | INFO     | fitting pss+swap vs Time
[2025-06-05 19:46:56] 2025-06-05 23:46:23,603 | INFO     | sum of square deviations: 424045160.0
[2025-06-05 19:46:56] 2025-06-05 23:46:23,604 | INFO     | sum of deviations: 6610866277.000001
[2025-06-05 19:46:56] 2025-06-05 23:46:23,604 | INFO     | mean x: 1749163808.0
[2025-06-05 19:46:56] 2025-06-05 23:46:23,604 | INFO     | mean y: 2432924.8018018017
[2025-06-05 19:46:56] 2025-06-05 23:46:23,605 | INFO     | -- intersect: -27267040051.27486
[2025-06-05 19:46:56] 2025-06-05 23:46:23,605 | INFO     | intersect: -27267040051.27486
[2025-06-05 19:46:56] 2025-06-05 23:46:23,605 | INFO     | chi2: 2.2670927524902313
[2025-06-05 19:46:56] 2025-06-05 23:46:23,606 | INFO     | sum of square deviations: 369281342.5
[2025-06-05 19:46:56] 2025-06-05 23:46:23,606 | INFO     | sum of deviations: 13324771436.000002
[2025-06-05 19:46:56] 2025-06-05 23:46:23,607 | INFO     | mean x: 1749163655.5
[2025-06-05 19:46:56] 2025-06-05 23:46:23,607 | INFO     | mean y: 2450886.9433962265
[2025-06-05 19:46:56] 2025-06-05 23:46:23,607 | INFO     | -- intersect: -63112586975.26798
[2025-06-05 19:46:56] 2025-06-05 23:46:23,607 | INFO     | intersect: -63112586975.26798
[2025-06-05 19:46:56] 2025-06-05 23:46:23,607 | INFO     | chi2: 1.5079338201861134
[2025-06-05 19:46:56] 2025-06-05 23:46:23,608 | INFO     | current chi2=1.5079338201861134 (change=33.486011168719884 %)
[2025-06-05 19:46:56] 2025-06-05 23:46:23,608 | INFO     | sum of square deviations: 319447850.0
[2025-06-05 19:46:56] 2025-06-05 23:46:23,608 | INFO     | sum of deviations: 12670887121.000002
[2025-06-05 19:46:56] 2025-06-05 23:46:23,608 | INFO     | mean x: 1749163503.0
[2025-06-05 19:46:56] 2025-06-05 23:46:23,609 | INFO     | mean y: 2448884.6435643565
[2025-06-05 19:46:56] 2025-06-05 23:46:23,609 | INFO     | -- intersect: -69378056580.28897
[2025-06-05 19:46:56] 2025-06-05 23:46:23,609 | INFO     | intersect: -69378056580.28897
[2025-06-05 19:46:56] 2025-06-05 23:46:23,609 | INFO     | chi2: 1.5112527023874858
[2025-06-05 19:46:56] 2025-06-05 23:46:23,609 | INFO     | current chi2=1.5112527023874858 (change=-0.22009468565156956 %)
[2025-06-05 19:46:56] 2025-06-05 23:46:23,609 | INFO     | right removable region: 100
[2025-06-05 19:46:56] 2025-06-05 23:46:23,610 | INFO     | sum of square deviations: 369281342.5
[2025-06-05 19:46:56] 2025-06-05 23:46:23,610 | INFO     | sum of deviations: -9094809213.0
[2025-06-05 19:46:56] 2025-06-05 23:46:23,610 | INFO     | mean x: 1749163960.5
[2025-06-05 19:46:56] 2025-06-05 23:46:23,610 | INFO     | mean y: 2475681.283018868
[2025-06-05 19:46:56] 2025-06-05 23:46:23,610 | INFO     | -- intersect: 43081588195.620155
[2025-06-05 19:46:56] 2025-06-05 23:46:23,611 | INFO     | intersect: 43081588195.620155
[2025-06-05 19:46:56] 2025-06-05 23:46:23,611 | INFO     | chi2: 0.8444228993417083
[2025-06-05 19:46:56] 2025-06-05 23:46:23,611 | INFO     | current chi2=0.8444228993417083 (change=62.75305020431241 %)
[2025-06-05 19:46:56] 2025-06-05 23:46:23,611 | INFO     | sum of square deviations: 319447850.0
[2025-06-05 19:46:56] 2025-06-05 23:46:23,612 | INFO     | sum of deviations: -7180036415.0
[2025-06-05 19:46:56] 2025-06-05 23:46:23,612 | INFO     | mean x: 1749164113.0
[2025-06-05 19:46:56] 2025-06-05 23:46:23,612 | INFO     | mean y: 2469638.118811881
[2025-06-05 19:46:56] 2025-06-05 23:46:23,612 | INFO     | -- intersect: 39317375113.77368
[2025-06-05 19:46:56] 2025-06-05 23:46:23,612 | INFO     | intersect: 39317375113.77368
[2025-06-05 19:46:56] 2025-06-05 23:46:23,612 | INFO     | chi2: 0.8219030949188052
[2025-06-05 19:46:56] 2025-06-05 23:46:23,612 | INFO     | current chi2=0.8219030949188052 (change=2.6668869876052663 %)
[2025-06-05 19:46:56] 2025-06-05 23:46:23,613 | INFO     | left removable region: 20
[2025-06-05 19:46:56] 2025-06-05 23:46:23,613 | INFO     | sum of square deviations: 158737860.0
[2025-06-05 19:46:56] 2025-06-05 23:46:23,613 | INFO     | sum of deviations: 496214473.5
[2025-06-05 19:46:56] 2025-06-05 23:46:23,613 | INFO     | mean x: 1749164082.5
[2025-06-05 19:46:56] 2025-06-05 23:46:23,613 | INFO     | mean y: 2487543.8375
[2025-06-05 19:46:56] 2025-06-05 23:46:23,614 | INFO     | -- intersect: -5465398531.121859
[2025-06-05 19:46:56] 2025-06-05 23:46:23,614 | INFO     | intersect: -5465398531.121859
[2025-06-05 19:46:56] 2025-06-05 23:46:23,614 | INFO     | chi2: 0.00014196079232493695
[2025-06-05 19:46:56] 2025-06-05 23:46:23,614 | INFO     | -- intersect: -5465398531.121859
[2025-06-05 19:46:56] 2025-06-05 23:46:23,614 | INFO     | current memory leak: 3.13 B/s (using 80 data points, chi2=0.00)
[2025-06-05 19:46:56] 2025-06-05 23:46:23,614 | INFO     | could have reported an average CPU frequency of 1952 MHz (7 samples)
[2025-06-05 19:46:56] 2025-06-05 23:46:23,615 | INFO     | ..............................
[2025-06-05 19:46:56] 2025-06-05 23:46:23,615 | INFO     | . Timing measurements:
[2025-06-05 19:46:56] 2025-06-05 23:46:23,615 | INFO     | . get job = 0 s
[2025-06-05 19:46:56] 2025-06-05 23:46:23,615 | INFO     | . initial setup = 2 s
[2025-06-05 19:46:56] 2025-06-05 23:46:23,615 | INFO     | . payload setup = 12 s
[2025-06-05 19:46:56] 2025-06-05 23:46:23,615 | INFO     | . stage-in = 0 s
[2025-06-05 19:46:56] 2025-06-05 23:46:23,615 | INFO     | . payload execution = 6722 s
[2025-06-05 19:46:56] 2025-06-05 23:46:23,615 | INFO     | . stage-out = 0 s
[2025-06-05 19:46:56] 2025-06-05 23:46:23,616 | INFO     | . log creation = 0 s
[2025-06-05 19:46:56] 2025-06-05 23:46:23,616 | INFO     | ..............................
[2025-06-05 19:46:56] 2025-06-05 23:46:23,709 | INFO     | 
[2025-06-05 19:46:56] 2025-06-05 23:46:23,709 | INFO     | job summary report
[2025-06-05 19:46:56] 2025-06-05 23:46:23,709 | INFO     | --------------------------------------------------
[2025-06-05 19:46:56] 2025-06-05 23:46:23,710 | INFO     | PanDA job id: 6681257570
[2025-06-05 19:46:56] 2025-06-05 23:46:23,710 | INFO     | task id: 45006595
[2025-06-05 19:46:56] 2025-06-05 23:46:23,710 | INFO     | errors: (none)
[2025-06-05 19:46:56] 2025-06-05 23:46:23,710 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 19:46:56] 2025-06-05 23:46:23,710 | INFO     | pilot state: finished 
[2025-06-05 19:46:56] 2025-06-05 23:46:23,710 | INFO     | transexitcode: 0
[2025-06-05 19:46:56] 2025-06-05 23:46:23,711 | INFO     | exeerrorcode: 0
[2025-06-05 19:46:56] 2025-06-05 23:46:23,711 | INFO     | exeerrordiag: 
[2025-06-05 19:46:56] 2025-06-05 23:46:23,711 | INFO     | exitcode: 0
[2025-06-05 19:46:56] 2025-06-05 23:46:23,711 | INFO     | exitmsg: OK
[2025-06-05 19:46:56] 2025-06-05 23:46:23,711 | INFO     | cpuconsumptiontime: 48484 s
[2025-06-05 19:46:56] 2025-06-05 23:46:23,712 | INFO     | nevents: 400
[2025-06-05 19:46:56] 2025-06-05 23:46:23,712 | INFO     | neventsw: 0
[2025-06-05 19:46:56] 2025-06-05 23:46:23,712 | INFO     | pid: 774
[2025-06-05 19:46:56] 2025-06-05 23:46:23,712 | INFO     | pgrp: 774
[2025-06-05 19:46:56] 2025-06-05 23:46:23,712 | INFO     | corecount: 8
[2025-06-05 19:46:56] 2025-06-05 23:46:23,712 | INFO     | event service: False
[2025-06-05 19:46:56] 2025-06-05 23:46:23,713 | INFO     | sizes: {0: 2397676, 6: 2397938, 11: 2397966, 6737: 2425074, 6739: 2434015, 6740: 2434071, 6748: 2434393}
[2025-06-05 19:46:56] 2025-06-05 23:46:23,713 | INFO     | --------------------------------------------------
[2025-06-05 19:46:56] 2025-06-05 23:46:23,713 | INFO     | 
[2025-06-05 19:46:56] 2025-06-05 23:46:23,713 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 19:46:56] 2025-06-05 23:46:23,740 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 19:46:56] 2025-06-05 23:46:23,741 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 19:46:56] 2025-06-05 23:46:23,741 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 19:46:56] 2025-06-05 23:46:23,741 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 19:46:56] 2025-06-05 23:46:23,742 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 19:46:56] 2025-06-05 23:46:23,742 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 19:46:56] 2025-06-05 23:46:23,742 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 19:46:56] 2025-06-05 23:46:23,742 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 19:46:56] 2025-06-05 23:46:23,742 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 19:46:56] 2025-06-05 23:46:23,743 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 19:46:56] 2025-06-05 23:46:23,743 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 19:46:56] 2025-06-05 23:46:23,743 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 19:46:56] 2025-06-05 23:46:23,743 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 19:46:56] 2025-06-05 23:46:23,743 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 19:46:56] 2025-06-05 23:46:23,743 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 19:46:56] 2025-06-05 23:46:23,744 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 19:46:56] 2025-06-05 23:46:23,744 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 19:46:56] 2025-06-05 23:46:23,744 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 19:46:56] 2025-06-05 23:46:23,744 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 19:46:56] 2025-06-05 23:46:23,744 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 19:46:56] 2025-06-05 23:46:23,745 | INFO     | job 6681257570 has completed (purged errors)
[2025-06-05 19:46:56] 2025-06-05 23:46:23,745 | INFO     | overall cleanup function is called
[2025-06-05 19:46:56] 2025-06-05 23:46:24,113 | INFO     | PID=26693 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-05 19:46:56] 2025-06-05 23:46:24,753 | INFO     | --- collectZombieJob: --- 10, [774]
[2025-06-05 19:46:56] 2025-06-05 23:46:24,753 | INFO     | zombie collector waiting for pid 774
[2025-06-05 19:46:56] 2025-06-05 23:46:24,760 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 19:46:56] 2025-06-05 23:46:24,760 | INFO     | collected zombie processes
[2025-06-05 19:46:56] 2025-06-05 23:46:24,760 | INFO     | will attempt to kill all subprocesses of pid=774
[2025-06-05 19:46:56] 2025-06-05 23:46:24,847 | INFO     | process IDs to be killed: [774] (in reverse order)
[2025-06-05 19:46:56] 2025-06-05 23:46:24,901 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 19:46:56] 2025-06-05 23:46:24,902 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 19:46:56] 2025-06-05 23:46:24,906 | INFO     | did not find any defunct processes belonging to 774
[2025-06-05 19:46:56] 2025-06-05 23:46:24,909 | INFO     | did not find any defunct processes belonging to 774
[2025-06-05 19:46:56] 2025-06-05 23:46:24,910 | INFO     | ready for new job
[2025-06-05 19:46:56] 2025-06-05 23:46:24,910 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 19:46:56] 2025-06-05 23:46:24,911 | INFO     | ***************************************
[2025-06-05 19:46:56] 2025-06-05 23:46:24,911 | INFO     | ***  PanDA Pilot version 3.10.3.82  ***
[2025-06-05 19:46:56] 2025-06-05 23:46:24,911 | INFO     | ***************************************
[2025-06-05 19:46:56] 2025-06-05 23:46:24,912 | INFO     | 
[2025-06-05 19:46:56] 2025-06-05 23:46:24,912 | INFO     | architecture information:
[2025-06-05 19:46:56] 2025-06-05 23:46:24,913 | INFO     | executing command: cat /etc/os-release
[2025-06-05 19:46:56] 2025-06-05 23:46:24,929 | INFO     | cat /etc/os-release:
[2025-06-05 19:46:56] NAME="CentOS Linux"
[2025-06-05 19:46:56] VERSION="7 (Core)"
[2025-06-05 19:46:56] ID="centos"
[2025-06-05 19:46:56] ID_LIKE="rhel fedora"
[2025-06-05 19:46:56] VERSION_ID="7"
[2025-06-05 19:46:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 19:46:56] ANSI_COLOR="0;31"
[2025-06-05 19:46:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 19:46:56] HOME_URL="https://www.centos.org/"
[2025-06-05 19:46:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 19:46:56] 
[2025-06-05 19:46:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 19:46:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 19:46:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 19:46:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 19:46:56] 
[2025-06-05 19:46:56] 2025-06-05 23:46:24,930 | INFO     | ***************************************
[2025-06-05 19:46:56] 2025-06-05 23:46:25,433 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 19:46:56] 2025-06-05 23:46:25,453 | INFO     | sufficient remaining disk space (18614321152 B)
[2025-06-05 19:46:56] 2025-06-05 23:46:25,454 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 19:46:56] 2025-06-05 23:46:25,454 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 19:46:56] 2025-06-05 23:46:25,454 | INFO     | update_server=False
[2025-06-05 19:46:56] 2025-06-05 23:46:25,455 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 19:46:56] 2025-06-05 23:46:25,455 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 19:46:56] 2025-06-05 23:46:25,456 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 19:46:56] 2025-06-05 23:46:25,702 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 19:46:56] 2025-06-05 23:46:25,702 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 19:46:56] 2025-06-05 23:46:25,703 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 19:46:56] 2025-06-05 23:46:25,703 | INFO     | will abort loop
[2025-06-05 19:46:56] 2025-06-05 23:46:25,839 | INFO     | all payload control threads have been joined
[2025-06-05 19:46:56] 2025-06-05 23:46:26,242 | INFO     | all job control threads have been joined
[2025-06-05 19:46:56] 2025-06-05 23:46:26,261 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 19:46:56] 2025-06-05 23:46:26,460 | INFO     | [job] retrieve thread has finished
[2025-06-05 19:46:56] 2025-06-05 23:46:26,461 | INFO     | [job] queue monitor thread has finished
[2025-06-05 19:46:56] 2025-06-05 23:46:26,541 | INFO     | all data control threads have been joined
[2025-06-05 19:46:56] 2025-06-05 23:46:26,708 | INFO     | [job] job monitor thread has finished
[2025-06-05 19:46:56] 2025-06-05 23:46:26,732 | INFO     | [job] validate thread has finished
[2025-06-05 19:46:56] 2025-06-05 23:46:26,769 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 19:46:56] 2025-06-05 23:46:26,845 | INFO     | [payload] control thread has finished
[2025-06-05 19:46:56] 2025-06-05 23:46:26,894 | INFO     | [payload] failed_post thread has finished
[2025-06-05 19:46:56] 2025-06-05 23:46:26,910 | INFO     | [data] copytool_in thread has finished
[2025-06-05 19:46:56] 2025-06-05 23:46:27,226 | INFO     | [payload] validate_post thread has finished
[2025-06-05 19:46:56] 2025-06-05 23:46:27,247 | INFO     | [job] control thread has finished
[2025-06-05 19:46:56] 2025-06-05 23:46:27,456 | INFO     | [data] copytool_out thread has finished
[2025-06-05 19:46:56] 2025-06-05 23:46:27,547 | INFO     | [data] control thread has finished
[2025-06-05 19:46:56] 2025-06-05 23:46:27,594 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 19:46:56] 2025-06-05 23:46:27,854 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 19:46:56] 2025-06-05 23:46:27,865 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 19:46:56] 2025-06-05 23:46:30,267 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 19:46:56] 2025-06-05 23:46:30,915 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140275652491072)>', '<ExcThread(monitor, started 140274672056064)>']
[2025-06-05 19:46:56] 2025-06-05 23:46:35,915 | INFO     | all workflow threads have been joined
[2025-06-05 19:46:56] 2025-06-05 23:46:35,916 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 19:46:56] 2025-06-05 23:46:35,916 | INFO     | traces error code: 0
[2025-06-05 19:46:56] 2025-06-05 23:46:35,917 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 19:46:56] 2025-06-05 23:46:56,242 | INFO     | PID=26693 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-05 19:46:56] 2025-06-05 23:46:56,242 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 19:46:56] 2025-06-05 23:46:56,242 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 19:46:56] 2025-06-05 23:46:56,242 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 19:46:56] 2025-06-05 23:46:56,243 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 19:46:56] 2025-06-05 23:46:56,243 | INFO     | [monitor] control thread has ended
[2025-06-05 19:46:56] 2025-06-05 23:46:56,362 [wrapper] ==== pilot stdout END ====
[2025-06-05 19:46:56] 2025-06-05 23:46:56,366 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 19:46:56] 2025-06-05 23:46:56,370 [wrapper] pilotpid: 26693
[2025-06-05 19:46:56] 2025-06-05 23:46:56,375 [wrapper] Pilot exit status: 0
[2025-06-05 19:46:56] 2025-06-05 23:46:56,394 [wrapper] pandaids: 6681257570
[2025-06-05 19:46:56] 2025-06-05 23:46:56,440 [wrapper] cleanup supervisor_pilot 10884 26694
[2025-06-05 19:46:56] 2025-06-05 23:46:56,445 [wrapper] Test setup, not cleaning
[2025-06-05 19:46:56] 2025-06-05 23:46:56,449 [wrapper] apfmon messages muted
[2025-06-05 19:46:56] 2025-06-05 23:46:56,454 [wrapper] ==== wrapper stdout END ====
[2025-06-05 19:46:56] 2025-06-05 23:46:56,458 [wrapper] ==== wrapper stderr END ====
[2025-06-05 19:46:56]  *** Error codes and diagnostics ***
[2025-06-05 19:46:56]     "exeErrorCode": 0,
[2025-06-05 19:46:56]     "exeErrorDiag": "",
[2025-06-05 19:46:56]     "pilotErrorCode": 0,
[2025-06-05 19:46:56]     "pilotErrorDiag": "",
[2025-06-05 19:46:56]  *** Listing of results directory ***
[2025-06-05 19:46:56] total 386796
[2025-06-05 19:46:56] -rwx------ 1 boincer umatlas     37140 Jun  5 17:52 runpilot2-wrapper.sh
[2025-06-05 19:46:56] -rw-r--r-- 1 boincer umatlas      5112 Jun  5 17:52 queuedata.json
[2025-06-05 19:46:56] -rw-r--r-- 1 boincer umatlas    529402 Jun  5 17:52 pilot3.tar.gz
[2025-06-05 19:46:56] -rw-r--r-- 1 boincer umatlas       100 Jun  5 17:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 19:46:56] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 17:53 run_atlas
[2025-06-05 19:46:56] -rw-r--r-- 1 boincer umatlas       105 Jun  5 17:53 job.xml
[2025-06-05 19:46:56] -rw-r--r-- 2 boincer umatlas 214172288 Jun  5 17:53 EVNT.45006593._001063.pool.root.1
[2025-06-05 19:46:56] -rw-r--r-- 2 boincer umatlas     15095 Jun  5 17:53 start_atlas.sh
[2025-06-05 19:46:56] drwxrwx--x 2 boincer umatlas      4096 Jun  5 17:53 shared
[2025-06-05 19:46:56] -rw-r--r-- 2 boincer umatlas    541901 Jun  5 17:53 input.tar.gz
[2025-06-05 19:46:56] -rw-r--r-- 1 boincer umatlas         0 Jun  5 17:53 boinc_lockfile
[2025-06-05 19:46:56] -rw-r--r-- 1 boincer umatlas      2521 Jun  5 17:53 pandaJob.out
[2025-06-05 19:46:56] -rw------- 1 boincer umatlas    987599 Jun  5 17:53 agis_schedconf.cvmfs.json
[2025-06-05 19:46:56] -rw------- 1 boincer umatlas   1598969 Jun  5 17:53 agis_ddmendpoints.agis.ALL.json
[2025-06-05 19:46:56] drwx------ 4 boincer umatlas      4096 Jun  5 17:53 pilot3
[2025-06-05 19:46:56] -rw-r--r-- 1 boincer umatlas      5905 Jun  5 19:37 init_data.xml
[2025-06-05 19:46:56] -rw------- 1 boincer umatlas 176141781 Jun  5 19:45 HITS.45006595._057118.pool.root.1
[2025-06-05 19:46:56] -rw-r--r-- 1 boincer umatlas       530 Jun  5 19:45 boinc_task_state.xml
[2025-06-05 19:46:56] -rw------- 1 boincer umatlas      1056 Jun  5 19:46 memory_monitor_summary.json
[2025-06-05 19:46:56] -rw------- 1 boincer umatlas    309399 Jun  5 19:46 log.45006595._057118.job.log.tgz.1
[2025-06-05 19:46:56] -rw------- 1 boincer umatlas        95 Jun  5 19:46 pilot_heartbeat.json
[2025-06-05 19:46:56] -rw------- 1 boincer umatlas      7777 Jun  5 19:46 heartbeat.json
[2025-06-05 19:46:56] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 19:46 boinc_mmap_file
[2025-06-05 19:46:56] -rw-r--r-- 1 boincer umatlas        27 Jun  5 19:46 wrapper_checkpoint.txt
[2025-06-05 19:46:56] -rw------- 1 boincer umatlas       745 Jun  5 19:46 pilotlog.txt
[2025-06-05 19:46:56] -rw------- 1 boincer umatlas    623755 Jun  5 19:46 log.45006595._057118.job.log.1
[2025-06-05 19:46:56] -rw------- 1 boincer umatlas       357 Jun  5 19:46 output.list
[2025-06-05 19:46:56] -rw-r--r-- 1 boincer umatlas       620 Jun  5 19:46 runtime_log
[2025-06-05 19:46:56] -rw------- 1 boincer umatlas    952320 Jun  5 19:46 result.tar.gz
[2025-06-05 19:46:56] -rw-r--r-- 1 boincer umatlas      8660 Jun  5 19:46 runtime_log.err
[2025-06-05 19:46:56] -rw------- 1 boincer umatlas       661 Jun  5 19:46 hbeLDmChXh7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmH6nKDmOYus3n.diag
[2025-06-05 19:46:56] -rw-r--r-- 1 boincer umatlas     20986 Jun  5 19:46 stderr.txt
[2025-06-05 19:46:56] HITS file was successfully produced:
[2025-06-05 19:46:56] -rw------- 1 boincer umatlas 176141781 Jun  5 19:45 shared/HITS.pool.root.1
[2025-06-05 19:46:56]  *** Contents of shared directory: ***
[2025-06-05 19:46:56] total 382656
[2025-06-05 19:46:56] -rw-r--r-- 2 boincer umatlas 214172288 Jun  5 17:53 ATLAS.root_0
[2025-06-05 19:46:56] -rw-r--r-- 2 boincer umatlas     15095 Jun  5 17:53 start_atlas.sh
[2025-06-05 19:46:56] -rw-r--r-- 2 boincer umatlas    541901 Jun  5 17:53 input.tar.gz
[2025-06-05 19:46:56] -rw------- 1 boincer umatlas 176141781 Jun  5 19:45 HITS.pool.root.1
[2025-06-05 19:46:56] -rw------- 1 boincer umatlas    952320 Jun  5 19:46 result.tar.gz
19:46:57 (23028): run_atlas exited; CPU time 48375.717710
19:46:57 (23028): called boinc_finish(0)

</stderr_txt>
]]>

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