Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-06 09:39:27 (19308): Detected: vboxwrapper 26206
2025-06-06 09:39:27 (19308): Detected: BOINC client v8.0.2
2025-06-06 09:39:28 (19308): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-06-06 09:39:28 (19308): Successfully copied 'init_data.xml' to the shared directory.
2025-06-06 09:39:28 (19308): Create VM. (boinc_d1ebf287f5714224, slot#10)
2025-06-06 09:39:29 (19308): Setting Memory Size for VM. (4800MB)
2025-06-06 09:39:29 (19308): Setting CPU Count for VM. (8)
2025-06-06 09:39:29 (19308): Setting Chipset Options for VM.
2025-06-06 09:39:30 (19308): Setting Graphics Controller Options for VM.
2025-06-06 09:39:30 (19308): Setting Boot Options for VM.
2025-06-06 09:39:30 (19308): Setting Network Configuration for NAT.
2025-06-06 09:39:31 (19308): Enabling VM Network Access.
2025-06-06 09:39:31 (19308): Disabling USB Support for VM.
2025-06-06 09:39:31 (19308): Disabling COM Port Support for VM.
2025-06-06 09:39:31 (19308): Disabling LPT Port Support for VM.
2025-06-06 09:39:32 (19308): Disabling Audio Support for VM.
2025-06-06 09:39:32 (19308): Disabling Clipboard Support for VM.
2025-06-06 09:39:32 (19308): Disabling Drag and Drop Support for VM.
2025-06-06 09:39:32 (19308): Adding storage controller(s) to VM.
2025-06-06 09:39:33 (19308): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-06 09:39:33 (19308): Adding VirtualBox Guest Additions to VM.
2025-06-06 09:39:33 (19308): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-06 09:39:34 (19308): forwarding host port 57145 to guest port 80
2025-06-06 09:39:34 (19308): Enabling remote desktop for VM.
2025-06-06 09:39:34 (19308): Required extension pack not installed, remote desktop not enabled.
2025-06-06 09:39:34 (19308): Enabling shared directory for VM.
2025-06-06 09:39:35 (19308): Starting VM using VBoxManage interface. (boinc_d1ebf287f5714224, slot#10)
2025-06-06 09:39:39 (19308): Successfully started VM. (PID = '15044')
2025-06-06 09:39:39 (19308): Reporting VM Process ID to BOINC.
2025-06-06 09:39:39 (19308): Guest Log: BIOS: VirtualBox 7.1.6
2025-06-06 09:39:39 (19308): Guest Log: CPUID EDX: 0x178bfbff
2025-06-06 09:39:39 (19308): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-06 09:39:39 (19308): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-06 09:39:39 (19308): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-06 09:39:39 (19308): Detected: Web Application Enabled (http://localhost:57145)
2025-06-06 09:39:39 (19308): Preference change detected
2025-06-06 09:39:39 (19308): Setting CPU throttle for VM. (100%)
2025-06-06 09:39:39 (19308): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-06 09:39:41 (19308): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-06 09:39:41 (19308): Guest Log: BIOS: Booting from Hard Disk...
2025-06-06 09:39:44 (19308): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-06 09:39:44 (19308): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-06 09:39:44 (19308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-06 09:39:44 (19308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-06 09:39:44 (19308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-06 09:39:44 (19308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-06 09:39:44 (19308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-06 09:39:44 (19308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-06 09:39:44 (19308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-06 09:39:44 (19308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-06 09:39:44 (19308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-06 09:39:44 (19308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-06 09:39:44 (19308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-06 09:39:44 (19308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-06 09:39:44 (19308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-06 09:39:44 (19308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-06 09:39:44 (19308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-06 09:39:44 (19308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-06 09:39:44 (19308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-06 09:39:44 (19308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-06 09:39:44 (19308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-06 09:39:44 (19308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-06 09:39:44 (19308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-06 09:39:44 (19308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-06 09:39:44 (19308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-06 09:39:44 (19308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-06 09:39:44 (19308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-06 09:39:44 (19308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-06 09:39:44 (19308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-06 09:39:44 (19308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-06 09:39:44 (19308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-06 09:39:44 (19308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-06 09:39:48 (19308): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-06 09:39:48 (19308): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-06 09:39:51 (19308): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-06 09:39:51 (19308): Guest Log: 00:00:00.000073 main     Log opened 2025-06-06T09:39:49.818851000Z
2025-06-06 09:39:51 (19308): Guest Log: 00:00:00.000132 main     OS Product: Linux
2025-06-06 09:39:51 (19308): Guest Log: 00:00:00.000152 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-06 09:39:51 (19308): Guest Log: 00:00:00.000166 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-06 09:39:51 (19308): Guest Log: 00:00:00.000180 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-06 09:39:51 (19308): Guest Log: 00:00:00.000180 main     Process ID: 1368
2025-06-06 09:39:51 (19308): Guest Log: 00:00:00.000180 main     Package type: LINUX_64BITS_GENERIC
2025-06-06 09:39:51 (19308): Guest Log: 00:00:00.000656 main     5.2.32 r132073 started. Verbose level = 0
2025-06-06 09:39:54 (19308): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-06 09:39:54 (19308): Guest Log: [INFO] Mounting shared directory
2025-06-06 09:39:54 (19308): Guest Log: [INFO] Checking for init_data.xml
2025-06-06 09:40:01 (19308): Guest Log: 00:00:10.009763 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 703 412 000ns (GuestNow=1 749 195 601 117 047 000 ns GuestLast=1 749 202 789 820 459 000 ns fSetTimeLastLoop=true )
2025-06-06 09:40:22 (19308): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-06 09:40:22 (19308): Guest Log: [INFO] Detected branch: prod
2025-06-06 09:40:24 (19308): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-06 09:40:24 (19308): Guest Log: Copying input files
2025-06-06 09:40:25 (19308): Guest Log: Copied input files into RunAtlas.
2025-06-06 09:40:25 (19308): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-06 09:40:25 (19308): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-06 09:40:25 (19308): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-06 09:40:25 (19308): Guest Log: Further information can be found at the LHC@home message board.
2025-06-06 09:40:54 (19308): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-06 09:40:57 (19308): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-06 09:40:57 (19308): Guest Log: 2.6.3.0 1677 0 32184 146847 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-06-06 09:40:58 (19308): Guest Log: copied the webapp to /var/www
2025-06-06 09:40:58 (19308): Guest Log: ATHENA_PROC_NUMBER=8
2025-06-06 09:40:58 (19308): Guest Log: ATHENA_CORE_NUMBER=8
2025-06-06 09:41:01 (19308): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-06 09:41:01 (19308): Guest Log:  *** Starting ATLAS job. (PandaID=6668440452 taskID=44871837) ***
2025-06-06 11:21:06 (19308): Status Report: Elapsed Time: '6000.000000'
2025-06-06 11:21:06 (19308): Status Report: CPU Time: '42424.625000'
2025-06-06 11:41:58 (19308): Guest Log:  *** Job finished ***
2025-06-06 11:41:58 (19308): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-06 11:41:58 (19308): Guest Log: 2025-06-06 09:41:42,874 | INFO     | [data] queue_monitor thread has finished
2025-06-06 11:41:58 (19308): Guest Log: 2025-06-06 09:41:45,576 | INFO     | job.realtimelogging is not enabled
2025-06-06 11:41:58 (19308): Guest Log: 2025-06-06 09:41:46,578 | INFO     | [payload] run_realtimelog thread has finished
2025-06-06 11:41:58 (19308): Guest Log: 2025-06-06 09:41:48,813 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140715837908800)>', '<ExcThread(monitor, started 140715258533632)>']
2025-06-06 11:41:58 (19308): Guest Log: 2025-06-06 09:41:48,822 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-06 11:41:58 (19308): Guest Log: 2025-06-06 09:41:48,822 | INFO     | [monitor] control thread has ended
2025-06-06 11:41:58 (19308): Guest Log: 2025-06-06 09:41:53,819 | INFO     | all workflow threads have been joined
2025-06-06 11:41:58 (19308): Guest Log: 2025-06-06 09:41:53,819 | INFO     | end of generic workflow (traces error code: 0)
2025-06-06 11:41:58 (19308): Guest Log: 2025-06-06 09:41:53,819 | INFO     | traces error code: 0
2025-06-06 11:41:58 (19308): Guest Log: 2025-06-06 09:41:53,819 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-06 11:41:58 (19308): Guest Log: 2025-06-06 09:41:53,937 [wrapper] ==== pilot stdout END ====
2025-06-06 11:41:58 (19308): Guest Log: 2025-06-06 09:41:53,942 [wrapper] ==== wrapper stdout RESUME ====
2025-06-06 11:41:58 (19308): Guest Log: 2025-06-06 09:41:53,946 [wrapper] pilotpid: 6053
2025-06-06 11:41:58 (19308): Guest Log: 2025-06-06 09:41:53,950 [wrapper] Pilot exit status: 0
2025-06-06 11:41:58 (19308): Guest Log: 2025-06-06 09:41:54,071 [wrapper] pandaids: 6668440452
2025-06-06 11:41:58 (19308): Guest Log: 2025-06-06 09:41:54,095 [wrapper] cleanup supervisor_pilot  3578 6054
2025-06-06 11:41:58 (19308): Guest Log: 2025-06-06 09:41:54,100 [wrapper] Test setup, not cleaning
2025-06-06 11:41:58 (19308): Guest Log: 2025-06-06 09:41:54,106 [wrapper] apfmon messages muted
2025-06-06 11:41:58 (19308): Guest Log: 2025-06-06 09:41:54,110 [wrapper] ==== wrapper stdout END ====
2025-06-06 11:41:58 (19308): Guest Log: 2025-06-06 09:41:54,114 [wrapper] ==== wrapper stderr END ====
2025-06-06 11:41:58 (19308): Guest Log:  *** Error codes and diagnostics ***
2025-06-06 11:41:58 (19308): Guest Log:     "exeErrorCode": 0,
2025-06-06 11:41:58 (19308): Guest Log:     "exeErrorDiag": "",
2025-06-06 11:41:58 (19308): Guest Log:     "pilotErrorCode": 0,
2025-06-06 11:41:58 (19308): Guest Log:     "pilotErrorDiag": "",
2025-06-06 11:41:58 (19308): Guest Log:  *** Listing of results directory ***
2025-06-06 11:41:58 (19308): Guest Log: total 191828
2025-06-06 11:41:58 (19308): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 28 11:45 pilot3.tar.gz
2025-06-06 11:41:58 (19308): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 28 12:21 queuedata.json
2025-06-06 11:41:58 (19308): Guest Log: -rwx------. 1 atlas atlas     37140 May 28 12:22 runpilot2-wrapper.sh
2025-06-06 11:41:58 (19308): Guest Log: -rwxr-xr-x. 1 atlas atlas    508880 Jun  6 07:40 input.tar.gz
2025-06-06 11:41:58 (19308): Guest Log: -rwxr-xr-x. 1 atlas atlas      8994 Jun  6 07:40 init_data.xml
2025-06-06 11:41:58 (19308): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 Jun  6 07:40 start_atlas.sh
2025-06-06 11:41:58 (19308): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  6 07:40 EVNT.44871834._003279.pool.root.1 -> /data/./ATLAS.root_0
2025-06-06 11:41:58 (19308): Guest Log: -rw-r--r--. 1 atlas atlas      2558 Jun  6 07:41 pandaJob.out
2025-06-06 11:41:58 (19308): Guest Log: -rw-------. 1 atlas atlas    987967 Jun  6 07:43 agis_schedconf.cvmfs.json
2025-06-06 11:41:58 (19308): Guest Log: -rw-------. 1 atlas atlas   1598969 Jun  6 07:43 agis_ddmendpoints.agis.ALL.json
2025-06-06 11:41:58 (19308): Guest Log: drwx------. 4 atlas atlas      4096 Jun  6 07:44 pilot3
2025-06-06 11:41:58 (19308): Guest Log: -rw-------. 1 atlas atlas        95 Jun  6 09:40 pilot_heartbeat.json
2025-06-06 11:41:58 (19308): Guest Log: -rw-------. 1 atlas atlas 190763366 Jun  6 09:41 HITS.44871837._084062.pool.root.1
2025-06-06 11:41:58 (19308): Guest Log: -rw-------. 1 atlas atlas      1025 Jun  6 09:41 memory_monitor_summary.json
2025-06-06 11:41:58 (19308): Guest Log: -rw-------. 1 atlas atlas    331228 Jun  6 09:41 log.44871837._084062.job.log.tgz.1
2025-06-06 11:41:58 (19308): Guest Log: -rw-------. 1 atlas atlas      7678 Jun  6 09:41 heartbeat.json
2025-06-06 11:41:58 (19308): Guest Log: -rw-------. 1 atlas atlas      4608 Jun  6 09:41 pilotlog.txt
2025-06-06 11:41:58 (19308): Guest Log: -rw-------. 1 atlas atlas    618306 Jun  6 09:41 log.44871837._084062.job.log.1
2025-06-06 11:41:58 (19308): Guest Log: -rw-------. 1 atlas atlas       357 Jun  6 09:41 output.list
2025-06-06 11:41:58 (19308): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  6 09:41 runtime_log
2025-06-06 11:41:58 (19308): Guest Log: -rw-------. 1 atlas atlas    972800 Jun  6 09:41 result.tar.gz
2025-06-06 11:41:58 (19308): Guest Log: -rw-------. 1 atlas atlas       643 Jun  6 09:41 V08NDmyyUe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmaTTKDmPTmjAn.diag
2025-06-06 11:41:58 (19308): Guest Log: -rw-r--r--. 1 atlas atlas      8555 Jun  6 09:41 runtime_log.err
2025-06-06 11:41:58 (19308): Guest Log: Looking for outputfile HITS.44871837._084062.pool.root.1
2025-06-06 11:41:58 (19308): Guest Log: HITS file was successfully produced
2025-06-06 11:41:58 (19308): Guest Log: -rw-------. 1 atlas atlas 190763366 Jun  6 09:41 /home/atlas/RunAtlas/HITS.44871837._084062.pool.root.1
2025-06-06 11:41:59 (19308): Guest Log: Successfully finished the ATLAS job!
2025-06-06 11:41:59 (19308): Guest Log: Copying the results back to the shared directory!
2025-06-06 11:41:59 (19308): Guest Log:  *** Contents of shared directory: ***
2025-06-06 11:41:59 (19308): Guest Log: total 408808
2025-06-06 11:41:59 (19308): Guest Log: -rwxrwxrwx. 1 root root 226336295 Jun  6 07:39 ATLAS.root_0
2025-06-06 11:41:59 (19308): Guest Log: -rwxrwxrwx. 1 root root 190763366 Jun  6  2025 HITS.pool.root.1
2025-06-06 11:41:59 (19308): Guest Log: -rwxrwxrwx. 1 root root      8994 Jun  6 07:39 init_data.xml
2025-06-06 11:41:59 (19308): Guest Log: -rwxrwxrwx. 1 root root    508880 Jun  5 21:35 input.tar.gz
2025-06-06 11:41:59 (19308): Guest Log: -rwxrwxrwx. 1 root root    972800 Jun  6  2025 result.tar.gz
2025-06-06 11:41:59 (19308): Guest Log: -rwxrwxrwx. 1 root root     15093 Jun  5 21:35 start_atlas.sh
2025-06-06 11:41:59 (19308): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-06 11:41:59 (19308): VM Completion File Detected.
2025-06-06 11:41:59 (19308): Powering off VM.
2025-06-06 11:41:59 (19308): Successfully stopped VM.
2025-06-06 11:41:59 (19308): Deregistering VM. (boinc_d1ebf287f5714224, slot#10)
2025-06-06 11:41:59 (19308): Removing network bandwidth throttle group from VM.
2025-06-06 11:41:59 (19308): Removing VM from VirtualBox.
11:42:04 (19308): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN