Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:19:47 (8322): wrapper (7.7.26015): starting
23:19:47 (8322): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 23:19:47] Arguments: --nthreads 8
[2025-06-05 23:19:47] Threads: 8
[2025-06-05 23:19:47] Checking for CVMFS
[2025-06-05 23:19:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 23:19:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 23:19:49] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 23:19:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 23:19:50] 2.11.2.0 26432 35168 93992 146833 2 10 20084430 25165825 3517 130560 0 18089462 99.771 21443006 2170 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 23:19:50] CVMFS is ok
[2025-06-05 23:19:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 23:19:50] Checking for apptainer binary...
[2025-06-05 23:19:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 23:19:50] Running /usr/bin/apptainer --version
[2025-06-05 23:19:50] apptainer version 1.3.2-1.el7
[2025-06-05 23:19:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 23:45:29] cg-vwn331.simple-grid.lan
[2025-06-05 23:45:29] apptainer works
[2025-06-05 23:45:29] Set ATHENA_PROC_NUMBER=8
[2025-06-05 23:45:29] Set ATHENA_CORE_NUMBER=8
[2025-06-05 23:45:29] Starting ATLAS job with PandaID=6668687045
[2025-06-05 23:45:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 05:36:23]  *** The last 200 lines of the pilot log: ***
[2025-06-06 05:36:23] 2025-06-06 03:35:36,995 | INFO     | mean x: 1749170706.5
[2025-06-06 05:36:23] 2025-06-06 03:35:36,995 | INFO     | mean y: 2451462.563253012
[2025-06-06 05:36:23] 2025-06-06 03:35:36,995 | INFO     | -- intersect: -33784610203.994858
[2025-06-06 05:36:23] 2025-06-06 03:35:36,995 | INFO     | intersect: -33784610203.994858
[2025-06-06 05:36:23] 2025-06-06 03:35:36,996 | INFO     | chi2: 6.818578836523471
[2025-06-06 05:36:23] 2025-06-06 03:35:36,996 | INFO     | sum of square deviations: 10842205148.0
[2025-06-06 05:36:23] 2025-06-06 03:35:37,000 | INFO     | sum of deviations: 215736457273.99997
[2025-06-06 05:36:23] 2025-06-06 03:35:37,000 | INFO     | mean x: 1749170554.0
[2025-06-06 05:36:23] 2025-06-06 03:35:37,000 | INFO     | mean y: 2450421.6880733944
[2025-06-06 05:36:23] 2025-06-06 03:35:37,000 | INFO     | -- intersect: -34802264425.23302
[2025-06-06 05:36:23] 2025-06-06 03:35:37,000 | INFO     | intersect: -34802264425.23302
[2025-06-06 05:36:23] 2025-06-06 03:35:37,001 | INFO     | chi2: 6.823250266821034
[2025-06-06 05:36:23] 2025-06-06 03:35:37,001 | INFO     | current chi2=6.823250266821034 (change=-0.06851032171895789 %)
[2025-06-06 05:36:23] 2025-06-06 03:35:37,001 | INFO     | right removable region: 326
[2025-06-06 05:36:23] 2025-06-06 03:35:37,002 | INFO     | sum of square deviations: 10842205148.0
[2025-06-06 05:36:23] 2025-06-06 03:35:37,005 | INFO     | sum of deviations: 102382925454.0
[2025-06-06 05:36:23] 2025-06-06 03:35:37,005 | INFO     | mean x: 1749170859.0
[2025-06-06 05:36:23] 2025-06-06 03:35:37,005 | INFO     | mean y: 2486717.6574923545
[2025-06-06 05:36:23] 2025-06-06 03:35:37,005 | INFO     | -- intersect: -16514930838.893814
[2025-06-06 05:36:23] 2025-06-06 03:35:37,006 | INFO     | intersect: -16514930838.893814
[2025-06-06 05:36:23] 2025-06-06 03:35:37,006 | INFO     | chi2: 1.975694737605073
[2025-06-06 05:36:23] 2025-06-06 03:35:37,006 | INFO     | current chi2=1.975694737605073 (change=71.02483105390914 %)
[2025-06-06 05:36:23] 2025-06-06 03:35:37,007 | INFO     | sum of square deviations: 10352419220.5
[2025-06-06 05:36:23] 2025-06-06 03:35:37,017 | INFO     | sum of deviations: 30486811037.5
[2025-06-06 05:36:23] 2025-06-06 03:35:37,018 | INFO     | mean x: 1749171011.5
[2025-06-06 05:36:23] 2025-06-06 03:35:37,018 | INFO     | mean y: 2509036.444099379
[2025-06-06 05:36:23] 2025-06-06 03:35:37,018 | INFO     | -- intersect: -5148619889.466773
[2025-06-06 05:36:23] 2025-06-06 03:35:37,018 | INFO     | intersect: -5148619889.466773
[2025-06-06 05:36:23] 2025-06-06 03:35:37,018 | INFO     | chi2: 0.05314937868453303
[2025-06-06 05:36:23] 2025-06-06 03:35:37,019 | INFO     | current chi2=0.05314937868453303 (change=97.30983852551228 %)
[2025-06-06 05:36:23] 2025-06-06 03:35:37,019 | INFO     | sum of square deviations: 9877610318.0
[2025-06-06 05:36:23] 2025-06-06 03:35:37,022 | INFO     | sum of deviations: 20560995439.000004
[2025-06-06 05:36:23] 2025-06-06 03:35:37,023 | INFO     | mean x: 1749171164.0
[2025-06-06 05:36:23] 2025-06-06 03:35:37,023 | INFO     | mean y: 2512226.3280757098
[2025-06-06 05:36:23] 2025-06-06 03:35:37,023 | INFO     | -- intersect: -3638520287.3251247
[2025-06-06 05:36:23] 2025-06-06 03:35:37,023 | INFO     | intersect: -3638520287.3251247
[2025-06-06 05:36:23] 2025-06-06 03:35:37,024 | INFO     | chi2: 0.0117879807054963
[2025-06-06 05:36:23] 2025-06-06 03:35:37,024 | INFO     | current chi2=0.0117879807054963 (change=77.82103761651928 %)
[2025-06-06 05:36:23] 2025-06-06 03:35:37,024 | INFO     | sum of square deviations: 9417545878.0
[2025-06-06 05:36:23] 2025-06-06 03:35:37,027 | INFO     | sum of deviations: 17200942290.5
[2025-06-06 05:36:23] 2025-06-06 03:35:37,028 | INFO     | mean x: 1749171316.5
[2025-06-06 05:36:23] 2025-06-06 03:35:37,028 | INFO     | mean y: 2513341.157051282
[2025-06-06 05:36:23] 2025-06-06 03:35:37,028 | INFO     | -- intersect: -3192309945.1940694
[2025-06-06 05:36:23] 2025-06-06 03:35:37,028 | INFO     | intersect: -3192309945.1940694
[2025-06-06 05:36:23] 2025-06-06 03:35:37,029 | INFO     | chi2: 0.009482927523423746
[2025-06-06 05:36:23] 2025-06-06 03:35:37,029 | INFO     | current chi2=0.009482927523423746 (change=19.554266669250598 %)
[2025-06-06 05:36:23] 2025-06-06 03:35:37,029 | INFO     | left removable region: 40
[2025-06-06 05:36:23] 2025-06-06 03:35:37,029 | INFO     | sum of square deviations: 7253894147.5
[2025-06-06 05:36:23] 2025-06-06 03:35:37,032 | INFO     | sum of deviations: 6325675416.999999
[2025-06-06 05:36:23] 2025-06-06 03:35:37,032 | INFO     | mean x: 1749171743.5
[2025-06-06 05:36:23] 2025-06-06 03:35:37,033 | INFO     | mean y: 2517128.6643356644
[2025-06-06 05:36:23] 2025-06-06 03:35:37,033 | INFO     | -- intersect: -1522828082.194902
[2025-06-06 05:36:23] 2025-06-06 03:35:37,033 | INFO     | intersect: -1522828082.194902
[2025-06-06 05:36:23] 2025-06-06 03:35:37,033 | INFO     | chi2: 0.0023650120509805563
[2025-06-06 05:36:23] 2025-06-06 03:35:37,033 | INFO     | -- intersect: -1522828082.194902
[2025-06-06 05:36:23] 2025-06-06 03:35:37,034 | INFO     | current memory leak: 0.87 B/s (using 286 data points, chi2=0.00)
[2025-06-06 05:36:23] 2025-06-06 03:35:37,035 | INFO     | ..............................
[2025-06-06 05:36:23] 2025-06-06 03:35:37,035 | INFO     | . Timing measurements:
[2025-06-06 05:36:23] 2025-06-06 03:35:37,035 | INFO     | . get job = 0 s
[2025-06-06 05:36:23] 2025-06-06 03:35:37,035 | INFO     | . initial setup = 10 s
[2025-06-06 05:36:23] 2025-06-06 03:35:37,035 | INFO     | . payload setup = 153 s
[2025-06-06 05:36:23] 2025-06-06 03:35:37,035 | INFO     | . stage-in = 0 s
[2025-06-06 05:36:23] 2025-06-06 03:35:37,035 | INFO     | . payload execution = 20390 s
[2025-06-06 05:36:23] 2025-06-06 03:35:37,035 | INFO     | . stage-out = 2 s
[2025-06-06 05:36:23] 2025-06-06 03:35:37,035 | INFO     | . log creation = 0 s
[2025-06-06 05:36:23] 2025-06-06 03:35:37,036 | INFO     | ..............................
[2025-06-06 05:36:23] 2025-06-06 03:35:37,158 | INFO     | 
[2025-06-06 05:36:23] 2025-06-06 03:35:37,158 | INFO     | job summary report
[2025-06-06 05:36:23] 2025-06-06 03:35:37,158 | INFO     | --------------------------------------------------
[2025-06-06 05:36:23] 2025-06-06 03:35:37,158 | INFO     | PanDA job id: 6668687045
[2025-06-06 05:36:23] 2025-06-06 03:35:37,158 | INFO     | task id: 44871837
[2025-06-06 05:36:23] 2025-06-06 03:35:37,158 | INFO     | errors: (none)
[2025-06-06 05:36:23] 2025-06-06 03:35:37,159 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 05:36:23] 2025-06-06 03:35:37,159 | INFO     | pilot state: finished 
[2025-06-06 05:36:23] 2025-06-06 03:35:37,159 | INFO     | transexitcode: 0
[2025-06-06 05:36:23] 2025-06-06 03:35:37,159 | INFO     | exeerrorcode: 0
[2025-06-06 05:36:23] 2025-06-06 03:35:37,159 | INFO     | exeerrordiag: 
[2025-06-06 05:36:23] 2025-06-06 03:35:37,159 | INFO     | exitcode: 0
[2025-06-06 05:36:23] 2025-06-06 03:35:37,159 | INFO     | exitmsg: OK
[2025-06-06 05:36:23] 2025-06-06 03:35:37,159 | INFO     | cpuconsumptiontime: 74879 s
[2025-06-06 05:36:23] 2025-06-06 03:35:37,159 | INFO     | nevents: 400
[2025-06-06 05:36:23] 2025-06-06 03:35:37,159 | INFO     | neventsw: 0
[2025-06-06 05:36:23] 2025-06-06 03:35:37,159 | INFO     | pid: 7402
[2025-06-06 05:36:23] 2025-06-06 03:35:37,160 | INFO     | pgrp: 7402
[2025-06-06 05:36:23] 2025-06-06 03:35:37,160 | INFO     | corecount: 8
[2025-06-06 05:36:23] 2025-06-06 03:35:37,160 | INFO     | event service: False
[2025-06-06 05:36:23] 2025-06-06 03:35:37,160 | INFO     | sizes: {0: 2396564, 1: 2397420, 2: 2397448, 13: 2397448, 23: 2397504, 34: 2397532, 45: 2397688, 56: 2397716, 66: 2397744, 77: 2397772, 81: 2398034, 88: 2398342, 20
[2025-06-06 05:36:23] 2025-06-06 03:35:37,160 | INFO     | --------------------------------------------------
[2025-06-06 05:36:23] 2025-06-06 03:35:37,160 | INFO     | 
[2025-06-06 05:36:23] 2025-06-06 03:35:37,160 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-06-06 05:36:23] 2025-06-06 03:35:37,678 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 05:36:23] 2025-06-06 03:35:37,678 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 05:36:23] 2025-06-06 03:35:37,678 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 05:36:23] 2025-06-06 03:35:37,679 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 05:36:23] 2025-06-06 03:35:37,679 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 05:36:23] 2025-06-06 03:35:37,679 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 05:36:23] 2025-06-06 03:35:37,679 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 05:36:23] 2025-06-06 03:35:37,679 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 05:36:23] 2025-06-06 03:35:37,679 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 05:36:23] 2025-06-06 03:35:37,679 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 05:36:23] 2025-06-06 03:35:37,679 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 05:36:23] 2025-06-06 03:35:37,679 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 05:36:23] 2025-06-06 03:35:37,679 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 05:36:23] 2025-06-06 03:35:37,679 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 05:36:23] 2025-06-06 03:35:37,679 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 05:36:23] 2025-06-06 03:35:37,680 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 05:36:23] 2025-06-06 03:35:37,680 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 05:36:23] 2025-06-06 03:35:37,680 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 05:36:23] 2025-06-06 03:35:37,680 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 05:36:23] 2025-06-06 03:35:37,680 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 05:36:23] 2025-06-06 03:35:37,680 | INFO     | job 6668687045 has completed (purged errors)
[2025-06-06 05:36:23] 2025-06-06 03:35:37,680 | INFO     | overall cleanup function is called
[2025-06-06 05:36:23] 2025-06-06 03:35:38,688 | INFO     | --- collectZombieJob: --- 10, [7402]
[2025-06-06 05:36:23] 2025-06-06 03:35:38,689 | INFO     | zombie collector waiting for pid 7402
[2025-06-06 05:36:23] 2025-06-06 03:35:38,689 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 05:36:23] 2025-06-06 03:35:38,689 | INFO     | collected zombie processes
[2025-06-06 05:36:23] 2025-06-06 03:35:38,689 | INFO     | will attempt to kill all subprocesses of pid=7402
[2025-06-06 05:36:23] 2025-06-06 03:35:38,834 | INFO     | process IDs to be killed: [7402] (in reverse order)
[2025-06-06 05:36:23] 2025-06-06 03:35:39,909 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 05:36:23] 2025-06-06 03:35:39,910 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 05:36:23] 2025-06-06 03:35:39,913 | INFO     | did not find any defunct processes belonging to 7402
[2025-06-06 05:36:23] 2025-06-06 03:35:39,916 | INFO     | did not find any defunct processes belonging to 7402
[2025-06-06 05:36:23] 2025-06-06 03:35:39,917 | INFO     | ready for new job
[2025-06-06 05:36:23] 2025-06-06 03:35:39,917 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 05:36:23] 2025-06-06 03:35:39,919 | INFO     | **************************************
[2025-06-06 05:36:23] 2025-06-06 03:35:39,920 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 05:36:23] 2025-06-06 03:35:39,920 | INFO     | **************************************
[2025-06-06 05:36:23] 2025-06-06 03:35:39,920 | INFO     | 
[2025-06-06 05:36:23] 2025-06-06 03:35:39,920 | INFO     | pilot is running in a VM
[2025-06-06 05:36:23] 2025-06-06 03:35:39,921 | INFO     | architecture information:
[2025-06-06 05:36:23] 2025-06-06 03:35:39,926 | INFO     | executing command: cat /etc/os-release
[2025-06-06 05:36:23] 2025-06-06 03:35:40,229 | INFO     | cat /etc/os-release:
[2025-06-06 05:36:23] NAME="CentOS Linux"
[2025-06-06 05:36:23] VERSION="7 (Core)"
[2025-06-06 05:36:23] ID="centos"
[2025-06-06 05:36:23] ID_LIKE="rhel fedora"
[2025-06-06 05:36:23] VERSION_ID="7"
[2025-06-06 05:36:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 05:36:23] ANSI_COLOR="0;31"
[2025-06-06 05:36:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 05:36:23] HOME_URL="https://www.centos.org/"
[2025-06-06 05:36:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 05:36:23] 
[2025-06-06 05:36:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 05:36:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 05:36:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 05:36:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 05:36:23] 
[2025-06-06 05:36:23] 2025-06-06 03:35:40,230 | INFO     | **************************************
[2025-06-06 05:36:23] 2025-06-06 03:35:40,733 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-06-06 05:36:23] 2025-06-06 03:35:40,943 | INFO     | sufficient remaining disk space (469705424896 B)
[2025-06-06 05:36:23] 2025-06-06 03:35:40,943 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 05:36:23] 2025-06-06 03:35:40,943 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 05:36:23] 2025-06-06 03:35:40,943 | INFO     | update_server=False
[2025-06-06 05:36:23] 2025-06-06 03:35:40,943 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 05:36:23] 2025-06-06 03:35:40,944 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 05:36:23] 2025-06-06 03:35:40,945 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 05:36:23] 2025-06-06 03:35:40,945 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 05:36:23] 2025-06-06 03:35:40,945 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 05:36:23] 2025-06-06 03:35:40,946 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 05:36:23] 2025-06-06 03:35:40,946 | INFO     | aborting loop
[2025-06-06 05:36:23] 2025-06-06 03:35:40,946 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 05:36:23] 2025-06-06 03:35:40,947 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 05:36:23] 2025-06-06 03:35:41,591 | INFO     | all data control threads have been joined
[2025-06-06 05:36:23] 2025-06-06 03:35:41,834 | INFO     | all payload control threads have been joined
[2025-06-06 05:36:23] 2025-06-06 03:35:41,950 | INFO     | [job] retrieve thread has finished
[2025-06-06 05:36:23] 2025-06-06 03:35:41,952 | INFO     | [job] job monitor thread has finished
[2025-06-06 05:36:23] 2025-06-06 03:35:42,049 | INFO     | [payload] validate_post thread has finished
[2025-06-06 05:36:23] 2025-06-06 03:35:42,074 | INFO     | [payload] failed_post thread has finished
[2025-06-06 05:36:23] 2025-06-06 03:35:42,173 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 05:36:23] 2025-06-06 03:35:42,240 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 05:36:23] 2025-06-06 03:35:42,454 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 05:36:23] 2025-06-06 03:35:42,492 | INFO     | all job control threads have been joined
[2025-06-06 05:36:23] 2025-06-06 03:35:42,597 | INFO     | [data] control thread has finished
[2025-06-06 05:36:23] 2025-06-06 03:35:42,669 | INFO     | [job] validate thread has finished
[2025-06-06 05:36:23] 2025-06-06 03:35:42,778 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 05:36:23] 2025-06-06 03:35:42,825 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 05:36:23] 2025-06-06 03:35:42,841 | INFO     | [payload] control thread has finished
[2025-06-06 05:36:23] 2025-06-06 03:35:42,954 | INFO     | [data] copytool_out thread has finished
[2025-06-06 05:36:23] 2025-06-06 03:35:43,078 | INFO     | [data] copytool_in thread has finished
[2025-06-06 05:36:23] 2025-06-06 03:35:43,179 | INFO     | [job] queue monitor thread has finished
[2025-06-06 05:36:23] 2025-06-06 03:35:43,499 | INFO     | [job] control thread has finished
[2025-06-06 05:36:23] 2025-06-06 03:35:44,959 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 05:36:23] 2025-06-06 03:35:46,720 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140674785609536)>', '<ExcThread(monitor, started 140674489882368)>']
[2025-06-06 05:36:23] 2025-06-06 03:35:46,980 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 05:36:23] 2025-06-06 03:35:46,981 | INFO     | [monitor] control thread has ended
[2025-06-06 05:36:23] 2025-06-06 03:35:51,745 | INFO     | all workflow threads have been joined
[2025-06-06 05:36:23] 2025-06-06 03:35:51,746 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 05:36:23] 2025-06-06 03:35:51,746 | INFO     | traces error code: 0
[2025-06-06 05:36:23] 2025-06-06 03:35:51,746 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 05:36:23] 2025-06-06 03:35:52,209 [wrapper] ==== pilot stdout END ====
[2025-06-06 05:36:23] 2025-06-06 03:35:52,300 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 05:36:23] 2025-06-06 03:35:52,386 [wrapper] pilotpid: 29164
[2025-06-06 05:36:23] 2025-06-06 03:35:52,456 [wrapper] Pilot exit status: 0
[2025-06-06 05:36:23] 2025-06-06 03:35:52,576 [wrapper] pandaids: 6668687045
[2025-06-06 05:36:23] 2025-06-06 03:35:52,678 [wrapper] cleanup supervisor_pilot 17447 29165
[2025-06-06 05:36:23] 2025-06-06 03:35:52,700 [wrapper] Test setup, not cleaning
[2025-06-06 05:36:23] 2025-06-06 03:35:52,714 [wrapper] apfmon messages muted
[2025-06-06 05:36:23] 2025-06-06 03:35:52,724 [wrapper] ==== wrapper stdout END ====
[2025-06-06 05:36:23] 2025-06-06 03:35:52,736 [wrapper] ==== wrapper stderr END ====
[2025-06-06 05:36:23]  *** Error codes and diagnostics ***
[2025-06-06 05:36:23]     "exeErrorCode": 0,
[2025-06-06 05:36:23]     "exeErrorDiag": "",
[2025-06-06 05:36:23]     "pilotErrorCode": 0,
[2025-06-06 05:36:23]     "pilotErrorDiag": "",
[2025-06-06 05:36:23]  *** Listing of results directory ***
[2025-06-06 05:36:23] total 424968
[2025-06-06 05:36:23] -rw-r--r--. 1 boinc boinc    495897 May 28 17:15 pilot3.tar.gz
[2025-06-06 05:36:23] -rwx------. 1 boinc boinc     37140 May 28 17:35 runpilot2-wrapper.sh
[2025-06-06 05:36:23] -rw-r--r--. 1 boinc boinc      5111 May 28 17:35 queuedata.json
[2025-06-06 05:36:23] -rw-r--r--. 1 boinc boinc       100 Jun  5 23:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 05:36:23] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 23:19 run_atlas
[2025-06-06 05:36:23] -rw-r--r--. 1 boinc boinc       105 Jun  5 23:19 job.xml
[2025-06-06 05:36:23] -rw-r--r--. 1 boinc boinc      6390 Jun  5 23:19 init_data.xml
[2025-06-06 05:36:23] -rw-r--r--. 2 boinc boinc 223069245 Jun  5 23:19 EVNT.44871834._003366.pool.root.1
[2025-06-06 05:36:23] -rw-r--r--. 2 boinc boinc     15093 Jun  5 23:19 start_atlas.sh
[2025-06-06 05:36:23] drwxrwx--x. 2 boinc boinc        68 Jun  5 23:19 shared
[2025-06-06 05:36:23] -rw-r--r--. 2 boinc boinc    508878 Jun  5 23:19 input.tar.gz
[2025-06-06 05:36:23] -rw-r--r--. 1 boinc boinc         0 Jun  5 23:19 boinc_lockfile
[2025-06-06 05:36:23] -rw-r--r--. 1 boinc boinc      2559 Jun  5 23:45 pandaJob.out
[2025-06-06 05:36:23] -rw-------. 1 boinc boinc    987599 Jun  5 23:48 agis_schedconf.cvmfs.json
[2025-06-06 05:36:23] drwx------. 4 boinc boinc      4096 Jun  5 23:48 pilot3
[2025-06-06 05:36:23] -rw-------. 1 boinc boinc 203872704 Jun  6 05:33 HITS.44871837._086438.pool.root.1
[2025-06-06 05:36:23] -rw-r--r--. 1 boinc boinc       530 Jun  6 05:33 boinc_task_state.xml
[2025-06-06 05:36:23] -rw-------. 1 boinc boinc      1020 Jun  6 05:34 memory_monitor_summary.json
[2025-06-06 05:36:23] -rw-------. 1 boinc boinc   1598969 Jun  6 05:34 agis_ddmendpoints.agis.ALL.json
[2025-06-06 05:36:23] -rw-------. 1 boinc boinc    442958 Jun  6 05:34 log.44871837._086438.job.log.tgz.1
[2025-06-06 05:36:23] -rw-------. 1 boinc boinc        95 Jun  6 05:34 pilot_heartbeat.json
[2025-06-06 05:36:23] -rw-------. 1 boinc boinc      7695 Jun  6 05:35 heartbeat.json
[2025-06-06 05:36:23] -rw-------. 1 boinc boinc      4539 Jun  6 05:35 pilotlog.txt
[2025-06-06 05:36:23] -rw-------. 1 boinc boinc   1760152 Jun  6 05:35 log.44871837._086438.job.log.1
[2025-06-06 05:36:23] -rw-------. 1 boinc boinc       357 Jun  6 05:35 output.list
[2025-06-06 05:36:23] -rw-r--r--. 1 boinc boinc       620 Jun  6 05:35 runtime_log
[2025-06-06 05:36:23] -rw-------. 1 boinc boinc   2222080 Jun  6 05:35 result.tar.gz
[2025-06-06 05:36:23] -rw-r--r--. 1 boinc boinc      8659 Jun  6 05:35 runtime_log.err
[2025-06-06 05:36:23] -rw-------. 1 boinc boinc       658 Jun  6 05:35 rOZMDmFzXe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmmScKDmnpScMo.diag
[2025-06-06 05:36:23] -rw-r--r--. 1 boinc boinc      8192 Jun  6 05:36 boinc_mmap_file
[2025-06-06 05:36:23] -rw-r--r--. 1 boinc boinc        28 Jun  6 05:36 wrapper_checkpoint.txt
[2025-06-06 05:36:23] -rw-r--r--. 1 boinc boinc     20478 Jun  6 05:36 stderr.txt
[2025-06-06 05:36:23] HITS file was successfully produced:
[2025-06-06 05:36:23] -rw-------. 1 boinc boinc 203872704 Jun  6 05:33 shared/HITS.pool.root.1
[2025-06-06 05:36:23]  *** Contents of shared directory: ***
[2025-06-06 05:36:23] total 419628
[2025-06-06 05:36:23] -rw-r--r--. 2 boinc boinc 223069245 Jun  5 23:19 ATLAS.root_0
[2025-06-06 05:36:23] -rw-r--r--. 2 boinc boinc     15093 Jun  5 23:19 start_atlas.sh
[2025-06-06 05:36:23] -rw-r--r--. 2 boinc boinc    508878 Jun  5 23:19 input.tar.gz
[2025-06-06 05:36:23] -rw-------. 1 boinc boinc 203872704 Jun  6 05:33 HITS.pool.root.1
[2025-06-06 05:36:23] -rw-------. 1 boinc boinc   2222080 Jun  6 05:35 result.tar.gz
05:36:25 (8322): run_atlas exited; CPU time 75157.278488
05:36:25 (8322): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN