Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:14:33 (915337): wrapper (7.7.26015): starting
17:14:33 (915337): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 17:14:33] Arguments: --nthreads 8
[2025-06-05 17:14:33] Threads: 8
[2025-06-05 17:14:33] Checking for CVMFS
[2025-06-05 17:14:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 17:14:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 17:14:34] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 17:14:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 17:14:34] 2.12.6.0 2340755 25484 506004 146831 0 600 26910345 32935936 18090 16776704 0 212410185 99.678 176086144 22565 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 17:14:34] CVMFS is ok
[2025-06-05 17:14:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 17:14:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 17:14:34] Further information can be found at the LHC@home message board.
[2025-06-05 17:14:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 17:14:34] Checking for apptainer binary...
[2025-06-05 17:14:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 17:14:34] Running /usr/bin/apptainer --version
[2025-06-05 17:14:34] apptainer version 1.4.1-1.el9
[2025-06-05 17:14:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 17:14:34] c7-7-35.aglt2.org
[2025-06-05 17:14:34] apptainer works
[2025-06-05 17:14:34] Set ATHENA_PROC_NUMBER=8
[2025-06-05 17:14:34] Set ATHENA_CORE_NUMBER=8
[2025-06-05 17:14:34] Starting ATLAS job with PandaID=6671961204
[2025-06-05 17:14:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 18:28:58]  *** The last 200 lines of the pilot log: ***
[2025-06-05 18:28:58]  status=None
[2025-06-05 18:28:58]  status_code=0
[2025-06-05 18:28:58]  storage_token=
[2025-06-05 18:28:58]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6671961204/log.44871837._100692.job.log.tgz.1
[2025-06-05 18:28:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/18/c7/log.44871837._100692.job.log.tgz.1
[2025-06-05 18:28:58]  workdir=None
[2025-06-05 18:28:58] ]
[2025-06-05 18:28:58] 2025-06-05 22:28:35,596 | INFO     | transferring file log.44871837._100692.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6671961204/log.44871837._100692.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 18:28:58] 2025-06-05 22:28:35,596 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6671961204/log.44871837._100692.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._100692.job
[2025-06-05 18:28:58] 2025-06-05 22:28:35,609 | INFO     | adding to output.list: log.44871837._100692.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/18/c7/log.44871837._100692.job.log.tg
[2025-06-05 18:28:58] 2025-06-05 22:28:35,610 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 18:28:58] 2025-06-05 22:28:35,610 | INFO     | summary of transferred files:
[2025-06-05 18:28:58] 2025-06-05 22:28:35,610 | INFO     |  -- lfn=log.44871837._100692.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 18:28:58] 2025-06-05 22:28:35,610 | INFO     | stage-out finished correctly
[2025-06-05 18:28:58] 2025-06-05 22:28:35,648 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 18:28:58] 2025-06-05 22:28:35,714 | INFO     | job 6671961204 has state=finished
[2025-06-05 18:28:58] 2025-06-05 22:28:35,714 | INFO     | preparing for final server update for job 6671961204 in state='finished'
[2025-06-05 18:28:58] 2025-06-05 22:28:35,715 | INFO     | this job has now completed (state=finished)
[2025-06-05 18:28:58] 2025-06-05 22:28:35,715 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 18:28:58] 2025-06-05 22:28:35,715 | INFO     | log transfer has been attempted: DONE
[2025-06-05 18:28:58] 2025-06-05 22:28:35,715 | INFO     | job 6671961204 has finished - writing final server update
[2025-06-05 18:28:58] 2025-06-05 22:28:35,715 | INFO     | total number of processed events: 400 (read)
[2025-06-05 18:28:58] 2025-06-05 22:28:35,733 | INFO     | executing command: lscpu
[2025-06-05 18:28:58] 2025-06-05 22:28:35,816 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 18:28:58] 2025-06-05 22:28:36,936 | INFO     | 4433s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-05 18:28:58] 2025-06-05 22:28:38,481 | WARNING  | process 926040 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 18:28:58] 2025-06-05 22:28:38,482 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6671961204/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 18:28:58] 2025-06-05 22:28:38,483 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6671961204/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 18:28:58] 2025-06-05 22:28:38,484 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3258631 B
[2025-06-05 18:28:58] 2025-06-05 22:28:38,484 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15546 B
[2025-06-05 18:28:58] 2025-06-05 22:28:38,484 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 18:28:58] 2025-06-05 22:28:39,132 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 18:28:58] 2025-06-05 22:28:39,133 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6671961204/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 18:28:58] 2025-06-05 22:28:39,139 | INFO     | extracted standard info from prmon json
[2025-06-05 18:28:58] 2025-06-05 22:28:39,139 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 18:28:58] 2025-06-05 22:28:39,140 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 18:28:58] 2025-06-05 22:28:39,140 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 18:28:58] 2025-06-05 22:28:39,140 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 18:28:58] 2025-06-05 22:28:39,142 | INFO     | fitting pss+swap vs Time
[2025-06-05 18:28:58] 2025-06-05 22:28:39,143 | INFO     | sum of square deviations: 89127252.5
[2025-06-05 18:28:58] 2025-06-05 22:28:39,143 | INFO     | sum of deviations: -11688026817.000002
[2025-06-05 18:28:58] 2025-06-05 22:28:39,143 | INFO     | mean x: 1749160397.5
[2025-06-05 18:28:58] 2025-06-05 22:28:39,143 | INFO     | mean y: 2522893.5757575757
[2025-06-05 18:28:58] 2025-06-05 22:28:39,143 | INFO     | -- intersect: 229385041256.4568
[2025-06-05 18:28:58] 2025-06-05 22:28:39,143 | INFO     | intersect: 229385041256.4568
[2025-06-05 18:28:58] 2025-06-05 22:28:39,143 | INFO     | chi2: 0.17599612282841473
[2025-06-05 18:28:58] 2025-06-05 22:28:39,143 | INFO     | -- intersect: 229385041256.4568
[2025-06-05 18:28:58] 2025-06-05 22:28:39,143 | INFO     | current memory leak: -131.14 B/s (using 66 data points, chi2=0.18)
[2025-06-05 18:28:58] 2025-06-05 22:28:39,144 | INFO     | ..............................
[2025-06-05 18:28:58] 2025-06-05 22:28:39,145 | INFO     | . Timing measurements:
[2025-06-05 18:28:58] 2025-06-05 22:28:39,145 | INFO     | . get job = 0 s
[2025-06-05 18:28:58] 2025-06-05 22:28:39,145 | INFO     | . initial setup = 2 s
[2025-06-05 18:28:58] 2025-06-05 22:28:39,145 | INFO     | . payload setup = 5 s
[2025-06-05 18:28:58] 2025-06-05 22:28:39,145 | INFO     | . stage-in = 0 s
[2025-06-05 18:28:58] 2025-06-05 22:28:39,145 | INFO     | . payload execution = 4408 s
[2025-06-05 18:28:58] 2025-06-05 22:28:39,145 | INFO     | . stage-out = 0 s
[2025-06-05 18:28:58] 2025-06-05 22:28:39,145 | INFO     | . log creation = 0 s
[2025-06-05 18:28:58] 2025-06-05 22:28:39,145 | INFO     | ..............................
[2025-06-05 18:28:58] 2025-06-05 22:28:39,183 | INFO     | sufficient remaining disk space (76610011136 B)
[2025-06-05 18:28:58] 2025-06-05 22:28:39,190 | INFO     | 
[2025-06-05 18:28:58] 2025-06-05 22:28:39,190 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-05 18:28:58] 2025-06-05 22:28:39,191 | INFO     | job summary report
[2025-06-05 18:28:58] 2025-06-05 22:28:39,191 | INFO     | --------------------------------------------------
[2025-06-05 18:28:58] 2025-06-05 22:28:39,191 | INFO     | PanDA job id: 6671961204
[2025-06-05 18:28:58] 2025-06-05 22:28:39,191 | INFO     | task id: 44871837
[2025-06-05 18:28:58] 2025-06-05 22:28:39,192 | INFO     | errors: (none)
[2025-06-05 18:28:58] 2025-06-05 22:28:39,192 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 18:28:58] 2025-06-05 22:28:39,192 | INFO     | pilot state: finished 
[2025-06-05 18:28:58] 2025-06-05 22:28:39,192 | INFO     | transexitcode: 0
[2025-06-05 18:28:58] 2025-06-05 22:28:39,192 | INFO     | exeerrorcode: 0
[2025-06-05 18:28:58] 2025-06-05 22:28:39,192 | INFO     | exeerrordiag: 
[2025-06-05 18:28:58] 2025-06-05 22:28:39,193 | INFO     | exitcode: 0
[2025-06-05 18:28:58] 2025-06-05 22:28:39,193 | INFO     | exitmsg: OK
[2025-06-05 18:28:58] 2025-06-05 22:28:39,193 | INFO     | cpuconsumptiontime: 32624 s
[2025-06-05 18:28:58] 2025-06-05 22:28:39,193 | INFO     | nevents: 400
[2025-06-05 18:28:58] 2025-06-05 22:28:39,193 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6671961204: 3556381 B (within 2537553920 B limit)
[2025-06-05 18:28:58] 2025-06-05 22:28:39,193 | INFO     | neventsw: 0
[2025-06-05 18:28:58] 2025-06-05 22:28:39,194 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6671961204/HITS.44871837._100692.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-05 18:28:58] 2025-06-05 22:28:39,194 | INFO     | pid: 926040
[2025-06-05 18:28:58] 2025-06-05 22:28:39,194 | INFO     | total size of present files: 0 B (workdir size: 3556381 B)
[2025-06-05 18:28:58] 2025-06-05 22:28:39,194 | INFO     | pgrp: 926040
[2025-06-05 18:28:58] 2025-06-05 22:28:39,194 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6671961204/HITS.44871837._100692.pool.root.1 since it does not exist
[2025-06-05 18:28:58] 2025-06-05 22:28:39,194 | INFO     | corecount: 8
[2025-06-05 18:28:58] 2025-06-05 22:28:39,195 | INFO     | event service: False
[2025-06-05 18:28:58] 2025-06-05 22:28:39,195 | INFO     | sizes: {0: 2397342, 3: 2397548, 11: 2397576, 4414: 2423615, 4415: 2432612, 4418: 2432726}
[2025-06-05 18:28:58] 2025-06-05 22:28:39,195 | INFO     | --------------------------------------------------
[2025-06-05 18:28:58] 2025-06-05 22:28:39,195 | INFO     | 
[2025-06-05 18:28:58] 2025-06-05 22:28:39,195 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 18:28:58] 2025-06-05 22:28:39,216 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 18:28:58] 2025-06-05 22:28:39,217 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 18:28:58] 2025-06-05 22:28:39,217 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 18:28:58] 2025-06-05 22:28:39,217 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 18:28:58] 2025-06-05 22:28:39,217 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 18:28:58] 2025-06-05 22:28:39,217 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 18:28:58] 2025-06-05 22:28:39,217 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 18:28:58] 2025-06-05 22:28:39,217 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 18:28:58] 2025-06-05 22:28:39,217 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 18:28:58] 2025-06-05 22:28:39,217 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 18:28:58] 2025-06-05 22:28:39,218 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 18:28:58] 2025-06-05 22:28:39,218 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 18:28:58] 2025-06-05 22:28:39,218 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 18:28:58] 2025-06-05 22:28:39,218 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 18:28:58] 2025-06-05 22:28:39,218 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 18:28:58] 2025-06-05 22:28:39,218 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 18:28:58] 2025-06-05 22:28:39,218 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 18:28:58] 2025-06-05 22:28:39,218 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 18:28:58] 2025-06-05 22:28:39,218 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 18:28:58] 2025-06-05 22:28:39,219 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 18:28:58] 2025-06-05 22:28:39,219 | INFO     | job 6671961204 has completed (purged errors)
[2025-06-05 18:28:58] 2025-06-05 22:28:39,219 | INFO     | overall cleanup function is called
[2025-06-05 18:28:58] 2025-06-05 22:28:39,477 | INFO     | number of running child processes to parent process 926040: 1
[2025-06-05 18:28:58] 2025-06-05 22:28:39,478 | INFO     | maximum number of monitored processes: 6
[2025-06-05 18:28:58] 2025-06-05 22:28:39,478 | INFO     | aborting job monitoring since job object (job id=6671961204) has expired
[2025-06-05 18:28:58] 2025-06-05 22:28:40,225 | INFO     | --- collectZombieJob: --- 10, [926040]
[2025-06-05 18:28:58] 2025-06-05 22:28:40,226 | INFO     | zombie collector waiting for pid 926040
[2025-06-05 18:28:58] 2025-06-05 22:28:40,226 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 18:28:58] 2025-06-05 22:28:40,226 | INFO     | collected zombie processes
[2025-06-05 18:28:58] 2025-06-05 22:28:40,226 | INFO     | will attempt to kill all subprocesses of pid=926040
[2025-06-05 18:28:58] 2025-06-05 22:28:40,584 | INFO     | process IDs to be killed: [926040] (in reverse order)
[2025-06-05 18:28:58] 2025-06-05 22:28:40,690 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 18:28:58] 2025-06-05 22:28:40,690 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 18:28:58] 2025-06-05 22:28:40,705 | INFO     | did not find any defunct processes belonging to 926040
[2025-06-05 18:28:58] 2025-06-05 22:28:40,719 | INFO     | did not find any defunct processes belonging to 926040
[2025-06-05 18:28:58] 2025-06-05 22:28:40,719 | INFO     | ready for new job
[2025-06-05 18:28:58] 2025-06-05 22:28:40,719 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 18:28:58] 2025-06-05 22:28:40,720 | INFO     | **************************************
[2025-06-05 18:28:58] 2025-06-05 22:28:40,720 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 18:28:58] 2025-06-05 22:28:40,721 | INFO     | **************************************
[2025-06-05 18:28:58] 2025-06-05 22:28:40,721 | INFO     | 
[2025-06-05 18:28:58] 2025-06-05 22:28:40,738 | INFO     | architecture information:
[2025-06-05 18:28:58] 2025-06-05 22:28:40,739 | INFO     | executing command: cat /etc/os-release
[2025-06-05 18:28:58] 2025-06-05 22:28:40,756 | INFO     | cat /etc/os-release:
[2025-06-05 18:28:58] NAME="CentOS Linux"
[2025-06-05 18:28:58] VERSION="7 (Core)"
[2025-06-05 18:28:58] ID="centos"
[2025-06-05 18:28:58] ID_LIKE="rhel fedora"
[2025-06-05 18:28:58] VERSION_ID="7"
[2025-06-05 18:28:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 18:28:58] ANSI_COLOR="0;31"
[2025-06-05 18:28:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 18:28:58] HOME_URL="https://www.centos.org/"
[2025-06-05 18:28:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 18:28:58] 
[2025-06-05 18:28:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 18:28:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 18:28:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 18:28:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 18:28:58] 
[2025-06-05 18:28:58] 2025-06-05 22:28:40,756 | INFO     | **************************************
[2025-06-05 18:28:58] 2025-06-05 22:28:41,259 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 18:28:58] 2025-06-05 22:28:41,271 | INFO     | sufficient remaining disk space (76614205440 B)
[2025-06-05 18:28:58] 2025-06-05 22:28:41,271 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 18:28:58] 2025-06-05 22:28:41,271 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 18:28:58] 2025-06-05 22:28:41,271 | INFO     | update_server=False
[2025-06-05 18:28:58] 2025-06-05 22:28:41,272 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 18:28:58] 2025-06-05 22:28:41,272 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 18:28:58] 2025-06-05 22:28:41,272 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 18:28:58] 2025-06-05 22:28:41,272 | INFO     | aborting loop
[2025-06-05 18:28:58] 2025-06-05 22:28:41,720 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 18:28:58] 2025-06-05 22:28:41,910 | INFO     | all payload control threads have been joined
[2025-06-05 18:28:58] 2025-06-05 22:28:41,924 | INFO     | all data control threads have been joined
[2025-06-05 18:28:58] 2025-06-05 22:28:41,952 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 18:28:58] 2025-06-05 22:28:41,952 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 18:28:58] 2025-06-05 22:28:41,952 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 18:28:58] 2025-06-05 22:28:42,111 | INFO     | all job control threads have been joined
[2025-06-05 18:28:58] 2025-06-05 22:28:42,276 | INFO     | [job] retrieve thread has finished
[2025-06-05 18:28:58] 2025-06-05 22:28:42,277 | INFO     | [job] job monitor thread has finished
[2025-06-05 18:28:58] 2025-06-05 22:28:42,404 | INFO     | [payload] validate_post thread has finished
[2025-06-05 18:28:58] 2025-06-05 22:28:42,778 | INFO     | [payload] failed_post thread has finished
[2025-06-05 18:28:58] 2025-06-05 22:28:42,915 | INFO     | [payload] control thread has finished
[2025-06-05 18:28:58] 2025-06-05 22:28:42,924 | INFO     | [data] control thread has finished
[2025-06-05 18:28:58] 2025-06-05 22:28:42,949 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 18:28:58] 2025-06-05 22:28:42,954 | INFO     | [job] validate thread has finished
[2025-06-05 18:28:58] 2025-06-05 22:28:43,117 | INFO     | [job] control thread has finished
[2025-06-05 18:28:58] 2025-06-05 22:28:43,277 | INFO     | [data] copytool_out thread has finished
[2025-06-05 18:28:58] 2025-06-05 22:28:43,421 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 18:28:58] 2025-06-05 22:28:43,434 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 18:28:58] 2025-06-05 22:28:43,756 | INFO     | [data] copytool_in thread has finished
[2025-06-05 18:28:58] 2025-06-05 22:28:44,193 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 18:28:58] 2025-06-05 22:28:45,199 | INFO     | [job] queue monitor thread has finished
[2025-06-05 18:28:58] 2025-06-05 22:28:45,721 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 18:28:58] 2025-06-05 22:28:51,332 | INFO     | job.realtimelogging is not enabled
[2025-06-05 18:28:58] 2025-06-05 22:28:52,338 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 18:28:58] 2025-06-05 22:28:52,758 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139915861997376)>', '<ExcThread(monitor, started 139915354412800)>']
[2025-06-05 18:28:58] 2025-06-05 22:28:53,002 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 18:28:58] 2025-06-05 22:28:53,003 | INFO     | [monitor] control thread has ended
[2025-06-05 18:28:58] 2025-06-05 22:28:57,782 | INFO     | all workflow threads have been joined
[2025-06-05 18:28:58] 2025-06-05 22:28:57,783 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 18:28:58] 2025-06-05 22:28:57,783 | INFO     | traces error code: 0
[2025-06-05 18:28:58] 2025-06-05 22:28:57,783 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 18:28:58] 2025-06-05 22:28:57,906 [wrapper] ==== pilot stdout END ====
[2025-06-05 18:28:58] 2025-06-05 22:28:57,908 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 18:28:58] 2025-06-05 22:28:57,910 [wrapper] pilotpid: 919415
[2025-06-05 18:28:58] 2025-06-05 22:28:57,911 [wrapper] Pilot exit status: 0
[2025-06-05 18:28:58] 2025-06-05 22:28:57,919 [wrapper] pandaids: 6671961204
[2025-06-05 18:28:58] 2025-06-05 22:28:57,981 [wrapper] cleanup supervisor_pilot 1183139 919416
[2025-06-05 18:28:58] 2025-06-05 22:28:57,983 [wrapper] Test setup, not cleaning
[2025-06-05 18:28:58] 2025-06-05 22:28:57,985 [wrapper] apfmon messages muted
[2025-06-05 18:28:58] 2025-06-05 22:28:57,987 [wrapper] ==== wrapper stdout END ====
[2025-06-05 18:28:58] 2025-06-05 22:28:57,988 [wrapper] ==== wrapper stderr END ====
[2025-06-05 18:28:58]  *** Error codes and diagnostics ***
[2025-06-05 18:28:58]     "exeErrorCode": 0,
[2025-06-05 18:28:58]     "exeErrorDiag": "",
[2025-06-05 18:28:58]     "pilotErrorCode": 0,
[2025-06-05 18:28:58]     "pilotErrorDiag": "",
[2025-06-05 18:28:58]  *** Listing of results directory ***
[2025-06-05 18:28:58] total 419056
[2025-06-05 18:28:58] -rw-r--r--. 1 boincer umatlas    495897 May 29 09:13 pilot3.tar.gz
[2025-06-05 18:28:58] -rw-r--r--. 1 boincer umatlas      5111 May 29 09:13 queuedata.json
[2025-06-05 18:28:58] -rwx------. 1 boincer umatlas     37140 May 29 09:14 runpilot2-wrapper.sh
[2025-06-05 18:28:58] -rw-r--r--. 1 boincer umatlas       100 Jun  5 17:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 18:28:58] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 17:14 run_atlas
[2025-06-05 18:28:58] -rw-r--r--. 1 boincer umatlas       105 Jun  5 17:14 job.xml
[2025-06-05 18:28:58] -rw-r--r--. 2 boincer umatlas 224512755 Jun  5 17:14 EVNT.44871834._003021.pool.root.1
[2025-06-05 18:28:58] -rw-r--r--. 2 boincer umatlas    508883 Jun  5 17:14 input.tar.gz
[2025-06-05 18:28:58] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 17:14 start_atlas.sh
[2025-06-05 18:28:58] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 17:14 shared
[2025-06-05 18:28:58] -rw-r--r--. 1 boincer umatlas         0 Jun  5 17:14 boinc_lockfile
[2025-06-05 18:28:58] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 17:14 pandaJob.out
[2025-06-05 18:28:58] -rw-------. 1 boincer umatlas    987599 Jun  5 17:14 agis_schedconf.cvmfs.json
[2025-06-05 18:28:58] -rw-------. 1 boincer umatlas   1598969 Jun  5 17:14 agis_ddmendpoints.agis.ALL.json
[2025-06-05 18:28:58] drwx------. 4 boincer umatlas      4096 Jun  5 17:14 pilot3
[2025-06-05 18:28:58] -rw-r--r--. 1 boincer umatlas      6933 Jun  5 18:19 init_data.xml
[2025-06-05 18:28:58] -rw-------. 1 boincer umatlas 199292337 Jun  5 18:28 HITS.44871837._100692.pool.root.1
[2025-06-05 18:28:58] -rw-------. 1 boincer umatlas        95 Jun  5 18:28 pilot_heartbeat.json
[2025-06-05 18:28:58] -rw-r--r--. 1 boincer umatlas       529 Jun  5 18:28 boinc_task_state.xml
[2025-06-05 18:28:58] -rw-------. 1 boincer umatlas      1034 Jun  5 18:28 memory_monitor_summary.json
[2025-06-05 18:28:58] -rw-------. 1 boincer umatlas    301260 Jun  5 18:28 log.44871837._100692.job.log.tgz.1
[2025-06-05 18:28:58] -rw-------. 1 boincer umatlas      7691 Jun  5 18:28 heartbeat.json
[2025-06-05 18:28:58] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 18:28 boinc_mmap_file
[2025-06-05 18:28:58] -rw-r--r--. 1 boincer umatlas        27 Jun  5 18:28 wrapper_checkpoint.txt
[2025-06-05 18:28:58] -rw-------. 1 boincer umatlas      4425 Jun  5 18:28 pilotlog.txt
[2025-06-05 18:28:58] -rw-------. 1 boincer umatlas    438301 Jun  5 18:28 log.44871837._100692.job.log.1
[2025-06-05 18:28:58] -rw-------. 1 boincer umatlas       357 Jun  5 18:28 output.list
[2025-06-05 18:28:58] -rw-r--r--. 1 boincer umatlas       620 Jun  5 18:28 runtime_log
[2025-06-05 18:28:58] -rw-------. 1 boincer umatlas    757760 Jun  5 18:28 result.tar.gz
[2025-06-05 18:28:58] -rw-r--r--. 1 boincer umatlas      8654 Jun  5 18:28 runtime_log.err
[2025-06-05 18:28:58] -rw-------. 1 boincer umatlas       652 Jun  5 18:28 hrOODmKGse7n9Rq4apOajLDm4fhM0noT9bVof3QYDmRGVKDmnKegvn.diag
[2025-06-05 18:28:58] -rw-r--r--. 1 boincer umatlas     22190 Jun  5 18:28 stderr.txt
[2025-06-05 18:28:58] HITS file was successfully produced:
[2025-06-05 18:28:58] -rw-------. 1 boincer umatlas 199292337 Jun  5 18:28 shared/HITS.pool.root.1
[2025-06-05 18:28:58]  *** Contents of shared directory: ***
[2025-06-05 18:28:58] total 415132
[2025-06-05 18:28:58] -rw-r--r--. 2 boincer umatlas 224512755 Jun  5 17:14 ATLAS.root_0
[2025-06-05 18:28:58] -rw-r--r--. 2 boincer umatlas    508883 Jun  5 17:14 input.tar.gz
[2025-06-05 18:28:58] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 17:14 start_atlas.sh
[2025-06-05 18:28:58] -rw-------. 1 boincer umatlas 199292337 Jun  5 18:28 HITS.pool.root.1
[2025-06-05 18:28:58] -rw-------. 1 boincer umatlas    757760 Jun  5 18:28 result.tar.gz
18:28:59 (915337): run_atlas exited; CPU time 32756.516896
18:28:59 (915337): called boinc_finish(0)

</stderr_txt>
]]>

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