Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:05:14 (1161799): wrapper (7.7.26015): starting
17:05:14 (1161799): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 17:05:14] Arguments: --nthreads 12
[2025-06-05 17:05:14] Threads: 12
[2025-06-05 17:05:14] Checking for CVMFS
[2025-06-05 17:05:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 17:05:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 17:05:14] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 17:05:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 17:05:14] 2.12.6.0 2658689 25228 525788 146831 1 412 32661446 32935936 12740 16776704 1 99356084 99.580 124502172 34187 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 17:05:14] CVMFS is ok
[2025-06-05 17:05:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 17:05:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 17:05:14] Further information can be found at the LHC@home message board.
[2025-06-05 17:05:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 17:05:14] Checking for apptainer binary...
[2025-06-05 17:05:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 17:05:14] Running /usr/bin/apptainer --version
[2025-06-05 17:05:14] apptainer version 1.4.1-1.el9
[2025-06-05 17:05:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 17:05:14] c6-5-7-2.aglt2.org
[2025-06-05 17:05:14] apptainer works
[2025-06-05 17:05:14] Set ATHENA_PROC_NUMBER=12
[2025-06-05 17:05:14] Set ATHENA_CORE_NUMBER=12
[2025-06-05 17:05:14] Starting ATLAS job with PandaID=6668686865
[2025-06-05 17:05:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 19:10:28]  *** The last 200 lines of the pilot log: ***
[2025-06-05 19:10:28] 2025-06-05 23:10:16,083 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 19:10:28] 2025-06-05 23:10:16,089 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 19:10:28] 2025-06-05 23:10:16,089 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 19:10:28] 2025-06-05 23:10:16,092 | INFO     | fitting pss+swap vs Time
[2025-06-05 19:10:28] 2025-06-05 23:10:16,092 | INFO     | sum of square deviations: 577028051.918698
[2025-06-05 19:10:28] 2025-06-05 23:10:16,106 | INFO     | sum of deviations: 7850194328.260167
[2025-06-05 19:10:28] 2025-06-05 23:10:16,106 | INFO     | mean x: 1749161274.1300814
[2025-06-05 19:10:28] 2025-06-05 23:10:16,106 | INFO     | mean y: 2310143.9837398375
[2025-06-05 19:10:28] 2025-06-05 23:10:16,106 | INFO     | -- intersect: -23794203505.10138
[2025-06-05 19:10:28] 2025-06-05 23:10:16,106 | INFO     | intersect: -23794203505.10138
[2025-06-05 19:10:28] 2025-06-05 23:10:16,107 | INFO     | chi2: 2.155197352291154
[2025-06-05 19:10:28] 2025-06-05 23:10:16,107 | INFO     | sum of square deviations: 509487479.3305086
[2025-06-05 19:10:28] 2025-06-05 23:10:16,108 | INFO     | sum of deviations: 16085010978.610167
[2025-06-05 19:10:28] 2025-06-05 23:10:16,108 | INFO     | mean x: 1749161121.6355932
[2025-06-05 19:10:28] 2025-06-05 23:10:16,108 | INFO     | mean y: 2328244.7118644067
[2025-06-05 19:10:28] 2025-06-05 23:10:16,108 | INFO     | -- intersect: -55220374935.03598
[2025-06-05 19:10:28] 2025-06-05 23:10:16,108 | INFO     | intersect: -55220374935.03598
[2025-06-05 19:10:28] 2025-06-05 23:10:16,108 | INFO     | chi2: 1.4791088029244608
[2025-06-05 19:10:28] 2025-06-05 23:10:16,108 | INFO     | current chi2=1.4791088029244608 (change=31.370145692131384 %)
[2025-06-05 19:10:28] 2025-06-05 23:10:16,109 | INFO     | sum of square deviations: 447413785.5044256
[2025-06-05 19:10:28] 2025-06-05 23:10:16,109 | INFO     | sum of deviations: 15943078303.07965
[2025-06-05 19:10:28] 2025-06-05 23:10:16,127 | INFO     | mean x: 1749160969.1150444
[2025-06-05 19:10:28] 2025-06-05 23:10:16,127 | INFO     | mean y: 2327868.0707964604
[2025-06-05 19:10:28] 2025-06-05 23:10:16,127 | INFO     | -- intersect: -62327021827.42713
[2025-06-05 19:10:28] 2025-06-05 23:10:16,127 | INFO     | intersect: -62327021827.42713
[2025-06-05 19:10:28] 2025-06-05 23:10:16,127 | INFO     | chi2: 1.477133224594414
[2025-06-05 19:10:28] 2025-06-05 23:10:16,128 | INFO     | current chi2=1.477133224594414 (change=0.13356545009675636 %)
[2025-06-05 19:10:28] 2025-06-05 23:10:16,128 | INFO     | right removable region: 112
[2025-06-05 19:10:28] 2025-06-05 23:10:16,128 | INFO     | sum of square deviations: 509477719.3305086
[2025-06-05 19:10:28] 2025-06-05 23:10:16,129 | INFO     | sum of deviations: -9978786170.37288
[2025-06-05 19:10:28] 2025-06-05 23:10:16,129 | INFO     | mean x: 1749161426.6355932
[2025-06-05 19:10:28] 2025-06-05 23:10:16,129 | INFO     | mean y: 2349781.8983050846
[2025-06-05 19:10:28] 2025-06-05 23:10:16,129 | INFO     | -- intersect: 34261959557.9597
[2025-06-05 19:10:28] 2025-06-05 23:10:16,129 | INFO     | intersect: 34261959557.9597
[2025-06-05 19:10:28] 2025-06-05 23:10:16,129 | INFO     | chi2: 0.7701879201921354
[2025-06-05 19:10:28] 2025-06-05 23:10:16,129 | INFO     | current chi2=0.7701879201921354 (change=64.26369402443069 %)
[2025-06-05 19:10:28] 2025-06-05 23:10:16,130 | INFO     | sum of square deviations: 447415861.73451203
[2025-06-05 19:10:28] 2025-06-05 23:10:16,130 | INFO     | sum of deviations: -8014774080.575221
[2025-06-05 19:10:28] 2025-06-05 23:10:16,130 | INFO     | mean x: 1749161579.141593
[2025-06-05 19:10:28] 2025-06-05 23:10:16,130 | INFO     | mean y: 2344777.9734513275
[2025-06-05 19:10:28] 2025-06-05 23:10:16,131 | INFO     | -- intersect: 31335911792.99526
[2025-06-05 19:10:28] 2025-06-05 23:10:16,131 | INFO     | intersect: 31335911792.99526
[2025-06-05 19:10:28] 2025-06-05 23:10:16,131 | INFO     | chi2: 0.7255989228277427
[2025-06-05 19:10:28] 2025-06-05 23:10:16,131 | INFO     | current chi2=0.7255989228277427 (change=5.789365971004749 %)
[2025-06-05 19:10:28] 2025-06-05 23:10:16,131 | INFO     | left removable region: 20
[2025-06-05 19:10:28] 2025-06-05 23:10:16,138 | INFO     | sum of square deviations: 241451859.43478242
[2025-06-05 19:10:28] 2025-06-05 23:10:16,139 | INFO     | sum of deviations: -1200788141.9565217
[2025-06-05 19:10:28] 2025-06-05 23:10:16,139 | INFO     | mean x: 1749161548.6304348
[2025-06-05 19:10:28] 2025-06-05 23:10:16,139 | INFO     | mean y: 2373452.413043478
[2025-06-05 19:10:28] 2025-06-05 23:10:16,140 | INFO     | -- intersect: 8701301888.410677
[2025-06-05 19:10:28] 2025-06-05 23:10:16,140 | INFO     | intersect: 8701301888.410677
[2025-06-05 19:10:28] 2025-06-05 23:10:16,140 | INFO     | chi2: 0.01540755269971189
[2025-06-05 19:10:28] 2025-06-05 23:10:16,140 | INFO     | -- intersect: 8701301888.410677
[2025-06-05 19:10:28] 2025-06-05 23:10:16,140 | INFO     | current memory leak: -4.97 B/s (using 92 data points, chi2=0.02)
[2025-06-05 19:10:28] 2025-06-05 23:10:16,141 | INFO     | ..............................
[2025-06-05 19:10:28] 2025-06-05 23:10:16,141 | INFO     | . Timing measurements:
[2025-06-05 19:10:28] 2025-06-05 23:10:16,141 | INFO     | . get job = 0 s
[2025-06-05 19:10:28] 2025-06-05 23:10:16,141 | INFO     | . initial setup = 2 s
[2025-06-05 19:10:28] 2025-06-05 23:10:16,141 | INFO     | . payload setup = 7 s
[2025-06-05 19:10:28] 2025-06-05 23:10:16,141 | INFO     | . stage-in = 0 s
[2025-06-05 19:10:28] 2025-06-05 23:10:16,141 | INFO     | . payload execution = 7449 s
[2025-06-05 19:10:28] 2025-06-05 23:10:16,141 | INFO     | . stage-out = 1 s
[2025-06-05 19:10:28] 2025-06-05 23:10:16,141 | INFO     | . log creation = 0 s
[2025-06-05 19:10:28] 2025-06-05 23:10:16,141 | INFO     | ..............................
[2025-06-05 19:10:28] 2025-06-05 23:10:16,291 | INFO     | 
[2025-06-05 19:10:28] 2025-06-05 23:10:16,292 | INFO     | job summary report
[2025-06-05 19:10:28] 2025-06-05 23:10:16,292 | INFO     | --------------------------------------------------
[2025-06-05 19:10:28] 2025-06-05 23:10:16,292 | INFO     | PanDA job id: 6668686865
[2025-06-05 19:10:28] 2025-06-05 23:10:16,292 | INFO     | task id: 44871837
[2025-06-05 19:10:28] 2025-06-05 23:10:16,292 | INFO     | errors: (none)
[2025-06-05 19:10:28] 2025-06-05 23:10:16,292 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 19:10:28] 2025-06-05 23:10:16,292 | INFO     | pilot state: finished 
[2025-06-05 19:10:28] 2025-06-05 23:10:16,292 | INFO     | transexitcode: 0
[2025-06-05 19:10:28] 2025-06-05 23:10:16,292 | INFO     | exeerrorcode: 0
[2025-06-05 19:10:28] 2025-06-05 23:10:16,292 | INFO     | exeerrordiag: 
[2025-06-05 19:10:28] 2025-06-05 23:10:16,292 | INFO     | exitcode: 0
[2025-06-05 19:10:28] 2025-06-05 23:10:16,292 | INFO     | exitmsg: OK
[2025-06-05 19:10:28] 2025-06-05 23:10:16,292 | INFO     | cpuconsumptiontime: 50826 s
[2025-06-05 19:10:28] 2025-06-05 23:10:16,293 | INFO     | nevents: 400
[2025-06-05 19:10:28] 2025-06-05 23:10:16,293 | INFO     | neventsw: 0
[2025-06-05 19:10:28] 2025-06-05 23:10:16,293 | INFO     | pid: 1174476
[2025-06-05 19:10:28] 2025-06-05 23:10:16,293 | INFO     | pgrp: 1174476
[2025-06-05 19:10:28] 2025-06-05 23:10:16,293 | INFO     | corecount: 12
[2025-06-05 19:10:28] 2025-06-05 23:10:16,293 | INFO     | event service: False
[2025-06-05 19:10:28] 2025-06-05 23:10:16,293 | INFO     | sizes: {0: 2397340, 4: 2397546, 11: 2397574, 7460: 2424913, 7461: 2424912, 7463: 2433909, 7466: 2434093, 7475: 2434263}
[2025-06-05 19:10:28] 2025-06-05 23:10:16,293 | INFO     | --------------------------------------------------
[2025-06-05 19:10:28] 2025-06-05 23:10:16,293 | INFO     | 
[2025-06-05 19:10:28] 2025-06-05 23:10:16,293 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 19:10:28] 2025-06-05 23:10:16,340 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 19:10:28] 2025-06-05 23:10:16,340 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 19:10:28] 2025-06-05 23:10:16,340 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 19:10:28] 2025-06-05 23:10:16,340 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 19:10:28] 2025-06-05 23:10:16,340 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 19:10:28] 2025-06-05 23:10:16,340 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 19:10:28] 2025-06-05 23:10:16,341 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 19:10:28] 2025-06-05 23:10:16,341 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 19:10:28] 2025-06-05 23:10:16,341 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 19:10:28] 2025-06-05 23:10:16,341 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 19:10:28] 2025-06-05 23:10:16,341 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 19:10:28] 2025-06-05 23:10:16,341 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 19:10:28] 2025-06-05 23:10:16,341 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 19:10:28] 2025-06-05 23:10:16,341 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 19:10:28] 2025-06-05 23:10:16,341 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 19:10:28] 2025-06-05 23:10:16,341 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 19:10:28] 2025-06-05 23:10:16,341 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 19:10:28] 2025-06-05 23:10:16,341 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 19:10:28] 2025-06-05 23:10:16,341 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 19:10:28] 2025-06-05 23:10:16,342 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 19:10:28] 2025-06-05 23:10:16,342 | INFO     | job 6668686865 has completed (purged errors)
[2025-06-05 19:10:28] 2025-06-05 23:10:16,342 | INFO     | overall cleanup function is called
[2025-06-05 19:10:28] 2025-06-05 23:10:17,357 | INFO     | --- collectZombieJob: --- 10, [1174476]
[2025-06-05 19:10:28] 2025-06-05 23:10:17,358 | INFO     | zombie collector waiting for pid 1174476
[2025-06-05 19:10:28] 2025-06-05 23:10:17,358 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 19:10:28] 2025-06-05 23:10:17,358 | INFO     | collected zombie processes
[2025-06-05 19:10:28] 2025-06-05 23:10:17,359 | INFO     | will attempt to kill all subprocesses of pid=1174476
[2025-06-05 19:10:28] 2025-06-05 23:10:17,699 | INFO     | process IDs to be killed: [1174476] (in reverse order)
[2025-06-05 19:10:28] 2025-06-05 23:10:17,842 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 19:10:28] 2025-06-05 23:10:17,842 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 19:10:28] 2025-06-05 23:10:17,858 | INFO     | did not find any defunct processes belonging to 1174476
[2025-06-05 19:10:28] 2025-06-05 23:10:17,868 | INFO     | did not find any defunct processes belonging to 1174476
[2025-06-05 19:10:28] 2025-06-05 23:10:17,869 | INFO     | ready for new job
[2025-06-05 19:10:28] 2025-06-05 23:10:17,869 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 19:10:28] 2025-06-05 23:10:17,870 | INFO     | **************************************
[2025-06-05 19:10:28] 2025-06-05 23:10:17,871 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 19:10:28] 2025-06-05 23:10:17,871 | INFO     | **************************************
[2025-06-05 19:10:28] 2025-06-05 23:10:17,871 | INFO     | 
[2025-06-05 19:10:28] 2025-06-05 23:10:17,896 | INFO     | architecture information:
[2025-06-05 19:10:28] 2025-06-05 23:10:17,930 | INFO     | executing command: cat /etc/os-release
[2025-06-05 19:10:28] 2025-06-05 23:10:18,011 | INFO     | cat /etc/os-release:
[2025-06-05 19:10:28] NAME="CentOS Linux"
[2025-06-05 19:10:28] VERSION="7 (Core)"
[2025-06-05 19:10:28] ID="centos"
[2025-06-05 19:10:28] ID_LIKE="rhel fedora"
[2025-06-05 19:10:28] VERSION_ID="7"
[2025-06-05 19:10:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 19:10:28] ANSI_COLOR="0;31"
[2025-06-05 19:10:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 19:10:28] HOME_URL="https://www.centos.org/"
[2025-06-05 19:10:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 19:10:28] 
[2025-06-05 19:10:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 19:10:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 19:10:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 19:10:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 19:10:28] 
[2025-06-05 19:10:28] 2025-06-05 23:10:18,012 | INFO     | **************************************
[2025-06-05 19:10:28] 2025-06-05 23:10:18,516 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 19:10:28] 2025-06-05 23:10:18,599 | INFO     | sufficient remaining disk space (76542902272 B)
[2025-06-05 19:10:28] 2025-06-05 23:10:18,599 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 19:10:28] 2025-06-05 23:10:18,600 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 19:10:28] 2025-06-05 23:10:18,600 | INFO     | update_server=False
[2025-06-05 19:10:28] 2025-06-05 23:10:18,600 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 19:10:28] 2025-06-05 23:10:18,600 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 19:10:28] 2025-06-05 23:10:18,765 | INFO     | all payload control threads have been joined
[2025-06-05 19:10:28] 2025-06-05 23:10:18,930 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 19:10:28] 2025-06-05 23:10:18,931 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 19:10:28] 2025-06-05 23:10:18,931 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 19:10:28] 2025-06-05 23:10:18,931 | INFO     | will abort loop
[2025-06-05 19:10:28] 2025-06-05 23:10:19,170 | INFO     | all job control threads have been joined
[2025-06-05 19:10:28] 2025-06-05 23:10:19,346 | INFO     | PID=1167126 has CPU usage=11.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 19:10:28] 2025-06-05 23:10:19,346 | INFO     | .. there are 11 such processes running
[2025-06-05 19:10:28] 2025-06-05 23:10:19,346 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 19:10:28] 2025-06-05 23:10:19,347 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 19:10:28] 2025-06-05 23:10:19,347 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 19:10:28] 2025-06-05 23:10:19,544 | INFO     | all data control threads have been joined
[2025-06-05 19:10:28] 2025-06-05 23:10:19,606 | INFO     | [job] retrieve thread has finished
[2025-06-05 19:10:28] 2025-06-05 23:10:19,621 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 19:10:28] 2025-06-05 23:10:19,649 | INFO     | [job] validate thread has finished
[2025-06-05 19:10:28] 2025-06-05 23:10:19,717 | INFO     | [payload] failed_post thread has finished
[2025-06-05 19:10:28] 2025-06-05 23:10:19,771 | INFO     | [payload] control thread has finished
[2025-06-05 19:10:28] 2025-06-05 23:10:19,811 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 19:10:28] 2025-06-05 23:10:19,937 | INFO     | [job] job monitor thread has finished
[2025-06-05 19:10:28] 2025-06-05 23:10:19,966 | INFO     | [data] copytool_in thread has finished
[2025-06-05 19:10:28] 2025-06-05 23:10:20,177 | INFO     | [job] control thread has finished
[2025-06-05 19:10:28] 2025-06-05 23:10:20,487 | INFO     | [payload] validate_post thread has finished
[2025-06-05 19:10:28] 2025-06-05 23:10:20,550 | INFO     | [data] control thread has finished
[2025-06-05 19:10:28] 2025-06-05 23:10:20,582 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 19:10:28] 2025-06-05 23:10:20,751 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 19:10:28] 2025-06-05 23:10:20,950 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 19:10:28] 2025-06-05 23:10:21,305 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 19:10:28] 2025-06-05 23:10:21,629 | INFO     | [data] copytool_out thread has finished
[2025-06-05 19:10:28] 2025-06-05 23:10:22,311 | INFO     | [job] queue monitor thread has finished
[2025-06-05 19:10:28] 2025-06-05 23:10:22,609 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 19:10:28] 2025-06-05 23:10:23,155 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139752881821504)>', '<ExcThread(monitor, started 139752229549824)>']
[2025-06-05 19:10:28] 2025-06-05 23:10:23,370 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 19:10:28] 2025-06-05 23:10:23,371 | INFO     | [monitor] control thread has ended
[2025-06-05 19:10:28] 2025-06-05 23:10:28,180 | INFO     | all workflow threads have been joined
[2025-06-05 19:10:28] 2025-06-05 23:10:28,180 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 19:10:28] 2025-06-05 23:10:28,181 | INFO     | traces error code: 0
[2025-06-05 19:10:28] 2025-06-05 23:10:28,181 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 19:10:28] 2025-06-05 23:10:28,365 [wrapper] ==== pilot stdout END ====
[2025-06-05 19:10:28] 2025-06-05 23:10:28,384 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 19:10:28] 2025-06-05 23:10:28,391 [wrapper] pilotpid: 1167126
[2025-06-05 19:10:28] 2025-06-05 23:10:28,394 [wrapper] Pilot exit status: 0
[2025-06-05 19:10:28] 2025-06-05 23:10:28,420 [wrapper] pandaids: 6668686865
[2025-06-05 19:10:28] 2025-06-05 23:10:28,520 [wrapper] cleanup supervisor_pilot 1654729 1167127
[2025-06-05 19:10:28] 2025-06-05 23:10:28,527 [wrapper] Test setup, not cleaning
[2025-06-05 19:10:28] 2025-06-05 23:10:28,533 [wrapper] apfmon messages muted
[2025-06-05 19:10:28] 2025-06-05 23:10:28,539 [wrapper] ==== wrapper stdout END ====
[2025-06-05 19:10:28] 2025-06-05 23:10:28,542 [wrapper] ==== wrapper stderr END ====
[2025-06-05 19:10:28]  *** Error codes and diagnostics ***
[2025-06-05 19:10:28]     "exeErrorCode": 0,
[2025-06-05 19:10:28]     "exeErrorDiag": "",
[2025-06-05 19:10:28]     "pilotErrorCode": 0,
[2025-06-05 19:10:28]     "pilotErrorDiag": "",
[2025-06-05 19:10:28]  *** Listing of results directory ***
[2025-06-05 19:10:28] total 419140
[2025-06-05 19:10:28] -rw-r--r--. 1 boincer umatlas    495897 May 28 11:15 pilot3.tar.gz
[2025-06-05 19:10:28] -rw-r--r--. 1 boincer umatlas      5111 May 28 11:20 queuedata.json
[2025-06-05 19:10:28] -rwx------. 1 boincer umatlas     37140 May 28 11:20 runpilot2-wrapper.sh
[2025-06-05 19:10:28] -rw-r--r--. 1 boincer umatlas       100 Jun  5 17:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 19:10:28] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 17:05 run_atlas
[2025-06-05 19:10:28] -rw-r--r--. 1 boincer umatlas       105 Jun  5 17:05 job.xml
[2025-06-05 19:10:28] -rw-r--r--. 2 boincer umatlas 225578000 Jun  5 17:05 EVNT.44871834._000699.pool.root.1
[2025-06-05 19:10:28] -rw-r--r--. 2 boincer umatlas    508877 Jun  5 17:05 input.tar.gz
[2025-06-05 19:10:28] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 17:05 start_atlas.sh
[2025-06-05 19:10:28] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 17:05 shared
[2025-06-05 19:10:28] -rw-r--r--. 1 boincer umatlas         0 Jun  5 17:05 boinc_lockfile
[2025-06-05 19:10:28] -rw-r--r--. 1 boincer umatlas      2558 Jun  5 17:05 pandaJob.out
[2025-06-05 19:10:28] -rw-------. 1 boincer umatlas    987599 Jun  5 17:05 agis_schedconf.cvmfs.json
[2025-06-05 19:10:28] -rw-------. 1 boincer umatlas   1598969 Jun  5 17:05 agis_ddmendpoints.agis.ALL.json
[2025-06-05 19:10:28] drwx------. 4 boincer umatlas      4096 Jun  5 17:05 pilot3
[2025-06-05 19:10:28] -rw-r--r--. 1 boincer umatlas      6842 Jun  5 19:01 init_data.xml
[2025-06-05 19:10:28] -rw-------. 1 boincer umatlas 197649220 Jun  5 19:09 HITS.44871837._086258.pool.root.1
[2025-06-05 19:10:28] -rw-r--r--. 1 boincer umatlas       530 Jun  5 19:09 boinc_task_state.xml
[2025-06-05 19:10:28] -rw-------. 1 boincer umatlas        95 Jun  5 19:09 pilot_heartbeat.json
[2025-06-05 19:10:28] -rw-------. 1 boincer umatlas      1041 Jun  5 19:09 memory_monitor_summary.json
[2025-06-05 19:10:28] -rw-------. 1 boincer umatlas    382673 Jun  5 19:10 log.44871837._086258.job.log.tgz.1
[2025-06-05 19:10:28] -rw-------. 1 boincer umatlas      7718 Jun  5 19:10 heartbeat.json
[2025-06-05 19:10:28] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 19:10 boinc_mmap_file
[2025-06-05 19:10:28] -rw-r--r--. 1 boincer umatlas        27 Jun  5 19:10 wrapper_checkpoint.txt
[2025-06-05 19:10:28] -rw-------. 1 boincer umatlas      4935 Jun  5 19:10 pilotlog.txt
[2025-06-05 19:10:28] -rw-------. 1 boincer umatlas    684141 Jun  5 19:10 log.44871837._086258.job.log.1
[2025-06-05 19:10:28] -rw-------. 1 boincer umatlas       357 Jun  5 19:10 output.list
[2025-06-05 19:10:28] -rw-r--r--. 1 boincer umatlas       620 Jun  5 19:10 runtime_log
[2025-06-05 19:10:28] -rw-------. 1 boincer umatlas   1085440 Jun  5 19:10 result.tar.gz
[2025-06-05 19:10:28] -rw-------. 1 boincer umatlas       653 Jun  5 19:10 shtKDmElXe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm1PcKDm57V4jm.diag
[2025-06-05 19:10:28] -rw-r--r--. 1 boincer umatlas      8661 Jun  5 19:10 runtime_log.err
[2025-06-05 19:10:28] -rw-r--r--. 1 boincer umatlas     20985 Jun  5 19:10 stderr.txt
[2025-06-05 19:10:28] HITS file was successfully produced:
[2025-06-05 19:10:28] -rw-------. 1 boincer umatlas 197649220 Jun  5 19:09 shared/HITS.pool.root.1
[2025-06-05 19:10:28]  *** Contents of shared directory: ***
[2025-06-05 19:10:28] total 414896
[2025-06-05 19:10:28] -rw-r--r--. 2 boincer umatlas 225578000 Jun  5 17:05 ATLAS.root_0
[2025-06-05 19:10:28] -rw-r--r--. 2 boincer umatlas    508877 Jun  5 17:05 input.tar.gz
[2025-06-05 19:10:28] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 17:05 start_atlas.sh
[2025-06-05 19:10:28] -rw-------. 1 boincer umatlas 197649220 Jun  5 19:09 HITS.pool.root.1
[2025-06-05 19:10:28] -rw-------. 1 boincer umatlas   1085440 Jun  5 19:10 result.tar.gz
19:10:29 (1161799): run_atlas exited; CPU time 50948.523601
19:10:29 (1161799): called boinc_finish(0)

</stderr_txt>
]]>

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